DC-Build-Header: insighttoolkit4 4.12.2-dfsg1-1 / 2018-05-02 06:57:11 +0000 DC-Task: type:rebuild-binarch-only source:insighttoolkit4 version:4.12.2-dfsg1-1 chroot:unstable esttime:15004 logfile:/tmp/insighttoolkit4_4.12.2-dfsg1-1_unstable_clang60.log modes:clang60:binarch-only DC-Sbuild-call: su user42 -c 'sbuild -n --arch-any --apt-update -d unstable -v --chroot-setup-commands=/tmp/clang60 insighttoolkit4_4.12.2-dfsg1-1' sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on ip-172-31-13-62.eu-central-1.compute.internal +==============================================================================+ | insighttoolkit4 4.12.2-dfsg1-1 (amd64) Wed, 02 May 2018 06:57:12 +0000 | +==============================================================================+ Package: insighttoolkit4 Version: 4.12.2-dfsg1-1 Source Version: 4.12.2-dfsg1-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-335880cb-1a14-439a-9661-a8906e42ed21' with '<>' +------------------------------------------------------------------------------+ | Chroot Setup Commands | +------------------------------------------------------------------------------+ /tmp/clang60 ------------ + echo 'Entering customization script...' Entering customization script... + CLANG_VERSION=6.0 + echo 'Install of clang-6.0' Install of clang-6.0 + apt-get update Hit:1 http://127.0.0.1:9999/debian unstable InRelease Get:2 http://127.0.0.1:9999/debian unstable/main Translation-en [6014 kB] Fetched 6014 kB in 3s (2232 kB/s) Reading package lists... + apt-get install --yes --no-install-recommends --force-yes clang-6.0 Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-6.0-dev libclang1-6.0 libedit2 libjsoncpp1 libllvm6.0 libncurses5 libobjc-7-dev libobjc4 Suggested packages: gnustep gnustep-devel clang-6.0-doc Recommended packages: llvm-6.0-dev python libomp-dev libgpm2 The following NEW packages will be installed: clang-6.0 lib32gcc1 lib32stdc++6 libbsd0 libc6-i386 libclang-common-6.0-dev libclang1-6.0 libedit2 libjsoncpp1 libllvm6.0 libncurses5 libobjc-7-dev libobjc4 0 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. Need to get 37.7 MB of archives. After this operation, 187 MB of additional disk space will be used. Get:1 http://127.0.0.1:9999/debian unstable/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 libbsd0 amd64 0.8.7-1 [92.1 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 libncurses5 amd64 6.1+20180210-2 [95.7 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libedit2 amd64 3.1-20170329-1 [85.2 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 libllvm6.0 amd64 1:6.0-3 [14.5 MB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libobjc4 amd64 8-20180425-1 [52.4 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 libobjc-7-dev amd64 7.3.0-17 [204 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 libc6-i386 amd64 2.27-3 [2855 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 lib32gcc1 amd64 1:8-20180425-1 [47.8 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 lib32stdc++6 amd64 8-20180425-1 [406 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libclang-common-6.0-dev amd64 1:6.0-3 [3102 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 libclang1-6.0 amd64 1:6.0-3 [6995 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 clang-6.0 amd64 1:6.0-3 [9175 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 37.7 MB in 1s (49.0 MB/s) Selecting previously unselected package libjsoncpp1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10022 files and directories currently installed.) Preparing to unpack .../00-libjsoncpp1_1.7.4-3_amd64.deb ... Unpacking libjsoncpp1:amd64 (1.7.4-3) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../01-libbsd0_0.8.7-1_amd64.deb ... Unpacking libbsd0:amd64 (0.8.7-1) ... Selecting previously unselected package libncurses5:amd64. Preparing to unpack .../02-libncurses5_6.1+20180210-2_amd64.deb ... Unpacking libncurses5:amd64 (6.1+20180210-2) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../03-libedit2_3.1-20170329-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20170329-1) ... Selecting previously unselected package libllvm6.0:amd64. Preparing to unpack .../04-libllvm6.0_1%3a6.0-3_amd64.deb ... Unpacking libllvm6.0:amd64 (1:6.0-3) ... Selecting previously unselected package libobjc4:amd64. Preparing to unpack .../05-libobjc4_8-20180425-1_amd64.deb ... Unpacking libobjc4:amd64 (8-20180425-1) ... Selecting previously unselected package libobjc-7-dev:amd64. Preparing to unpack .../06-libobjc-7-dev_7.3.0-17_amd64.deb ... Unpacking libobjc-7-dev:amd64 (7.3.0-17) ... Selecting previously unselected package libc6-i386. Preparing to unpack .../07-libc6-i386_2.27-3_amd64.deb ... Unpacking libc6-i386 (2.27-3) ... Selecting previously unselected package lib32gcc1. Preparing to unpack .../08-lib32gcc1_1%3a8-20180425-1_amd64.deb ... Unpacking lib32gcc1 (1:8-20180425-1) ... Selecting previously unselected package lib32stdc++6. Preparing to unpack .../09-lib32stdc++6_8-20180425-1_amd64.deb ... Unpacking lib32stdc++6 (8-20180425-1) ... Selecting previously unselected package libclang-common-6.0-dev. Preparing to unpack .../10-libclang-common-6.0-dev_1%3a6.0-3_amd64.deb ... Unpacking libclang-common-6.0-dev (1:6.0-3) ... Selecting previously unselected package libclang1-6.0:amd64. Preparing to unpack .../11-libclang1-6.0_1%3a6.0-3_amd64.deb ... Unpacking libclang1-6.0:amd64 (1:6.0-3) ... Selecting previously unselected package clang-6.0. Preparing to unpack .../12-clang-6.0_1%3a6.0-3_amd64.deb ... Unpacking clang-6.0 (1:6.0-3) ... Setting up libncurses5:amd64 (6.1+20180210-2) ... Setting up libobjc4:amd64 (8-20180425-1) ... Setting up libc6-i386 (2.27-3) ... Setting up libbsd0:amd64 (0.8.7-1) ... Setting up libobjc-7-dev:amd64 (7.3.0-17) ... Processing triggers for libc-bin (2.27-3) ... Setting up lib32gcc1 (1:8-20180425-1) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libedit2:amd64 (3.1-20170329-1) ... Setting up libllvm6.0:amd64 (1:6.0-3) ... Setting up libclang1-6.0:amd64 (1:6.0-3) ... Setting up lib32stdc++6 (8-20180425-1) ... Setting up libclang-common-6.0-dev (1:6.0-3) ... Setting up clang-6.0 (1:6.0-3) ... Processing triggers for libc-bin (2.27-3) ... W: --force-yes is deprecated, use one of the options starting with --allow instead. + echo 'Replace gcc, g++ & cpp by clang' Replace gcc, g++ & cpp by clang + VERSIONS='4.6 4.7 4.8 4.9 5 6 7 8' + cd /usr/bin + for VERSION in $VERSIONS + rm -f g++-4.6 gcc-4.6 cpp-4.6 gcc + ln -s clang++-6.0 g++-4.6 + ln -s clang-6.0 gcc-4.6 + ln -s clang-6.0 cpp-4.6 + ln -s clang-6.0 gcc + echo 'gcc-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.7 gcc-4.7 cpp-4.7 gcc + ln -s clang++-6.0 g++-4.7 + ln -s clang-6.0 gcc-4.7 + ln -s clang-6.0 cpp-4.7 + ln -s clang-6.0 gcc + echo 'gcc-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.7 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.7 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.8 gcc-4.8 cpp-4.8 gcc + ln -s clang++-6.0 g++-4.8 + ln -s clang-6.0 gcc-4.8 + ln -s clang-6.0 cpp-4.8 + ln -s clang-6.0 gcc + echo 'gcc-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.8 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-4.9 gcc-4.9 cpp-4.9 gcc + ln -s clang++-6.0 g++-4.9 + ln -s clang-6.0 gcc-4.9 + ln -s clang-6.0 cpp-4.9 + ln -s clang-6.0 gcc + echo 'gcc-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-4.9 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-4.9 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-5 gcc-5 cpp-5 gcc + ln -s clang++-6.0 g++-5 + ln -s clang-6.0 gcc-5 + ln -s clang-6.0 cpp-5 + ln -s clang-6.0 gcc + echo 'gcc-5 hold' + dpkg --set-selections + echo 'g++-5 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-6 gcc-6 cpp-6 gcc + ln -s clang++-6.0 g++-6 + ln -s clang-6.0 gcc-6 + ln -s clang-6.0 cpp-6 + ln -s clang-6.0 gcc + echo 'gcc-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: gcc-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + echo 'g++-6 hold' + dpkg --set-selections dpkg: warning: package not in status nor available database at line 1: g++-6 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + for VERSION in $VERSIONS + rm -f g++-7 gcc-7 cpp-7 gcc + ln -s clang++-6.0 g++-7 + ln -s clang-6.0 gcc-7 + ln -s clang-6.0 cpp-7 + ln -s clang-6.0 gcc + echo 'gcc-7 hold' + dpkg --set-selections + echo 'g++-7 hold' + dpkg --set-selections + for VERSION in $VERSIONS + rm -f g++-8 gcc-8 cpp-8 gcc + ln -s clang++-6.0 g++-8 + ln -s clang-6.0 gcc-8 + ln -s clang-6.0 cpp-8 + ln -s clang-6.0 gcc + dpkg --set-selections + echo 'gcc-8 hold' dpkg: warning: package not in status nor available database at line 1: gcc-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + dpkg --set-selections + echo 'g++-8 hold' dpkg: warning: package not in status nor available database at line 1: g++-8 dpkg: warning: found unknown packages; this might mean the available database is outdated, and needs to be updated through a frontend method; please see the FAQ + cd - /build/insighttoolkit4-vT1oqG + echo 'Check if gcc, g++ & cpp are actually clang' Check if gcc, g++ & cpp are actually clang + grep clang + gcc --version + cpp --version + grep clang + g++ --version + grep clang I: Finished running '/tmp/clang60'. Finished processing commands. -------------------------------------------------------------------------------- +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://127.0.0.1:9999/debian unstable InRelease Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'insighttoolkit4' packaging is maintained in the 'Git' version control system at: https://anonscm.debian.org/git/debian-med/insighttoolkit.git Please use: git clone https://anonscm.debian.org/git/debian-med/insighttoolkit.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 242 MB of source archives. Get:1 http://127.0.0.1:9999/debian unstable/main insighttoolkit4 4.12.2-dfsg1-1 (dsc) [2632 B] Get:2 http://127.0.0.1:9999/debian unstable/main insighttoolkit4 4.12.2-dfsg1-1 (tar) [235 MB] Get:3 http://127.0.0.1:9999/debian unstable/main insighttoolkit4 4.12.2-dfsg1-1 (tar) [7773 kB] Get:4 http://127.0.0.1:9999/debian unstable/main insighttoolkit4 4.12.2-dfsg1-1 (diff) [23.6 kB] Fetched 242 MB in 9s (27.9 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/insighttoolkit4-vT1oqG/insighttoolkit4-4.12.2-dfsg1' with '<>' I: NOTICE: Log filtering will replace 'build/insighttoolkit4-vT1oqG' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-9I5GKG/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-9I5GKG/apt_archive ./ InRelease Get:2 copy:/<>/resolver-9I5GKG/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-9I5GKG/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-9I5GKG/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-9I5GKG/apt_archive ./ Packages [431 B] Fetched 1737 B in 0s (128 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-9I5GKG/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 10771 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in amd64 i386 all) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 9), cmake (>= 2.8.9), swig3.0, castxml (>= 0.1+git20160202-1.1), zlib1g-dev (>= 1.2.2), libdouble-conversion-dev, libexpat-dev, libpng-dev, libtiff-dev, libfftw3-dev, libdcmtk-dev (>= 3.6.1~20150924-4), libgdcm2-dev (>= 2.6.1-3) | libgdcm2-dev (<< 2.6.0), uuid-dev, libminc-dev, libnifti-dev, libhdf5-dev, python-all-dev Filtered Build-Depends: debhelper (>= 9), cmake (>= 2.8.9), swig3.0, castxml (>= 0.1+git20160202-1.1), zlib1g-dev (>= 1.2.2), libdouble-conversion-dev, libexpat-dev, libpng-dev, libtiff-dev, libfftw3-dev, libdcmtk-dev (>= 3.6.1~20150924-4), libgdcm2-dev (>= 2.6.1-3) | libgdcm2-dev (<< 2.6.0), uuid-dev, libminc-dev, libnifti-dev, libhdf5-dev, python-all-dev dpkg-deb: building package 'sbuild-build-depends-insighttoolkit4-dummy' in '/<>/resolver-9I5GKG/apt_archive/sbuild-build-depends-insighttoolkit4-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-insighttoolkit4-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-9I5GKG/apt_archive ./ InRelease Get:2 copy:/<>/resolver-9I5GKG/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-9I5GKG/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-9I5GKG/apt_archive ./ Sources [649 B] Get:5 copy:/<>/resolver-9I5GKG/apt_archive ./ Packages [734 B] Fetched 2346 B in 0s (64.0 kB/s) Reading package lists... Reading package lists... Install insighttoolkit4 build dependencies (apt-based resolver) --------------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils castxml cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base hdf5-helpers icu-devtools intltool-debian libaec-dev libaec0 libarchive-zip-perl libarchive13 libcharls-dev libcharls1 libcroco3 libcurl3 libcurl3-gnutls libcurl4-gnutls-dev libdcmtk-dev libdcmtk12 libdouble-conversion-dev libdouble-conversion1 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libgdcm2-dev libgdcm2.8 libgfortran4 libglib2.0-0 libgssapi-krb5-2 libhdf5-100 libhdf5-cpp-100 libhdf5-dev libicu-dev libicu57 libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjson-c3 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblzma-dev liblzo2-2 libmagic-mgc libmagic1 libminc-dev libminc2-4.0.0 libncursesw6 libnetcdf-dev libnetcdf13 libnghttp2-14 libnifti-dev libnifti2 libopenjp2-7 libpipeline1 libpng-dev libpng16-16 libprocps6 libpsl5 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libreadline7 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsocket++1 libsqlite3-0 libssh2-1 libssl-dev libssl1.0.2 libssl1.1 libsz2 libtiff-dev libtiff5 libtiff5-dev libtiffxx5 libtimedate-perl libtool libuv1 libwrap0 libwrap0-dev libxml2 libxml2-dev lsb-base m4 man-db mime-support po-debconf procps python python-all python-all-dev python-dev python-minimal python2.7 python2.7-dev python2.7-minimal readline-common swig3.0 uuid-dev zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make dwz gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev pkg-config dcmtk-doc libfftw3-doc krb5-doc krb5-user libhdf5-doc icu-doc liblzma-doc netcdf-bin netcdf-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl python-doc python-tk python2.7-doc binfmt-support readline-doc swig3.0-examples swig3.0-doc Recommended packages: curl | wget | lynx ca-certificates libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libgpm2 pkg-config libpng-tools publicsuffix libsasl2-modules libssl-doc libltdl-dev libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils castxml cmake cmake-data debhelper dh-autoreconf dh-strip-nondeterminism file gettext gettext-base groff-base hdf5-helpers icu-devtools intltool-debian libaec-dev libaec0 libarchive-zip-perl libarchive13 libcharls-dev libcharls1 libcroco3 libcurl3 libcurl3-gnutls libcurl4-gnutls-dev libdcmtk-dev libdcmtk12 libdouble-conversion-dev libdouble-conversion1 libexpat1 libexpat1-dev libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libgdcm2-dev libgdcm2.8 libgfortran4 libglib2.0-0 libgssapi-krb5-2 libhdf5-100 libhdf5-cpp-100 libhdf5-dev libicu-dev libicu57 libjbig-dev libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjson-c3 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common liblzma-dev liblzo2-2 libmagic-mgc libmagic1 libminc-dev libminc2-4.0.0 libncursesw6 libnetcdf-dev libnetcdf13 libnghttp2-14 libnifti-dev libnifti2 libopenjp2-7 libpipeline1 libpng-dev libpng16-16 libprocps6 libpsl5 libpython-all-dev libpython-dev libpython-stdlib libpython2.7 libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libreadline7 librhash0 librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libsocket++1 libsqlite3-0 libssh2-1 libssl-dev libssl1.0.2 libssl1.1 libsz2 libtiff-dev libtiff5 libtiff5-dev libtiffxx5 libtimedate-perl libtool libuv1 libwrap0 libwrap0-dev libxml2 libxml2-dev lsb-base m4 man-db mime-support po-debconf procps python python-all python-all-dev python-dev python-minimal python2.7 python2.7-dev python2.7-minimal readline-common sbuild-build-depends-insighttoolkit4-dummy swig3.0 uuid-dev zlib1g-dev 0 upgraded, 131 newly installed, 0 to remove and 0 not upgraded. Need to get 121 MB of archives. After this operation, 448 MB of additional disk space will be used. Get:1 copy:/<>/resolver-9I5GKG/apt_archive ./ sbuild-build-depends-insighttoolkit4-dummy 0.invalid.0 [1020 B] Get:2 http://127.0.0.1:9999/debian unstable/main amd64 bsdmainutils amd64 11.1.2 [190 kB] Get:3 http://127.0.0.1:9999/debian unstable/main amd64 groff-base amd64 1.22.3-10 [1176 kB] Get:4 http://127.0.0.1:9999/debian unstable/main amd64 libpipeline1 amd64 1.5.0-1 [29.0 kB] Get:5 http://127.0.0.1:9999/debian unstable/main amd64 man-db amd64 2.8.3-2 [1180 kB] Get:6 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-minimal amd64 2.7.15-1 [393 kB] Get:7 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-minimal amd64 2.7.15-1 [1353 kB] Get:8 http://127.0.0.1:9999/debian unstable/main amd64 python-minimal amd64 2.7.15~rc1-1 [41.1 kB] Get:9 http://127.0.0.1:9999/debian unstable/main amd64 mime-support all 3.60 [36.7 kB] Get:10 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1 amd64 2.2.5-3 [96.8 kB] Get:11 http://127.0.0.1:9999/debian unstable/main amd64 libncursesw6 amd64 6.1+20180210-2 [131 kB] Get:12 http://127.0.0.1:9999/debian unstable/main amd64 readline-common all 7.0-3 [70.4 kB] Get:13 http://127.0.0.1:9999/debian unstable/main amd64 libreadline7 amd64 7.0-3+b1 [151 kB] Get:14 http://127.0.0.1:9999/debian unstable/main amd64 libsqlite3-0 amd64 3.23.1-1 [603 kB] Get:15 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.1 amd64 1.1.0h-2 [1352 kB] Get:16 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-stdlib amd64 2.7.15-1 [1912 kB] Get:17 http://127.0.0.1:9999/debian unstable/main amd64 python2.7 amd64 2.7.15-1 [298 kB] Get:18 http://127.0.0.1:9999/debian unstable/main amd64 libpython-stdlib amd64 2.7.15~rc1-1 [20.5 kB] Get:19 http://127.0.0.1:9999/debian unstable/main amd64 python amd64 2.7.15~rc1-1 [155 kB] Get:20 http://127.0.0.1:9999/debian unstable/main amd64 libprocps6 amd64 2:3.3.14-1 [60.4 kB] Get:21 http://127.0.0.1:9999/debian unstable/main amd64 lsb-base all 9.20170808 [28.1 kB] Get:22 http://127.0.0.1:9999/debian unstable/main amd64 procps amd64 2:3.3.14-1 [257 kB] Get:23 http://127.0.0.1:9999/debian unstable/main amd64 libmagic-mgc amd64 1:5.33-2 [234 kB] Get:24 http://127.0.0.1:9999/debian unstable/main amd64 libmagic1 amd64 1:5.33-2 [113 kB] Get:25 http://127.0.0.1:9999/debian unstable/main amd64 file amd64 1:5.33-2 [65.6 kB] Get:26 http://127.0.0.1:9999/debian unstable/main amd64 gettext-base amd64 0.19.8.1-6 [122 kB] Get:27 http://127.0.0.1:9999/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:28 http://127.0.0.1:9999/debian unstable/main amd64 m4 amd64 1.4.18-1 [202 kB] Get:29 http://127.0.0.1:9999/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:30 http://127.0.0.1:9999/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:31 http://127.0.0.1:9999/debian unstable/main amd64 automake all 1:1.15.1-3.1 [736 kB] Get:32 http://127.0.0.1:9999/debian unstable/main amd64 autopoint all 0.19.8.1-6 [434 kB] Get:33 http://127.0.0.1:9999/debian unstable/main amd64 castxml amd64 0.1+git20170823-2 [14.4 MB] Get:34 http://127.0.0.1:9999/debian unstable/main amd64 cmake-data all 3.11.1-1 [1386 kB] Get:35 http://127.0.0.1:9999/debian unstable/main amd64 liblzo2-2 amd64 2.08-1.2+b2 [55.0 kB] Get:36 http://127.0.0.1:9999/debian unstable/main amd64 libicu57 amd64 57.1-9 [7698 kB] Get:37 http://127.0.0.1:9999/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-6.1 [725 kB] Get:38 http://127.0.0.1:9999/debian unstable/main amd64 libarchive13 amd64 3.2.2-3.1 [296 kB] Get:39 http://127.0.0.1:9999/debian unstable/main amd64 libkeyutils1 amd64 1.5.9-9.2 [12.9 kB] Get:40 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5support0 amd64 1.16-2 [62.8 kB] Get:41 http://127.0.0.1:9999/debian unstable/main amd64 libk5crypto3 amd64 1.16-2 [121 kB] Get:42 http://127.0.0.1:9999/debian unstable/main amd64 libkrb5-3 amd64 1.16-2 [316 kB] Get:43 http://127.0.0.1:9999/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.16-2 [158 kB] Get:44 http://127.0.0.1:9999/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27~101-g0780600+dfsg-3.1 [68.6 kB] Get:45 http://127.0.0.1:9999/debian unstable/main amd64 libsasl2-2 amd64 2.1.27~101-g0780600+dfsg-3.1 [105 kB] Get:46 http://127.0.0.1:9999/debian unstable/main amd64 libldap-common all 2.4.45+dfsg-1 [87.0 kB] Get:47 http://127.0.0.1:9999/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.45+dfsg-1 [223 kB] Get:48 http://127.0.0.1:9999/debian unstable/main amd64 libnghttp2-14 amd64 1.31.1-1 [80.7 kB] Get:49 http://127.0.0.1:9999/debian unstable/main amd64 libpsl5 amd64 0.20.1-1 [52.6 kB] Get:50 http://127.0.0.1:9999/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-1+b1 [60.4 kB] Get:51 http://127.0.0.1:9999/debian unstable/main amd64 libssh2-1 amd64 1.8.0-1 [138 kB] Get:52 http://127.0.0.1:9999/debian unstable/main amd64 libssl1.0.2 amd64 1.0.2o-1 [1296 kB] Get:53 http://127.0.0.1:9999/debian unstable/main amd64 libcurl3 amd64 7.58.0-2 [312 kB] Get:54 http://127.0.0.1:9999/debian unstable/main amd64 librhash0 amd64 1.3.6-2 [87.1 kB] Get:55 http://127.0.0.1:9999/debian unstable/main amd64 libuv1 amd64 1.18.0-3 [98.5 kB] Get:56 http://127.0.0.1:9999/debian unstable/main amd64 cmake amd64 3.11.1-1 [3190 kB] Get:57 http://127.0.0.1:9999/debian unstable/main amd64 libtool all 2.4.6-2.1 [547 kB] Get:58 http://127.0.0.1:9999/debian unstable/main amd64 dh-autoreconf all 17 [16.5 kB] Get:59 http://127.0.0.1:9999/debian unstable/main amd64 libarchive-zip-perl all 1.60-1 [95.6 kB] Get:60 http://127.0.0.1:9999/debian unstable/main amd64 libfile-stripnondeterminism-perl all 0.041-1 [19.9 kB] Get:61 http://127.0.0.1:9999/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:62 http://127.0.0.1:9999/debian unstable/main amd64 dh-strip-nondeterminism all 0.041-1 [12.0 kB] Get:63 http://127.0.0.1:9999/debian unstable/main amd64 libglib2.0-0 amd64 2.56.1-2 [2928 kB] Get:64 http://127.0.0.1:9999/debian unstable/main amd64 libcroco3 amd64 0.6.12-2 [144 kB] Get:65 http://127.0.0.1:9999/debian unstable/main amd64 gettext amd64 0.19.8.1-6 [1302 kB] Get:66 http://127.0.0.1:9999/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.4 [26.3 kB] Get:67 http://127.0.0.1:9999/debian unstable/main amd64 po-debconf all 1.0.20 [247 kB] Get:68 http://127.0.0.1:9999/debian unstable/main amd64 debhelper all 11.2.1 [1013 kB] Get:69 http://127.0.0.1:9999/debian unstable/main amd64 hdf5-helpers amd64 1.10.0-patch1+docs-4+b1 [36.3 kB] Get:70 http://127.0.0.1:9999/debian unstable/main amd64 icu-devtools amd64 57.1-9 [177 kB] Get:71 http://127.0.0.1:9999/debian unstable/main amd64 libaec0 amd64 1.0.2-1 [20.1 kB] Get:72 http://127.0.0.1:9999/debian unstable/main amd64 libsz2 amd64 1.0.2-1 [6676 B] Get:73 http://127.0.0.1:9999/debian unstable/main amd64 libaec-dev amd64 1.0.2-1 [18.4 kB] Get:74 http://127.0.0.1:9999/debian unstable/main amd64 libcharls1 amd64 1.1.0+dfsg-2 [56.0 kB] Get:75 http://127.0.0.1:9999/debian unstable/main amd64 libcharls-dev amd64 1.1.0+dfsg-2 [21.6 kB] Get:76 http://127.0.0.1:9999/debian unstable/main amd64 libcurl3-gnutls amd64 7.58.0-2 [310 kB] Get:77 http://127.0.0.1:9999/debian unstable/main amd64 libcurl4-gnutls-dev amd64 7.58.0-2 [394 kB] Get:78 http://127.0.0.1:9999/debian unstable/main amd64 libicu-dev amd64 57.1-9 [16.6 MB] Get:79 http://127.0.0.1:9999/debian unstable/main amd64 libxml2-dev amd64 2.9.4+dfsg1-6.1 [821 kB] Get:80 http://127.0.0.1:9999/debian unstable/main amd64 libssl-dev amd64 1.1.0h-2 [1589 kB] Get:81 http://127.0.0.1:9999/debian unstable/main amd64 libpng16-16 amd64 1.6.34-1 [287 kB] Get:82 http://127.0.0.1:9999/debian unstable/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-1 [214 kB] Get:83 http://127.0.0.1:9999/debian unstable/main amd64 libpng-dev amd64 1.6.34-1 [294 kB] Get:84 http://127.0.0.1:9999/debian unstable/main amd64 libwrap0 amd64 7.6.q-27 [58.6 kB] Get:85 http://127.0.0.1:9999/debian unstable/main amd64 libwrap0-dev amd64 7.6.q-27 [21.5 kB] Get:86 http://127.0.0.1:9999/debian unstable/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:87 http://127.0.0.1:9999/debian unstable/main amd64 libjbig-dev amd64 2.1-3.1+b2 [30.5 kB] Get:88 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+b1 [134 kB] Get:89 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:1.5.2-2+b1 [208 kB] Get:90 http://127.0.0.1:9999/debian unstable/main amd64 libjpeg-dev all 1:1.5.2-2 [57.5 kB] Get:91 http://127.0.0.1:9999/debian unstable/main amd64 liblzma-dev amd64 5.2.2-1.3 [292 kB] Get:92 http://127.0.0.1:9999/debian unstable/main amd64 libtiff5 amd64 4.0.9-5 [246 kB] Get:93 http://127.0.0.1:9999/debian unstable/main amd64 libtiffxx5 amd64 4.0.9-5 [100 kB] Get:94 http://127.0.0.1:9999/debian unstable/main amd64 libtiff5-dev amd64 4.0.9-5 [367 kB] Get:95 http://127.0.0.1:9999/debian unstable/main amd64 libtiff-dev amd64 4.0.9-5 [96.3 kB] Get:96 http://127.0.0.1:9999/debian unstable/main amd64 libdcmtk12 amd64 3.6.2-3 [4559 kB] Get:97 http://127.0.0.1:9999/debian unstable/main amd64 libdcmtk-dev amd64 3.6.2-3 [917 kB] Get:98 http://127.0.0.1:9999/debian unstable/main amd64 libdouble-conversion1 amd64 2.0.1-5 [33.7 kB] Get:99 http://127.0.0.1:9999/debian unstable/main amd64 libdouble-conversion-dev amd64 2.0.1-5 [50.0 kB] Get:100 http://127.0.0.1:9999/debian unstable/main amd64 libexpat1-dev amd64 2.2.5-3 [140 kB] Get:101 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-double3 amd64 3.3.7-1+b1 [740 kB] Get:102 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-long3 amd64 3.3.7-1+b1 [315 kB] Get:103 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.7-1+b1 [559 kB] Get:104 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-single3 amd64 3.3.7-1+b1 [770 kB] Get:105 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-bin amd64 3.3.7-1+b1 [51.0 kB] Get:106 http://127.0.0.1:9999/debian unstable/main amd64 libfftw3-dev amd64 3.3.7-1+b1 [2128 kB] Get:107 http://127.0.0.1:9999/debian unstable/main amd64 libjson-c3 amd64 0.12.1-1.3 [26.1 kB] Get:108 http://127.0.0.1:9999/debian unstable/main amd64 libopenjp2-7 amd64 2.3.0-1 [163 kB] Get:109 http://127.0.0.1:9999/debian unstable/main amd64 libsocket++1 amd64 1.12.13-9 [40.6 kB] Get:110 http://127.0.0.1:9999/debian unstable/main amd64 libgdcm2.8 amd64 2.8.6-1 [1856 kB] Get:111 http://127.0.0.1:9999/debian unstable/main amd64 libgdcm2-dev amd64 2.8.6-1 [260 kB] Get:112 http://127.0.0.1:9999/debian unstable/main amd64 libgfortran4 amd64 7.3.0-17 [487 kB] Get:113 http://127.0.0.1:9999/debian unstable/main amd64 libhdf5-100 amd64 1.10.0-patch1+docs-4+b1 [1284 kB] Get:114 http://127.0.0.1:9999/debian unstable/main amd64 libhdf5-cpp-100 amd64 1.10.0-patch1+docs-4+b1 [129 kB] Get:115 http://127.0.0.1:9999/debian unstable/main amd64 libhdf5-dev amd64 1.10.0-patch1+docs-4+b1 [2529 kB] Get:116 http://127.0.0.1:9999/debian unstable/main amd64 libnetcdf13 amd64 1:4.6.1-1 [394 kB] Get:117 http://127.0.0.1:9999/debian unstable/main amd64 libnifti2 amd64 2.0.0-2+b2 [106 kB] Get:118 http://127.0.0.1:9999/debian unstable/main amd64 libminc2-4.0.0 amd64 2.3.00-5 [230 kB] Get:119 http://127.0.0.1:9999/debian unstable/main amd64 libnetcdf-dev amd64 1:4.6.1-1 [80.5 kB] Get:120 http://127.0.0.1:9999/debian unstable/main amd64 libminc-dev amd64 2.3.00-5 [71.4 kB] Get:121 http://127.0.0.1:9999/debian unstable/main amd64 libnifti-dev amd64 2.0.0-2+b2 [136 kB] Get:122 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7 amd64 2.7.15-1 [1052 kB] Get:123 http://127.0.0.1:9999/debian unstable/main amd64 libpython2.7-dev amd64 2.7.15-1 [28.3 MB] Get:124 http://127.0.0.1:9999/debian unstable/main amd64 libpython-dev amd64 2.7.15~rc1-1 [20.6 kB] Get:125 http://127.0.0.1:9999/debian unstable/main amd64 libpython-all-dev amd64 2.7.15~rc1-1 [1048 B] Get:126 http://127.0.0.1:9999/debian unstable/main amd64 python-all amd64 2.7.15~rc1-1 [1028 B] Get:127 http://127.0.0.1:9999/debian unstable/main amd64 python2.7-dev amd64 2.7.15-1 [290 kB] Get:128 http://127.0.0.1:9999/debian unstable/main amd64 python-dev amd64 2.7.15~rc1-1 [1212 B] Get:129 http://127.0.0.1:9999/debian unstable/main amd64 python-all-dev amd64 2.7.15~rc1-1 [1052 B] Get:130 http://127.0.0.1:9999/debian unstable/main amd64 swig3.0 amd64 3.0.12-1 [1395 kB] Get:131 http://127.0.0.1:9999/debian unstable/main amd64 uuid-dev amd64 2.31.1-0.5 [91.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 121 MB in 5s (26.3 MB/s) Selecting previously unselected package bsdmainutils. (Reading database ... 10771 files and directories currently installed.) Preparing to unpack .../00-bsdmainutils_11.1.2_amd64.deb ... Unpacking bsdmainutils (11.1.2) ... Selecting previously unselected package groff-base. Preparing to unpack .../01-groff-base_1.22.3-10_amd64.deb ... Unpacking groff-base (1.22.3-10) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../02-libpipeline1_1.5.0-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.0-1) ... Selecting previously unselected package man-db. Preparing to unpack .../03-man-db_2.8.3-2_amd64.deb ... Unpacking man-db (2.8.3-2) ... Selecting previously unselected package libpython2.7-minimal:amd64. Preparing to unpack .../04-libpython2.7-minimal_2.7.15-1_amd64.deb ... Unpacking libpython2.7-minimal:amd64 (2.7.15-1) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../05-python2.7-minimal_2.7.15-1_amd64.deb ... Unpacking python2.7-minimal (2.7.15-1) ... Selecting previously unselected package python-minimal. Preparing to unpack .../06-python-minimal_2.7.15~rc1-1_amd64.deb ... Unpacking python-minimal (2.7.15~rc1-1) ... Selecting previously unselected package mime-support. Preparing to unpack .../07-mime-support_3.60_all.deb ... Unpacking mime-support (3.60) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../08-libexpat1_2.2.5-3_amd64.deb ... Unpacking libexpat1:amd64 (2.2.5-3) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../09-libncursesw6_6.1+20180210-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.1+20180210-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../10-readline-common_7.0-3_all.deb ... Unpacking readline-common (7.0-3) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../11-libreadline7_7.0-3+b1_amd64.deb ... Unpacking libreadline7:amd64 (7.0-3+b1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../12-libsqlite3-0_3.23.1-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.23.1-1) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../13-libssl1.1_1.1.0h-2_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.0h-2) ... Selecting previously unselected package libpython2.7-stdlib:amd64. Preparing to unpack .../14-libpython2.7-stdlib_2.7.15-1_amd64.deb ... Unpacking libpython2.7-stdlib:amd64 (2.7.15-1) ... Selecting previously unselected package python2.7. Preparing to unpack .../15-python2.7_2.7.15-1_amd64.deb ... Unpacking python2.7 (2.7.15-1) ... Selecting previously unselected package libpython-stdlib:amd64. Preparing to unpack .../16-libpython-stdlib_2.7.15~rc1-1_amd64.deb ... Unpacking libpython-stdlib:amd64 (2.7.15~rc1-1) ... Setting up libpython2.7-minimal:amd64 (2.7.15-1) ... Setting up python2.7-minimal (2.7.15-1) ... Setting up python-minimal (2.7.15~rc1-1) ... Selecting previously unselected package python. (Reading database ... 12213 files and directories currently installed.) Preparing to unpack .../000-python_2.7.15~rc1-1_amd64.deb ... Unpacking python (2.7.15~rc1-1) ... Selecting previously unselected package libprocps6:amd64. Preparing to unpack .../001-libprocps6_2%3a3.3.14-1_amd64.deb ... Unpacking libprocps6:amd64 (2:3.3.14-1) ... Selecting previously unselected package lsb-base. Preparing to unpack .../002-lsb-base_9.20170808_all.deb ... Unpacking lsb-base (9.20170808) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a3.3.14-1_amd64.deb ... Unpacking procps (2:3.3.14-1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.33-2_amd64.deb ... Unpacking libmagic-mgc (1:5.33-2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../005-libmagic1_1%3a5.33-2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.33-2) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.33-2_amd64.deb ... Unpacking file (1:5.33-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.19.8.1-6_amd64.deb ... Unpacking gettext-base (0.19.8.1-6) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../008-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../009-m4_1.4.18-1_amd64.deb ... Unpacking m4 (1.4.18-1) ... Selecting previously unselected package autoconf. Preparing to unpack .../010-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../011-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../012-automake_1%3a1.15.1-3.1_all.deb ... Unpacking automake (1:1.15.1-3.1) ... Selecting previously unselected package autopoint. Preparing to unpack .../013-autopoint_0.19.8.1-6_all.deb ... Unpacking autopoint (0.19.8.1-6) ... Selecting previously unselected package castxml. Preparing to unpack .../014-castxml_0.1+git20170823-2_amd64.deb ... Unpacking castxml (0.1+git20170823-2) ... Selecting previously unselected package cmake-data. Preparing to unpack .../015-cmake-data_3.11.1-1_all.deb ... Unpacking cmake-data (3.11.1-1) ... Selecting previously unselected package liblzo2-2:amd64. Preparing to unpack .../016-liblzo2-2_2.08-1.2+b2_amd64.deb ... Unpacking liblzo2-2:amd64 (2.08-1.2+b2) ... Selecting previously unselected package libicu57:amd64. Preparing to unpack .../017-libicu57_57.1-9_amd64.deb ... Unpacking libicu57:amd64 (57.1-9) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../018-libxml2_2.9.4+dfsg1-6.1_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-6.1) ... Selecting previously unselected package libarchive13:amd64. Preparing to unpack .../019-libarchive13_3.2.2-3.1_amd64.deb ... Unpacking libarchive13:amd64 (3.2.2-3.1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../020-libkeyutils1_1.5.9-9.2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.5.9-9.2) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../021-libkrb5support0_1.16-2_amd64.deb ... Unpacking libkrb5support0:amd64 (1.16-2) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../022-libk5crypto3_1.16-2_amd64.deb ... Unpacking libk5crypto3:amd64 (1.16-2) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../023-libkrb5-3_1.16-2_amd64.deb ... Unpacking libkrb5-3:amd64 (1.16-2) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../024-libgssapi-krb5-2_1.16-2_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.16-2) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../025-libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3.1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27~101-g0780600+dfsg-3.1) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../026-libsasl2-2_2.1.27~101-g0780600+dfsg-3.1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27~101-g0780600+dfsg-3.1) ... Selecting previously unselected package libldap-common. Preparing to unpack .../027-libldap-common_2.4.45+dfsg-1_all.deb ... Unpacking libldap-common (2.4.45+dfsg-1) ... Selecting previously unselected package libldap-2.4-2:amd64. Preparing to unpack .../028-libldap-2.4-2_2.4.45+dfsg-1_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.45+dfsg-1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../029-libnghttp2-14_1.31.1-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.31.1-1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../030-libpsl5_0.20.1-1_amd64.deb ... Unpacking libpsl5:amd64 (0.20.1-1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../031-librtmp1_2.4+20151223.gitfa8646d.1-1+b1_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-1+b1) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../032-libssh2-1_1.8.0-1_amd64.deb ... Unpacking libssh2-1:amd64 (1.8.0-1) ... Selecting previously unselected package libssl1.0.2:amd64. Preparing to unpack .../033-libssl1.0.2_1.0.2o-1_amd64.deb ... Unpacking libssl1.0.2:amd64 (1.0.2o-1) ... Selecting previously unselected package libcurl3:amd64. Preparing to unpack .../034-libcurl3_7.58.0-2_amd64.deb ... Unpacking libcurl3:amd64 (7.58.0-2) ... Selecting previously unselected package librhash0:amd64. Preparing to unpack .../035-librhash0_1.3.6-2_amd64.deb ... Unpacking librhash0:amd64 (1.3.6-2) ... Selecting previously unselected package libuv1:amd64. Preparing to unpack .../036-libuv1_1.18.0-3_amd64.deb ... Unpacking libuv1:amd64 (1.18.0-3) ... Selecting previously unselected package cmake. Preparing to unpack .../037-cmake_3.11.1-1_amd64.deb ... Unpacking cmake (3.11.1-1) ... Selecting previously unselected package libtool. Preparing to unpack .../038-libtool_2.4.6-2.1_all.deb ... Unpacking libtool (2.4.6-2.1) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../039-dh-autoreconf_17_all.deb ... Unpacking dh-autoreconf (17) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../040-libarchive-zip-perl_1.60-1_all.deb ... Unpacking libarchive-zip-perl (1.60-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../041-libfile-stripnondeterminism-perl_0.041-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (0.041-1) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../042-libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../043-dh-strip-nondeterminism_0.041-1_all.deb ... Unpacking dh-strip-nondeterminism (0.041-1) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../044-libglib2.0-0_2.56.1-2_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.56.1-2) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../045-libcroco3_0.6.12-2_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-2) ... Selecting previously unselected package gettext. Preparing to unpack .../046-gettext_0.19.8.1-6_amd64.deb ... Unpacking gettext (0.19.8.1-6) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../047-intltool-debian_0.35.0+20060710.4_all.deb ... Unpacking intltool-debian (0.35.0+20060710.4) ... Selecting previously unselected package po-debconf. Preparing to unpack .../048-po-debconf_1.0.20_all.deb ... Unpacking po-debconf (1.0.20) ... Selecting previously unselected package debhelper. Preparing to unpack .../049-debhelper_11.2.1_all.deb ... Unpacking debhelper (11.2.1) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../050-hdf5-helpers_1.10.0-patch1+docs-4+b1_amd64.deb ... Unpacking hdf5-helpers (1.10.0-patch1+docs-4+b1) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../051-icu-devtools_57.1-9_amd64.deb ... Unpacking icu-devtools (57.1-9) ... Selecting previously unselected package libaec0:amd64. Preparing to unpack .../052-libaec0_1.0.2-1_amd64.deb ... Unpacking libaec0:amd64 (1.0.2-1) ... Selecting previously unselected package libsz2:amd64. Preparing to unpack .../053-libsz2_1.0.2-1_amd64.deb ... Unpacking libsz2:amd64 (1.0.2-1) ... Selecting previously unselected package libaec-dev:amd64. Preparing to unpack .../054-libaec-dev_1.0.2-1_amd64.deb ... Unpacking libaec-dev:amd64 (1.0.2-1) ... Selecting previously unselected package libcharls1:amd64. Preparing to unpack .../055-libcharls1_1.1.0+dfsg-2_amd64.deb ... Unpacking libcharls1:amd64 (1.1.0+dfsg-2) ... Selecting previously unselected package libcharls-dev:amd64. Preparing to unpack .../056-libcharls-dev_1.1.0+dfsg-2_amd64.deb ... Unpacking libcharls-dev:amd64 (1.1.0+dfsg-2) ... Selecting previously unselected package libcurl3-gnutls:amd64. Preparing to unpack .../057-libcurl3-gnutls_7.58.0-2_amd64.deb ... Unpacking libcurl3-gnutls:amd64 (7.58.0-2) ... Selecting previously unselected package libcurl4-gnutls-dev:amd64. Preparing to unpack .../058-libcurl4-gnutls-dev_7.58.0-2_amd64.deb ... Unpacking libcurl4-gnutls-dev:amd64 (7.58.0-2) ... Selecting previously unselected package libicu-dev. Preparing to unpack .../059-libicu-dev_57.1-9_amd64.deb ... Unpacking libicu-dev (57.1-9) ... Selecting previously unselected package libxml2-dev:amd64. Preparing to unpack .../060-libxml2-dev_2.9.4+dfsg1-6.1_amd64.deb ... Unpacking libxml2-dev:amd64 (2.9.4+dfsg1-6.1) ... Selecting previously unselected package libssl-dev:amd64. Preparing to unpack .../061-libssl-dev_1.1.0h-2_amd64.deb ... Unpacking libssl-dev:amd64 (1.1.0h-2) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../062-libpng16-16_1.6.34-1_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.34-1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../063-zlib1g-dev_1%3a1.2.11.dfsg-1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.2.11.dfsg-1) ... Selecting previously unselected package libpng-dev:amd64. Preparing to unpack .../064-libpng-dev_1.6.34-1_amd64.deb ... Unpacking libpng-dev:amd64 (1.6.34-1) ... Selecting previously unselected package libwrap0:amd64. Preparing to unpack .../065-libwrap0_7.6.q-27_amd64.deb ... Unpacking libwrap0:amd64 (7.6.q-27) ... Selecting previously unselected package libwrap0-dev:amd64. Preparing to unpack .../066-libwrap0-dev_7.6.q-27_amd64.deb ... Unpacking libwrap0-dev:amd64 (7.6.q-27) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../067-libjbig0_2.1-3.1+b2_amd64.deb ... Unpacking libjbig0:amd64 (2.1-3.1+b2) ... Selecting previously unselected package libjbig-dev:amd64. Preparing to unpack .../068-libjbig-dev_2.1-3.1+b2_amd64.deb ... Unpacking libjbig-dev:amd64 (2.1-3.1+b2) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../069-libjpeg62-turbo_1%3a1.5.2-2+b1_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:1.5.2-2+b1) ... Selecting previously unselected package libjpeg62-turbo-dev:amd64. Preparing to unpack .../070-libjpeg62-turbo-dev_1%3a1.5.2-2+b1_amd64.deb ... Unpacking libjpeg62-turbo-dev:amd64 (1:1.5.2-2+b1) ... Selecting previously unselected package libjpeg-dev. Preparing to unpack .../071-libjpeg-dev_1%3a1.5.2-2_all.deb ... Unpacking libjpeg-dev (1:1.5.2-2) ... Selecting previously unselected package liblzma-dev:amd64. Preparing to unpack .../072-liblzma-dev_5.2.2-1.3_amd64.deb ... Unpacking liblzma-dev:amd64 (5.2.2-1.3) ... Selecting previously unselected package libtiff5:amd64. Preparing to unpack .../073-libtiff5_4.0.9-5_amd64.deb ... Unpacking libtiff5:amd64 (4.0.9-5) ... Selecting previously unselected package libtiffxx5:amd64. Preparing to unpack .../074-libtiffxx5_4.0.9-5_amd64.deb ... Unpacking libtiffxx5:amd64 (4.0.9-5) ... Selecting previously unselected package libtiff5-dev:amd64. Preparing to unpack .../075-libtiff5-dev_4.0.9-5_amd64.deb ... Unpacking libtiff5-dev:amd64 (4.0.9-5) ... Selecting previously unselected package libtiff-dev. Preparing to unpack .../076-libtiff-dev_4.0.9-5_amd64.deb ... Unpacking libtiff-dev (4.0.9-5) ... Selecting previously unselected package libdcmtk12. Preparing to unpack .../077-libdcmtk12_3.6.2-3_amd64.deb ... Unpacking libdcmtk12 (3.6.2-3) ... Selecting previously unselected package libdcmtk-dev. Preparing to unpack .../078-libdcmtk-dev_3.6.2-3_amd64.deb ... Unpacking libdcmtk-dev (3.6.2-3) ... Selecting previously unselected package libdouble-conversion1:amd64. Preparing to unpack .../079-libdouble-conversion1_2.0.1-5_amd64.deb ... Unpacking libdouble-conversion1:amd64 (2.0.1-5) ... Selecting previously unselected package libdouble-conversion-dev:amd64. Preparing to unpack .../080-libdouble-conversion-dev_2.0.1-5_amd64.deb ... Unpacking libdouble-conversion-dev:amd64 (2.0.1-5) ... Selecting previously unselected package libexpat1-dev:amd64. Preparing to unpack .../081-libexpat1-dev_2.2.5-3_amd64.deb ... Unpacking libexpat1-dev:amd64 (2.2.5-3) ... Selecting previously unselected package libfftw3-double3:amd64. Preparing to unpack .../082-libfftw3-double3_3.3.7-1+b1_amd64.deb ... Unpacking libfftw3-double3:amd64 (3.3.7-1+b1) ... Selecting previously unselected package libfftw3-long3:amd64. Preparing to unpack .../083-libfftw3-long3_3.3.7-1+b1_amd64.deb ... Unpacking libfftw3-long3:amd64 (3.3.7-1+b1) ... Selecting previously unselected package libfftw3-quad3:amd64. Preparing to unpack .../084-libfftw3-quad3_3.3.7-1+b1_amd64.deb ... Unpacking libfftw3-quad3:amd64 (3.3.7-1+b1) ... Selecting previously unselected package libfftw3-single3:amd64. Preparing to unpack .../085-libfftw3-single3_3.3.7-1+b1_amd64.deb ... Unpacking libfftw3-single3:amd64 (3.3.7-1+b1) ... Selecting previously unselected package libfftw3-bin. Preparing to unpack .../086-libfftw3-bin_3.3.7-1+b1_amd64.deb ... Unpacking libfftw3-bin (3.3.7-1+b1) ... Selecting previously unselected package libfftw3-dev:amd64. Preparing to unpack .../087-libfftw3-dev_3.3.7-1+b1_amd64.deb ... Unpacking libfftw3-dev:amd64 (3.3.7-1+b1) ... Selecting previously unselected package libjson-c3:amd64. Preparing to unpack .../088-libjson-c3_0.12.1-1.3_amd64.deb ... Unpacking libjson-c3:amd64 (0.12.1-1.3) ... Selecting previously unselected package libopenjp2-7:amd64. Preparing to unpack .../089-libopenjp2-7_2.3.0-1_amd64.deb ... Unpacking libopenjp2-7:amd64 (2.3.0-1) ... Selecting previously unselected package libsocket++1:amd64. Preparing to unpack .../090-libsocket++1_1.12.13-9_amd64.deb ... Unpacking libsocket++1:amd64 (1.12.13-9) ... Selecting previously unselected package libgdcm2.8:amd64. Preparing to unpack .../091-libgdcm2.8_2.8.6-1_amd64.deb ... Unpacking libgdcm2.8:amd64 (2.8.6-1) ... Selecting previously unselected package libgdcm2-dev. Preparing to unpack .../092-libgdcm2-dev_2.8.6-1_amd64.deb ... Unpacking libgdcm2-dev (2.8.6-1) ... Selecting previously unselected package libgfortran4:amd64. Preparing to unpack .../093-libgfortran4_7.3.0-17_amd64.deb ... Unpacking libgfortran4:amd64 (7.3.0-17) ... Selecting previously unselected package libhdf5-100:amd64. Preparing to unpack .../094-libhdf5-100_1.10.0-patch1+docs-4+b1_amd64.deb ... Unpacking libhdf5-100:amd64 (1.10.0-patch1+docs-4+b1) ... Selecting previously unselected package libhdf5-cpp-100:amd64. Preparing to unpack .../095-libhdf5-cpp-100_1.10.0-patch1+docs-4+b1_amd64.deb ... Unpacking libhdf5-cpp-100:amd64 (1.10.0-patch1+docs-4+b1) ... Selecting previously unselected package libhdf5-dev. Preparing to unpack .../096-libhdf5-dev_1.10.0-patch1+docs-4+b1_amd64.deb ... Unpacking libhdf5-dev (1.10.0-patch1+docs-4+b1) ... Selecting previously unselected package libnetcdf13:amd64. Preparing to unpack .../097-libnetcdf13_1%3a4.6.1-1_amd64.deb ... Unpacking libnetcdf13:amd64 (1:4.6.1-1) ... Selecting previously unselected package libnifti2. Preparing to unpack .../098-libnifti2_2.0.0-2+b2_amd64.deb ... Unpacking libnifti2 (2.0.0-2+b2) ... Selecting previously unselected package libminc2-4.0.0:amd64. Preparing to unpack .../099-libminc2-4.0.0_2.3.00-5_amd64.deb ... Unpacking libminc2-4.0.0:amd64 (2.3.00-5) ... Selecting previously unselected package libnetcdf-dev. Preparing to unpack .../100-libnetcdf-dev_1%3a4.6.1-1_amd64.deb ... Unpacking libnetcdf-dev (1:4.6.1-1) ... Selecting previously unselected package libminc-dev. Preparing to unpack .../101-libminc-dev_2.3.00-5_amd64.deb ... Unpacking libminc-dev (2.3.00-5) ... Selecting previously unselected package libnifti-dev. Preparing to unpack .../102-libnifti-dev_2.0.0-2+b2_amd64.deb ... Unpacking libnifti-dev (2.0.0-2+b2) ... Selecting previously unselected package libpython2.7:amd64. Preparing to unpack .../103-libpython2.7_2.7.15-1_amd64.deb ... Unpacking libpython2.7:amd64 (2.7.15-1) ... Selecting previously unselected package libpython2.7-dev:amd64. Preparing to unpack .../104-libpython2.7-dev_2.7.15-1_amd64.deb ... Unpacking libpython2.7-dev:amd64 (2.7.15-1) ... Selecting previously unselected package libpython-dev:amd64. Preparing to unpack .../105-libpython-dev_2.7.15~rc1-1_amd64.deb ... Unpacking libpython-dev:amd64 (2.7.15~rc1-1) ... Selecting previously unselected package libpython-all-dev:amd64. Preparing to unpack .../106-libpython-all-dev_2.7.15~rc1-1_amd64.deb ... Unpacking libpython-all-dev:amd64 (2.7.15~rc1-1) ... Selecting previously unselected package python-all. Preparing to unpack .../107-python-all_2.7.15~rc1-1_amd64.deb ... Unpacking python-all (2.7.15~rc1-1) ... Selecting previously unselected package python2.7-dev. Preparing to unpack .../108-python2.7-dev_2.7.15-1_amd64.deb ... Unpacking python2.7-dev (2.7.15-1) ... Selecting previously unselected package python-dev. Preparing to unpack .../109-python-dev_2.7.15~rc1-1_amd64.deb ... Unpacking python-dev (2.7.15~rc1-1) ... Selecting previously unselected package python-all-dev. Preparing to unpack .../110-python-all-dev_2.7.15~rc1-1_amd64.deb ... Unpacking python-all-dev (2.7.15~rc1-1) ... Selecting previously unselected package swig3.0. Preparing to unpack .../111-swig3.0_3.0.12-1_amd64.deb ... Unpacking swig3.0 (3.0.12-1) ... Selecting previously unselected package uuid-dev:amd64. Preparing to unpack .../112-uuid-dev_2.31.1-0.5_amd64.deb ... Unpacking uuid-dev:amd64 (2.31.1-0.5) ... Selecting previously unselected package sbuild-build-depends-insighttoolkit4-dummy. Preparing to unpack .../113-sbuild-build-depends-insighttoolkit4-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-insighttoolkit4-dummy (0.invalid.0) ... Setting up readline-common (7.0-3) ... Setting up libaec0:amd64 (1.0.2-1) ... Setting up libexpat1:amd64 (2.2.5-3) ... Setting up libopenjp2-7:amd64 (2.3.0-1) ... Setting up libnifti2 (2.0.0-2+b2) ... Setting up libjpeg62-turbo:amd64 (1:1.5.2-2+b1) ... Setting up libarchive-zip-perl (1.60-1) ... Setting up libnghttp2-14:amd64 (1.31.1-1) ... Setting up libdouble-conversion1:amd64 (2.0.1-5) ... Setting up swig3.0 (3.0.12-1) ... Setting up mime-support (3.60) ... Setting up libgfortran4:amd64 (7.3.0-17) ... Setting up libpng16-16:amd64 (1.6.34-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libldap-common (2.4.45+dfsg-1) ... Setting up libuv1:amd64 (1.18.0-3) ... Setting up libreadline7:amd64 (7.0-3+b1) ... Setting up libjson-c3:amd64 (0.12.1-1.3) ... Setting up libpsl5:amd64 (0.20.1-1) ... Setting up libcharls1:amd64 (1.1.0+dfsg-2) ... Setting up groff-base (1.22.3-10) ... Setting up libglib2.0-0:amd64 (2.56.1-2) ... No schema files found: doing nothing. Setting up libncursesw6:amd64 (6.1+20180210-2) ... Setting up libsasl2-modules-db:amd64 (2.1.27~101-g0780600+dfsg-3.1) ... Setting up libsasl2-2:amd64 (2.1.27~101-g0780600+dfsg-3.1) ... Setting up uuid-dev:amd64 (2.31.1-0.5) ... Setting up libsocket++1:amd64 (1.12.13-9) ... Setting up libtiff5:amd64 (4.0.9-5) ... Setting up gettext-base (0.19.8.1-6) ... Setting up cmake-data (3.11.1-1) ... Setting up libpipeline1:amd64 (1.5.0-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-1+b1) ... Setting up m4 (1.4.18-1) ... Setting up libfftw3-double3:amd64 (3.3.7-1+b1) ... Setting up libicu57:amd64 (57.1-9) ... Setting up libprocps6:amd64 (2:3.3.14-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-6.1) ... Setting up libmagic-mgc (1:5.33-2) ... Setting up libmagic1:amd64 (1:5.33-2) ... Setting up lsb-base (9.20170808) ... Setting up librhash0:amd64 (1.3.6-2) ... Setting up libjbig-dev:amd64 (2.1-3.1+b2) ... Setting up procps (2:3.3.14-1) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libcroco3:amd64 (0.6.12-2) ... Setting up libnifti-dev (2.0.0-2+b2) ... Setting up libfftw3-quad3:amd64 (3.3.7-1+b1) ... Setting up libssl1.0.2:amd64 (1.0.2o-1) ... Setting up libssh2-1:amd64 (1.8.0-1) ... Processing triggers for libc-bin (2.27-3) ... Setting up autotools-dev (20180224.1) ... Setting up libldap-2.4-2:amd64 (2.4.45+dfsg-1) ... Setting up libssl1.1:amd64 (1.1.0h-2) ... Setting up libgdcm2.8:amd64 (2.8.6-1) ... Setting up libcharls-dev:amd64 (1.1.0+dfsg-2) ... Setting up libsqlite3-0:amd64 (3.23.1-1) ... Setting up libtiffxx5:amd64 (4.0.9-5) ... Setting up libexpat1-dev:amd64 (2.2.5-3) ... Setting up libfftw3-single3:amd64 (3.3.7-1+b1) ... Setting up icu-devtools (57.1-9) ... Setting up libjpeg62-turbo-dev:amd64 (1:1.5.2-2+b1) ... Setting up liblzma-dev:amd64 (5.2.2-1.3) ... Setting up libkeyutils1:amd64 (1.5.9-9.2) ... Setting up bsdmainutils (11.1.2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libfftw3-long3:amd64 (3.3.7-1+b1) ... Setting up castxml (0.1+git20170823-2) ... Setting up hdf5-helpers (1.10.0-patch1+docs-4+b1) ... Setting up libpython2.7-stdlib:amd64 (2.7.15-1) ... Setting up autopoint (0.19.8.1-6) ... Setting up liblzo2-2:amd64 (2.08-1.2+b2) ... Setting up libwrap0:amd64 (7.6.q-27) ... Setting up libsz2:amd64 (1.0.2-1) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-1) ... Setting up libfile-stripnondeterminism-perl (0.041-1) ... Setting up libfftw3-bin (3.3.7-1+b1) ... Setting up libdouble-conversion-dev:amd64 (2.0.1-5) ... Setting up libhdf5-100:amd64 (1.10.0-patch1+docs-4+b1) ... Setting up libwrap0-dev:amd64 (7.6.q-27) ... Setting up gettext (0.19.8.1-6) ... Setting up libarchive13:amd64 (3.2.2-3.1) ... Setting up libssl-dev:amd64 (1.1.0h-2) ... Setting up libtiff5-dev:amd64 (4.0.9-5) ... Setting up libaec-dev:amd64 (1.0.2-1) ... Setting up python2.7 (2.7.15-1) ... Setting up autoconf (2.69-11) ... Setting up libicu-dev (57.1-9) ... Setting up libgdcm2-dev (2.8.6-1) ... Setting up file (1:5.33-2) ... Setting up libkrb5support0:amd64 (1.16-2) ... Setting up libxml2-dev:amd64 (2.9.4+dfsg1-6.1) ... Setting up libpython-stdlib:amd64 (2.7.15~rc1-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up libjpeg-dev (1:1.5.2-2) ... Setting up libpython2.7:amd64 (2.7.15-1) ... Setting up libfftw3-dev:amd64 (3.3.7-1+b1) ... Setting up automake (1:1.15.1-3.1) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up libdcmtk12 (3.6.2-3) ... Setting up man-db (2.8.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython2.7-dev:amd64 (2.7.15-1) ... Setting up libpng-dev:amd64 (1.6.34-1) ... Setting up python2.7-dev (2.7.15-1) ... Setting up python (2.7.15~rc1-1) ... Setting up libtool (2.4.6-2.1) ... Setting up libpython-dev:amd64 (2.7.15~rc1-1) ... Setting up libtiff-dev (4.0.9-5) ... Setting up libk5crypto3:amd64 (1.16-2) ... Setting up libhdf5-cpp-100:amd64 (1.10.0-patch1+docs-4+b1) ... Setting up po-debconf (1.0.20) ... Setting up python-dev (2.7.15~rc1-1) ... Setting up libpython-all-dev:amd64 (2.7.15~rc1-1) ... Setting up libhdf5-dev (1.10.0-patch1+docs-4+b1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libkrb5-3:amd64 (1.16-2) ... Setting up libdcmtk-dev (3.6.2-3) ... Setting up python-all (2.7.15~rc1-1) ... Setting up libgssapi-krb5-2:amd64 (1.16-2) ... Setting up python-all-dev (2.7.15~rc1-1) ... Setting up libcurl3:amd64 (7.58.0-2) ... Setting up libcurl3-gnutls:amd64 (7.58.0-2) ... Setting up libnetcdf13:amd64 (1:4.6.1-1) ... Setting up cmake (3.11.1-1) ... Setting up libcurl4-gnutls-dev:amd64 (7.58.0-2) ... Setting up libnetcdf-dev (1:4.6.1-1) ... Setting up libminc2-4.0.0:amd64 (2.3.00-5) ... Setting up libminc-dev (2.3.00-5) ... Setting up dh-autoreconf (17) ... Setting up dh-strip-nondeterminism (0.041-1) ... Setting up debhelper (11.2.1) ... Setting up sbuild-build-depends-insighttoolkit4-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.27-3) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-5-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.30-16 dpkg-dev_1.19.0.5 g++-7_7.3.0-17 gcc-7_7.3.0-17 libc6-dev_2.27-3 libstdc++-7-dev_7.3.0-17 libstdc++6_8-20180425-1 linux-libc-dev_4.15.17-1 Package versions: adduser_3.117 apt_1.6.1 autoconf_2.69-11 automake_1:1.15.1-3.1 autopoint_0.19.8.1-6 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.45 bash_4.4.18-2 binutils_2.30-16 binutils-common_2.30-16 binutils-x86-64-linux-gnu_2.30-16 bsdmainutils_11.1.2 bsdutils_1:2.31.1-0.5 build-essential_12.5 bzip2_1.0.6-8.1 castxml_0.1+git20170823-2 clang-6.0_1:6.0-3 cmake_3.11.1-1 cmake-data_3.11.1-1 coreutils_8.28-1 cpp_4:7.3.0-3 cpp-7_7.3.0-17 dash_0.5.8-2.10 debconf_1.5.66 debfoster_2.7-2.1+b1 debhelper_11.2.1 debian-archive-keyring_2017.7 debianutils_4.8.4 dh-autoreconf_17 dh-strip-nondeterminism_0.041-1 diffutils_1:3.6-1 dpkg_1.19.0.5 dpkg-dev_1.19.0.5 e2fslibs_1.44.1-2 e2fsprogs_1.44.1-2 eatmydata_105-6 fakeroot_1.22-2 fdisk_2.31.1-0.5 file_1:5.33-2 findutils_4.6.0+git+20171230-2 g++_4:7.3.0-3 g++-7_7.3.0-17 gcc_4:7.3.0-3 gcc-6-base_6.4.0-17 gcc-7_7.3.0-17 gcc-7-base_7.3.0-17 gcc-8-base_8-20180425-1 gettext_0.19.8.1-6 gettext-base_0.19.8.1-6 gpgv_2.2.5-1 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5+b1 hdf5-helpers_1.10.0-patch1+docs-4+b1 hostname_3.20 icu-devtools_57.1-9 init-system-helpers_1.51 intltool-debian_0.35.0+20060710.4 lib32gcc1_1:8-20180425-1 lib32stdc++6_8-20180425-1 libacl1_2.2.52-3+b1 libaec-dev_1.0.2-1 libaec0_1.0.2-1 libapt-pkg5.0_1.6.1 libarchive-zip-perl_1.60-1 libarchive13_3.2.2-3.1 libasan4_7.3.0-17 libatomic1_8-20180425-1 libattr1_1:2.4.47-2+b2 libaudit-common_1:2.8.3-1 libaudit1_1:2.8.3-1 libbinutils_2.30-16 libblkid1_2.31.1-0.5 libbsd0_0.8.7-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-3 libc-dev-bin_2.27-3 libc6_2.27-3 libc6-dev_2.27-3 libc6-i386_2.27-3 libcap-ng0_0.7.9-1 libcc1-0_8-20180425-1 libcharls-dev_1.1.0+dfsg-2 libcharls1_1.1.0+dfsg-2 libcilkrts5_7.3.0-17 libclang-common-6.0-dev_1:6.0-3 libclang1-6.0_1:6.0-3 libcom-err2_1.44.1-2 libcomerr2_1.44.1-2 libcroco3_0.6.12-2 libcurl3_7.58.0-2 libcurl3-gnutls_7.58.0-2 libcurl4-gnutls-dev_7.58.0-2 libdb5.3_5.3.28-13.1+b1 libdcmtk-dev_3.6.2-3 libdcmtk12_3.6.2-3 libdebconfclient0_0.243 libdouble-conversion-dev_2.0.1-5 libdouble-conversion1_2.0.1-5 libdpkg-perl_1.19.0.5 libeatmydata1_105-6 libedit2_3.1-20170329-1 libexpat1_2.2.5-3 libexpat1-dev_2.2.5-3 libext2fs2_1.44.1-2 libfakeroot_1.22-2 libfdisk1_2.31.1-0.5 libffi6_3.2.1-8 libfftw3-bin_3.3.7-1+b1 libfftw3-dev_3.3.7-1+b1 libfftw3-double3_3.3.7-1+b1 libfftw3-long3_3.3.7-1+b1 libfftw3-quad3_3.3.7-1+b1 libfftw3-single3_3.3.7-1+b1 libfile-stripnondeterminism-perl_0.041-1 libgc1c2_1:7.4.2-8.2 libgcc-7-dev_7.3.0-17 libgcc1_1:8-20180425-1 libgcrypt20_1.8.2-2 libgdbm-compat4_1.14.1-6 libgdbm3_1.8.3-14 libgdbm5_1.14.1-6 libgdcm2-dev_2.8.6-1 libgdcm2.8_2.8.6-1 libgfortran4_7.3.0-17 libglib2.0-0_2.56.1-2 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1 libgomp1_8-20180425-1 libgpg-error0_1.29-4 libgssapi-krb5-2_1.16-2 libhdf5-100_1.10.0-patch1+docs-4+b1 libhdf5-cpp-100_1.10.0-patch1+docs-4+b1 libhdf5-dev_1.10.0-patch1+docs-4+b1 libhogweed4_3.4-1 libicu-dev_57.1-9 libicu57_57.1-9 libidn2-0_2.0.4-1.1 libisl15_0.18-4 libisl19_0.19-1 libitm1_8-20180425-1 libjbig-dev_2.1-3.1+b2 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjson-c3_0.12.1-1.3 libjsoncpp1_1.7.4-3 libk5crypto3_1.16-2 libkeyutils1_1.5.9-9.2 libkrb5-3_1.16-2 libkrb5support0_1.16-2 libldap-2.4-2_2.4.45+dfsg-1 libldap-common_2.4.45+dfsg-1 libllvm6.0_1:6.0-3 liblsan0_8-20180425-1 liblz4-1_1.8.1.2-1 liblzma-dev_5.2.2-1.3 liblzma5_5.2.2-1.3 liblzo2-2_2.08-1.2+b2 libmagic-mgc_1:5.33-2 libmagic1_1:5.33-2 libminc-dev_2.3.00-5 libminc2-4.0.0_2.3.00-5 libmount1_2.31.1-0.5 libmpc3_1.1.0-1 libmpfr4_3.1.6-1 libmpfr6_4.0.1-1 libmpx2_8-20180425-1 libncurses5_6.1+20180210-2 libncursesw5_6.1+20180210-2 libncursesw6_6.1+20180210-2 libnetcdf-dev_1:4.6.1-1 libnetcdf13_1:4.6.1-1 libnettle6_3.4-1 libnghttp2-14_1.31.1-1 libnifti-dev_2.0.0-2+b2 libnifti2_2.0.0-2+b2 libobjc-7-dev_7.3.0-17 libobjc4_8-20180425-1 libopenjp2-7_2.3.0-1 libp11-kit0_0.23.10-2 libpam-modules_1.1.8-3.7 libpam-modules-bin_1.1.8-3.7 libpam-runtime_1.1.8-3.7 libpam0g_1.1.8-3.7 libpcre3_2:8.39-9 libperl5.26_5.26.2-3 libpipeline1_1.5.0-1 libpng-dev_1.6.34-1 libpng16-16_1.6.34-1 libprocps6_2:3.3.14-1 libpsl5_0.20.1-1 libpython-all-dev_2.7.15~rc1-1 libpython-dev_2.7.15~rc1-1 libpython-stdlib_2.7.15~rc1-1 libpython2.7_2.7.15-1 libpython2.7-dev_2.7.15-1 libpython2.7-minimal_2.7.15-1 libpython2.7-stdlib_2.7.15-1 libquadmath0_8-20180425-1 libreadline7_7.0-3+b1 librhash0_1.3.6-2 librtmp1_2.4+20151223.gitfa8646d.1-1+b1 libsasl2-2_2.1.27~101-g0780600+dfsg-3.1 libsasl2-modules-db_2.1.27~101-g0780600+dfsg-3.1 libseccomp2_2.3.3-1 libselinux1_2.7-2+b2 libsemanage-common_2.7-2 libsemanage1_2.7-2+b2 libsepol1_2.7-1 libsigsegv2_2.12-2 libsmartcols1_2.31.1-0.5 libsocket++1_1.12.13-9 libsqlite3-0_3.23.1-1 libss2_1.44.1-2 libssh2-1_1.8.0-1 libssl-dev_1.1.0h-2 libssl1.0.2_1.0.2o-1 libssl1.1_1.1.0h-2 libstdc++-7-dev_7.3.0-17 libstdc++6_8-20180425-1 libsystemd0_238-4 libsz2_1.0.2-1 libtasn1-6_4.13-2 libtiff-dev_4.0.9-5 libtiff5_4.0.9-5 libtiff5-dev_4.0.9-5 libtiffxx5_4.0.9-5 libtimedate-perl_2.3000-2 libtinfo5_6.1+20180210-2 libtinfo6_6.1+20180210-2 libtool_2.4.6-2.1 libtsan0_8-20180425-1 libubsan0_7.3.0-17 libudev1_238-4 libunistring2_0.9.8-1 libustr-1.0-1_1.0.4-6 libuuid1_2.31.1-0.5 libuv1_1.18.0-3 libwrap0_7.6.q-27 libwrap0-dev_7.6.q-27 libxml2_2.9.4+dfsg1-6.1 libxml2-dev_2.9.4+dfsg1-6.1 libzstd1_1.3.4+dfsg-1 linux-libc-dev_4.15.17-1 login_1:4.5-1 lsb-base_9.20170808 m4_1.4.18-1 make_4.2.1-1 man-db_2.8.3-2 mawk_1.3.3-17+b3 mime-support_3.60 mount_2.31.1-0.5 multiarch-support_2.27-3 ncurses-base_6.1+20180210-2 ncurses-bin_6.1+20180210-2 passwd_1:4.5-1 patch_2.7.6-2 perl_5.26.2-3 perl-base_5.26.2-3 perl-modules-5.26_5.26.2-3 po-debconf_1.0.20 procps_2:3.3.14-1 python_2.7.15~rc1-1 python-all_2.7.15~rc1-1 python-all-dev_2.7.15~rc1-1 python-dev_2.7.15~rc1-1 python-minimal_2.7.15~rc1-1 python2.7_2.7.15-1 python2.7-dev_2.7.15-1 python2.7-minimal_2.7.15-1 readline-common_7.0-3 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-insighttoolkit4-dummy_0.invalid.0 sed_4.4-2 sensible-utils_0.0.12 swig3.0_3.0.12-1 sysvinit-utils_2.88dsf-59.10 tar_1.30+dfsg-1 util-linux_2.31.1-0.5 uuid-dev_2.31.1-0.5 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Thu Oct 5 10:07:01 2017 UTC gpgv: using RSA key 346AFED983AF9C47DFE91AFBF81E368B9B26AB98 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./insighttoolkit4_4.12.2-dfsg1-1.dsc dpkg-source: info: extracting insighttoolkit4 in /<> dpkg-source: info: unpacking insighttoolkit4_4.12.2-dfsg1.orig.tar.xz dpkg-source: info: unpacking insighttoolkit4_4.12.2-dfsg1.orig-data.tar.xz dpkg-source: info: unpacking insighttoolkit4_4.12.2-dfsg1-1.debian.tar.xz dpkg-source: info: applying nrrdio-linking.patch dpkg-source: info: applying atomic_load.patch dpkg-source: info: applying flatStructuringElementTest_fix_rescale.patch dpkg-source: info: applying ITKv3MultiResImageRegistrationTest_correct.patch dpkg-source: info: applying itk4.10-enable-system-nifti.patch dpkg-source: info: applying itk4.10.0-python-wrapping.patch dpkg-source: info: applying itk4.12.0-resource_cprobe.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=user42 PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1001 SCHROOT_GROUP=user42 SCHROOT_SESSION_ID=unstable-amd64-sbuild-335880cb-1a14-439a-9661-a8906e42ed21 SCHROOT_UID=1001 SCHROOT_USER=user42 SHELL=/bin/sh USER=user42 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package insighttoolkit4 dpkg-buildpackage: info: source version 4.12.2-dfsg1-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Gert Wollny dpkg-source --before-build insighttoolkit4-4.12.2-dfsg1 dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --builddir=BUILD --parallel dh_auto_clean -O--builddir=BUILD -O--parallel dh_clean -O--builddir=BUILD -O--parallel debian/rules build-arch dh build-arch --builddir=BUILD --parallel dh_update_autotools_config -a -O--builddir=BUILD -O--parallel debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/<>' echo "Available disk space (~50GB of space is needed for the build):" Available disk space (~50GB of space is needed for the build): df -h . Filesystem Size Used Avail Use% Mounted on /dev/xvda2 197G 12G 178G 7% /build dh_auto_configure -- -DBUILD_EXAMPLES:BOOL=ON -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=ON -DExternalData_OBJECT_STORES:PATH=/<>/data/.ExternalData/ -DCMAKE_EXPORT_COMPILE_COMMANDS:BOOL=ON -DCMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DUSE_FFTWF=ON -DITK_FORBID_DOWNLOADS:BOOL=ON -DITK_USE_FFTWD:BOOL=ON -DITK_USE_FFTWF:BOOL=ON -DITK_USE_STRICT_CONCEPT_CHECKING:BOOL=ON -DITK_USE_SYSTEM_DCMTK:BOOL=ON -DITK_USE_SYSTEM_DOUBLECONVERSION:BOOL=ON -DITK_USE_SYSTEM_EXPAT:BOOL=ON -DITK_USE_SYSTEM_FFTW:BOOL=ON -DITK_USE_SYSTEM_GDCM:BOOL=ON -DITK_USE_SYSTEM_HDF5:BOOL=ON -DITK_USE_SYSTEM_JPEG:BOOL=ON -DITK_USE_SYSTEM_PNG:BOOL=ON -DITK_USE_SYSTEM_TIFF:BOOL=ON -DITK_USE_SYSTEM_VXL:BOOL=OFF -DITK_USE_SYSTEM_ZLIB:BOOL=ON -DITK_USE_KWSTYLE:BOOL=OFF -DModule_ITKDCMTK:BOOL=ON -DModule_ITKDeprecated:BOOL=ON -DModule_ITKIOPhilipsREC:BOOL=OFF -DModule_ITKLevelSetsv4Visualization:BOOL=OFF -DModule_BridgeNumPy:BOOL=OFF -DModule_ITKReview:BOOL=ON -DModule_ITKVideoBridgeOpenCV:BOOL=OFF -DModule_ITKVideoBridgeVXL:BOOL=OFF -DModule_ITKVtkGlue:BOOL=OFF -DITKV3_COMPATIBILITY:BOOL=ON -DVCL_INCLUDE_CXX_0X:BOOL=ON -DITK_USE_SYSTEM_SWIG:BOOL=ON -DITK_USE_SYSTEM_CASTXML:BOOL=ON -DITK_WRAP_IMAGE_DIMS="2;3;4" -DITK_WRAP_unsigned_long:BOOL=ON -DITK_WRAP_double:BOOL=ON -DITK_WRAP_vector_double:BOOL=ON -DITK_WRAP_covariant_vector_double:BOOL=ON -DITK_WRAP_complex_double:BOOL=ON -DITK_WRAPPING:BOOL=1 -DITK_WRAP_PYTHON:BOOL=1 -DPython_ADDITIONAL_VERSIONS=2.7 cd BUILD && cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON "-GUnix Makefiles" -DBUILD_EXAMPLES:BOOL=ON -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=ON -DExternalData_OBJECT_STORES:PATH=/<>/data/.ExternalData/ -DCMAKE_EXPORT_COMPILE_COMMANDS:BOOL=ON -DCMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DUSE_FFTWF=ON -DITK_FORBID_DOWNLOADS:BOOL=ON -DITK_USE_FFTWD:BOOL=ON -DITK_USE_FFTWF:BOOL=ON -DITK_USE_STRICT_CONCEPT_CHECKING:BOOL=ON -DITK_USE_SYSTEM_DCMTK:BOOL=ON -DITK_USE_SYSTEM_DOUBLECONVERSION:BOOL=ON -DITK_USE_SYSTEM_EXPAT:BOOL=ON -DITK_USE_SYSTEM_FFTW:BOOL=ON -DITK_USE_SYSTEM_GDCM:BOOL=ON -DITK_USE_SYSTEM_HDF5:BOOL=ON -DITK_USE_SYSTEM_JPEG:BOOL=ON -DITK_USE_SYSTEM_PNG:BOOL=ON -DITK_USE_SYSTEM_TIFF:BOOL=ON -DITK_USE_SYSTEM_VXL:BOOL=OFF -DITK_USE_SYSTEM_ZLIB:BOOL=ON -DITK_USE_KWSTYLE:BOOL=OFF -DModule_ITKDCMTK:BOOL=ON -DModule_ITKDeprecated:BOOL=ON -DModule_ITKIOPhilipsREC:BOOL=OFF -DModule_ITKLevelSetsv4Visualization:BOOL=OFF -DModule_BridgeNumPy:BOOL=OFF -DModule_ITKReview:BOOL=ON -DModule_ITKVideoBridgeOpenCV:BOOL=OFF -DModule_ITKVideoBridgeVXL:BOOL=OFF -DModule_ITKVtkGlue:BOOL=OFF -DITKV3_COMPATIBILITY:BOOL=ON -DVCL_INCLUDE_CXX_0X:BOOL=ON -DITK_USE_SYSTEM_SWIG:BOOL=ON -DITK_USE_SYSTEM_CASTXML:BOOL=ON -DITK_WRAP_IMAGE_DIMS=2\;3\;4 -DITK_WRAP_unsigned_long:BOOL=ON -DITK_WRAP_double:BOOL=ON -DITK_WRAP_vector_double:BOOL=ON -DITK_WRAP_covariant_vector_double:BOOL=ON -DITK_WRAP_complex_double:BOOL=ON -DITK_WRAPPING:BOOL=1 -DITK_WRAP_PYTHON:BOOL=1 -DPython_ADDITIONAL_VERSIONS=2.7 -- The C compiler identification is Clang 6.0.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- The CXX compiler identification is Clang 6.0.0 -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found PythonInterp: /usr/bin/python2.7 (found version "2.7.15") -- Performing Test C_HAS_WARNING-Wno-uninitialized -- Performing Test C_HAS_WARNING-Wno-uninitialized - Success -- Performing Test C_HAS_WARNING-Wno-unused-parameter -- Performing Test C_HAS_WARNING-Wno-unused-parameter - Success -- Performing Test C_HAS_WARNING-Wall -- Performing Test C_HAS_WARNING-Wall - Success -- Performing Test C_HAS_WARNING-Wno-long-double -- Performing Test C_HAS_WARNING-Wno-long-double - Failed -- Performing Test C_HAS_WARNING-Wcast-align -- Performing Test C_HAS_WARNING-Wcast-align - Success -- Performing Test C_HAS_WARNING-Wdisabled-optimization -- Performing Test C_HAS_WARNING-Wdisabled-optimization - Success -- Performing Test C_HAS_WARNING-Wextra -- Performing Test C_HAS_WARNING-Wextra - Success -- Performing Test C_HAS_WARNING-Wformat_2 -- Performing Test C_HAS_WARNING-Wformat_2 - Success -- Performing Test C_HAS_WARNING-Winvalid-pch -- Performing Test C_HAS_WARNING-Winvalid-pch - Success -- Performing Test C_HAS_WARNING-Wno-format-nonliteral -- Performing Test C_HAS_WARNING-Wno-format-nonliteral - Success -- Performing Test C_HAS_WARNING-Wpointer-arith -- Performing Test C_HAS_WARNING-Wpointer-arith - Success -- Performing Test C_HAS_WARNING-Wshadow -- Performing Test C_HAS_WARNING-Wshadow - Success -- Performing Test C_HAS_WARNING-Wunused -- Performing Test C_HAS_WARNING-Wunused - Success -- Performing Test C_HAS_WARNING-Wwrite-strings -- Performing Test C_HAS_WARNING-Wwrite-strings - Success -- Performing Test C_HAS_WARNING-funit-at-a-time -- Performing Test C_HAS_WARNING-funit-at-a-time - Success -- Performing Test C_HAS_WARNING-Wno-strict-overflow -- Performing Test C_HAS_WARNING-Wno-strict-overflow - Success -- Performing Test CXX_HAS_WARNING-Wall -- Performing Test CXX_HAS_WARNING-Wall - Success -- Performing Test CXX_HAS_WARNING-Wno-long-double -- Performing Test CXX_HAS_WARNING-Wno-long-double - Failed -- Performing Test CXX_HAS_WARNING-Wcast-align -- Performing Test CXX_HAS_WARNING-Wcast-align - Success -- Performing Test CXX_HAS_WARNING-Wdisabled-optimization -- Performing Test CXX_HAS_WARNING-Wdisabled-optimization - Success -- Performing Test CXX_HAS_WARNING-Wextra -- Performing Test CXX_HAS_WARNING-Wextra - Success -- Performing Test CXX_HAS_WARNING-Wformat_2 -- Performing Test CXX_HAS_WARNING-Wformat_2 - Success -- Performing Test CXX_HAS_WARNING-Winvalid-pch -- Performing Test CXX_HAS_WARNING-Winvalid-pch - Success -- Performing Test CXX_HAS_WARNING-Wno-format-nonliteral -- Performing Test CXX_HAS_WARNING-Wno-format-nonliteral - Success -- Performing Test CXX_HAS_WARNING-Wpointer-arith -- Performing Test CXX_HAS_WARNING-Wpointer-arith - Success -- Performing Test CXX_HAS_WARNING-Wshadow -- Performing Test CXX_HAS_WARNING-Wshadow - Success -- Performing Test CXX_HAS_WARNING-Wunused -- Performing Test CXX_HAS_WARNING-Wunused - Success -- Performing Test CXX_HAS_WARNING-Wwrite-strings -- Performing Test CXX_HAS_WARNING-Wwrite-strings - Success -- Performing Test CXX_HAS_WARNING-funit-at-a-time -- Performing Test CXX_HAS_WARNING-funit-at-a-time - Success -- Performing Test CXX_HAS_WARNING-Wno-strict-overflow -- Performing Test CXX_HAS_WARNING-Wno-strict-overflow - Success -- Performing Test CXX_HAS_WARNING-Wno-deprecated -- Performing Test CXX_HAS_WARNING-Wno-deprecated - Success -- Performing Test CXX_HAS_WARNING-Wno-invalid-offsetof -- Performing Test CXX_HAS_WARNING-Wno-invalid-offsetof - Success -- Performing Test CXX_HAS_WARNING-Woverloaded-virtual -- Performing Test CXX_HAS_WARNING-Woverloaded-virtual - Success -- Performing Test CXX_HAS_WARNING-Wstrict-null-sentinel -- Performing Test CXX_HAS_WARNING-Wstrict-null-sentinel - Failed ATTENTION: You have enabled the use of FFTW. This library is distributed under a GPL license. By enabling this option, the ITK libraries binary that is built will be covered by a GPL license and so will any executable that is linked against these libraries. -- Enabled ITKAnisotropicSmoothing, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKAntiAlias, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKBiasCorrection, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKBinaryMathematicalMorphology, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKBioCell, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKClassifiers, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKColormap, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKCommon, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKConnectedComponents, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKConvolution, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKCurvatureFlow, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDCMTK, requested by Module_ITKDCMTK. -- Enabled ITKDICOMParser, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDeconvolution, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDeformableMesh, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDenoising, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDeprecated, requested by Module_ITKDeprecated. -- Enabled ITKDiffusionTensorImage, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDisplacementField, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDistanceMap, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKDoubleConversion, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKEigen, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKExpat, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKFEM, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKFEMRegistration, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKFFT, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKFastMarching, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKFiniteDifference, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGDCM, needed by [ITKIOImageBase-Test;ITKIOGDCM;ITKIOGDCM-Test;ITKImageStatistics-Test;ITKDeprecated-Test]. -- Enabled ITKGIFTI, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUAnisotropicSmoothing, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUCommon, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUFiniteDifference, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUImageFilterBase, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUPDEDeformableRegistration, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPURegistrationCommon, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUSmoothing, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKGPUThresholding, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKHDF5, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOBMP, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOBioRad, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOCSV, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOGDCM, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOGE, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOGIPL, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOHDF5, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOIPL, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOImageBase, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOJPEG, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOLSM, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMRC, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMesh, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOMeta, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIONIFTI, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIONRRD, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOPNG, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIORAW, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOSiemens, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOSpatialObjects, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOStimulate, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOTIFF, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOTransformBase, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOTransformHDF5, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOTransformInsightLegacy, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOTransformMatlab, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOVTK, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIOXML, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageAdaptors, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageCompare, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageCompose, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageFeature, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageFilterBase, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageFunction, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageFusion, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageGradient, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageGrid, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageIntensity, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageLabel, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageNoise, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageSources, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKImageStatistics, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKIntegratedTest, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKJPEG, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKKLMRegionGrowing, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKKWIML, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKKWSys, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKLabelMap, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKLabelVoting, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKLevelSets, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKLevelSetsv4, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKMarkovRandomFieldsClassifiers, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKMathematicalMorphology, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKMesh, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKMetaIO, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKMetricsv4, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKNIFTI, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKNarrowBand, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKNetlib, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKNeuralNetworks, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKNrrdIO, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKOpenJPEG, needed by [ITKReview]. -- Enabled ITKOptimizers, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKOptimizersv4, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKPDEDeformableRegistration, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKPNG, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKPath, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKPolynomials, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKQuadEdgeMesh, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKQuadEdgeMeshFiltering, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKRegionGrowing, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKRegistrationCommon, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKRegistrationMethodsv4, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKReview, requested by Module_ITKReview. -- Enabled ITKSignedDistanceFunction, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKSmoothing, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKSpatialFunction, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKSpatialObjects, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKStatistics, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKTIFF, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKTestKernel, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKThresholding, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKTransform, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKTransformFactory, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKV3Compatibility, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVNL, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVNLInstantiation, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVTK, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVideoCore, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVideoFiltering, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVideoIO, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKVoronoi, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKWatersheds, requested by ITK_BUILD_DEFAULT_MODULES. -- Enabled ITKZLIB, requested by ITK_BUILD_DEFAULT_MODULES. -- Checking whether header cstdio is available -- Checking whether header cstdio is available - yes -- Checking for Large File Support -- Checking for Large File Support - yes -- Checking whether C++ compiler has 'long long' -- Checking whether C++ compiler has 'long long' - yes -- Checking whether C++ compiler has '__int64' -- Checking whether C++ compiler has '__int64' - no -- Checking whether wstring is available -- Checking whether wstring is available - yes -- Checking whether C compiler has ptrdiff_t in stddef.h -- Checking whether C compiler has ptrdiff_t in stddef.h - yes -- Checking whether C compiler has ssize_t in unistd.h -- Checking whether C compiler has ssize_t in unistd.h - yes -- Checking whether CXX compiler has setenv -- Checking whether CXX compiler has setenv - yes -- Checking whether CXX compiler has unsetenv -- Checking whether CXX compiler has unsetenv - yes -- Checking whether CXX compiler has environ in stdlib.h -- Checking whether CXX compiler has environ in stdlib.h - no -- Checking whether CXX compiler has utimes -- Checking whether CXX compiler has utimes - yes -- Checking whether CXX compiler has utimensat -- Checking whether CXX compiler has utimensat - yes -- Checking whether CXX compiler struct stat has st_mtim member -- Checking whether CXX compiler struct stat has st_mtim member - yes -- Checking whether CXX compiler struct stat has st_mtimespec member -- Checking whether CXX compiler struct stat has st_mtimespec member - no -- Looking for include files sys/types.h, ifaddrs.h -- Looking for include files sys/types.h, ifaddrs.h - found -- Checking whether CXX compiler has rlimit64 -- Checking whether CXX compiler has rlimit64 - yes -- Checking whether CXX compiler has atol -- Checking whether CXX compiler has atol - yes -- Checking whether CXX compiler has atoll -- Checking whether CXX compiler has atoll - yes -- Checking whether CXX compiler has _atoi64 -- Checking whether CXX compiler has _atoi64 - no -- Looking for C++ include execinfo.h -- Looking for C++ include execinfo.h - found -- Checking whether backtrace works with this C++ compiler -- Checking whether backtrace works with this C++ compiler - yes -- Looking for C++ include dlfcn.h -- Looking for C++ include dlfcn.h - found -- Checking whether dladdr works with this C++ compiler -- Checking whether dladdr works with this C++ compiler - yes -- Looking for C++ include cxxabi.h -- Looking for C++ include cxxabi.h - found -- Checking whether cxxabi works with this C++ compiler -- Checking whether cxxabi works with this C++ compiler - yes -- Checking whether CXX compiler has getloadavg -- Checking whether CXX compiler has getloadavg - yes -- Checking whether is available -- Checking whether is available - yes CMake Deprecation Warning at Modules/ThirdParty/VNL/src/vxl/CMakeLists.txt:28 (cmake_policy): The OLD behavior for policy CMP0033 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. -- Performing Test VCL_HAS_BOOL -- Performing Test VCL_HAS_BOOL - Success -- Performing Test VCL_HAS_LONG_LONG -- Performing Test VCL_HAS_LONG_LONG - Success -- Performing Test VCL_HAS_TYPENAME -- Performing Test VCL_HAS_TYPENAME - Success -- Performing Test VCL_HAS_EXPORT -- Performing Test VCL_HAS_EXPORT - Success -- Performing Test VCL_HAS_MUTABLE -- Performing Test VCL_HAS_MUTABLE - Success -- Performing Test VCL_HAS_EXPLICIT -- Performing Test VCL_HAS_EXPLICIT - Success -- Performing Test VCL_HAS_DYNAMIC_CAST -- Performing Test VCL_HAS_DYNAMIC_CAST - Success -- Performing Test VCL_HAS_RTTI -- Performing Test VCL_HAS_RTTI - Success -- Performing Test VCL_DEFAULT_VALUE -- Performing Test VCL_DEFAULT_VALUE - Success -- Performing Test VCL_HAS_MEMBER_TEMPLATES -- Performing Test VCL_HAS_MEMBER_TEMPLATES - Success -- Performing Test VCL_CAN_DO_PARTIAL_SPECIALIZATION -- Performing Test VCL_CAN_DO_PARTIAL_SPECIALIZATION - Success -- Performing Test VCL_ALLOWS_INLINE_INSTANTIATION -- Performing Test VCL_ALLOWS_INLINE_INSTANTIATION - Success -- Performing Test VCL_NEEDS_INLINE_INSTANTIATION -- Performing Test VCL_NEEDS_INLINE_INSTANTIATION - Success -- Performing Test VCL_CAN_DO_STATIC_TEMPLATE_MEMBER -- Performing Test VCL_CAN_DO_STATIC_TEMPLATE_MEMBER - Success -- Performing Test VCL_CAN_DO_NON_TYPE_FUNCTION_TEMPLATE_PARAMETER -- Performing Test VCL_CAN_DO_NON_TYPE_FUNCTION_TEMPLATE_PARAMETER - Success -- Performing Test VCL_NEED_FRIEND_FOR_TEMPLATE_OVERLOAD -- Performing Test VCL_NEED_FRIEND_FOR_TEMPLATE_OVERLOAD - Success -- Performing Test VCL_OVERLOAD_CAST -- Performing Test VCL_OVERLOAD_CAST - Failed -- Performing Test VCL_NULL_TMPL_ARGS -- Performing Test VCL_NULL_TMPL_ARGS - Failed -- Performing Test VCL_NO_STATIC_DATA_MEMBERS -- Performing Test VCL_NO_STATIC_DATA_MEMBERS - Success -- Performing Test VCL_HAS_TEMPLATE_SYMBOLS -- Performing Try-Run Test VCL_HAS_TEMPLATE_SYMBOLS - Test Compilation Failed -- Performing Test VCL_CAN_DO_COMPLETE_DEFAULT_TYPE_PARAMETER -- Performing Test VCL_CAN_DO_COMPLETE_DEFAULT_TYPE_PARAMETER - Success -- Performing Test VCL_CAN_DO_TEMPLATE_DEFAULT_TYPE_PARAMETER -- Performing Test VCL_CAN_DO_TEMPLATE_DEFAULT_TYPE_PARAMETER - Success -- Performing Test VCL_TEMPLATE_MATCHES_TOO_OFTEN -- Performing Test VCL_TEMPLATE_MATCHES_TOO_OFTEN - Success -- Performing Test VCL_HAS_EXCEPTIONS -- Performing Test VCL_HAS_EXCEPTIONS - Success -- Performing Test VCL_HAS_NAMESPACES -- Performing Test VCL_HAS_NAMESPACES - Success -- Performing Test VCL_ALLOWS_NAMESPACE_STD -- Performing Test VCL_ALLOWS_NAMESPACE_STD - Success -- Performing Test VCL_NEEDS_NAMESPACE_STD -- Performing Test VCL_NEEDS_NAMESPACE_STD - Failed -- Performing Test VCL_HAS_SLICED_DESTRUCTOR_BUG -- Performing Test VCL_HAS_SLICED_DESTRUCTOR_BUG - Success -- Performing Test VCL_HAS_WORKING_STRINGSTREAM -- Performing Test VCL_HAS_WORKING_STRINGSTREAM - Success -- Performing Test VXL_UNISTD_USLEEP_IS_VOID -- Performing Test VXL_UNISTD_USLEEP_IS_VOID - Success -- Performing Test VXL_STDLIB_HAS_QSORT -- Performing Test VXL_STDLIB_HAS_QSORT - Success -- Performing Test VXL_C_MATH_HAS_LROUND -- Performing Test VXL_C_MATH_HAS_LROUND - Success -- Performing Test VCL_HAS_LFS -- Performing Test VCL_HAS_LFS - Success -- Performing Test VXL_HAS_DBGHELP_H -- Performing Test VXL_HAS_DBGHELP_H - Failed -- Performing Test VCL_DEFINE_SPECIALIZATION -- Performing Test VCL_DEFINE_SPECIALIZATION - Success -- Performing Test VCL_CANNOT_SPECIALIZE_CV -- Performing Test VCL_CANNOT_SPECIALIZE_CV - Success -- Performing Test VXL_PIC_COMPATIBLE -- Performing Test VXL_PIC_COMPATIBLE - Success -- Looking for C++ include cassert -- Looking for C++ include cassert - found -- Looking for C++ include ciso646 -- Looking for C++ include ciso646 - found -- Looking for C++ include csetjmp -- Looking for C++ include csetjmp - found -- Looking for C++ include cstdio -- Looking for C++ include cstdio - found -- Looking for C++ include ctime -- Looking for C++ include ctime - found -- Looking for C++ include cctype -- Looking for C++ include cctype - found -- Looking for C++ include climits -- Looking for C++ include climits - found -- Looking for C++ include csignal -- Looking for C++ include csignal - found -- Looking for C++ include cstdlib -- Looking for C++ include cstdlib - found -- Looking for C++ include cwchar -- Looking for C++ include cwchar - found -- Looking for C++ include cerrno -- Looking for C++ include cerrno - found -- Looking for C++ include clocale -- Looking for C++ include clocale - found -- Looking for C++ include cstdarg -- Looking for C++ include cstdarg - found -- Looking for C++ include cstring -- Looking for C++ include cstring - found -- Looking for C++ include cwctype -- Looking for C++ include cwctype - found -- Looking for C++ include cfloat -- Looking for C++ include cfloat - found -- Looking for C++ include cmath -- Looking for C++ include cmath - found -- Looking for C++ include cstddef -- Looking for C++ include cstddef - found -- Looking for C++ include algorithm -- Looking for C++ include algorithm - found -- Looking for C++ include iomanip -- Looking for C++ include iomanip - found -- Looking for C++ include list -- Looking for C++ include list - found -- Looking for C++ include ostream -- Looking for C++ include ostream - found -- Looking for C++ include streambuf -- Looking for C++ include streambuf - found -- Looking for C++ include bitset -- Looking for C++ include bitset - found -- Looking for C++ include ios -- Looking for C++ include ios - found -- Looking for C++ include locale -- Looking for C++ include locale - found -- Looking for C++ include queue -- Looking for C++ include queue - found -- Looking for C++ include string -- Looking for C++ include string - found -- Looking for C++ include complex -- Looking for C++ include complex - found -- Looking for C++ include iosfwd -- Looking for C++ include iosfwd - found -- Looking for C++ include map -- Looking for C++ include map - found -- Looking for C++ include set -- Looking for C++ include set - found -- Looking for C++ include typeinfo -- Looking for C++ include typeinfo - found -- Looking for C++ include deque -- Looking for C++ include deque - found -- Looking for C++ include iostream -- Looking for C++ include iostream - found -- Looking for C++ include memory -- Looking for C++ include memory - found -- Looking for C++ include sstream -- Looking for C++ include sstream - found -- Looking for C++ include utility -- Looking for C++ include utility - found -- Looking for C++ include exception -- Looking for C++ include exception - found -- Looking for C++ include istream -- Looking for C++ include istream - found -- Looking for C++ include new -- Looking for C++ include new - found -- Looking for C++ include stack -- Looking for C++ include stack - found -- Looking for C++ include valarray -- Looking for C++ include valarray - found -- Looking for C++ include fstream -- Looking for C++ include fstream - found -- Looking for C++ include iterator -- Looking for C++ include iterator - found -- Looking for C++ include numeric -- Looking for C++ include numeric - found -- Looking for C++ include stdexcept -- Looking for C++ include stdexcept - found -- Looking for C++ include vector -- Looking for C++ include vector - found -- Looking for C++ include functional -- Looking for C++ include functional - found -- Looking for C++ include strstream -- Looking for C++ include strstream - found -- Looking for C++ include iso646.h -- Looking for C++ include iso646.h - found -- Looking for C++ include emmintrin.h -- Looking for C++ include emmintrin.h - found -- Looking for C++ include windows.h -- Looking for C++ include windows.h - not found -- Looking for include file assert.h -- Looking for include file assert.h - found -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Looking for include file semaphore.h -- Looking for include file semaphore.h - found -- Looking for include file dlfcn.h -- Looking for include file dlfcn.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file limits.h -- Looking for include file limits.h - found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file memory.h -- Looking for include file memory.h - found -- Looking for include file search.h -- Looking for include file search.h - found -- Looking for include file stdint.h -- Looking for include file stdint.h - found -- Looking for include file stdlib.h -- Looking for include file stdlib.h - found -- Looking for include file strings.h -- Looking for include file strings.h - found -- Looking for include file string.h -- Looking for include file string.h - found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/times.h -- Looking for include file sys/times.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for C++ include tr1/memory -- Looking for C++ include tr1/memory - found -- Looking for std::shared_ptr -- Looking for std::shared_ptr - found -- Looking for std::tr1::shared_ptr -- Looking for std::tr1::shared_ptr - not found. -- Looking for std::tr1::shared_ptr -- Looking for std::tr1::shared_ptr - found -- Performing Test VXL_HAS_SSE2_HARDWARE_SUPPORT -- Performing Test VXL_HAS_SSE2_HARDWARE_SUPPORT - Success -- Performing Test VXL_HAS_MM_MALLOC -- Performing Test VXL_HAS_MM_MALLOC - Success -- Performing Test VXL_HAS_ALIGNED_MALLOC -- Performing Test VXL_HAS_ALIGNED_MALLOC - Failed -- Performing Test VXL_HAS_MINGW_ALIGNED_MALLOC -- Performing Test VXL_HAS_MINGW_ALIGNED_MALLOC - Failed -- Performing Test VXL_HAS_POSIX_MEMALIGN -- Performing Test VXL_HAS_POSIX_MEMALIGN - Failed -- Performing Test VCL_COMPLEX_POW_WORKS -- Performing Test VCL_COMPLEX_POW_WORKS - Success -- Performing Test VXL_HAS_STD_ISNAN -- Performing Test VXL_HAS_STD_ISNAN - Success -- Performing Test VXL_HAS_STD_ISINF -- Performing Test VXL_HAS_STD_ISINF - Success -- Performing Test VXL_HAS_STD_ISFINITE -- Performing Test VXL_HAS_STD_ISFINITE - Success -- Performing Test VXL_HAS_STD_ISNORMAL -- Performing Test VXL_HAS_STD_ISNORMAL - Success -- Looking for sqrtf -- Looking for sqrtf - found -- Looking for finite -- Looking for finite - found -- Looking for finitef -- Looking for finitef - found -- Looking for finitel -- Looking for finitel - found -- Looking for finite -- Looking for finite - not found -- Looking for lrand48 -- Looking for lrand48 - found -- Looking for drand48 -- Looking for drand48 - found -- Looking for srand48 -- Looking for srand48 - found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Performing Test VCL_CAN_DO_IMPLICIT_TEMPLATES -- Performing Test VCL_CAN_DO_IMPLICIT_TEMPLATES - Success -- Performing Test VCL_CHAR_IS_SIGNED -- Performing Test VCL_CHAR_IS_SIGNED - Success -- Looking for 8-bit int. [Checking char...] -- Looking for 8-bit int. Found char. -- Looking for 8-bit int. [Checking short...] -- Looking for 8-bit int. [Checking char...] -- Looking for 8-bit int. Found char. -- Looking for 16-bit int. [Checking char...] -- Looking for 16-bit int. [Checking int...] -- Looking for 16-bit int. [Checking short...] -- Looking for 16-bit int. Found short. -- Looking for 32-bit int. [Checking short...] -- Looking for 32-bit int. [Checking long...] -- Looking for 32-bit int. [Checking int...] -- Looking for 32-bit int. Found int. -- Looking for 64-bit int. [Checking __int64...] -- Looking for 64-bit int. [Checking long long...] -- Looking for 64-bit int. [Checking long...] -- Looking for 64-bit int. Found long. -- Looking for 32-bit float. [Checking long double...] -- Looking for 32-bit float. [Checking double...] -- Looking for 32-bit float. [Checking float...] -- Looking for 32-bit float. Found float. -- Looking for 64-bit float. [Checking float...] -- Looking for 64-bit float. [Checking long double...] -- Looking for 64-bit float. [Checking double...] -- Looking for 64-bit float. Found double. -- Looking for 96-bit float. [Checking float...] -- Looking for 96-bit float. [Checking double...] -- Looking for 96-bit float. [Checking long double...] -- Looking for 96-bit float. Not found. -- Looking for 128-bit float. [Checking float...] -- Looking for 128-bit float. [Checking double...] -- Looking for 128-bit float. [Checking long double...] -- Looking for 128-bit float. Found long double. -- Looking for C++ include unistd.h -- Looking for C++ include unistd.h - found -- Looking for useconds_t -- Looking for useconds_t - found -- Looking for intptr_t -- Looking for intptr_t - found -- Looking for ualarm -- Looking for ualarm - found -- Looking for usleep -- Looking for usleep - found -- Looking for lchown -- Looking for lchown - found -- Looking for pread -- Looking for pread - found -- Looking for pwrite -- Looking for pwrite - found -- Looking for tell -- Looking for tell - not found -- Looking for getpid -- Looking for getpid - found -- Looking for gethostname -- Looking for gethostname - found -- Looking for C++ include limits -- Looking for C++ include limits - found -- Performing Test VCL_NUMERIC_LIMITS_HAS_INFINITY -- Performing Test VCL_NUMERIC_LIMITS_HAS_INFINITY - Success -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Check if the system is big endian -- Searching 16 bit integer -- Using unsigned short -- Check if the system is big endian - little endian -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Checking to see if this platform has the __FUNCTION__ C-Preprocessor directive -- Checking to see if this platform supports has the __FUNCTION__ C-Preprocessor directive - yes -- Looking for include file fenv.h -- Looking for include file fenv.h - found -- Looking for include file emmintrin.h -- Looking for include file emmintrin.h - found -- Performing Test ITK_COMPILER_SUPPORTS_SSE2_64 -- Performing Test ITK_COMPILER_SUPPORTS_SSE2_64 - Success -- Performing Test ITK_COMPILER_SUPPORTS_SSE2_32 -- Performing Test ITK_COMPILER_SUPPORTS_SSE2_32 - Success -- Performing Test ITK_COMPILER_DOES_NOT_NEED_MSSE2_FLAG -- Performing Test ITK_COMPILER_DOES_NOT_NEED_MSSE2_FLAG - Success -- Checking for builtin __sync_add_and_fetch -- Checking for builtin __sync_add_and_fetch -- success -- Looking for C++ include tr1/type_traits -- Looking for C++ include tr1/type_traits - found -- Looking for C++ include type_traits -- Looking for C++ include type_traits - found -- Performing Test ITK_PRIVATE_DYNAMIC_CAST - Success -- The imported target "vtkgdcm" references the file "/usr/lib/x86_64-linux-gnu/libvtkgdcm.so.2.8.6" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmsharpglue" references the file "/usr/lib/x86_64-linux-gnu/libvtkgdcmsharpglue.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmJava" references the file "/usr/lib/x86_64-linux-gnu/jni/libvtkgdcmJava.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmPython" references the file "/usr/lib/python/dist-packages/libvtkgdcmPython.so" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "vtkgdcmPythonD" references the file "/usr/lib/x86_64-linux-gnu/libvtkgdcmPythonD.so.2.8.6" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmdump" references the file "/usr/bin/gdcmdump" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmdiff" references the file "/usr/bin/gdcmdiff" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmraw" references the file "/usr/bin/gdcmraw" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmscanner" references the file "/usr/bin/gdcmscanner" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmanon" references the file "/usr/bin/gdcmanon" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmgendir" references the file "/usr/bin/gdcmgendir" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmimg" references the file "/usr/bin/gdcmimg" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmconv" references the file "/usr/bin/gdcmconv" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmtar" references the file "/usr/bin/gdcmtar" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcminfo" references the file "/usr/bin/gdcminfo" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmscu" references the file "/usr/bin/gdcmscu" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmxml" references the file "/usr/bin/gdcmxml" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmpap3" references the file "/usr/bin/gdcmpap3" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- The imported target "gdcmpdf" references the file "/usr/bin/gdcmpdf" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/x86_64-linux-gnu/gdcm-2.8/GDCMTargets.cmake" but not all the files it references. -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Found JPEG: /usr/lib/x86_64-linux-gnu/libjpeg.so -- Check the value of the 22nd bit of a 32-bit quiet-NaN -- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1 -- Found PNG: /usr/lib/x86_64-linux-gnu/libpng.so (found version "1.6.34") -- Found TIFF: /usr/lib/x86_64-linux-gnu/libtiff.so (found version "4.0.9") -- Check size of TIFFFieldReadCount -- Check size of TIFFFieldReadCount - done -- Check size of TIFFField* -- Check size of TIFFField* - done -- Check for STD namespace -- Check for STD namespace - found -- Found EXPAT: /usr/lib/x86_64-linux-gnu/libexpat.so (found version "2.2.5") -- HDF5: Using hdf5 compiler wrapper to determine CXX configuration -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.0.1") found components: CXX C -- Found SWIG: /usr/bin/swig3.0 (found version "3.0.12") -- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython2.7.so (found version "2.7.15") -- Performing Test ITK_UNDEFINED_SYMBOLS_ALLOWED - Success -- ITKPyBase: Creating module. -- ITKCommon: Creating module. -- ITKCommon: Creating itkFixedArray submodule. -- ITKCommon: Creating itkVector submodule. -- ITKCommon: Creating itkCovariantVector submodule. -- ITKCommon: Creating itkPoint submodule. -- ITKCommon: Creating itkTriangleHelper submodule. -- ITKCommon: Creating itkVariableSizeMatrix submodule. -- ITKCommon: Creating itkVersor submodule. -- ITKCommon: Creating stdcomplex submodule. -- ITKCommon: Creating vnl_c_vector submodule. -- ITKCommon: Creating vnl_cost_function submodule. -- ITKCommon: Creating vnl_diag_matrix submodule. -- ITKCommon: Creating vnl_file_matrix submodule. -- ITKCommon: Creating vnl_file_vector submodule. -- ITKCommon: Creating vnl_fortran_copy submodule. -- ITKCommon: Creating vnl_least_squares_function submodule. -- ITKCommon: Creating vnl_matrix_fixed submodule. -- ITKCommon: Creating vnl_matrix_fixed_ref submodule. -- ITKCommon: Creating vnl_matrix_ref submodule. -- ITKCommon: Creating vnl_vector_ref submodule. -- ITKCommon: Creating vnl_matrix submodule. -- ITKCommon: Creating vnl_vector submodule. -- ITKCommon: Creating vnl_unary_function submodule. -- ITKCommon: Creating ITKCommonBase submodule. -- ITKCommon: Creating itkSize submodule. -- ITKCommon: Creating itkOffset submodule. -- ITKCommon: Creating itkArray submodule. -- ITKCommon: Creating itkIndex submodule. -- ITKCommon: Creating itkContinuousIndex submodule. -- ITKCommon: Creating itkMatrix submodule. -- ITKCommon: Creating itkVectorContainer submodule. -- ITKCommon: Creating itkMapContainer submodule. -- ITKCommon: Creating itkBoundingBox submodule. -- ITKCommon: Creating itkRGBPixel submodule. -- ITKCommon: Creating itkRGBAPixel submodule. -- ITKCommon: Creating itkVariableLengthVector submodule. -- ITKCommon: Creating itkImageRegion submodule. -- ITKCommon: Creating itkSymmetricSecondRankTensor submodule. -- ITKCommon: Creating itkImage submodule. -- ITKCommon: Creating itkVectorImage submodule. -- ITKCommon: Creating itkNeighborhood submodule. -- ITKCommon: Creating itkImageSourceCommon submodule. -- ITKCommon: Creating itkImageSource submodule. -- ITKCommon: Creating itkImageToImageFilterCommon submodule. -- ITKCommon: Creating itkImageToImageFilterA submodule. -- ITKCommon: Creating itkImageToImageFilterB submodule. -- ITKCommon: Creating itkInPlaceImageFilterA submodule. -- ITKCommon: Creating itkInPlaceImageFilterB submodule. -- ITKCommon: Creating itkDefaultDynamicMeshTraits submodule. -- ITKCommon: Creating itkDefaultStaticMeshTraits submodule. -- ITKCommon: Creating itkFunctionBase submodule. -- ITKCommon: Creating itkArray2D submodule. -- ITKCommon: Creating itkBSplineInterpolationWeightFunction submodule. -- ITKCommon: Creating itkDiffusionTensor3D submodule. -- ITKCommon: Creating itkExtractImageFilter submodule. -- ITKCommon: Creating itkImageBoundaryCondition submodule. -- ITKCommon: Creating itkImageDuplicator submodule. -- ITKCommon: Creating itkImageTransformer submodule. -- ITKCommon: Creating itkImportImageFilter submodule. -- ITKCommon: Creating itkKernelFunctionBase submodule. -- ITKCommon: Creating itkMetaDataObject submodule. -- ITKCommon: Creating itkMinimumMaximumImageCalculator submodule. -- ITKCommon: Creating itkNumericTraits submodule. -- ITKCommon: Creating itkOptimizerParameters submodule. -- ITKCommon: Creating itkPointSet submodule. -- ITKCommon: Creating itkSimpleDataObjectDecorator submodule. -- ITKCommon: Creating itkSpatialFunction submodule. -- ITKCommon: Creating itkSpatialOrientation submodule. -- ITKCommon: Creating itkStreamingImageFilter submodule. -- ITKFiniteDifference: Creating module. -- ITKFiniteDifference: Creating itkDenseFiniteDifferenceImageFilter submodule. -- ITKFiniteDifference: Creating itkFiniteDifferenceFunction submodule. -- ITKFiniteDifference: Creating itkFiniteDifferenceImageFilter submodule. -- ITKImageFilterBase: Creating module. -- ITKImageFilterBase: Creating itkBoxImageFilter submodule. -- ITKImageFilterBase: Creating itkCastImageFilter submodule. -- ITKImageFilterBase: Creating itkNoiseImageFilter submodule. -- ITKImageFilterBase: Creating itkRecursiveSeparableImageFilter submodule. -- ITKImageFilterBase: Creating itkVectorCastImageFilter submodule. -- ITKCurvatureFlow: Creating module. -- ITKCurvatureFlow: Creating itkCurvatureFlowImageFilter submodule. -- ITKCurvatureFlow: Creating itkMinMaxCurvatureFlowImageFilter submodule. -- ITKCurvatureFlow: Creating itkBinaryMinMaxCurvatureFlowImageFilter submodule. -- ITKStatistics: Creating module. -- ITKStatistics: Creating itkSample submodule. -- ITKStatistics: Creating itkHistogram submodule. -- ITKStatistics: Creating itkListSample submodule. -- ITKStatistics: Creating itkMembershipFunctionBase submodule. -- ITKStatistics: Creating itkDistanceMetric submodule. -- ITKStatistics: Creating itkEuclideanDistanceMetric submodule. -- ITKStatistics: Creating itkHistogramToEntropyImageFilter submodule. -- ITKStatistics: Creating itkHistogramToIntensityImageFilter submodule. -- ITKStatistics: Creating itkHistogramToLogProbabilityImageFilter submodule. -- ITKStatistics: Creating itkHistogramToProbabilityImageFilter submodule. -- ITKStatistics: Creating itkHistogramToRunLengthFeaturesFilter submodule. -- ITKStatistics: Creating itkHistogramToTextureFeaturesFilter submodule. -- ITKStatistics: Creating itkImageToHistogramFilter submodule. -- ITKStatistics: Creating itkKdTree submodule. -- ITKStatistics: Creating itkMaskedImageToHistogramFilter submodule. -- ITKStatistics: Creating itkNormalVariateGenerator submodule. -- ITKStatistics: Creating itkScalarImageToCooccurrenceMatrixFilter submodule. -- ITKStatistics: Creating itkScalarImageToHistogramGenerator submodule. -- ITKStatistics: Creating itkScalarImageToRunLengthFeaturesFilter submodule. -- ITKStatistics: Creating itkScalarImageToRunLengthMatrixFilter submodule. -- ITKStatistics: Creating itkScalarImageToTextureFeaturesFilter submodule. -- ITKTransform: Creating module. -- ITKTransform: Creating itkCompositeTransform submodule. -- ITKTransform: Creating itkTransformBase submodule. -- ITKTransform: Creating itkMatrixOffsetTransformBase submodule. -- ITKTransform: Creating itkEuler2DTransform submodule. -- ITKTransform: Creating itkEuler3DTransform submodule. -- ITKTransform: Creating itkMultiTransform submodule. -- ITKTransform: Creating itkVersorTransform submodule. -- ITKTransform: Creating itkVersorRigid3DTransform submodule. -- ITKTransform: Creating itkSimilarity2DTransform submodule. -- ITKTransform: Creating itkSimilarity3DTransform submodule. -- ITKTransform: Creating itkAffineTransform submodule. -- ITKTransform: Creating itkScalableAffineTransform submodule. -- ITKTransform: Creating itkScaleTransform submodule. -- ITKTransform: Creating itkKernelTransform submodule. -- ITKTransform: Creating itkAzimuthElevationToCartesianTransform submodule. -- ITKTransform: Creating itkBSplineBaseTransform submodule. -- ITKTransform: Creating itkBSplineTransform submodule. -- ITKTransform: Creating itkCenteredAffineTransform submodule. -- ITKTransform: Creating itkCenteredEuler3DTransform submodule. -- ITKTransform: Creating itkCenteredRigid2DTransform submodule. -- ITKTransform: Creating itkCenteredSimilarity2DTransform submodule. -- ITKTransform: Creating itkElasticBodyReciprocalSplineKernelTransform submodule. -- ITKTransform: Creating itkElasticBodySplineKernelTransform submodule. -- ITKTransform: Creating itkFixedCenterOfRotationAffineTransform submodule. -- ITKTransform: Creating itkIdentityTransform submodule. -- ITKTransform: Creating itkQuaternionRigidTransform submodule. -- ITKTransform: Creating itkRigid2DTransform submodule. -- ITKTransform: Creating itkRigid3DPerspectiveTransform submodule. -- ITKTransform: Creating itkRigid3DTransform submodule. -- ITKTransform: Creating itkScaleLogarithmicTransform submodule. -- ITKTransform: Creating itkScaleSkewVersor3DTransform submodule. -- ITKTransform: Creating itkScaleVersor3DTransform submodule. -- ITKTransform: Creating itkThinPlateR2LogRSplineKernelTransform submodule. -- ITKTransform: Creating itkThinPlateSplineKernelTransform submodule. -- ITKTransform: Creating itkTranslationTransform submodule. -- ITKTransform: Creating itkVolumeSplineKernelTransform submodule. -- ITKImageFunction: Creating module. -- ITKImageFunction: Creating itkImageFunctionBase submodule. -- ITKImageFunction: Creating itkBSplineDecompositionImageFilter submodule. -- ITKImageFunction: Creating itkBSplineInterpolateImageFunction submodule. -- ITKImageFunction: Creating itkBSplineResampleImageFunction submodule. -- ITKImageFunction: Creating itkInterpolateImageFunction submodule. -- ITKImageFunction: Creating itkLinearInterpolateImageFunction submodule. -- ITKImageFunction: Creating itkNearestNeighborInterpolateImageFunction submodule. -- ITKImageFunction: Creating itkRayCastInterpolateImageFunction submodule. -- ITKImageGrid: Creating module. -- ITKImageGrid: Creating itkPadImageFilterBase submodule. -- ITKImageGrid: Creating itkPadImageFilter submodule. -- ITKImageGrid: Creating itkBSplineDownsampleImageFilter submodule. -- ITKImageGrid: Creating itkBSplineUpsampleImageFilter submodule. -- ITKImageGrid: Creating itkBinShrinkImageFilter submodule. -- ITKImageGrid: Creating itkChangeInformationImageFilter submodule. -- ITKImageGrid: Creating itkConstantPadImageFilter submodule. -- ITKImageGrid: Creating itkCropImageFilter submodule. -- ITKImageGrid: Creating itkCyclicShiftImageFilter submodule. -- ITKImageGrid: Creating itkExpandImageFilter submodule. -- ITKImageGrid: Creating itkFlipImageFilter submodule. -- ITKImageGrid: Creating itkInterpolateImageFilter submodule. -- ITKImageGrid: Creating itkMirrorPadImageFilter submodule. -- ITKImageGrid: Creating itkOrientImageFilter submodule. -- ITKImageGrid: Creating itkPasteImageFilter submodule. -- ITKImageGrid: Creating itkPermuteAxesImageFilter submodule. -- ITKImageGrid: Creating itkRegionOfInterestImageFilter submodule. -- ITKImageGrid: Creating itkResampleImageFilter submodule. -- ITKImageGrid: Creating itkShrinkImageFilter submodule. -- ITKImageGrid: Creating itkSliceBySliceImageFilter submodule. -- ITKImageGrid: Creating itkTileImageFilter submodule. -- ITKImageGrid: Creating itkVectorResampleImageFilter submodule. -- ITKImageGrid: Creating itkWarpImageFilter submodule. -- ITKImageGrid: Creating itkWrapPadImageFilter submodule. -- ITKImageGrid: Creating itkZeroFluxNeumannPadImageFilter submodule. -- ITKAnisotropicSmoothing: Creating module. -- ITKAnisotropicSmoothing: Creating itkAnisotropicDiffusionImageFilter submodule. -- ITKAnisotropicSmoothing: Creating itkCurvatureAnisotropicDiffusionImageFilter submodule. -- ITKAnisotropicSmoothing: Creating itkGradientAnisotropicDiffusionImageFilter submodule. -- ITKAnisotropicSmoothing: Creating itkVectorCurvatureAnisotropicDiffusionImageFilter submodule. -- ITKAnisotropicSmoothing: Creating itkVectorGradientAnisotropicDiffusionImageFilter submodule. -- ITKIOImageBase: Creating module. -- ITKIOImageBase: Creating ITKIOImageBaseBase submodule. -- ITKIOImageBase: Creating itkImageFileReader submodule. -- ITKIOImageBase: Creating itkImageFileWriter submodule. -- ITKIOImageBase: Creating itkImageSeriesReader submodule. -- ITKIOImageBase: Creating itkImageSeriesWriter submodule. -- ITKIOBMP: Creating module. -- ITKIOBMP: Creating itkBMPImageIO submodule. -- ITKIOGDCM: Creating module. -- ITKIOGDCM: Creating itkGDCMImageIO submodule. -- ITKIOGIPL: Creating module. -- ITKIOGIPL: Creating itkGiplImageIO submodule. -- ITKIOJPEG: Creating module. -- ITKIOJPEG: Creating itkJPEGImageIO submodule. -- ITKIOMeta: Creating module. -- ITKIOMeta: Creating itkMetaImageIO submodule. -- ITKIONIFTI: Creating module. -- ITKIONIFTI: Creating itkNiftiImageIO submodule. -- ITKIONRRD: Creating module. -- ITKIONRRD: Creating itkNrrdImageIO submodule. -- ITKIOPNG: Creating module. -- ITKIOPNG: Creating itkPNGImageIO submodule. -- ITKIOTIFF: Creating module. -- ITKIOTIFF: Creating itkTIFFImageIO submodule. -- ITKIOVTK: Creating module. -- ITKIOVTK: Creating itkVTKImageIO submodule. -- ITKTestKernel: Creating module. -- ITKTestKernel: Creating itkComparisonImageFilter submodule. -- ITKTestKernel: Creating itkPipelineMonitorImageFilter submodule. -- ITKTestKernel: Creating itkRandomImageSource submodule. -- ITKLabelMap: Creating module. -- ITKLabelMap: Creating itkLabelObjectLine submodule. -- ITKLabelMap: Creating itkLabelObject submodule. -- ITKLabelMap: Creating itkShapeLabelObject submodule. -- ITKLabelMap: Creating itkStatisticsLabelObject submodule. -- ITKLabelMap: Creating ITKLabelMapBase submodule. -- ITKLabelMap: Creating itkLabelMapFilter submodule. -- ITKLabelMap: Creating itkInPlaceLabelMapFilter submodule. -- ITKLabelMap: Creating itkChangeRegionLabelMapFilter submodule. -- ITKLabelMap: Creating itkAggregateLabelMapFilter submodule. -- ITKLabelMap: Creating itkAutoCropLabelMapFilter submodule. -- ITKLabelMap: Creating itkBinaryFillholeImageFilter submodule. -- ITKLabelMap: Creating itkBinaryGrindPeakImageFilter submodule. -- ITKLabelMap: Creating itkBinaryImageToLabelMapFilter submodule. -- ITKLabelMap: Creating itkBinaryImageToShapeLabelMapFilter submodule. -- ITKLabelMap: Creating itkBinaryImageToStatisticsLabelMapFilter submodule. -- ITKLabelMap: Creating itkBinaryNotImageFilter submodule. -- ITKLabelMap: Creating itkBinaryReconstructionByDilationImageFilter submodule. -- ITKLabelMap: Creating itkBinaryReconstructionByErosionImageFilter submodule. -- ITKLabelMap: Creating itkBinaryShapeKeepNObjectsImageFilter submodule. -- ITKLabelMap: Creating itkBinaryShapeOpeningImageFilter submodule. -- ITKLabelMap: Creating itkBinaryStatisticsKeepNObjectsImageFilter submodule. -- ITKLabelMap: Creating itkBinaryStatisticsOpeningImageFilter submodule. -- ITKLabelMap: Creating itkChangeLabelLabelMapFilter submodule. -- ITKLabelMap: Creating itkCropLabelMapFilter submodule. -- ITKLabelMap: Creating itkLabelImageToLabelMapFilter submodule. -- ITKLabelMap: Creating itkLabelImageToShapeLabelMapFilter submodule. -- ITKLabelMap: Creating itkLabelImageToStatisticsLabelMapFilter submodule. -- ITKLabelMap: Creating itkLabelMapMaskImageFilter submodule. -- ITKLabelMap: Creating itkLabelMapToBinaryImageFilter submodule. -- ITKLabelMap: Creating itkLabelMapToLabelImageFilter submodule. -- ITKLabelMap: Creating itkLabelSelectionLabelMapFilter submodule. -- ITKLabelMap: Creating itkLabelShapeKeepNObjectsImageFilter submodule. -- ITKLabelMap: Creating itkLabelShapeOpeningImageFilter submodule. -- ITKLabelMap: Creating itkLabelStatisticsKeepNObjectsImageFilter submodule. -- ITKLabelMap: Creating itkLabelStatisticsOpeningImageFilter submodule. -- ITKLabelMap: Creating itkLabelUniqueLabelMapFilter submodule. -- ITKLabelMap: Creating itkMergeLabelMapFilter submodule. -- ITKLabelMap: Creating itkObjectByObjectLabelMapFilter submodule. -- ITKLabelMap: Creating itkPadLabelMapFilter submodule. -- ITKLabelMap: Creating itkRegionFromReferenceLabelMapFilter submodule. -- ITKLabelMap: Creating itkRelabelLabelMapFilter submodule. -- ITKLabelMap: Creating itkShapeKeepNObjectsLabelMapFilter submodule. -- ITKLabelMap: Creating itkShapeLabelMapFilter submodule. -- ITKLabelMap: Creating itkShapeOpeningLabelMapFilter submodule. -- ITKLabelMap: Creating itkShapePositionLabelMapFilter submodule. -- ITKLabelMap: Creating itkShapeRelabelImageFilter submodule. -- ITKLabelMap: Creating itkShapeRelabelLabelMapFilter submodule. -- ITKLabelMap: Creating itkShapeUniqueLabelMapFilter submodule. -- ITKLabelMap: Creating itkShiftScaleLabelMapFilter submodule. -- ITKLabelMap: Creating itkStatisticsKeepNObjectsLabelMapFilter submodule. -- ITKLabelMap: Creating itkStatisticsLabelMapFilter submodule. -- ITKLabelMap: Creating itkStatisticsOpeningLabelMapFilter submodule. -- ITKLabelMap: Creating itkStatisticsPositionLabelMapFilter submodule. -- ITKLabelMap: Creating itkStatisticsRelabelImageFilter submodule. -- ITKLabelMap: Creating itkStatisticsRelabelLabelMapFilter submodule. -- ITKLabelMap: Creating itkStatisticsUniqueLabelMapFilter submodule. -- ITKImageCompose: Creating module. -- ITKImageCompose: Creating itkComposeImageFilter submodule. -- ITKImageCompose: Creating itkJoinSeriesImageFilter submodule. -- ITKMesh: Creating module. -- ITKMesh: Creating itkMeshBase submodule. -- ITKMesh: Creating itkMeshSource submodule. -- ITKMesh: Creating itkImageToMeshFilter submodule. -- ITKMesh: Creating itkMeshToMeshFilter submodule. -- ITKMesh: Creating itkBinaryMask3DMeshSource submodule. -- ITKSpatialObjects: Creating module. -- ITKSpatialObjects: Creating itkSpatialObjectProperty submodule. -- ITKSpatialObjects: Creating itkAffineGeometryFrame submodule. -- ITKSpatialObjects: Creating itkSpatialObjectBase submodule. -- ITKSpatialObjects: Creating itkSpatialObjectPoint submodule. -- ITKSpatialObjects: Creating itkContourSpatialObjectPoint submodule. -- ITKSpatialObjects: Creating itkDTITubeSpatialObjectPoint submodule. -- ITKSpatialObjects: Creating itkVesselTubeSpatialObjectPoint submodule. -- ITKSpatialObjects: Creating itkPointBasedSpatialObject submodule. -- ITKSpatialObjects: Creating itkImageSpatialObject submodule. -- ITKSpatialObjects: Creating itkBlobSpatialObject submodule. -- ITKSpatialObjects: Creating itkPolygonSpatialObject submodule. -- ITKSpatialObjects: Creating itkArrowSpatialObject submodule. -- ITKSpatialObjects: Creating itkBoxSpatialObject submodule. -- ITKSpatialObjects: Creating itkContourSpatialObject submodule. -- ITKSpatialObjects: Creating itkDTITubeSpatialObject submodule. -- ITKSpatialObjects: Creating itkEllipseSpatialObject submodule. -- ITKSpatialObjects: Creating itkGaussianSpatialObject submodule. -- ITKSpatialObjects: Creating itkGroupSpatialObject submodule. -- ITKSpatialObjects: Creating itkImageMaskSpatialObject submodule. -- ITKSpatialObjects: Creating itkLandmarkSpatialObject submodule. -- ITKSpatialObjects: Creating itkLineSpatialObject submodule. -- ITKSpatialObjects: Creating itkLineSpatialObjectPoint submodule. -- ITKSpatialObjects: Creating itkMetaConverterBase submodule. -- ITKSpatialObjects: Creating itkPlaneSpatialObject submodule. -- ITKSpatialObjects: Creating itkPolygonGroupSpatialObject submodule. -- ITKSpatialObjects: Creating itkSceneSpatialObject submodule. -- ITKSpatialObjects: Creating itkSpatialObjectToImageFilter submodule. -- ITKSpatialObjects: Creating itkSurfaceSpatialObject submodule. -- ITKSpatialObjects: Creating itkSurfaceSpatialObjectPoint submodule. -- ITKSpatialObjects: Creating itkTubeSpatialObjectPoint submodule. -- ITKSpatialObjects: Creating itkVesselTubeSpatialObject submodule. -- ITKImageStatistics: Creating module. -- ITKImageStatistics: Creating itkAccumulateImageFilter submodule. -- ITKImageStatistics: Creating itkAdaptiveHistogramEqualizationImageFilter submodule. -- ITKImageStatistics: Creating itkBinaryProjectionImageFilter submodule. -- ITKImageStatistics: Creating itkImageMomentsCalculator submodule. -- ITKImageStatistics: Creating itkImagePCAShapeModelEstimator submodule. -- ITKImageStatistics: Creating itkImageShapeModelEstimatorBase submodule. -- ITKImageStatistics: Creating itkLabelStatisticsImageFilter submodule. -- ITKImageStatistics: Creating itkMaximumProjectionImageFilter submodule. -- ITKImageStatistics: Creating itkMeanProjectionImageFilter submodule. -- ITKImageStatistics: Creating itkMedianProjectionImageFilter submodule. -- ITKImageStatistics: Creating itkMinimumMaximumImageFilter submodule. -- ITKImageStatistics: Creating itkMinimumProjectionImageFilter submodule. -- ITKImageStatistics: Creating itkStandardDeviationProjectionImageFilter submodule. -- ITKImageStatistics: Creating itkStatisticsImageFilter submodule. -- ITKImageStatistics: Creating itkSumProjectionImageFilter submodule. -- ITKPath: Creating module. -- ITKPath: Creating itkPathBase submodule. -- ITKPath: Creating itkPolyLineParametricPath submodule. -- ITKPath: Creating itkPathToImageFilter submodule. -- ITKPath: Creating itkParametricPath submodule. -- ITKPath: Creating itkImageToPathFilter submodule. -- ITKPath: Creating itkPathSource submodule. -- ITKImageIntensity: Creating module. -- ITKImageIntensity: Creating itkAbsImageFilter submodule. -- ITKImageIntensity: Creating itkAcosImageFilter submodule. -- ITKImageIntensity: Creating itkAddImageFilter submodule. -- ITKImageIntensity: Creating itkAndImageFilter submodule. -- ITKImageIntensity: Creating itkAsinImageFilter submodule. -- ITKImageIntensity: Creating itkAtan2ImageFilter submodule. -- ITKImageIntensity: Creating itkAtanImageFilter submodule. -- ITKImageIntensity: Creating itkBinaryMagnitudeImageFilter submodule. -- ITKImageIntensity: Creating itkBoundedReciprocalImageFilter submodule. -- ITKImageIntensity: Creating itkClampImageFilter submodule. -- ITKImageIntensity: Creating itkComplexToImaginaryImageFilter submodule. -- ITKImageIntensity: Creating itkComplexToModulusImageFilter submodule. -- ITKImageIntensity: Creating itkComplexToPhaseImageFilter submodule. -- ITKImageIntensity: Creating itkComplexToRealImageFilter submodule. -- ITKImageIntensity: Creating itkConstrainedValueAdditionImageFilter submodule. -- ITKImageIntensity: Creating itkConstrainedValueDifferenceImageFilter submodule. -- ITKImageIntensity: Creating itkCosImageFilter submodule. -- ITKImageIntensity: Creating itkDivideImageFilter submodule. -- ITKImageIntensity: Creating itkEdgePotentialImageFilter submodule. -- ITKImageIntensity: Creating itkExpImageFilter submodule. -- ITKImageIntensity: Creating itkExpNegativeImageFilter submodule. -- ITKImageIntensity: Creating itkHistogramMatchingImageFilter submodule. -- ITKImageIntensity: Creating itkIntensityWindowingImageFilter submodule. -- ITKImageIntensity: Creating itkInvertIntensityImageFilter submodule. -- ITKImageIntensity: Creating itkLog10ImageFilter submodule. -- ITKImageIntensity: Creating itkLogImageFilter submodule. -- ITKImageIntensity: Creating itkMagnitudeAndPhaseToComplexImageFilter submodule. -- ITKImageIntensity: Creating itkMaskImageFilter submodule. -- ITKImageIntensity: Creating itkMaskNegatedImageFilter submodule. -- ITKImageIntensity: Creating itkMaximumImageFilter submodule. -- ITKImageIntensity: Creating itkMinimumImageFilter submodule. -- ITKImageIntensity: Creating itkModulusImageFilter submodule. -- ITKImageIntensity: Creating itkMultiplyImageFilter submodule. -- ITKImageIntensity: Creating itkNaryAddImageFilter submodule. -- ITKImageIntensity: Creating itkNaryMaximumImageFilter submodule. -- ITKImageIntensity: Creating itkNormalizeImageFilter submodule. -- ITKImageIntensity: Creating itkNormalizeToConstantImageFilter submodule. -- ITKImageIntensity: Creating itkNotImageFilter submodule. -- ITKImageIntensity: Creating itkOrImageFilter submodule. -- ITKImageIntensity: Creating itkPowImageFilter submodule. -- ITKImageIntensity: Creating itkRGBToLuminanceImageFilter submodule. -- ITKImageIntensity: Creating itkRescaleIntensityImageFilter submodule. -- ITKImageIntensity: Creating itkRoundImageFilter submodule. -- ITKImageIntensity: Creating itkShiftScaleImageFilter submodule. -- ITKImageIntensity: Creating itkSigmoidImageFilter submodule. -- ITKImageIntensity: Creating itkSinImageFilter submodule. -- ITKImageIntensity: Creating itkSqrtImageFilter submodule. -- ITKImageIntensity: Creating itkSquareImageFilter submodule. -- ITKImageIntensity: Creating itkSubtractImageFilter submodule. -- ITKImageIntensity: Creating itkTanImageFilter submodule. -- ITKImageIntensity: Creating itkTernaryAddImageFilter submodule. -- ITKImageIntensity: Creating itkTernaryMagnitudeImageFilter submodule. -- ITKImageIntensity: Creating itkTernaryMagnitudeSquaredImageFilter submodule. -- ITKImageIntensity: Creating itkVectorExpandImageFilter submodule. -- ITKImageIntensity: Creating itkVectorIndexSelectionCastImageFilter submodule. -- ITKImageIntensity: Creating itkVectorMagnitudeImageFilter submodule. -- ITKImageIntensity: Creating itkVectorRescaleIntensityImageFilter submodule. -- ITKImageIntensity: Creating itkWeightedAddImageFilter submodule. -- ITKImageIntensity: Creating itkXorImageFilter submodule. -- ITKThresholding: Creating module. -- ITKThresholding: Creating itkHistogramThresholdCalculator submodule. -- ITKThresholding: Creating itkHistogramThresholdImageFilter submodule. -- ITKThresholding: Creating itkBinaryThresholdImageFilter submodule. -- ITKThresholding: Creating itkBinaryThresholdProjectionImageFilter submodule. -- ITKThresholding: Creating itkHuangThresholdCalculator submodule. -- ITKThresholding: Creating itkHuangThresholdImageFilter submodule. -- ITKThresholding: Creating itkIntermodesThresholdCalculator submodule. -- ITKThresholding: Creating itkIntermodesThresholdImageFilter submodule. -- ITKThresholding: Creating itkIsoDataThresholdCalculator submodule. -- ITKThresholding: Creating itkIsoDataThresholdImageFilter submodule. -- ITKThresholding: Creating itkKappaSigmaThresholdImageFilter submodule. -- ITKThresholding: Creating itkKittlerIllingworthThresholdCalculator submodule. -- ITKThresholding: Creating itkKittlerIllingworthThresholdImageFilter submodule. -- ITKThresholding: Creating itkLiThresholdCalculator submodule. -- ITKThresholding: Creating itkLiThresholdImageFilter submodule. -- ITKThresholding: Creating itkMaximumEntropyThresholdCalculator submodule. -- ITKThresholding: Creating itkMaximumEntropyThresholdImageFilter submodule. -- ITKThresholding: Creating itkMomentsThresholdCalculator submodule. -- ITKThresholding: Creating itkMomentsThresholdImageFilter submodule. -- ITKThresholding: Creating itkOtsuMultipleThresholdsImageFilter submodule. -- ITKThresholding: Creating itkOtsuThresholdCalculator submodule. -- ITKThresholding: Creating itkOtsuThresholdImageFilter submodule. -- ITKThresholding: Creating itkRenyiEntropyThresholdCalculator submodule. -- ITKThresholding: Creating itkRenyiEntropyThresholdImageFilter submodule. -- ITKThresholding: Creating itkShanbhagThresholdCalculator submodule. -- ITKThresholding: Creating itkShanbhagThresholdImageFilter submodule. -- ITKThresholding: Creating itkThresholdImageFilter submodule. -- ITKThresholding: Creating itkThresholdLabelerImageFilter submodule. -- ITKThresholding: Creating itkTriangleThresholdCalculator submodule. -- ITKThresholding: Creating itkTriangleThresholdImageFilter submodule. -- ITKThresholding: Creating itkYenThresholdCalculator submodule. -- ITKThresholding: Creating itkYenThresholdImageFilter submodule. -- ITKConnectedComponents: Creating module. -- ITKConnectedComponents: Creating itkConnectedComponentImageFilter submodule. -- ITKConnectedComponents: Creating itkHardConnectedComponentImageFilter submodule. -- ITKConnectedComponents: Creating itkRelabelComponentImageFilter submodule. -- ITKConnectedComponents: Creating itkScalarConnectedComponentImageFilter submodule. -- ITKConnectedComponents: Creating itkThresholdMaximumConnectedComponentsImageFilter submodule. -- ITKConnectedComponents: Creating itkVectorConnectedComponentImageFilter submodule. -- ITKMathematicalMorphology: Creating module. -- ITKMathematicalMorphology: Creating itkFlatStructuringElement submodule. -- ITKMathematicalMorphology: Creating itkBlackTopHatImageFilter submodule. -- ITKMathematicalMorphology: Creating itkClosingByReconstructionImageFilter submodule. -- ITKMathematicalMorphology: Creating itkDoubleThresholdImageFilter submodule. -- ITKMathematicalMorphology: Creating itkGrayscaleConnectedClosingImageFilter submodule. -- ITKMathematicalMorphology: Creating itkGrayscaleConnectedOpeningImageFilter submodule. -- ITKMathematicalMorphology: Creating itkGrayscaleDilateImageFilter submodule. -- ITKMathematicalMorphology: Creating itkGrayscaleErodeImageFilter submodule. -- ITKMathematicalMorphology: Creating itkGrayscaleFillholeImageFilter submodule. -- ITKMathematicalMorphology: Creating itkGrayscaleFunctionDilateImageFilter submodule. -- ITKMathematicalMorphology: Creating itkGrayscaleFunctionErodeImageFilter submodule. -- ITKMathematicalMorphology: Creating itkGrayscaleGeodesicDilateImageFilter submodule. -- ITKMathematicalMorphology: Creating itkGrayscaleGeodesicErodeImageFilter submodule. -- ITKMathematicalMorphology: Creating itkGrayscaleGrindPeakImageFilter submodule. -- ITKMathematicalMorphology: Creating itkGrayscaleMorphologicalClosingImageFilter submodule. -- ITKMathematicalMorphology: Creating itkGrayscaleMorphologicalOpeningImageFilter submodule. -- ITKMathematicalMorphology: Creating itkHConcaveImageFilter submodule. -- ITKMathematicalMorphology: Creating itkHConvexImageFilter submodule. -- ITKMathematicalMorphology: Creating itkHMaximaImageFilter submodule. -- ITKMathematicalMorphology: Creating itkHMinimaImageFilter submodule. -- ITKMathematicalMorphology: Creating itkMorphologicalGradientImageFilter submodule. -- ITKMathematicalMorphology: Creating itkOpeningByReconstructionImageFilter submodule. -- ITKMathematicalMorphology: Creating itkReconstructionByDilationImageFilter submodule. -- ITKMathematicalMorphology: Creating itkReconstructionByErosionImageFilter submodule. -- ITKMathematicalMorphology: Creating itkRegionalMaximaImageFilter submodule. -- ITKMathematicalMorphology: Creating itkRegionalMinimaImageFilter submodule. -- ITKMathematicalMorphology: Creating itkValuedRegionalMaximaImageFilter submodule. -- ITKMathematicalMorphology: Creating itkValuedRegionalMinimaImageFilter submodule. -- ITKMathematicalMorphology: Creating itkWhiteTopHatImageFilter submodule. -- ITKBinaryMathematicalMorphology: Creating module. -- ITKBinaryMathematicalMorphology: Creating itkBinaryClosingByReconstructionImageFilter submodule. -- ITKBinaryMathematicalMorphology: Creating itkBinaryDilateImageFilter submodule. -- ITKBinaryMathematicalMorphology: Creating itkBinaryErodeImageFilter submodule. -- ITKBinaryMathematicalMorphology: Creating itkBinaryMorphologicalClosingImageFilter submodule. -- ITKBinaryMathematicalMorphology: Creating itkBinaryMorphologicalOpeningImageFilter submodule. -- ITKBinaryMathematicalMorphology: Creating itkBinaryOpeningByReconstructionImageFilter submodule. -- ITKBinaryMathematicalMorphology: Creating itkBinaryPruningImageFilter submodule. -- ITKBinaryMathematicalMorphology: Creating itkBinaryThinningImageFilter submodule. -- ITKBinaryMathematicalMorphology: Creating itkDilateObjectMorphologyImageFilter submodule. -- ITKBinaryMathematicalMorphology: Creating itkErodeObjectMorphologyImageFilter submodule. -- ITKImageLabel: Creating module. -- ITKImageLabel: Creating itkBinaryContourImageFilter submodule. -- ITKImageLabel: Creating itkChangeLabelImageFilter submodule. -- ITKImageLabel: Creating itkLabelContourImageFilter submodule. -- ITKNarrowBand: Creating module. -- ITKNarrowBand: Creating ITKNarrowBandBase submodule. -- ITKNarrowBand: Creating itkNarrowBandImageFilterBase submodule. -- ITKDistanceMap: Creating module. -- ITKDistanceMap: Creating itkApproximateSignedDistanceMapImageFilter submodule. -- ITKDistanceMap: Creating itkContourDirectedMeanDistanceImageFilter submodule. -- ITKDistanceMap: Creating itkContourMeanDistanceImageFilter submodule. -- ITKDistanceMap: Creating itkDanielssonDistanceMapImageFilter submodule. -- ITKDistanceMap: Creating itkDirectedHausdorffDistanceImageFilter submodule. -- ITKDistanceMap: Creating itkFastChamferDistanceImageFilter submodule. -- ITKDistanceMap: Creating itkHausdorffDistanceImageFilter submodule. -- ITKDistanceMap: Creating itkIsoContourDistanceImageFilter submodule. -- ITKDistanceMap: Creating itkSignedDanielssonDistanceMapImageFilter submodule. -- ITKDistanceMap: Creating itkSignedMaurerDistanceMapImageFilter submodule. -- ITKQuadEdgeMesh: Creating module. -- ITKQuadEdgeMesh: Creating itkQuadEdge submodule. -- ITKQuadEdgeMesh: Creating itkGeometricalQuadEdge submodule. -- ITKQuadEdgeMesh: Creating itkQuadEdgeMeshPoint submodule. -- ITKQuadEdgeMesh: Creating itkQuadEdgeMeshTraits submodule. -- ITKQuadEdgeMesh: Creating itkQuadEdgeCellTraitsInfo submodule. -- ITKQuadEdgeMesh: Creating itkQuadEdgeMeshLineCell submodule. -- ITKQuadEdgeMesh: Creating itkQuadEdgeMeshBase submodule. -- ITKQuadEdgeMesh: Creating itkQuadEdgeMeshToQuadEdgeMeshFilter submodule. -- ITKFastMarching: Creating module. -- ITKFastMarching: Creating itkLevelSetNode submodule. -- ITKFastMarching: Creating itkNodePair submodule. -- ITKFastMarching: Creating itkFastMarchingStoppingCriterionBase submodule. -- ITKFastMarching: Creating ITKFastMarchingBase submodule. -- ITKFastMarching: Creating itkFastMarchingImageFilterBase submodule. -- ITKFastMarching: Creating itkFastMarchingExtensionImageFilter submodule. -- ITKFastMarching: Creating itkFastMarchingImageFilter submodule. -- ITKFastMarching: Creating itkFastMarchingImageToNodePairContainerAdaptor submodule. -- ITKFastMarching: Creating itkFastMarchingReachedTargetNodesStoppingCriterion submodule. -- ITKFastMarching: Creating itkFastMarchingThresholdStoppingCriterion submodule. -- ITKFastMarching: Creating itkFastMarchingUpwindGradientImageFilter submodule. -- ITKFastMarching: Creating itkFastMarchingUpwindGradientImageFilterBase submodule. -- ITKImageCompare: Creating module. -- ITKImageCompare: Creating itkAbsoluteValueDifferenceImageFilter submodule. -- ITKImageCompare: Creating itkCheckerBoardImageFilter submodule. -- ITKImageCompare: Creating itkSTAPLEImageFilter submodule. -- ITKImageCompare: Creating itkSimilarityIndexImageFilter submodule. -- ITKImageCompare: Creating itkSquaredDifferenceImageFilter submodule. -- ITKSmoothing: Creating module. -- ITKSmoothing: Creating itkBinomialBlurImageFilter submodule. -- ITKSmoothing: Creating itkDiscreteGaussianImageFilter submodule. -- ITKSmoothing: Creating itkMeanImageFilter submodule. -- ITKSmoothing: Creating itkMedianImageFilter submodule. -- ITKSmoothing: Creating itkRecursiveGaussianImageFilter submodule. -- ITKSmoothing: Creating itkSmoothingRecursiveGaussianImageFilter submodule. -- ITKImageGradient: Creating module. -- ITKImageGradient: Creating itkDifferenceOfGaussiansGradientImageFilter submodule. -- ITKImageGradient: Creating itkGradientImageFilter submodule. -- ITKImageGradient: Creating itkGradientMagnitudeImageFilter submodule. -- ITKImageGradient: Creating itkGradientMagnitudeRecursiveGaussianImageFilter submodule. -- ITKImageGradient: Creating itkGradientRecursiveGaussianImageFilter submodule. -- ITKImageGradient: Creating itkVectorGradientMagnitudeImageFilter submodule. -- ITKImageSources: Creating module. -- ITKImageSources: Creating itkGaborImageSource submodule. -- ITKImageSources: Creating itkGaussianImageSource submodule. -- ITKImageSources: Creating itkGenerateImageSource submodule. -- ITKImageSources: Creating itkGridImageSource submodule. -- ITKImageSources: Creating itkParametricImageSource submodule. -- ITKImageSources: Creating itkPhysicalPointImageSource submodule. -- ITKImageFeature: Creating module. -- ITKImageFeature: Creating itkHessianRecursiveGaussianImageFilter submodule. -- ITKImageFeature: Creating itkBilateralImageFilter submodule. -- ITKImageFeature: Creating itkCannyEdgeDetectionImageFilter submodule. -- ITKImageFeature: Creating itkDerivativeImageFilter submodule. -- ITKImageFeature: Creating itkGradientVectorFlowImageFilter submodule. -- ITKImageFeature: Creating itkHessian3DToVesselnessMeasureImageFilter submodule. -- ITKImageFeature: Creating itkHessianToObjectnessMeasureImageFilter submodule. -- ITKImageFeature: Creating itkHoughTransform2DCirclesImageFilter submodule. -- ITKImageFeature: Creating itkHoughTransform2DLinesImageFilter submodule. -- ITKImageFeature: Creating itkLaplacianImageFilter submodule. -- ITKImageFeature: Creating itkLaplacianRecursiveGaussianImageFilter submodule. -- ITKImageFeature: Creating itkLaplacianSharpeningImageFilter submodule. -- ITKImageFeature: Creating itkMaskFeaturePointSelectionFilter submodule. -- ITKImageFeature: Creating itkSimpleContourExtractorImageFilter submodule. -- ITKImageFeature: Creating itkSobelEdgeDetectionImageFilter submodule. -- ITKImageFeature: Creating itkUnsharpMaskImageFilter submodule. -- ITKImageFeature: Creating itkZeroCrossingBasedEdgeDetectionImageFilter submodule. -- ITKImageFeature: Creating itkZeroCrossingImageFilter submodule. -- ITKOptimizers: Creating module. -- ITKOptimizers: Creating ITKCostFunctions submodule. -- ITKOptimizers: Creating ITKOptimizersBase submodule. -- ITKOptimizers: Creating itkCostFunction submodule. -- ITKLevelSets: Creating module. -- ITKLevelSets: Creating itkLevelSetFunction submodule. -- ITKLevelSets: Creating itkSparseFieldLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkSparseFieldFourthOrderLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkSegmentationLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkShapePriorSegmentationLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkAnisotropicFourthOrderLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkCannySegmentationLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkCollidingFrontsImageFilter submodule. -- ITKLevelSets: Creating itkCurvesLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkGeodesicActiveContourLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkGeodesicActiveContourShapePriorLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkIsotropicFourthOrderLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkLaplacianSegmentationLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkNarrowBandCurvesLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkNarrowBandLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkNarrowBandThresholdSegmentationLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkParallelSparseFieldLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkReinitializeLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkSegmentationLevelSetFunction submodule. -- ITKLevelSets: Creating itkShapeDetectionLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkShapePriorMAPCostFunction submodule. -- ITKLevelSets: Creating itkShapePriorMAPCostFunctionBase submodule. -- ITKLevelSets: Creating itkThresholdSegmentationLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkUnsharpMaskLevelSetImageFilter submodule. -- ITKLevelSets: Creating itkVectorThresholdSegmentationLevelSetImageFilter submodule. -- ITKAntiAlias: Creating module. -- ITKAntiAlias: Creating itkAntiAliasBinaryImageFilter submodule. -- ITKBiasCorrection: Creating module. -- ITKBiasCorrection: Creating itkN4BiasFieldCorrectionImageFilter submodule. -- ITKClassifiers: Creating module. -- ITKClassifiers: Creating itkBayesianClassifierImageFilter submodule. -- ITKClassifiers: Creating itkBayesianClassifierInitializationImageFilter submodule. -- ITKClassifiers: Creating itkScalarImageKmeansImageFilter submodule. -- ITKColormap: Creating module. -- ITKColormap: Creating itkColormapFunction submodule. -- ITKColormap: Creating itkCustomColormapFunction submodule. -- ITKColormap: Creating itkScalarToRGBColormapImageFilter submodule. -- ITKFFT: Creating module. -- ITKFFT: Creating itkComplexToComplexFFTImageFilter submodule. -- ITKFFT: Creating itkFFTPadImageFilter submodule. -- ITKFFT: Creating itkFFTShiftImageFilter submodule. -- ITKFFT: Creating itkFFTWComplexToComplexFFTImageFilter submodule. -- ITKFFT: Creating itkFFTWForwardFFTImageFilter submodule. -- ITKFFT: Creating itkFFTWGlobalConfiguration submodule. -- ITKFFT: Creating itkFFTWHalfHermitianToRealInverseFFTImageFilter submodule. -- ITKFFT: Creating itkFFTWInverseFFTImageFilter submodule. -- ITKFFT: Creating itkFFTWRealToHalfHermitianForwardFFTImageFilter submodule. -- ITKFFT: Creating itkForwardFFTImageFilter submodule. -- ITKFFT: Creating itkFullToHalfHermitianImageFilter submodule. -- ITKFFT: Creating itkHalfHermitianToRealInverseFFTImageFilter submodule. -- ITKFFT: Creating itkHalfToFullHermitianImageFilter submodule. -- ITKFFT: Creating itkInverseFFTImageFilter submodule. -- ITKFFT: Creating itkRealToHalfHermitianForwardFFTImageFilter submodule. -- ITKFFT: Creating itkVnlComplexToComplexFFTImageFilter submodule. -- ITKFFT: Creating itkVnlForwardFFTImageFilter submodule. -- ITKFFT: Creating itkVnlHalfHermitianToRealInverseFFTImageFilter submodule. -- ITKFFT: Creating itkVnlInverseFFTImageFilter submodule. -- ITKFFT: Creating itkVnlRealToHalfHermitianForwardFFTImageFilter submodule. -- ITKConvolution: Creating module. -- ITKConvolution: Creating itkConvolutionImageFilterBase submodule. -- ITKConvolution: Creating itkConvolutionImageFilter submodule. -- ITKConvolution: Creating itkFFTConvolutionImageFilter submodule. -- ITKConvolution: Creating itkFFTNormalizedCorrelationImageFilter submodule. -- ITKConvolution: Creating itkMaskedFFTNormalizedCorrelationImageFilter submodule. -- ITKDeconvolution: Creating module. -- ITKDeconvolution: Creating itkIterativeDeconvolutionImageFilter submodule. -- ITKDeconvolution: Creating itkInverseDeconvolutionImageFilter submodule. -- ITKDeconvolution: Creating itkLandweberDeconvolutionImageFilter submodule. -- ITKDeconvolution: Creating itkProjectedLandweberDeconvolutionImageFilter submodule. -- ITKDeconvolution: Creating itkRichardsonLucyDeconvolutionImageFilter submodule. -- ITKDeconvolution: Creating itkTikhonovDeconvolutionImageFilter submodule. -- ITKDeconvolution: Creating itkWienerDeconvolutionImageFilter submodule. -- ITKDisplacementField: Creating module. -- ITKDisplacementField: Creating itkTimeVaryingVelocityFieldTransform submodule. -- ITKDisplacementField: Creating itkBSplineExponentialDiffeomorphicTransform submodule. -- ITKDisplacementField: Creating itkBSplineSmoothingOnUpdateDisplacementFieldTransform submodule. -- ITKDisplacementField: Creating itkConstantVelocityFieldTransform submodule. -- ITKDisplacementField: Creating itkDisplacementFieldJacobianDeterminantFilter submodule. -- ITKDisplacementField: Creating itkDisplacementFieldTransform submodule. -- ITKDisplacementField: Creating itkGaussianExponentialDiffeomorphicTransform submodule. -- ITKDisplacementField: Creating itkGaussianSmoothingOnUpdateDisplacementFieldTransform submodule. -- ITKDisplacementField: Creating itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform submodule. -- ITKDisplacementField: Creating itkVelocityFieldTransform submodule. -- ITKIOBioRad: Creating module. -- ITKIOBioRad: Creating itkBioRadImageIO submodule. -- ITKIOLSM: Creating module. -- ITKIOLSM: Creating itkLSMImageIO submodule. -- ITKIOStimulate: Creating module. -- ITKIOStimulate: Creating itkStimulateImageIO submodule. -- ITKRegistrationCommon: Creating module. -- ITKRegistrationCommon: Creating itkBlockMatchingImageFilter submodule. -- ITKRegistrationCommon: Creating itkCenteredTransformInitializer submodule. -- ITKRegistrationCommon: Creating itkCenteredVersorTransformInitializer submodule. -- ITKRegistrationCommon: Creating itkImageRegistrationMethod submodule. -- ITKRegistrationCommon: Creating itkImageToImageMetric submodule. -- ITKRegistrationCommon: Creating itkLandmarkBasedTransformInitializer submodule. -- ITKRegistrationCommon: Creating itkMattesMutualInformationImageToImageMetric submodule. -- ITKRegistrationCommon: Creating itkMeanReciprocalSquareDifferenceImageToImageMetric submodule. -- ITKRegistrationCommon: Creating itkMeanSquaresImageToImageMetric submodule. -- ITKRegistrationCommon: Creating itkMultiResolutionImageRegistrationMethod submodule. -- ITKRegistrationCommon: Creating itkMultiResolutionPyramidImageFilter submodule. -- ITKRegistrationCommon: Creating itkMutualInformationImageToImageMetric submodule. -- ITKRegistrationCommon: Creating itkNormalizedCorrelationImageToImageMetric submodule. -- ITKRegistrationCommon: Creating itkPDEDeformableRegistrationFunction submodule. -- ITKRegistrationCommon: Creating itkRecursiveMultiResolutionPyramidImageFilter submodule. -- ITKRegistrationCommon: Creating itkTransformParametersAdaptorBase submodule. -- ITKEigen: Creating module. -- ITKEigen: Creating itkEigenAnalysis2DImageFilter submodule. -- ITKIOSpatialObjects: Creating module. -- ITKIOSpatialObjects: Creating itkSpatialObjectReader submodule. -- ITKIOSpatialObjects: Creating itkSpatialObjectWriter submodule. -- ITKPDEDeformableRegistration: Creating module. -- ITKPDEDeformableRegistration: Creating itkDemonsRegistrationFilter submodule. -- ITKPDEDeformableRegistration: Creating itkLevelSetMotionRegistrationFilter submodule. -- ITKPDEDeformableRegistration: Creating itkPDEDeformableRegistrationFilter submodule. -- ITKPDEDeformableRegistration: Creating itkSymmetricForcesDemonsRegistrationFilter submodule. -- ITKIOIPL: Creating module. -- ITKIOIPL: Creating itkIPLCommonImageIO submodule. -- ITKIOGE: Creating module. -- ITKIOGE: Creating itkGE4ImageIO submodule. -- ITKIOGE: Creating itkGE5ImageIO submodule. -- ITKIOGE: Creating itkGEAdwImageIO submodule. -- ITKIOSiemens: Creating module. -- ITKIOSiemens: Creating itkSiemensVisionImageIO submodule. -- ITKIOHDF5: Creating module. -- ITKIOHDF5: Creating itkHDF5ImageIO submodule. -- ITKIOMRC: Creating module. -- ITKIOMRC: Creating itkMRCImageIO submodule. -- ITKIORAW: Creating module. -- ITKIORAW: Creating itkRawImageIO submodule. -- ITKIOTransformBase: Creating module. -- ITKIOTransformBase: Creating itkTransformFileReader submodule. -- ITKIOTransformBase: Creating itkTransformFileWriter submodule. -- ITKIOTransformBase: Creating itkTransformIOBaseTemplate submodule. -- ITKImageFusion: Creating module. -- ITKImageFusion: Creating itkLabelMapContourOverlayImageFilter submodule. -- ITKImageFusion: Creating itkLabelMapOverlayImageFilter submodule. -- ITKImageFusion: Creating itkLabelMapToRGBImageFilter submodule. -- ITKImageFusion: Creating itkLabelOverlayImageFilter submodule. -- ITKImageFusion: Creating itkLabelToRGBImageFilter submodule. -- ITKImageNoise: Creating module. -- ITKImageNoise: Creating itkAdditiveGaussianNoiseImageFilter submodule. -- ITKImageNoise: Creating itkNoiseBaseImageFilter submodule. -- ITKImageNoise: Creating itkSaltAndPepperNoiseImageFilter submodule. -- ITKImageNoise: Creating itkShotNoiseImageFilter submodule. -- ITKImageNoise: Creating itkSpeckleNoiseImageFilter submodule. -- ITKLabelVoting: Creating module. -- ITKLabelVoting: Creating itkVotingBinaryImageFilter submodule. -- ITKLabelVoting: Creating itkBinaryMedianImageFilter submodule. -- ITKLabelVoting: Creating itkLabelVotingImageFilter submodule. -- ITKLabelVoting: Creating itkVotingBinaryHoleFillingImageFilter submodule. -- ITKLabelVoting: Creating itkVotingBinaryIterativeHoleFillingImageFilter submodule. -- ITKQuadEdgeMeshFiltering: Creating module. -- ITKQuadEdgeMeshFiltering: Creating itkBorderQuadEdgeMeshFilter submodule. -- ITKQuadEdgeMeshFiltering: Creating itkCleanQuadEdgeMeshFilter submodule. -- ITKQuadEdgeMeshFiltering: Creating itkDelaunayConformingQuadEdgeMeshFilter submodule. -- ITKQuadEdgeMeshFiltering: Creating itkDiscreteCurvatureQuadEdgeMeshFilter submodule. -- ITKQuadEdgeMeshFiltering: Creating itkDiscreteCurvatureTensorQuadEdgeMeshFilter submodule. -- ITKQuadEdgeMeshFiltering: Creating itkDiscreteGaussianCurvatureQuadEdgeMeshFilter submodule. -- ITKQuadEdgeMeshFiltering: Creating itkDiscreteMaximumCurvatureQuadEdgeMeshFilter submodule. -- ITKQuadEdgeMeshFiltering: Creating itkDiscreteMeanCurvatureQuadEdgeMeshFilter submodule. -- ITKQuadEdgeMeshFiltering: Creating itkDiscreteMinimumCurvatureQuadEdgeMeshFilter submodule. -- ITKQuadEdgeMeshFiltering: Creating itkDiscretePrincipalCurvaturesQuadEdgeMeshFilter submodule. -- ITKQuadEdgeMeshFiltering: Creating itkMatrixCoefficients submodule. -- ITKQuadEdgeMeshFiltering: Creating itkSmoothingQuadEdgeMeshFilter submodule. -- ITKRegionGrowing: Creating module. -- ITKRegionGrowing: Creating itkConfidenceConnectedImageFilter submodule. -- ITKRegionGrowing: Creating itkConnectedThresholdImageFilter submodule. -- ITKRegionGrowing: Creating itkIsolatedConnectedImageFilter submodule. -- ITKRegionGrowing: Creating itkNeighborhoodConnectedImageFilter submodule. -- ITKRegionGrowing: Creating itkVectorConfidenceConnectedImageFilter submodule. -- ITKVTK: Creating module. -- ITKVTK: Creating itkVTKImageExport submodule. -- ITKVTK: Creating itkVTKImageImport submodule. -- ITKVoronoi: Creating module. -- ITKVoronoi: Creating itkVoronoiSegmentationImageFilter submodule. -- ITKWatersheds: Creating module. -- ITKWatersheds: Creating itkIsolatedWatershedImageFilter submodule. -- ITKWatersheds: Creating itkMorphologicalWatershedFromMarkersImageFilter submodule. -- ITKWatersheds: Creating itkMorphologicalWatershedImageFilter submodule. -- ITKWatersheds: Creating itkTobogganImageFilter submodule. -- ITKWatersheds: Creating itkWatershedImageFilter submodule. -- ITKOptimizersv4: Creating module. -- ITKOptimizersv4: Creating itkGradientDescentOptimizerBasev4 submodule. -- ITKOptimizersv4: Creating itkGradientDescentOptimizerv4 submodule. -- ITKOptimizersv4: Creating itkObjectToObjectMetric submodule. -- ITKOptimizersv4: Creating itkObjectToObjectMetricBase submodule. -- ITKOptimizersv4: Creating itkObjectToObjectOptimizerBase submodule. -- ITKOptimizersv4: Creating itkOptimizerParameterScalesEstimator submodule. -- ITKOptimizersv4: Creating itkQuasiNewtonOptimizerv4 submodule. -- ITKOptimizersv4: Creating itkRegularStepGradientDescentOptimizerv4 submodule. -- ITKOptimizersv4: Creating itkSingleValuedCostFunctionv4 submodule. -- ITKMetricsv4: Creating module. -- ITKMetricsv4: Creating itkImageToImageMetricv4 submodule. -- ITKMetricsv4: Creating itkMattesMutualInformationImageToImageMetricv4 submodule. -- ITKMetricsv4: Creating itkMeanSquaresImageToImageMetricv4 submodule. -- ITKRegistrationMethodsv4: Creating module. -- ITKRegistrationMethodsv4: Creating itkImageRegistrationMethodv4 submodule. -- ITKReview: Creating module. -- ITKReview: Creating itkAreaClosingImageFilter submodule. -- ITKReview: Creating itkAreaOpeningImageFilter submodule. -- ITKReview: Creating itkBoxMeanImageFilter submodule. -- ITKReview: Creating itkBoxSigmaImageFilter submodule. -- ITKReview: Creating itkBruker2DSEQImageIO submodule. -- ITKReview: Creating itkContourExtractor2DImageFilter submodule. -- ITKReview: Creating itkDiffeomorphicDemonsRegistrationFilter submodule. -- ITKReview: Creating itkDirectFourierReconstructionImageToImageFilter submodule. -- ITKReview: Creating itkDiscreteGaussianDerivativeImageFilter submodule. -- ITKReview: Creating itkESMDemonsRegistrationFunction submodule. -- ITKReview: Creating itkFastApproximateRankImageFilter submodule. -- ITKReview: Creating itkFastSymmetricForcesDemonsRegistrationFilter submodule. -- ITKReview: Creating itkGridForwardWarpImageFilter submodule. -- ITKReview: Creating itkJPEG2000ImageIO submodule. -- ITKReview: Creating itkLabelGeometryImageFilter submodule. -- ITKReview: Creating itkMaskedRankImageFilter submodule. -- ITKReview: Creating itkMultiScaleHessianBasedMeasureImageFilter submodule. -- ITKReview: Creating itkRankImageFilter submodule. -- ITKReview: Creating itkRobustAutomaticThresholdImageFilter submodule. -- ITKReview: Creating itkScalarChanAndVeseDenseLevelSetImageFilter submodule. -- ITKReview: Creating itkScalarChanAndVeseLevelSetFunction submodule. -- ITKReview: Creating itkScalarChanAndVeseSparseLevelSetImageFilter submodule. -- ITKReview: Creating itkStochasticFractalDimensionImageFilter submodule. -- ITKReview: Creating itkVoxBoCUBImageIO submodule. -- ITKPyUtils: Creating module. -- ITKPyUtils: Creating itkPyCommand submodule. -- ITKPyUtils: Creating itkPyImageFilter submodule. -- Found Perl: /usr/bin/perl (found version "5.26.2") -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /<>/BUILD make[1]: Leaving directory '/<>' dh_auto_build -a -O--builddir=BUILD -O--parallel cd BUILD && make -j8 -Oline make[1]: Entering directory '/<>/BUILD' /usr/bin/cmake -H/<> -B/<>/BUILD --check-build-system CMakeFiles/Makefile.cmake 0 make[1]: Leaving directory '/<>/BUILD' make[1]: Entering directory '/<>/BUILD' /usr/bin/cmake -E cmake_progress_start /<>/BUILD/CMakeFiles /<>/BUILD/CMakeFiles/progress.marks make[1]: Leaving directory '/<>/BUILD' make -f CMakeFiles/Makefile2 all make -f CMakeFiles/ITKData.dir/build.make CMakeFiles/ITKData.dir/depend make -f Modules/ThirdParty/DoubleConversion/CMakeFiles/ITKDoubleConversion-all.dir/build.make Modules/ThirdParty/DoubleConversion/CMakeFiles/ITKDoubleConversion-all.dir/depend make -f Modules/ThirdParty/KWIML/CMakeFiles/ITKKWIML-all.dir/build.make Modules/ThirdParty/KWIML/CMakeFiles/ITKKWIML-all.dir/depend make -f Modules/ThirdParty/KWIML/src/itkkwiml/test/CMakeFiles/kwiml_test.dir/build.make Modules/ThirdParty/KWIML/src/itkkwiml/test/CMakeFiles/kwiml_test.dir/depend make -f Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/build.make Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/depend make -f Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/build.make Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/depend make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/DoubleConversion /<>/BUILD /<>/BUILD/Modules/ThirdParty/DoubleConversion /<>/BUILD/Modules/ThirdParty/DoubleConversion/CMakeFiles/ITKDoubleConversion-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDoubleConversion-all make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/KWIML/src/itkkwiml/test /<>/BUILD /<>/BUILD/Modules/ThirdParty/KWIML/src/itkkwiml/test /<>/BUILD/Modules/ThirdParty/KWIML/src/itkkwiml/test/CMakeFiles/kwiml_test.dir/DependInfo.cmake --color= Scanning dependencies of target kwiml_test make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/DoubleConversion/CMakeFiles/ITKDoubleConversion-all.dir/build.make Modules/ThirdParty/DoubleConversion/CMakeFiles/ITKDoubleConversion-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/DoubleConversion/CMakeFiles/ITKDoubleConversion-all.dir/build'. make -f Modules/ThirdParty/KWIML/src/itkkwiml/test/CMakeFiles/kwiml_test.dir/build.make Modules/ThirdParty/KWIML/src/itkkwiml/test/CMakeFiles/kwiml_test.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/KWIML /<>/BUILD /<>/BUILD/Modules/ThirdParty/KWIML /<>/BUILD/Modules/ThirdParty/KWIML/CMakeFiles/ITKKWIML-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKKWIML-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/KWIML/CMakeFiles/ITKKWIML-all.dir/build.make Modules/ThirdParty/KWIML/CMakeFiles/ITKKWIML-all.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/vcl /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/DependInfo.cmake --color= Scanning dependencies of target itkvcl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Building C object Modules/ThirdParty/KWIML/src/itkkwiml/test/CMakeFiles/kwiml_test.dir/test.c.o make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/build.make Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/KWIML/CMakeFiles/ITKKWIML-all.dir/build'. make[3]: Entering directory '/<>/BUILD' [ 0%] Building C object Modules/ThirdParty/KWIML/src/itkkwiml/test/CMakeFiles/kwiml_test.dir/test_abi_C.c.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 0%] Built target ITKDoubleConversion-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itknetlib.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itknetlib.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/KWSys/src/KWSys /<>/BUILD /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/DependInfo.cmake --color= Scanning dependencies of target itksys make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/build.make Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/BUILD /<>/BUILD /<>/BUILD/CMakeFiles/ITKData.dir/DependInfo.cmake --color= Scanning dependencies of target ITKData make[3]: Leaving directory '/<>/BUILD' make -f CMakeFiles/ITKData.dir/build.make CMakeFiles/ITKData.dir/build make[3]: Entering directory '/<>/BUILD' [ 0%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/CMakeFiles/itkvcl.dir/vcl_deprecated.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Building C object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/ProcessUNIX.c.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 0%] Built target ITKKWIML-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/build.make Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itknetlib.dir/DependInfo.cmake --color= Scanning dependencies of target itknetlib make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itknetlib.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itknetlib.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWIML/src/itkkwiml/test && /usr/bin/cc -DKWIML_LANGUAGE_C -DKWIML_LANGUAGE_CXX -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIE -o CMakeFiles/kwiml_test.dir/test.c.o -c /<>/Modules/ThirdParty/KWIML/src/itkkwiml/test/test.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src /<>/BUILD /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMetaIO make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/build.make Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/build make[3]: Entering directory '/<>/BUILD' [ 0%] Building C object Modules/ThirdParty/KWIML/src/itkkwiml/test/CMakeFiles/kwiml_test.dir/test_int_C.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaUtils.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itknetlib.dir/triangle.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWIML/src/itkkwiml/test && /usr/bin/cc -DKWIML_LANGUAGE_C -DKWIML_LANGUAGE_CXX -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIE -o CMakeFiles/kwiml_test.dir/test_abi_C.c.o -c /<>/Modules/ThirdParty/KWIML/src/itkkwiml/test/test_abi_C.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Building C object Modules/ThirdParty/KWIML/src/itkkwiml/test/CMakeFiles/kwiml_test.dir/test_include_C.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWIML/src/itkkwiml/test && /usr/bin/cc -DKWIML_LANGUAGE_C -DKWIML_LANGUAGE_CXX -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIE -o CMakeFiles/kwiml_test.dir/test_include_C.c.o -c /<>/Modules/ThirdParty/KWIML/src/itkkwiml/test/test_include_C.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Building CXX object Modules/ThirdParty/KWIML/src/itkkwiml/test/CMakeFiles/kwiml_test.dir/test_abi_CXX.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWIML/src/itkkwiml/test && /usr/bin/c++ -DKWIML_LANGUAGE_C -DKWIML_LANGUAGE_CXX -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/kwiml_test.dir/test_abi_CXX.cxx.o -c /<>/Modules/ThirdParty/KWIML/src/itkkwiml/test/test_abi_CXX.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Building CXX object Modules/ThirdParty/KWIML/src/itkkwiml/test/CMakeFiles/kwiml_test.dir/test_int_CXX.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWIML/src/itkkwiml/test && /usr/bin/cc -DKWIML_LANGUAGE_C -DKWIML_LANGUAGE_CXX -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIE -o CMakeFiles/kwiml_test.dir/test_int_C.c.o -c /<>/Modules/ThirdParty/KWIML/src/itkkwiml/test/test_int_C.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Building CXX object Modules/ThirdParty/KWIML/src/itkkwiml/test/CMakeFiles/kwiml_test.dir/test_include_CXX.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvcl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvcl.dir/vcl_deprecated.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/vcl_deprecated.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Linking CXX shared library ../../../../../../lib/libitkvcl-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWIML/src/itkkwiml/test && /usr/bin/c++ -DKWIML_LANGUAGE_C -DKWIML_LANGUAGE_CXX -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/kwiml_test.dir/test_int_CXX.cxx.o -c /<>/Modules/ThirdParty/KWIML/src/itkkwiml/test/test_int_CXX.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GradientAnisotropicDiffusionImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cake_easy.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GradientAnisotropicDiffusionImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/GradientAnisotropicDiffusionImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8aa41348437f595b21e08eb46726002a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Generating /<>/BUILD/ExternalData/Modules/Filtering/AntiAlias/test/Baseline/itkAntiAliasBinaryImageFilterTestBaseline.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cake_easy.png -Dname=/<>/Testing/Data/Input/cake_easy.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5970c467ac9b44e55829ccf0a1296fd1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/AntiAlias/test/Baseline/itkAntiAliasBinaryImageFilterTestBaseline.mha -Dname=/<>/Modules/Filtering/AntiAlias/test/Baseline/itkAntiAliasBinaryImageFilterTestBaseline.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8063914920e15a3958953fc8e4e4f6ff" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkvcl.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libitkvcl-4.12.so.1 -o ../../../../../../lib/libitkvcl-4.12.so.1 CMakeFiles/itkvcl.dir/vcl_deprecated.cxx.o -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Generating /<>/BUILD/ExternalData/Modules/Filtering/BiasCorrection/test/Baseline/N4ControlPoints_2D.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl && /usr/bin/cmake -E cmake_symlink_library ../../../../../../lib/libitkvcl-4.12.so.1 ../../../../../../lib/libitkvcl-4.12.so.1 ../../../../../../lib/libitkvcl-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWIML/src/itkkwiml/test && /usr/bin/c++ -DKWIML_LANGUAGE_C -DKWIML_LANGUAGE_CXX -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/kwiml_test.dir/test_include_CXX.cxx.o -c /<>/Modules/ThirdParty/KWIML/src/itkkwiml/test/test_include_CXX.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Generating /<>/BUILD/ExternalData/Modules/Filtering/BiasCorrection/test/Baseline/N4ControlPoints_3D.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Linking CXX executable kwiml_test make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/BiasCorrection/test/Baseline/N4ControlPoints_2D.nii.gz -Dname=/<>/Modules/Filtering/BiasCorrection/test/Baseline/N4ControlPoints_2D.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7bad0b2f38ca6ffca586d2d7900c6dc5" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 0%] Built target itkvcl make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/build.make Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/BiasCorrection/test/Baseline/N4ControlPoints_3D.nii.gz -Dname=/<>/Modules/Filtering/BiasCorrection/test/Baseline/N4ControlPoints_3D.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3f1872c8cefaac69687c29bce8547518" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 0%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeCompressed.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1-bin.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO /<>/BUILD /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNrrdIO make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/build.make Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/build make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeCompressed.mha -Dname=/<>/Testing/Data/Input/HeadMRVolumeCompressed.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/64d772eaeee3cd85e7233f8b20db69e7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWIML/src/itkkwiml/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/kwiml_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/kwiml_test.dir/test.c.o CMakeFiles/kwiml_test.dir/test_abi_C.c.o CMakeFiles/kwiml_test.dir/test_int_C.c.o CMakeFiles/kwiml_test.dir/test_include_C.c.o CMakeFiles/kwiml_test.dir/test_abi_CXX.cxx.o CMakeFiles/kwiml_test.dir/test_int_CXX.cxx.o CMakeFiles/kwiml_test.dir/test_include_CXX.cxx.o -o kwiml_test make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1-bin.png -Dname=/<>/Testing/Data/Input/cthead1-bin.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fa8abbd3abf4be60ab7e7ef3aff07226" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/754.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/2th_cthead1.png make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 1%] Built target kwiml_test make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/itkCMakeConfigurationTest.dir/build.make Modules/Core/Common/test/CMakeFiles/itkCMakeConfigurationTest.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/cc -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -DKWSYS_C_HAS_PTRDIFF_T=1 -DKWSYS_C_HAS_SSIZE_T=1 -o CMakeFiles/itksys.dir/ProcessUNIX.c.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/ProcessUNIX.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-100-0-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/2th_cthead1.png -Dname=/<>/Testing/Data/Input/2th_cthead1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/be688230b2ed67097039385cc13b04a8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/test /<>/BUILD /<>/BUILD/Modules/Core/Common/test /<>/BUILD/Modules/Core/Common/test/CMakeFiles/itkCMakeConfigurationTest.dir/DependInfo.cmake --color= Scanning dependencies of target itkCMakeConfigurationTest make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/itkCMakeConfigurationTest.dir/build.make Modules/Core/Common/test/CMakeFiles/itkCMakeConfigurationTest.dir/build make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-100-150-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/Base64.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building CXX object Modules/Core/Common/test/CMakeFiles/itkCMakeConfigurationTest.dir/itkCMakeConfigurationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-100-0-1.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-100-0-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5f3d3e14823057200538212df6a2d0aa" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-100-150-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-100-150-0.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-100-150-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ca8d35320f9ecb01bb3d7272e5edecbb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-100-150-1.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-100-150-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5f3d3e14823057200538212df6a2d0aa" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-200-0-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-200-0-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-200-0-0.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-200-0-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/14b596e3a23b93aeddeb717effecd666" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-200-150-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/cc -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itksys.dir/Base64.c.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/Base64.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-200-0-1.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-200-0-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4ad808f18bc322fa296277e9ddecdc93" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-200-150-0.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-200-150-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/14b596e3a23b93aeddeb717effecd666" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-200-150-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/EncodingC.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-100-0-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-200-150-1.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryDilateImageFilterTest-200-150-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4ad808f18bc322fa296277e9ddecdc93" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-100-0-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-100-0-0.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-100-0-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/06f193f618197161409b3e639862944f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/754.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/754.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-100-150-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-100-0-1.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-100-0-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6bc8e3a9210fbf978c9172eb2c46a1d6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/cc -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -DKWSYS_ENCODING_DEFAULT_CODEPAGE=CP_ACP -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itksys.dir/EncodingC.c.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/EncodingC.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/mop.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-100-150-0.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-100-150-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b3353cd45751a2202e802803667f7d30" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-100-150-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/MD5.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-200-0-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-200-0-0.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-200-0-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6328afa77c53389a5fdca56b12ff0a2b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-100-150-1.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-100-150-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e491bf516dedde14c24702e99031d2e7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-200-0-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-200-150-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/DependInfo.cmake --color= Scanning dependencies of target itkv3p_netlib make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/build make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-200-0-1.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-200-0-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/51cedd33d12dca8d880b07702bd3a3c5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-200-150-0.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-200-150-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c8d22302e206318446a3dbb5d8bb044d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-200-150-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/BinaryMathematicalMorphology/test/Baseline/itkBinaryMorphologicalClosingImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-200-150-1.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBinaryErodeImageFilterTest-200-150-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/90e87a0774ca1de86806f9e23dd4b3e9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/BinaryMathematicalMorphology/test/Baseline/itkBinaryMorphologicalClosingImageFilterTest.png -Dname=/<>/Modules/Filtering/BinaryMathematicalMorphology/test/Baseline/itkBinaryMorphologicalClosingImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/343a7988c438028c7e4bc99f22aef907" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/BinaryMathematicalMorphology/test/Baseline/itkBinaryMorphologicalClosingImageFilterTestUnsafe.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/BinaryMathematicalMorphology/test/Baseline/itkBinaryMorphologicalOpeningImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/BinaryMathematicalMorphology/test/Baseline/itkBinaryMorphologicalClosingImageFilterTestUnsafe.png -Dname=/<>/Modules/Filtering/BinaryMathematicalMorphology/test/Baseline/itkBinaryMorphologicalClosingImageFilterTestUnsafe.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2e0741e4bc38b8091ea97905c0934853" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/mop.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/mop.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/BinaryMathematicalMorphology/test/Baseline/itkBinaryMorphologicalOpeningImageFilterTest.png -Dname=/<>/Modules/Filtering/BinaryMathematicalMorphology/test/Baseline/itkBinaryMorphologicalOpeningImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6e5d33f36de5bf02bcf3c93e5600b1ab" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/BinaryThinningImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/array.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/BinaryMathematicalMorphology/test/Baseline/itkBinaryOpeningByReconstructionImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/BinaryThinningImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/Algorithms/BinaryThinningImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5b2b0521c22ee24be394da27a1c96a05" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Shapes.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/cc -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itksys.dir/MD5.c.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/MD5.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/BinaryMathematicalMorphology/test/Baseline/itkBinaryOpeningByReconstructionImageFilterTest.png -Dname=/<>/Modules/Filtering/BinaryMathematicalMorphology/test/Baseline/itkBinaryOpeningByReconstructionImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0d3a832d761029510d4626f844540df3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/itkCMakeConfigurationTest.dir/itkCMakeConfigurationTest.cxx.o -c /<>/Modules/Core/Common/test/itkCMakeConfigurationTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Classifiers/test/Baseline/itkBayesianClassifierImageFilterTestLabelMapNoPriors.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/System.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Linking CXX executable ../../../../bin/itkCMakeConfigurationTest make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Shapes.png -Dname=/<>/Testing/Data/Input/Shapes.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bd4cf375a92ff0e5f82c737e27fe786d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Classifiers/test/Baseline/itkBayesianClassifierImageFilterTestLabelMapPriors.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Classifiers/test/Baseline/itkBayesianClassifierImageFilterTestLabelMapNoPriors.png -Dname=/<>/Modules/Segmentation/Classifiers/test/Baseline/itkBayesianClassifierImageFilterTestLabelMapNoPriors.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bdd3e4b64c557752622ad832cecea91f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Statistics/ImageClassifierFilterTestClassifiedImageTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Classifiers/test/Baseline/itkBayesianClassifierImageFilterTestLabelMapPriors.png -Dname=/<>/Modules/Segmentation/Classifiers/test/Baseline/itkBayesianClassifierImageFilterTestLabelMapPriors.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/70fd57953d0966e99e6bc3df2e1d574b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Statistics/TwoDimensionTwoGaussian.dat make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Statistics/ImageClassifierFilterTestClassifiedImageTest.png -Dname=/<>/Testing/Data/Baseline/Statistics/ImageClassifierFilterTestClassifiedImageTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0d6c7e3e3b11ec6d4aaf6424cfc60156" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkCMakeConfigurationTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/itkCMakeConfigurationTest.dir/itkCMakeConfigurationTest.cxx.o -o ../../../../bin/itkCMakeConfigurationTest make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Statistics/TwoDimensionTwoGaussianTesting.dat make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Statistics/TwoDimensionTwoGaussian.dat -Dname=/<>/Testing/Data/Input/Statistics/TwoDimensionTwoGaussian.dat -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d8f6ab13bcd96a8e681a3877061f5d10" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 1%] Built target itkCMakeConfigurationTest make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/ImageBase/test/CMakeFiles/itkUnicodeIOTest.dir/build.make Modules/IO/ImageBase/test/CMakeFiles/itkUnicodeIOTest.dir/depend make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Input/bone.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Statistics/TwoDimensionTwoGaussianTesting.dat -Dname=/<>/Testing/Data/Input/Statistics/TwoDimensionTwoGaussianTesting.dat -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/55d3e14f58b5d98d3a4e82ef5e470f42" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/array.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/array.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/ImageBase/test /<>/BUILD /<>/BUILD/Modules/IO/ImageBase/test /<>/BUILD/Modules/IO/ImageBase/test/CMakeFiles/itkUnicodeIOTest.dir/DependInfo.cmake --color= Scanning dependencies of target itkUnicodeIOTest make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/ImageBase/test/CMakeFiles/itkUnicodeIOTest.dir/build.make Modules/IO/ImageBase/test/CMakeFiles/itkUnicodeIOTest.dir/build make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/parseAir.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_red.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Input/bone.txt -Dname=/<>/Modules/Filtering/Colormap/test/Input/bone.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e9916aaa8674aa8b7f2b3fa6df0d1e79" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/cc -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -DKWSYS_C_HAS_PTRDIFF_T=1 -DKWSYS_C_HAS_SSIZE_T=1 -o CMakeFiles/itksys.dir/System.c.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/System.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_red.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_red.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0b68dcc5532d23715a7bcade5536f744" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/itkUnicodeIOTest.dir/itkUnicodeIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building CXX object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/Directory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Input/Colormap_Grey.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaArrow.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Input/Colormap_Grey.png -Dname=/<>/Modules/Filtering/Colormap/test/Input/Colormap_Grey.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f469210db0f390d76e8205f8c98db8fb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_green.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/v3p_netlib_init.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_green.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_green.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8637da576c37eb8ca08c746f32e2249a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_blue.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/v3p_netlib_init.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/v3p_netlib_init.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/f77_aloc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_blue.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_blue.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2fd880e167d8cef0a292a8678eb79191" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_hot.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_hot.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_hot.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fbfeca3f43b3cad06276aaada79c384c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/f77_aloc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/f77_aloc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/exit_.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_cool.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/parseAir.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/parseAir.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/dio.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_cool.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_cool.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a7e7fffb3960cecc4772f6af0232800a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/exit_.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/exit_.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_spring.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/c_abs.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_spring.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_spring.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/642872b65ae12cfa833874d39054a939" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_summer.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/c_abs.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/c_abs.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/dio.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/dio.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/c_div.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_summer.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_summer.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9669ea665e1e2c5d0321cfcd9690bf5c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/sane.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_autumn.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/c_div.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/c_div.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/c_sqrt.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_autumn.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_autumn.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/269ab321ff26c22ee76ef22d6f105878" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_winter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaUtils.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaUtils.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaBlob.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_winter.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_winter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/00835c337749f68b63fb7bbd7c009e94" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/c++ -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itksys.dir/Directory.cxx.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/Directory.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/sane.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/sane.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building CXX object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/DynamicLoader.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_copper.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/endianAir.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/c_sqrt.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/c_sqrt.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_copper.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_copper.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9e4941ca1ff5c49a8adeec0a3dd2e41e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/cabs.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_hsv.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_hsv.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_hsv.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f545d109e20372d8bef0d3d66ea8ac2f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/endianAir.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/endianAir.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_jet.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/string.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/itkUnicodeIOTest.dir/itkUnicodeIOTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkUnicodeIOTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/cabs.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/cabs.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Linking CXX executable ../../../../bin/itkUnicodeIOTest make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/d_cnjg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_jet.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_jet.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/026bff1fea0624c7a5f46dca23bd2330" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_overunder.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/d_cnjg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/d_cnjg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_overunder.png -Dname=/<>/Modules/Filtering/Colormap/test/Baseline/RGBColormapTest_overunder.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6d25e2623746f856fb03939aa7d26020" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/d_imag.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Common/itkLineIteratorTest.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Common/itkLineIteratorTest.txt -Dname=/<>/Testing/Data/Baseline/Common/itkLineIteratorTest.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bb39a1fb03f4f1de28938bd3f81d2d0b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/CellsFluorescence1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/c++ -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -DKWSYS_SUPPORTS_SHARED_LIBS=1 -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itksys.dir/DynamicLoader.cxx.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/DynamicLoader.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/CellsFluorescence1.png -Dname=/<>/Testing/Data/Input/CellsFluorescence1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/94a72ee90010da06cd15fa28e6718638" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building CXX object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/EncodingCXX.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkUnicodeIOTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/itkUnicodeIOTest.dir/itkUnicodeIOTest.cxx.o -o ../../../../bin/itkUnicodeIOTest make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/d_imag.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/d_imag.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/d_lg10.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/RelabelComponentImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 1%] Built target itkUnicodeIOTest make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/GDCM/CMakeFiles/ITKGDCM-all.dir/build.make Modules/ThirdParty/GDCM/CMakeFiles/ITKGDCM-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaArrow.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaArrow.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/GDCM /<>/BUILD /<>/BUILD/Modules/ThirdParty/GDCM /<>/BUILD/Modules/ThirdParty/GDCM/CMakeFiles/ITKGDCM-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKGDCM-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/GDCM/CMakeFiles/ITKGDCM-all.dir/build.make Modules/ThirdParty/GDCM/CMakeFiles/ITKGDCM-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/GDCM/CMakeFiles/ITKGDCM-all.dir/build'. make[3]: Entering directory '/<>/BUILD' [ 1%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaCommand.cxx.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 1%] Built target ITKGDCM-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/ZLIB/CMakeFiles/ITKZLIB-all.dir/build.make Modules/ThirdParty/ZLIB/CMakeFiles/ITKZLIB-all.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/RelabelComponentImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/RelabelComponentImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2547b3bec44324176fea022ff43ed591" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/string.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/string.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/ZLIB /<>/BUILD /<>/BUILD/Modules/ThirdParty/ZLIB /<>/BUILD/Modules/ThirdParty/ZLIB/CMakeFiles/ITKZLIB-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKZLIB-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/ZLIB/CMakeFiles/ITKZLIB-all.dir/build.make Modules/ThirdParty/ZLIB/CMakeFiles/ITKZLIB-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/ZLIB/CMakeFiles/ITKZLIB-all.dir/build'. make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1.png -Dname=/<>/Testing/Data/Input/cthead1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e395391caad7463c8231bd5f2ce9d61b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/d_lg10.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/d_lg10.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/enum.c.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 1%] Built target ITKZLIB-all make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/d_sign.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/ConnectedComponents/test/Baseline/HardConnectedComponentImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/i_dnnt.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/ConnectedComponents/test/Baseline/HardConnectedComponentImageFilterTest.png -Dname=/<>/Modules/Segmentation/ConnectedComponents/test/Baseline/HardConnectedComponentImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f57214304fcc18763458b28ffbe8e7eb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/d_sign.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/d_sign.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/i_dnnt.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/i_dnnt.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/pow_dd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest.1.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/050e652576fc45849c6f69ffd1e31e03" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/pow_di.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0e8321484886f6d367cef10d632bbb4d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/enum.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/enum.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest2.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/pow_dd.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/pow_dd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/pow_ii.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/miscAir.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/pow_di.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/pow_di.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest2.1.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest2.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/93e98054b6b5d7a84ccae6a70e52484a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/pow_ri.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0f7b33ca4e7662f23aadb3244dd4495b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/pow_ii.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/pow_ii.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest3.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/pow_ri.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/pow_ri.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/pow_zi.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/r_cnjg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest3.1.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest3.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/74ce4c810ef0c3f3afda7922c6e1af23" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/pow_zi.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/pow_zi.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/r_imag.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/miscAir.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/miscAir.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest3.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ConnectedComponentImageFilterTest3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4c691b0fe69476857dfd7b102217734a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/r_cnjg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/r_cnjg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/biffbiff.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/itkThresholdMaximumConnectedComponentsImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/r_sign.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/r_imag.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/r_imag.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/itkThresholdMaximumConnectedComponentsImageFilterTest1.png -Dname=/<>/Testing/Data/Baseline/Algorithms/itkThresholdMaximumConnectedComponentsImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/184ceebf0e4f50a07f7fe58ec84c0684" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/s_cat.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/itkThresholdMaximumConnectedComponentsImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/r_sign.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/r_sign.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/itkThresholdMaximumConnectedComponentsImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/Algorithms/itkThresholdMaximumConnectedComponentsImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9eabaf188caeef7f216a6790c07be59f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/s_cmp.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/CellsFluorescence2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/s_cat.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/s_cat.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/CellsFluorescence2.png -Dname=/<>/Testing/Data/Input/CellsFluorescence2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d087d6ae48927b4b3d0a2a604a95c78b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/s_cmp.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/s_cmp.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/s_copy.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/sig_die.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ScalarConnectedComponentImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ScalarConnectedComponentImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ScalarConnectedComponentImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/74cf37ecca2d2a153e739915db57a4d0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/biffbiff.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/biffbiff.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorConnectedComponentImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/biffmsg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/sig_die.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/sig_die.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorConnectedComponentImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/VectorConnectedComponentImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2db72d90f0750967ebf4f26c10bfc131" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/s_copy.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/s_copy.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/MaskConnectedComponentImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/z_abs.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/c++ -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -DKWSYS_ENCODING_DEFAULT_CODEPAGE=CP_ACP -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itksys.dir/EncodingCXX.cxx.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/EncodingCXX.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/z_div.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/MaskConnectedComponentImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/MaskConnectedComponentImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1fb8332cb2767ec16c74002e640270be" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building CXX object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/Glob.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelX.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/z_abs.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/z_abs.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelX.nrrd -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelX.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f564840e2fb58b3f700dd104acc5d87a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/sobel_x.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/libf2c/z_sqrt.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/z_div.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/z_div.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/sobel_x.nii.gz -Dname=/<>/Testing/Data/Input/sobel_x.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/24a5497e253f3b57c8d45bc570749fd9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/caxpy.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelY.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelY.nrrd -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelY.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7127026d709e3516d6937fee748167db" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/biffmsg.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/biffmsg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/sobel_y.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/libf2c/z_sqrt.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/libf2c/z_sqrt.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 1%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/ccopy.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/accessors.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/sobel_y.nii.gz -Dname=/<>/Testing/Data/Input/sobel_y.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4ed6932c1825580a194f3727da3ae042" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest4x4Mean.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/caxpy.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/caxpy.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest4x4Mean.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest4x4Mean.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f087936dd0415e2557997d2bb0a58a71" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/4x4-constant.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/cdotc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/4x4-constant.png -Dname=/<>/Modules/Filtering/Convolution/test/Input/4x4-constant.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ef679bdcb26a6c398506f57c6acb75f5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest4x5Mean.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/ccopy.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/ccopy.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/cscal.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest4x5Mean.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest4x5Mean.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/081dc468b8b4a18e624757f4a7d0ec2d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/4x5-constant.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/cdotc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/cdotc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/csrot.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/4x5-constant.png -Dname=/<>/Modules/Filtering/Convolution/test/Input/4x5-constant.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c88d115502786bc8239ea679dd6a76c5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest5x5Mean.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/cscal.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/cscal.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest5x5Mean.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest5x5Mean.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d4470e8c3638377e3fee6a0a03744718" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/5x5-constant.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/csrot.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/csrot.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/cswap.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dasum.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/5x5-constant.png -Dname=/<>/Testing/Data/Input/5x5-constant.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/00eb14ebec63ff2a9cfd3d34807179c1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest4x4MeanValidRegion.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest4x4MeanValidRegion.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest4x4MeanValidRegion.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/42f6b7a8420e006ebf4a3f214905724d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest4x5MeanValidRegion.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dasum.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dasum.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest4x5MeanValidRegion.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest4x5MeanValidRegion.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8bfec116b56be554119fe224996632af" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/accessors.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/accessors.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/cswap.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/cswap.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/daxpy.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/defaultsNrrd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest5x5MeanValidRegion.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dcabs1.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest5x5MeanValidRegion.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTest5x5MeanValidRegion.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b3c9ee28a030cf877f16dc100210c543" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/level.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/level.png -Dname=/<>/Testing/Data/Input/level.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3c305c0232dce05da10c59d6884b0f56" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTConvolutionImageFilterTestSobelX.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/defaultsNrrd.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/defaultsNrrd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dcabs1.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dcabs1.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/enumsNrrd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTConvolutionImageFilterTestSobelX.nrrd -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkFFTConvolutionImageFilterTestSobelX.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6654fefe347e151d732683b92faf0612" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dcopy.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/daxpy.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/daxpy.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/ddot.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTConvolutionImageFilterTestSobelY.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTConvolutionImageFilterTestSobelY.nrrd -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkFFTConvolutionImageFilterTestSobelY.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ae06ec104bd021f009c0a80e580bdb1b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelYPeriodic.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/enumsNrrd.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/enumsNrrd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelYPeriodic.nrrd -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelYPeriodic.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/20e625e2cd80abde89fd9e4ba7f4b4b2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dcopy.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dcopy.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/ddot.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/ddot.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelXConstant.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/arraysNrrd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dgemm.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dgemv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelXConstant.nrrd -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelXConstant.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c50db8c5ee59950acababf6b2a8f1340" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelXZeroFluxNeumann.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelXZeroFluxNeumann.nrrd -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkConvolutionImageFilterTestSobelXZeroFluxNeumann.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9c9f1bc9297c3969dff26a66723ed5c9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTConvolutionImageFilterTest4x4Mean.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/arraysNrrd.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/arraysNrrd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/methodsNrrd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTConvolutionImageFilterTest4x4Mean.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkFFTConvolutionImageFilterTest4x4Mean.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ae45cfa1f568368db47d9def59495776" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTConvolutionImageFilterTest4x4MeanValidRegion.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTConvolutionImageFilterTest4x4MeanValidRegion.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkFFTConvolutionImageFilterTest4x4MeanValidRegion.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a0736f287390e6d7f69653b142a9d1d9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/NormalizedCorrelationImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dgemv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dgemv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dger.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/NormalizedCorrelationImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/NormalizedCorrelationImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/75c3d43b9ac9e6fd8c0bbd062ec90706" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/sf4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/sf4.png -Dname=/<>/Testing/Data/Input/sf4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fa9d768d0058553ffed8a2d3dec74136" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/circle.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/circle.png -Dname=/<>/Testing/Data/Input/circle.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/dc5d096627c279a4334e1cc94229eda9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest1.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8201a8a91580f9f4d345a7746d87e7d1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/methodsNrrd.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/methodsNrrd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangles.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/reorder.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangles.png -Dname=/<>/Modules/Filtering/Convolution/test/Input/FixedRectangles.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/68ba9906d836cd76e669706c5df59400" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dgemm.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dgemm.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dlamch.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/MovingRectangles.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/MovingRectangles.png -Dname=/<>/Modules/Filtering/Convolution/test/Input/MovingRectangles.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/11caed5d070b2007692f120b727a364d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangleMask1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditknetlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itknetlib.dir/triangle.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/triangle.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Linking C shared library ../../../../../../../lib/libitknetlib-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dger.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dger.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangleMask1.png -Dname=/<>/Modules/Filtering/Convolution/test/Input/FixedRectangleMask1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/070fe22112bde25091bb58e6e9259519" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/MovingRectanglesMask.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dnrm2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/MovingRectanglesMask.png -Dname=/<>/Modules/Filtering/Convolution/test/Input/MovingRectanglesMask.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/43b8aeab3fae2962dc44ddb9c2b18867" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cmake -E cmake_link_script CMakeFiles/itknetlib.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libitknetlib-4.12.so.1 -o ../../../../../../../lib/libitknetlib-4.12.so.1 CMakeFiles/itknetlib.dir/triangle.c.o -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cmake -E cmake_symlink_library ../../../../../../../lib/libitknetlib-4.12.so.1 ../../../../../../../lib/libitknetlib-4.12.so.1 ../../../../../../../lib/libitknetlib-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 2%] Built target itknetlib make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/JPEG/CMakeFiles/ITKJPEG-all.dir/build.make Modules/ThirdParty/JPEG/CMakeFiles/ITKJPEG-all.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest2.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c8205a3a9d0692f2f119259f64f96bc8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangleMask2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/JPEG /<>/BUILD /<>/BUILD/Modules/ThirdParty/JPEG /<>/BUILD/Modules/ThirdParty/JPEG/CMakeFiles/ITKJPEG-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKJPEG-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/JPEG/CMakeFiles/ITKJPEG-all.dir/build.make Modules/ThirdParty/JPEG/CMakeFiles/ITKJPEG-all.dir/build make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangleMask2.png -Dname=/<>/Modules/Filtering/Convolution/test/Input/FixedRectangleMask2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bd14f2636ced4a44b64d621a6983d1d3" make[3]: Leaving directory '/<>/BUILD' make[3]: Nothing to be done for 'Modules/ThirdParty/JPEG/CMakeFiles/ITKJPEG-all.dir/build'. make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest3.png make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 2%] Built target ITKJPEG-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/NIFTI/CMakeFiles/ITKNIFTI-all.dir/build.make Modules/ThirdParty/NIFTI/CMakeFiles/ITKNIFTI-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dnrm2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dnrm2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/NIFTI /<>/BUILD /<>/BUILD/Modules/ThirdParty/NIFTI /<>/BUILD/Modules/ThirdParty/NIFTI/CMakeFiles/ITKNIFTI-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNIFTI-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/NIFTI/CMakeFiles/ITKNIFTI-all.dir/build.make Modules/ThirdParty/NIFTI/CMakeFiles/ITKNIFTI-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/NIFTI/CMakeFiles/ITKNIFTI-all.dir/build'. make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/drot.c.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 2%] Built target ITKNIFTI-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/PNG/CMakeFiles/ITKPNG-all.dir/build.make Modules/ThirdParty/PNG/CMakeFiles/ITKPNG-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dlamch.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dlamch.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/c++ -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itksys.dir/Glob.cxx.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/Glob.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest3.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ee7d382b5eb8b0842657bc6b6def5eaa" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building CXX object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/RegularExpression.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/drotg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangleMask3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/PNG /<>/BUILD /<>/BUILD/Modules/ThirdParty/PNG /<>/BUILD/Modules/ThirdParty/PNG/CMakeFiles/ITKPNG-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPNG-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/PNG/CMakeFiles/ITKPNG-all.dir/build.make Modules/ThirdParty/PNG/CMakeFiles/ITKPNG-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/PNG/CMakeFiles/ITKPNG-all.dir/build'. make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/reorder.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/reorder.c make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 2%] Built target ITKPNG-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/TIFF/CMakeFiles/ITKTIFF-all.dir/build.make Modules/ThirdParty/TIFF/CMakeFiles/ITKTIFF-all.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangleMask3.png -Dname=/<>/Modules/Filtering/Convolution/test/Input/FixedRectangleMask3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/841f7e45f7031ddbfede312483499c37" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/axis.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/TIFF /<>/BUILD /<>/BUILD/Modules/ThirdParty/TIFF /<>/BUILD/Modules/ThirdParty/TIFF/CMakeFiles/ITKTIFF-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTIFF-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/TIFF/CMakeFiles/ITKTIFF-all.dir/build.make Modules/ThirdParty/TIFF/CMakeFiles/ITKTIFF-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/TIFF/CMakeFiles/ITKTIFF-all.dir/build'. make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest4.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d6a7a3c53d84dc3f3002a8dd7f4a4864" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 2%] Built target ITKTIFF-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/GIFTI/src/gifticlib/CMakeFiles/ITKgiftiio.dir/build.make Modules/ThirdParty/GIFTI/src/gifticlib/CMakeFiles/ITKgiftiio.dir/depend make[3]: Entering directory '/<>/BUILD' [ 2%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/MovingRectanglesCropped.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/GIFTI/src/gifticlib /<>/BUILD /<>/BUILD/Modules/ThirdParty/GIFTI/src/gifticlib /<>/BUILD/Modules/ThirdParty/GIFTI/src/gifticlib/CMakeFiles/ITKgiftiio.dir/DependInfo.cmake --color= Scanning dependencies of target ITKgiftiio make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/GIFTI/src/gifticlib/CMakeFiles/ITKgiftiio.dir/build.make Modules/ThirdParty/GIFTI/src/gifticlib/CMakeFiles/ITKgiftiio.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/drot.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/drot.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/MovingRectanglesCropped.png -Dname=/<>/Modules/Filtering/Convolution/test/Input/MovingRectanglesCropped.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/36ad42373b0ebad83d653a522f150260" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dscal.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/drotg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/drotg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dswap.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 2%] Building C object Modules/ThirdParty/GIFTI/src/gifticlib/CMakeFiles/ITKgiftiio.dir/gifti_io.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest5.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest5.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkMaskedFFTNormalizedCorrelationImageFilterTest5.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/58ae75338383177a8173aaae3a0e0de6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTNormalizedCorrelationImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dscal.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dscal.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTNormalizedCorrelationImageFilterTest1.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkFFTNormalizedCorrelationImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/30d4965fd56c7597f23819210d19259b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dtrmm.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangle1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dswap.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dswap.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dtrmv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangle1.png -Dname=/<>/Modules/Filtering/Convolution/test/Input/FixedRectangle1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c32e19ddfadf61b0a445ee81f3f99dd9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTNormalizedCorrelationImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTNormalizedCorrelationImageFilterTest2.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkFFTNormalizedCorrelationImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6104f08dd75a35e901895114ee225c5d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangle2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangle2.png -Dname=/<>/Modules/Filtering/Convolution/test/Input/FixedRectangle2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/03687bf6829805d37d7272d29bc7bd57" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTNormalizedCorrelationImageFilterTest3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTNormalizedCorrelationImageFilterTest3.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkFFTNormalizedCorrelationImageFilterTest3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/38a531e3ddf4a8fc781c54a4a3e65615" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/axis.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/axis.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangle3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/simple.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Input/FixedRectangle3.png -Dname=/<>/Modules/Filtering/Convolution/test/Input/FixedRectangle3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f010047815a9f50675e59ea97157b257" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTNormalizedCorrelationImageFilterTest4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dtrmv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dtrmv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dtrsv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Convolution/test/Baseline/itkFFTNormalizedCorrelationImageFilterTest4.png -Dname=/<>/Modules/Filtering/Convolution/test/Baseline/itkFFTNormalizedCorrelationImageFilterTest4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5729a9f3d2568c45fc569cff3b101fae" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkRichardsonLucyDeconvolutionImageFilterGaussianKernelTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkRichardsonLucyDeconvolutionImageFilterGaussianKernelTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkRichardsonLucyDeconvolutionImageFilterGaussianKernelTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3da0f64b1628661e57c6fd8d205c8007" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Input/itkDeconvolutionImageFilterTestInput.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Input/itkDeconvolutionImageFilterTestInput.png -Dname=/<>/Modules/Filtering/Deconvolution/test/Input/itkDeconvolutionImageFilterTestInput.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1b795a76fb3d1cec6e2dec5f8706a641" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Input/itkDeconvolutionImageFilterTestKernel.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dtrsv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dtrsv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Input/itkDeconvolutionImageFilterTestKernel.png -Dname=/<>/Modules/Filtering/Deconvolution/test/Input/itkDeconvolutionImageFilterTestKernel.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9f16f488712c428b16c9937e099ebdc0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkRichardsonLucyDeconvolutionImageFilterIrregularKernelTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dtrmm.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dtrmm.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dzasum.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/dznrm2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkRichardsonLucyDeconvolutionImageFilterIrregularKernelTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkRichardsonLucyDeconvolutionImageFilterIrregularKernelTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6e44eb27ffbcf0501272b5dd55e9a6df" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Input/itkDeconvolutionImageFilterTestKernelIrregular.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dzasum.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dzasum.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Input/itkDeconvolutionImageFilterTestKernelIrregular.tif -Dname=/<>/Modules/Filtering/Deconvolution/test/Input/itkDeconvolutionImageFilterTestKernelIrregular.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9f4a282b42dac8e37668c03c8d81e915" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/idamax.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Input/itkDeconvolutionImageFilterTestNonNullOriginInput.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/c++ -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itksys.dir/RegularExpression.cxx.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/RegularExpression.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building CXX object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/SystemTools.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/dznrm2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/dznrm2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Input/itkDeconvolutionImageFilterTestNonNullOriginInput.mha -Dname=/<>/Modules/Filtering/Deconvolution/test/Input/itkDeconvolutionImageFilterTestNonNullOriginInput.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3ad346f4177845c98c717fbaa65470de" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/isamax.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkLandweberDeconvolutionImageFilterGaussianKernelTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkLandweberDeconvolutionImageFilterGaussianKernelTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkLandweberDeconvolutionImageFilterGaussianKernelTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3c23e6f7a3017c3551d6faa30b1100ae" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkLandweberDeconvolutionImageFilterIrregularKernelTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/idamax.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/idamax.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/izamax.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/isamax.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/isamax.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkLandweberDeconvolutionImageFilterIrregularKernelTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkLandweberDeconvolutionImageFilterIrregularKernelTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bb6447cb0d3af44c120bd4d699bf6e37" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/saxpy.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkProjectedLandweberDeconvolutionImageFilterGaussianKernelTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/simple.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/simple.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/comment.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkProjectedLandweberDeconvolutionImageFilterGaussianKernelTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkProjectedLandweberDeconvolutionImageFilterGaussianKernelTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/028b0f7c7839e9dd3dde1670f30c2d68" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkProjectedLandweberDeconvolutionImageFilterIrregularKernelTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/izamax.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/izamax.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkProjectedLandweberDeconvolutionImageFilterIrregularKernelTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkProjectedLandweberDeconvolutionImageFilterIrregularKernelTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/72f3c63d6d9b7ef8e4195522ac2c9cf7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkInverseDeconvolutionImageFilterGaussianKernelTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 3%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/scnrm2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/saxpy.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/saxpy.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkInverseDeconvolutionImageFilterGaussianKernelTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkInverseDeconvolutionImageFilterGaussianKernelTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/faedc88b52d73764713632d9077ce9ff" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/scopy.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkInverseDeconvolutionImageFilterIrregularKernelTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/comment.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/comment.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/keyvalue.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/scnrm2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/scnrm2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkInverseDeconvolutionImageFilterIrregularKernelTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkInverseDeconvolutionImageFilterIrregularKernelTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/eccb42c6b5c350af616833f13276fc38" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkTikhonovDeconvolutionImageFilterGaussianKernelTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/sdot.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkTikhonovDeconvolutionImageFilterGaussianKernelTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkTikhonovDeconvolutionImageFilterGaussianKernelTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bd38749b06cd4772afcaf95d6e704463" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/scopy.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/scopy.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaBlob.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaBlob.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaContour.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkTikhonovDeconvolutionImageFilterIrregularKernelTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaDTITube.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkTikhonovDeconvolutionImageFilterIrregularKernelTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkTikhonovDeconvolutionImageFilterIrregularKernelTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fb4fa1423a0b92015c68457feea5b3d6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkWienerDeconvolutionImageFilterGaussianKernelTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/sdot.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/sdot.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkWienerDeconvolutionImageFilterGaussianKernelTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkWienerDeconvolutionImageFilterGaussianKernelTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c667f5b65c0609b1bcd8496ba208d1c8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/sgemv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/keyvalue.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/keyvalue.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkWienerDeconvolutionImageFilterIrregularKernelTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/endianNrrd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkWienerDeconvolutionImageFilterIrregularKernelTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkWienerDeconvolutionImageFilterIrregularKernelTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/58a1c99268c5f29b8b1ad1ae68529205" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkParametricBlindLeastSquaresDeconvolutionImageFilterTest.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Deconvolution/test/Baseline/itkParametricBlindLeastSquaresDeconvolutionImageFilterTest.nrrd -Dname=/<>/Modules/Filtering/Deconvolution/test/Baseline/itkParametricBlindLeastSquaresDeconvolutionImageFilterTest.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/03c08036cd7f634adae9a98f4ce7d97b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterDefaultTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/endianNrrd.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/endianNrrd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterDefaultTest.mha -Dname=/<>/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterDefaultTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b4bee91d8ca9895f4a81f61698bf0315" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/parseNrrd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Input/noisy_checkerboard.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/sgemv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/sgemv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/sger.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Input/noisy_checkerboard.mha -Dname=/<>/Modules/Filtering/Denoising/test/Input/noisy_checkerboard.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/209b3fc2b8b36136a0c78401572a17e9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTest0.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTest0.mha -Dname=/<>/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTest0.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/afb98fd35621f44a0afe6fd7cf533d51" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTestGaussian.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTestGaussian.mha -Dname=/<>/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTestGaussian.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7569d1e0cea8f4d1ee48fdc0b364d2e7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Input/checkerboard_noise10Gaussian.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Input/checkerboard_noise10Gaussian.mha -Dname=/<>/Modules/Filtering/Denoising/test/Input/checkerboard_noise10Gaussian.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7702f78cec8cab2ecea964a01a017219" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTestRician.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/sger.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/sger.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/slamch.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTestRician.mha -Dname=/<>/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTestRician.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7de52b06271a62d86026a06458b3e756" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Input/checkerboard_noise10Rician.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Input/checkerboard_noise10Rician.mha -Dname=/<>/Modules/Filtering/Denoising/test/Input/checkerboard_noise10Rician.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/28db4010e092f0fd268abea012a684ba" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTestPoisson.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTestPoisson.mha -Dname=/<>/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTestPoisson.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f6ac9bd36486749c16ded4e3cfc7cd47" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Input/checkerboard_noise10Poisson.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Input/checkerboard_noise10Poisson.mha -Dname=/<>/Modules/Filtering/Denoising/test/Input/checkerboard_noise10Poisson.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2ac24ab2749f01b29c73a16c72c6dbfd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTestTensors.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTestTensors.nrrd -Dname=/<>/Modules/Filtering/Denoising/test/Baseline/PatchBasedDenoisingImageFilterTestTensors.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0ae2c450259d7692536f43a0551eae46" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Input/noisyDiffusionTensors.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Denoising/test/Input/noisyDiffusionTensors.nrrd -Dname=/<>/Modules/Filtering/Denoising/test/Input/noisyDiffusionTensors.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9d2887fc83669ff47fec2c7fe2b4b56b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/parametersBSpline.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/GIFTI/src/gifticlib && /usr/bin/cc -DHAVE_ZLIB -DITKZLIB -DITKgiftiio_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKgiftiio.dir/gifti_io.c.o -c /<>/Modules/ThirdParty/GIFTI/src/gifticlib/gifti_io.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/slamch.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/slamch.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/parametersBSpline.txt -Dname=/<>/Testing/Data/Input/parametersBSpline.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/996cb635b6a71f0f6da2fddc7b4852c8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BigEndianCompressed.hdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/snrm2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/GIFTI/src/gifticlib/CMakeFiles/ITKgiftiio.dir/gifti_xml.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BigEndianCompressed.hdr -Dname=/<>/Testing/Data/Input/BigEndianCompressed.hdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9fdff8265e89142c1fa325614ec2cc0f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BigEndianCompressed.img make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/snrm2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/snrm2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BigEndianCompressed.img -Dname=/<>/Testing/Data/Input/BigEndianCompressed.img -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9c372c4ecf4833e82f36c6f0d086f911" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/srot.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/parseNrrd.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/parseNrrd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/gzio.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BigEndianCompressed.img.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BigEndianCompressed.img.gz -Dname=/<>/Testing/Data/Input/BigEndianCompressed.img.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/176c069ef312b0ff3c624e8aad19e441" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BigEndian.hdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BigEndian.hdr -Dname=/<>/Testing/Data/Input/BigEndian.hdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9fdff8265e89142c1fa325614ec2cc0f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/srot.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/srot.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BigEndian.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/srotg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaCommand.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaCommand.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaEllipse.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BigEndian.mhd -Dname=/<>/Testing/Data/Input/BigEndian.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3d96ee5c1ccb34f71c4d02a5306390a2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BigEndian.img make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BigEndian.img -Dname=/<>/Testing/Data/Input/BigEndian.img -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9c372c4ecf4833e82f36c6f0d086f911" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/srotg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/srotg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/LittleEndianCompressed.hdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/sscal.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/LittleEndianCompressed.hdr -Dname=/<>/Testing/Data/Input/LittleEndianCompressed.hdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4ca5ff75fe543e991a9c7e4c37a37fc4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/LittleEndianCompressed.img.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/gzio.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/gzio.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/LittleEndianCompressed.img.gz -Dname=/<>/Testing/Data/Input/LittleEndianCompressed.img.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e3d5fd21b8be8ea4b8f9bd2eb228de35" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/LittleEndian.hdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/read.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/LittleEndian.hdr -Dname=/<>/Testing/Data/Input/LittleEndian.hdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4ca5ff75fe543e991a9c7e4c37a37fc4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/LittleEndian.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/sscal.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/sscal.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/sswap.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/LittleEndian.mhd -Dname=/<>/Testing/Data/Input/LittleEndian.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/63750465c7941b47ac5426c77cf4a299" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/LittleEndian.img make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/LittleEndian.img -Dname=/<>/Testing/Data/Input/LittleEndian.img -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/61cefb1edcdef195131470f03a8238c6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/read.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/read.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/ramp.gipl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/write.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/ramp.gipl -Dname=/<>/Testing/Data/Input/ramp.gipl -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/77411a7f9359b867e69dd5fa75100982" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaContour.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaContour.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/LittleEndianZ.hdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaGroup.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/sswap.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/sswap.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/LittleEndianZ.hdr -Dname=/<>/Testing/Data/Input/LittleEndianZ.hdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4ca5ff75fe543e991a9c7e4c37a37fc4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/LittleEndianZ.img.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/xerbla.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/LittleEndianZ.img.gz -Dname=/<>/Testing/Data/Input/LittleEndianZ.img.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f1216f0003bd68c30784427365beb964" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/DicomSeries/Image0075.dcm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/DicomSeries/Image0075.dcm -Dname=/<>/Testing/Data/Input/DicomSeries/Image0075.dcm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ccc05a53f8c4a7f74b75a07b2cfba7b1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/xerbla.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/xerbla.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/DicomSeries/Image0076.dcm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/zaxpy.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/DicomSeries/Image0076.dcm -Dname=/<>/Testing/Data/Input/DicomSeries/Image0076.dcm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0866419dc414715fddc551d6a30fd423" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/DicomSeries/Image0077.dcm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/DicomSeries/Image0077.dcm -Dname=/<>/Testing/Data/Input/DicomSeries/Image0077.dcm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/94241ced01d7cff864c6371b9f68bf72" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/012345.002.050 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/zaxpy.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/zaxpy.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaDTITube.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaDTITube.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaGaussian.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/zcopy.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/012345.002.050 -Dname=/<>/Testing/Data/Input/012345.002.050 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c2fdbb35ba2a179939a8608e1320c7ac" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirection002.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirection002.mhd -Dname=/<>/Testing/Data/Input/HeadMRVolumeWithDirection002.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d9861a725178aa348b6dde0eb7fb66ad" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/DisplacementField/test/Baseline/itkTransformToDisplacementFieldFilterTestField01.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/DisplacementField/test/Baseline/itkTransformToDisplacementFieldFilterTestField01.mha -Dname=/<>/Modules/Filtering/DisplacementField/test/Baseline/itkTransformToDisplacementFieldFilterTestField01.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4b8e2cd54cb141658061594f51d7fda4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Filtering/DisplacementField/test/Baseline/itkTransformToDisplacementFieldFilterTestField02.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/DisplacementField/test/Baseline/itkTransformToDisplacementFieldFilterTestField02.mha -Dname=/<>/Modules/Filtering/DisplacementField/test/Baseline/itkTransformToDisplacementFieldFilterTestField02.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8b69e3b5f39b043acb09c37aa03eee0e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/zcopy.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/zcopy.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaEllipse.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaEllipse.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDanielssonDistanceMapImageFilterTest1.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/zdotc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaImage.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/GIFTI/src/gifticlib && /usr/bin/cc -DHAVE_ZLIB -DITKZLIB -DITKgiftiio_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKgiftiio.dir/gifti_xml.c.o -c /<>/Modules/ThirdParty/GIFTI/src/gifticlib/gifti_xml.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Linking C shared library ../../../../../lib/libITKgiftiio-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/write.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/write.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDanielssonDistanceMapImageFilterTest1.mhd -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkDanielssonDistanceMapImageFilterTest1.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/92919ab55bd627a12d08c1887a85f5a8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/format.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDanielssonDistanceMapImageFilterTest1.zraw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/GIFTI/src/gifticlib && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKgiftiio.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKgiftiio-4.12.so.1 -o ../../../../../lib/libITKgiftiio-4.12.so.1 CMakeFiles/ITKgiftiio.dir/gifti_io.c.o CMakeFiles/ITKgiftiio.dir/gifti_xml.c.o -lexpat make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/GIFTI/src/gifticlib && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libITKgiftiio-4.12.so.1 ../../../../../lib/libITKgiftiio-4.12.so.1 ../../../../../lib/libITKgiftiio-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDanielssonDistanceMapImageFilterTest1.zraw -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkDanielssonDistanceMapImageFilterTest1.zraw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/060da2e598374c37f56482aadc9e5342" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BinaryImageWithVariousShapes01.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/zdotc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/zdotc.c make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 4%] Built target ITKgiftiio make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/DCMTK/CMakeFiles/ITKDCMTK-all.dir/build.make Modules/ThirdParty/DCMTK/CMakeFiles/ITKDCMTK-all.dir/depend make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/zdotu.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BinaryImageWithVariousShapes01.png -Dname=/<>/Testing/Data/Input/BinaryImageWithVariousShapes01.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d5d57bdfe6caff2c25652440cdc81500" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/DCMTK /<>/BUILD /<>/BUILD/Modules/ThirdParty/DCMTK /<>/BUILD/Modules/ThirdParty/DCMTK/CMakeFiles/ITKDCMTK-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDCMTK-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/DCMTK/CMakeFiles/ITKDCMTK-all.dir/build.make Modules/ThirdParty/DCMTK/CMakeFiles/ITKDCMTK-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/DCMTK/CMakeFiles/ITKDCMTK-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 4%] Built target ITKDCMTK-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/DICOMParser/src/DICOMParser/CMakeFiles/ITKDICOMParser.dir/build.make Modules/ThirdParty/DICOMParser/src/DICOMParser/CMakeFiles/ITKDICOMParser.dir/depend make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDanielssonDistanceMapImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/format.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/format.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDanielssonDistanceMapImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkDanielssonDistanceMapImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d7fc84a2bd0fa738da1e04ba7733067e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/DICOMParser/src/DICOMParser /<>/BUILD /<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser /<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser/CMakeFiles/ITKDICOMParser.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDICOMParser make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/DICOMParser/src/DICOMParser/CMakeFiles/ITKDICOMParser.dir/build.make Modules/ThirdParty/DICOMParser/src/DICOMParser/CMakeFiles/ITKDICOMParser.dir/build make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/formatNRRD.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedDanielssonDistanceMapImageFilterTest1.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/DICOMParser/src/DICOMParser/CMakeFiles/ITKDICOMParser.dir/DICOMSource.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/zdotu.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/zdotu.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedDanielssonDistanceMapImageFilterTest1.mhd -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedDanielssonDistanceMapImageFilterTest1.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/22aa91fe33525705e4a23908d342ab38" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaGroup.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaGroup.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedDanielssonDistanceMapImageFilterTest1.zraw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaImageUtils.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/zdrot.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedDanielssonDistanceMapImageFilterTest1.zraw -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedDanielssonDistanceMapImageFilterTest1.zraw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/473dd64ea4844c3b4e81b2ce2cb5eb41" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedDanielssonDistanceMapImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedDanielssonDistanceMapImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedDanielssonDistanceMapImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d7fc84a2bd0fa738da1e04ba7733067e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest3D.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest3D.mhd -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest3D.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fea7ae981246c13000da99f1a2953900" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest3D.zraw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/zdrot.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/zdrot.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/zdscal.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest3D.zraw -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest3D.zraw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9f2c64bec9c93cf6d1c4a7338bda90a0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BinarySquare3D.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/formatNRRD.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/formatNRRD.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BinarySquare3D.mhd -Dname=/<>/Testing/Data/Input/BinarySquare3D.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/61a4e66c730db6ceb9f9e9a81f872156" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BinarySquare3D.zraw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/encoding.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/zdscal.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/zdscal.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BinarySquare3D.zraw -Dname=/<>/Testing/Data/Input/BinarySquare3D.zraw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/469134a157faedcc573ee2345e67c4a0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/zgemm.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaGaussian.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaGaussian.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest4D.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaLandmark.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest4D.mhd -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest4D.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a6e1e1b2a21228e1dd2a25926f2b8b39" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/encoding.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/encoding.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest4D.zraw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/encodingRaw.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest4D.zraw -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest4D.zraw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/dd8c27bd9604591d5b7772c6920d07d2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BinarySquare4D.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BinarySquare4D.mhd -Dname=/<>/Testing/Data/Input/BinarySquare4D.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/104fec4653a9dbf962aa71f9c6876e85" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaImageUtils.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaImageUtils.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaLine.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BinarySquare4D.zraw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BinarySquare4D.zraw -Dname=/<>/Testing/Data/Input/BinarySquare4D.zraw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5445edc8a527bede384d95ae9e5cd870" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/encodingRaw.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/encodingRaw.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest1.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/encodingAscii.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest1.mhd -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest1.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/18784f50c4fb7cb4abacdef63d704ea0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/zgemm.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/zgemm.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest1.zraw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser && /usr/bin/c++ -DITKDICOMParser_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKDICOMParser.dir/DICOMSource.cxx.o -c /<>/Modules/ThirdParty/DICOMParser/src/DICOMParser/DICOMSource.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/zgemv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest1.zraw -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest1.zraw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/aceb335fadf607a446d03f6d7455fe22" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/SquareBinary201.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/DICOMParser/src/DICOMParser/CMakeFiles/ITKDICOMParser.dir/DICOMBuffer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/SquareBinary201.png -Dname=/<>/Testing/Data/Input/SquareBinary201.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b10a99aeeae367defa37458971e3da4c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest2.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/encodingAscii.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/encodingAscii.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/encodingHex.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest2.mhd -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest2.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b0dd2b67d355788d3cc9d6e2823f98eb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest2.zraw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest2.zraw -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest2.zraw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3f0f576d3cb0de1daa1a28098b132405" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BrainSliceBinary.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BrainSliceBinary.png -Dname=/<>/Testing/Data/Input/BrainSliceBinary.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bafc89073bd2b5a28679fd9f8630fd23" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/zgemv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/zgemv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/zgerc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest3.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest3.mhd -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest3.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0706be08c702e7a4a7e7a7ef169dd2c7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest3.zraw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/encodingHex.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/encodingHex.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/zgerc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/zgerc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/encodingGzip.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest3.zraw -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkSignedMaurerDistanceMapImageFilterTest3.zraw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ec2119635d7605a0694f4ee197857962" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/zgeru.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/LungSliceBinary.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/LungSliceBinary.png -Dname=/<>/Testing/Data/Input/LungSliceBinary.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/19e5d541cab5a9fe9df26aa5f0b7e1e4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/hexa2.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/c++ -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -DKWSYS_CXX_HAS_ENVIRON_IN_STDLIB_H=0 -DKWSYS_CXX_HAS_SETENV=1 -DKWSYS_CXX_HAS_UNSETENV=1 -DKWSYS_CXX_HAS_UTIMENSAT=1 -DKWSYS_CXX_HAS_UTIMES=1 -DKWSYS_CXX_STAT_HAS_ST_MTIM=1 -DKWSYS_CXX_STAT_HAS_ST_MTIMESPEC=0 -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itksys.dir/SystemTools.cxx.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/SystemTools.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/CommandLineArguments.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/hexa2.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/hexa2.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ef00aa411de1e51b38152ec6ca34017f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/zgeru.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/zgeru.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/hexa3.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/zscal.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/hexa3.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/hexa3.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6da2e7ef21ca07d767d6496b24296d22" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/hexa4-grav.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/encodingGzip.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/encodingGzip.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/hexa4-grav.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/hexa4-grav.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/242efb6701638019ed94e6ca8c3d5c6b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/subset.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tetra2.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser && /usr/bin/c++ -DITKDICOMParser_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKDICOMParser.dir/DICOMBuffer.cxx.o -c /<>/Modules/ThirdParty/DICOMParser/src/DICOMParser/DICOMBuffer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tetra2.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/tetra2.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9d2f64706a2ff39276875ff571097a26" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/DICOMParser/src/DICOMParser/CMakeFiles/ITKDICOMParser.dir/DICOMFile.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/zscal.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/zscal.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tetra3.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/zswap.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tetra3.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/tetra3.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/658c001abee060f773e9f69eae66cb47" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tetra4-grav.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tetra4-grav.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/tetra4-grav.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5fa1016d002816d1379d97d9c4b48693" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/quad2-small.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/quad2-small.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/quad2-small.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/78554f3644f94848c029bf8a3cd8c5e6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/zswap.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/zswap.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/quad2-strain.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/ztrmm.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/quad2-strain.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/quad2-strain.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/27642a9abfac60e924c4bbad4ff1928f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/quad4.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/subset.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/subset.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/quad4.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/quad4.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/27c87379c86d83b12c7a350c6d94a26d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/quad6-grav.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaLandmark.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaLandmark.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/encodingBzip2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/quad6-grav.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/quad6-grav.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8dfbdfd93a2a874825eecb6e3d63c5b6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaMesh.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/quad-lm.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/quad-lm.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/quad-lm.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/58398c3bdf97a42190cc23465a5dedd1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/trapezoid.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/encodingBzip2.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/encodingBzip2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/trapezoid.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/trapezoid.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/60e2e1a9bb3191453f6fee30a2ac62f5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/formatEPS.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaLine.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaLine.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tri2.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 4%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tri2.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/tri2.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1888ff35f3d60ecfd931ba066d472c2d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tri3.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/ztrmm.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/ztrmm.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/ztrmv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/formatEPS.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/formatEPS.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tri3.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/tri3.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/91e65c3375c5bd8c53d454aaa025f98a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/formatPNG.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tri3-e.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tri3-e.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/tri3-e.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/12e9a0116dd654f5b63970cb025dd366" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tri3-q.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser && /usr/bin/c++ -DITKDICOMParser_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKDICOMParser.dir/DICOMFile.cxx.o -c /<>/Modules/ThirdParty/DICOMParser/src/DICOMParser/DICOMFile.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/tri3-q.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/tri3-q.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bb070a7cb7787c341df5739d793984b0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building CXX object Modules/ThirdParty/DICOMParser/src/DICOMParser/CMakeFiles/ITKDICOMParser.dir/DICOMParser.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/truss.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/formatPNG.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/formatPNG.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/truss.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/truss.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3bc4150bb927930cfd839e9c00325957" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/formatPNM.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0LinearQuadrilateralStrainTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/ztrmv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/ztrmv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/blas/ztrsv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0LinearQuadrilateralStrainTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/2DC0LinearQuadrilateralStrainTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c2df575b338ab592c200b3c98ff44244" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0LinearQuadrilateralMembraneTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0LinearQuadrilateralMembraneTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/2DC0LinearQuadrilateralMembraneTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3b1d82f12af90a0d3afa7c9478f5622c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/formatPNM.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/formatPNM.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0LinearTriangleMembraneTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/formatText.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0LinearTriangleMembraneTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/2DC0LinearTriangleMembraneTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7abf99c83974edccef92c372f876fdf2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0LinearTriangleStressTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0LinearTriangleStressTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/2DC0LinearTriangleStressTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0f1d91ff3a37775f4514b1dee454fdc9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0LinearTriangleStrainTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaImage.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaImage.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaOutput.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/formatText.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/formatText.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/NrrdIO/src/NrrdIO/CMakeFiles/ITKNrrdIO.dir/formatVTK.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0LinearTriangleStrainTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/2DC0LinearTriangleStrainTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/de6b94d1b8afe26ef5ddd167a204352d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0QuadraticTriangleStrainTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0QuadraticTriangleStrainTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/2DC0QuadraticTriangleStrainTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/98d0b2a56e8cd04d3a565517451d4248" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0QuadraticTriangleStressTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0QuadraticTriangleStressTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/2DC0QuadraticTriangleStressTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d2311b455cf122ad0f16b3234fe7e97b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0LinearLineStressTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/blas/ztrsv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/blas/ztrsv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cc -DITKNrrdIO_EXPORTS -DTEEM_BUILD -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB=1 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/ITKNrrdIO.dir/formatVTK.c.o -c /<>/Modules/ThirdParty/NrrdIO/src/NrrdIO/formatVTK.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/arpack/dgetv0.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Linking C shared library ../../../../../lib/libITKNrrdIO-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC0LinearLineStressTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/2DC0LinearLineStressTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/97a7cf6de91112d6726c33aa35003e5c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC1BeamTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/2DC1BeamTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/2DC1BeamTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b8fa7d3f448c52df46a5a2272e23f6c5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/3DC0LinearHexahedronStrainTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKNrrdIO.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKNrrdIO-4.12.so.1 -o ../../../../../lib/libITKNrrdIO-4.12.so.1 CMakeFiles/ITKNrrdIO.dir/754.c.o CMakeFiles/ITKNrrdIO.dir/mop.c.o CMakeFiles/ITKNrrdIO.dir/array.c.o CMakeFiles/ITKNrrdIO.dir/parseAir.c.o CMakeFiles/ITKNrrdIO.dir/dio.c.o CMakeFiles/ITKNrrdIO.dir/sane.c.o CMakeFiles/ITKNrrdIO.dir/endianAir.c.o CMakeFiles/ITKNrrdIO.dir/string.c.o CMakeFiles/ITKNrrdIO.dir/enum.c.o CMakeFiles/ITKNrrdIO.dir/miscAir.c.o CMakeFiles/ITKNrrdIO.dir/biffbiff.c.o CMakeFiles/ITKNrrdIO.dir/biffmsg.c.o CMakeFiles/ITKNrrdIO.dir/accessors.c.o CMakeFiles/ITKNrrdIO.dir/defaultsNrrd.c.o CMakeFiles/ITKNrrdIO.dir/enumsNrrd.c.o CMakeFiles/ITKNrrdIO.dir/arraysNrrd.c.o CMakeFiles/ITKNrrdIO.dir/methodsNrrd.c.o CMakeFiles/ITKNrrdIO.dir/reorder.c.o CMakeFiles/ITKNrrdIO.dir/axis.c.o CMakeFiles/ITKNrrdIO.dir/simple.c.o CMakeFiles/ITKNrrdIO.dir/comment.c.o CMakeFiles/ITKNrrdIO.dir/keyvalue.c.o CMakeFiles/ITKNrrdIO.dir/endianNrrd.c.o CMakeFiles/ITKNrrdIO.dir/parseNrrd.c.o CMakeFiles/ITKNrrdIO.dir/gzio.c.o CMakeFiles/ITKNrrdIO.dir/read.c.o CMakeFiles/ITKNrrdIO.dir/write.c.o CMakeFiles/ITKNrrdIO.dir/format.c.o CMakeFiles/ITKNrrdIO.dir/formatNRRD.c.o CMakeFiles/ITKNrrdIO.dir/encoding.c.o CMakeFiles/ITKNrrdIO.dir/encodingRaw.c.o CMakeFiles/ITKNrrdIO.dir/encodingAscii.c.o CMakeFiles/ITKNrrdIO.dir/encodingHex.c.o CMakeFiles/ITKNrrdIO.dir/encodingGzip.c.o CMakeFiles/ITKNrrdIO.dir/subset.c.o CMakeFiles/ITKNrrdIO.dir/encodingBzip2.c.o CMakeFiles/ITKNrrdIO.dir/formatEPS.c.o CMakeFiles/ITKNrrdIO.dir/formatPNG.c.o CMakeFiles/ITKNrrdIO.dir/formatPNM.c.o CMakeFiles/ITKNrrdIO.dir/formatText.c.o CMakeFiles/ITKNrrdIO.dir/formatVTK.c.o -lz -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libITKNrrdIO-4.12.so.1 ../../../../../lib/libITKNrrdIO-4.12.so.1 ../../../../../lib/libITKNrrdIO-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/3DC0LinearHexahedronStrainTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/3DC0LinearHexahedronStrainTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/61859ab09a11130e8bbc7be7bc94eb31" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/arpack/dgetv0.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/arpack/dgetv0.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/3DC0LinearHexahedronMembraneTest.meta make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 5%] Built target ITKNrrdIO make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/Expat/CMakeFiles/ITKExpat-all.dir/build.make Modules/ThirdParty/Expat/CMakeFiles/ITKExpat-all.dir/depend make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/arpack/dsaitr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/Expat /<>/BUILD /<>/BUILD/Modules/ThirdParty/Expat /<>/BUILD/Modules/ThirdParty/Expat/CMakeFiles/ITKExpat-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKExpat-all make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/3DC0LinearHexahedronMembraneTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/3DC0LinearHexahedronMembraneTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e8ca2cc765479010837277c3651ba512" make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/Expat/CMakeFiles/ITKExpat-all.dir/build.make Modules/ThirdParty/Expat/CMakeFiles/ITKExpat-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/Expat/CMakeFiles/ITKExpat-all.dir/build'. make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/3DC0LinearTetrahedronStrainTest.meta make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 5%] Built target ITKExpat-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/GIFTI/CMakeFiles/ITKGIFTI-all.dir/build.make Modules/ThirdParty/GIFTI/CMakeFiles/ITKGIFTI-all.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/3DC0LinearTetrahedronStrainTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/3DC0LinearTetrahedronStrainTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c2434e821d211d52f76388b4b6b4e0fe" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/3DC0LinearTetrahedronMembraneTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/GIFTI /<>/BUILD /<>/BUILD/Modules/ThirdParty/GIFTI /<>/BUILD/Modules/ThirdParty/GIFTI/CMakeFiles/ITKGIFTI-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKGIFTI-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/GIFTI/CMakeFiles/ITKGIFTI-all.dir/build.make Modules/ThirdParty/GIFTI/CMakeFiles/ITKGIFTI-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/GIFTI/CMakeFiles/ITKGIFTI-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 5%] Built target ITKGIFTI-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/GPUCommon/CMakeFiles/ITKGPUCommon-all.dir/build.make Modules/Core/GPUCommon/CMakeFiles/ITKGPUCommon-all.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/3DC0LinearTetrahedronMembraneTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/3DC0LinearTetrahedronMembraneTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c638ab27302f3f43f7eb6b0ddd906181" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/LoadBCMFCTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/arpack/dsaitr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/arpack/dsaitr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/GPUCommon /<>/BUILD /<>/BUILD/Modules/Core/GPUCommon /<>/BUILD/Modules/Core/GPUCommon/CMakeFiles/ITKGPUCommon-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKGPUCommon-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/GPUCommon/CMakeFiles/ITKGPUCommon-all.dir/build.make Modules/Core/GPUCommon/CMakeFiles/ITKGPUCommon-all.dir/build make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/arpack/dsapps.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Nothing to be done for 'Modules/Core/GPUCommon/CMakeFiles/ITKGPUCommon-all.dir/build'. make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/LoadBCMFCTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/LoadBCMFCTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/14925bcc4f26df107508314657188fd0" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 5%] Built target ITKGPUCommon-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/GPUFiniteDifference/CMakeFiles/ITKGPUFiniteDifference-all.dir/build.make Modules/Core/GPUFiniteDifference/CMakeFiles/ITKGPUFiniteDifference-all.dir/depend make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/LoadEdgeTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/GPUFiniteDifference /<>/BUILD /<>/BUILD/Modules/Core/GPUFiniteDifference /<>/BUILD/Modules/Core/GPUFiniteDifference/CMakeFiles/ITKGPUFiniteDifference-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKGPUFiniteDifference-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/GPUFiniteDifference/CMakeFiles/ITKGPUFiniteDifference-all.dir/build.make Modules/Core/GPUFiniteDifference/CMakeFiles/ITKGPUFiniteDifference-all.dir/build make[3]: Nothing to be done for 'Modules/Core/GPUFiniteDifference/CMakeFiles/ITKGPUFiniteDifference-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 5%] Built target ITKGPUFiniteDifference-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/GPUAnisotropicSmoothing/CMakeFiles/ITKGPUAnisotropicSmoothing-all.dir/build.make Modules/Filtering/GPUAnisotropicSmoothing/CMakeFiles/ITKGPUAnisotropicSmoothing-all.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/LoadEdgeTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/LoadEdgeTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b3947e1805ed86481df624bb520df026" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/LoadGravConstTest.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/GPUAnisotropicSmoothing /<>/BUILD /<>/BUILD/Modules/Filtering/GPUAnisotropicSmoothing /<>/BUILD/Modules/Filtering/GPUAnisotropicSmoothing/CMakeFiles/ITKGPUAnisotropicSmoothing-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKGPUAnisotropicSmoothing-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/GPUAnisotropicSmoothing/CMakeFiles/ITKGPUAnisotropicSmoothing-all.dir/build.make Modules/Filtering/GPUAnisotropicSmoothing/CMakeFiles/ITKGPUAnisotropicSmoothing-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/GPUAnisotropicSmoothing/CMakeFiles/ITKGPUAnisotropicSmoothing-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 5%] Built target ITKGPUAnisotropicSmoothing-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/GPUImageFilterBase/CMakeFiles/ITKGPUImageFilterBase-all.dir/build.make Modules/Filtering/GPUImageFilterBase/CMakeFiles/ITKGPUImageFilterBase-all.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/FEM/test/Input/LoadGravConstTest.meta -Dname=/<>/Modules/Numerics/FEM/test/Input/LoadGravConstTest.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/37d60c3f7e18da7fb5c76498af5ef00c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/GPUImageFilterBase /<>/BUILD /<>/BUILD/Modules/Filtering/GPUImageFilterBase /<>/BUILD/Modules/Filtering/GPUImageFilterBase/CMakeFiles/ITKGPUImageFilterBase-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKGPUImageFilterBase-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/GPUImageFilterBase/CMakeFiles/ITKGPUImageFilterBase-all.dir/build.make Modules/Filtering/GPUImageFilterBase/CMakeFiles/ITKGPUImageFilterBase-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/GPUImageFilterBase/CMakeFiles/ITKGPUImageFilterBase-all.dir/build'. make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirection.mhd make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 5%] Built target ITKGPUImageFilterBase-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/GPUCommon/CMakeFiles/ITKGPURegistrationCommon-all.dir/build.make Modules/Registration/GPUCommon/CMakeFiles/ITKGPURegistrationCommon-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/GPUCommon /<>/BUILD /<>/BUILD/Modules/Registration/GPUCommon /<>/BUILD/Modules/Registration/GPUCommon/CMakeFiles/ITKGPURegistrationCommon-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKGPURegistrationCommon-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/GPUCommon/CMakeFiles/ITKGPURegistrationCommon-all.dir/build.make Modules/Registration/GPUCommon/CMakeFiles/ITKGPURegistrationCommon-all.dir/build make[3]: Nothing to be done for 'Modules/Registration/GPUCommon/CMakeFiles/ITKGPURegistrationCommon-all.dir/build'. make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirection.mhd -Dname=/<>/Testing/Data/Input/HeadMRVolumeWithDirection.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3198f8bd0fc02c2a32f6bf0ce057e610" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 5%] Built target ITKGPURegistrationCommon-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/GPUPDEDeformable/CMakeFiles/ITKGPUPDEDeformableRegistration-all.dir/build.make Modules/Registration/GPUPDEDeformable/CMakeFiles/ITKGPUPDEDeformableRegistration-all.dir/depend make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Registration/FEM/test/Baseline/itkPhysicsBasedNonRigidRegistrationMethodTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/GPUPDEDeformable /<>/BUILD /<>/BUILD/Modules/Registration/GPUPDEDeformable /<>/BUILD/Modules/Registration/GPUPDEDeformable/CMakeFiles/ITKGPUPDEDeformableRegistration-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKGPUPDEDeformableRegistration-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/GPUPDEDeformable/CMakeFiles/ITKGPUPDEDeformableRegistration-all.dir/build.make Modules/Registration/GPUPDEDeformable/CMakeFiles/ITKGPUPDEDeformableRegistration-all.dir/build make[3]: Nothing to be done for 'Modules/Registration/GPUPDEDeformable/CMakeFiles/ITKGPUPDEDeformableRegistration-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 5%] Built target ITKGPUPDEDeformableRegistration-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/GPUSmoothing/CMakeFiles/ITKGPUSmoothing-all.dir/build.make Modules/Filtering/GPUSmoothing/CMakeFiles/ITKGPUSmoothing-all.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/FEM/test/Baseline/itkPhysicsBasedNonRigidRegistrationMethodTest.mha -Dname=/<>/Modules/Registration/FEM/test/Baseline/itkPhysicsBasedNonRigidRegistrationMethodTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2c8758d0e33f81463a96b93be58214c2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/GPUSmoothing /<>/BUILD /<>/BUILD/Modules/Filtering/GPUSmoothing /<>/BUILD/Modules/Filtering/GPUSmoothing/CMakeFiles/ITKGPUSmoothing-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKGPUSmoothing-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/GPUSmoothing/CMakeFiles/ITKGPUSmoothing-all.dir/build.make Modules/Filtering/GPUSmoothing/CMakeFiles/ITKGPUSmoothing-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/GPUSmoothing/CMakeFiles/ITKGPUSmoothing-all.dir/build'. make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Registration/FEM/test/Input/PBNRRFixedImage.nii.gz make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 5%] Built target ITKGPUSmoothing-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/GPUThresholding/CMakeFiles/ITKGPUThresholding-all.dir/build.make Modules/Filtering/GPUThresholding/CMakeFiles/ITKGPUThresholding-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/GPUThresholding /<>/BUILD /<>/BUILD/Modules/Filtering/GPUThresholding /<>/BUILD/Modules/Filtering/GPUThresholding/CMakeFiles/ITKGPUThresholding-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKGPUThresholding-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/GPUThresholding/CMakeFiles/ITKGPUThresholding-all.dir/build.make Modules/Filtering/GPUThresholding/CMakeFiles/ITKGPUThresholding-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/GPUThresholding/CMakeFiles/ITKGPUThresholding-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 5%] Built target ITKGPUThresholding-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/HDF5/CMakeFiles/ITKHDF5-all.dir/build.make Modules/ThirdParty/HDF5/CMakeFiles/ITKHDF5-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/arpack/dsapps.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/arpack/dsapps.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/HDF5 /<>/BUILD /<>/BUILD/Modules/ThirdParty/HDF5 /<>/BUILD/Modules/ThirdParty/HDF5/CMakeFiles/ITKHDF5-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKHDF5-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/HDF5/CMakeFiles/ITKHDF5-all.dir/build.make Modules/ThirdParty/HDF5/CMakeFiles/ITKHDF5-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/HDF5/CMakeFiles/ITKHDF5-all.dir/build'. make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/FEM/test/Input/PBNRRFixedImage.nii.gz -Dname=/<>/Modules/Registration/FEM/test/Input/PBNRRFixedImage.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0e9f722be691e729af4f8fdaf8bb322d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/arpack/dsaup2.c.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 5%] Built target ITKHDF5-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/build.make Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/depend make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Registration/FEM/test/Input/PBNRRMovingImage.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg /<>/BUILD /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/DependInfo.cmake --color= Scanning dependencies of target itkopenjpeg make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/build.make Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/build make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/FEM/test/Input/PBNRRMovingImage.nii.gz -Dname=/<>/Modules/Registration/FEM/test/Input/PBNRRMovingImage.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3ee5330ee8a923b86a523b1f250dcb7e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Registration/FEM/test/Input/PBNRRMaskImage.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/tcd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/FEM/test/Input/PBNRRMaskImage.nii.gz -Dname=/<>/Modules/Registration/FEM/test/Input/PBNRRMaskImage.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/158329621386d8c84050341221c85ecf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Registration/FEM/test/Input/PBNRRMesh.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/FEM/test/Input/PBNRRMesh.vtk -Dname=/<>/Modules/Registration/FEM/test/Input/PBNRRMesh.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c9d7fff6fbee1b9f44c9bb9fcce0b843" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTShiftImageFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/arpack/dsaup2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/arpack/dsaup2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTShiftImageFilterTest0.png -Dname=/<>/Modules/Filtering/FFT/test/Baseline/itkFFTShiftImageFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f0ba4c5206a0d5a68d25bc9583b9c84b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/arpack/dsaupd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTShiftImageFilterTestEven0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTShiftImageFilterTestEven0.png -Dname=/<>/Modules/Filtering/FFT/test/Baseline/itkFFTShiftImageFilterTestEven0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d773af8dc25e11a50863fd3b1535e166" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/mri3D.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/mri3D.mhd -Dname=/<>/Testing/Data/Input/mri3D.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5920431b5eded2d227bdd53b99f417f0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/arpack/dsaupd.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/arpack/dsaupd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/arpack/dsconv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestZeroFluxNeumann5.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestZeroFluxNeumann5.png -Dname=/<>/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestZeroFluxNeumann5.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a217ef289350ddbbb0811ddd293c3e1f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1-257.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/arpack/dsconv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/arpack/dsconv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1-257.png -Dname=/<>/Testing/Data/Input/cthead1-257.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/92e0ce90425d2c27d7288de56950f5b5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/arpack/dseigt.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestZeroFluxNeumann13.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestZeroFluxNeumann13.png -Dname=/<>/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestZeroFluxNeumann13.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/af00fdcbf6c2a317043c8c7f0d51ae90" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestZero5.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/arpack/dseigt.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/arpack/dseigt.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/arpack/dsesrt.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser && /usr/bin/c++ -DITKDICOMParser_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKDICOMParser.dir/DICOMParser.cxx.o -c /<>/Modules/ThirdParty/DICOMParser/src/DICOMParser/DICOMParser.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building CXX object Modules/ThirdParty/DICOMParser/src/DICOMParser/CMakeFiles/ITKDICOMParser.dir/DICOMAppHelper.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestZero5.png -Dname=/<>/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestZero5.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1feb0634b10b69d1bf8ea0a73a621f6b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestZero13.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestZero13.png -Dname=/<>/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestZero13.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ca71e1e86160b00cdc63adf0453e50a0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestWrap5.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/arpack/dsesrt.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/arpack/dsesrt.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/arpack/dseupd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestWrap5.png -Dname=/<>/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestWrap5.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b5df6b8e27128c54fd1eefd3440eeaf6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestWrap13.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestWrap13.png -Dname=/<>/Modules/Filtering/FFT/test/Baseline/itkFFTPadImageFilterTestWrap13.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5d7433482665b664c8c97ab458f3083f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_singleSeed_NoTopo_out.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_singleSeed_NoTopo_out.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_singleSeed_NoTopo_out.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6ae31248e0a57028522d0f484e9d24ca" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaMesh.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaMesh.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_speed.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaScene.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_speed.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_speed.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/888bb95e2a08db22cd5957afa256cc4e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/c++ -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itksys.dir/CommandLineArguments.cxx.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/CommandLineArguments.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_singleSeed.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building CXX object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/FStream.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_singleSeed.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_singleSeed.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/21ded0d47c217825634c37fa57a360b6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_singleSeed_StrictTopo_out.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_singleSeed_StrictTopo_out.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_singleSeed_StrictTopo_out.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/12ec76b4b3bd1ff953d2b5ec6e994449" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_singleSeed_NoHandlesTopo_out.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_singleSeed_NoHandlesTopo_out.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_singleSeed_NoHandlesTopo_out.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/12ec76b4b3bd1ff953d2b5ec6e994449" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_multipleSeeds_NoTopo_out.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/arpack/dseupd.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/arpack/dseupd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_multipleSeeds_NoTopo_out.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_multipleSeeds_NoTopo_out.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6ae31248e0a57028522d0f484e9d24ca" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/arpack/dsgets.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_multipleSeeds.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaObject.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaSurface.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_multipleSeeds.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_multipleSeeds.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ffee54001bf4448060969d3f5c1ab832" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_multipleSeeds_StrictTopo_out.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_multipleSeeds_StrictTopo_out.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_multipleSeeds_StrictTopo_out.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8082ed2fa086fe496ea1820eee143448" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/arpack/dsgets.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/arpack/dsgets.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/tcd.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/tcd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/arpack/dsortr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/bio.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_multipleSeeds_NoHandlesTopo_out.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_multipleSeeds_NoHandlesTopo_out.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/BrainProtonDensitySlice_multipleSeeds_NoHandlesTopo_out.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ad227ea594979fd46b0b9f23201ec2d5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/torus_multipleSeeds_NoTopo_out.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/torus_multipleSeeds_NoTopo_out.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/torus_multipleSeeds_NoTopo_out.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5621268fe405fe474bc3d28b03e03a00" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/torus.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/torus.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/torus.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/13bf5f2907fa774a581ee943fe8093b8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/torus_multipleSeeds.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/arpack/dsortr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/arpack/dsortr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/arpack/dstqrb.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/torus_multipleSeeds.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/torus_multipleSeeds.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b198c1536ea91b127534c15232682608" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/bio.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/bio.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/torus_multipleSeeds_StrictTopo_out.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/cio.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/torus_multipleSeeds_StrictTopo_out.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/torus_multipleSeeds_StrictTopo_out.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/93d2fc2f5f7ff227c1e0a37e36dcbee7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/torus_multipleSeeds_NoHandlesTopo_out.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/torus_multipleSeeds_NoHandlesTopo_out.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/torus_multipleSeeds_NoHandlesTopo_out.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/799c9c6a7d3e674a3407f67fd6ffdc7a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/c++ -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itksys.dir/FStream.cxx.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/FStream.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/wm_multipleSeeds_NoTopo_out.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building CXX object Modules/ThirdParty/KWSys/src/KWSys/CMakeFiles/itksys.dir/SystemInformation.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/wm_multipleSeeds_NoTopo_out.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/wm_multipleSeeds_NoTopo_out.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f0a449c662287bf0c46a8d2d26a995f3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/wm.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/arpack/dstqrb.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/arpack/dstqrb.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/wm.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/wm.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2b9fee5c4389f5cc2f9d89684335436d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/sqrdc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/wm_multipleSeeds.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/wm_multipleSeeds.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/wm_multipleSeeds.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5617acbe077a00f9ad629141fdf06b47" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 5%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/wm_multipleSeeds_StrictTopo_out.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/cio.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/cio.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/dwt.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/wm_multipleSeeds_StrictTopo_out.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/wm_multipleSeeds_StrictTopo_out.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/55030cc8beb43ff29d4bb2ea59e31144" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/wm_multipleSeeds_NoHandlesTopo_out.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/sqrdc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/sqrdc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/FastMarching/test/Baseline/wm_multipleSeeds_NoHandlesTopo_out.nii.gz -Dname=/<>/Modules/Filtering/FastMarching/test/Baseline/wm_multipleSeeds_NoHandlesTopo_out.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6402013248734cbcd611c2cb6b4d0aa6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/smallRGBA.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/dqrdc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/smallRGBA.mha -Dname=/<>/Testing/Data/Baseline/IO/smallRGBA.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bf0a786b6383ca83b29fbab00adc7016" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/smallRGBA.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/smallRGBA.bmp -Dname=/<>/Testing/Data/Input/smallRGBA.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f787be31f7d8cfce52997f14e9a8d1bd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/cthead1.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/dqrdc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/dqrdc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/cqrdc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/cthead1.bmp -Dname=/<>/Testing/Data/Baseline/IO/cthead1.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/01998ab2c1544aa30c2c30ee2c2a06f7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaScene.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaScene.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1.bmp -Dname=/<>/Testing/Data/Input/cthead1.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/01998ab2c1544aa30c2c30ee2c2a06f7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaTube.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/cthead254x254.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/cthead254x254.bmp -Dname=/<>/Testing/Data/Baseline/IO/cthead254x254.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/268a6d77b5592737dd4f17e9fc284ae8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead254x254.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/cqrdc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/cqrdc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/zqrdc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead254x254.bmp -Dname=/<>/Testing/Data/Input/cthead254x254.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/268a6d77b5592737dd4f17e9fc284ae8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/image_grayscale.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/image_grayscale.bmp -Dname=/<>/Testing/Data/Baseline/IO/image_grayscale.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7183d1fdcd5583c77d5cedd9dfcc7881" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/image_grayscale.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/image_grayscale.bmp -Dname=/<>/Testing/Data/Input/image_grayscale.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/93d63d510da0b4cdea34f9bbc5440cf0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaOutput.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaOutput.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/image_color.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaVesselTube.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/image_color.bmp -Dname=/<>/Testing/Data/Baseline/IO/image_color.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ac4410faf7be7b7cce2a1a8c18ec013a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/image_color.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/zqrdc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/zqrdc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/sqrsl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/image_color.bmp -Dname=/<>/Testing/Data/Input/image_color.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ac4410faf7be7b7cce2a1a8c18ec013a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaSurface.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaSurface.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/grayscale_lowerleft.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/grayscale_upperleft.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/grayscale_lowerleft.bmp -Dname=/<>/Testing/Data/Input/grayscale_lowerleft.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/22536821255ae5012d45f156d6d430e2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/color_lowerleft.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/grayscale_upperleft.bmp -Dname=/<>/Testing/Data/Input/grayscale_upperleft.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3d82d63bcff82ef473279004d7fc3034" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/color_upperleft.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/color_lowerleft.bmp -Dname=/<>/Testing/Data/Input/color_lowerleft.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/79b7ea15a3e1e1575fcbe59f9d0f0ba7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/sqrsl.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/sqrsl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/grayscale_lowerleft_rle.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/dqrsl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/color_upperleft.bmp -Dname=/<>/Testing/Data/Input/color_upperleft.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9200fe5d5e87aa99f323941bbe52fa9d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/BMP/test/Input/HeliconiusNumataPalette.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/grayscale_lowerleft_rle.bmp -Dname=/<>/Testing/Data/Input/grayscale_lowerleft_rle.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/75430609f6e0e500c729990ee8ab5e63" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/BMP/test/Input/HeliconiusNumataPalette.bmp -Dname=/<>/Modules/IO/BMP/test/Input/HeliconiusNumataPalette.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9937da02b9e3d774d25983e68a846627" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/BioRad/test/Input/biorad.pic make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/CSV/test/Input/csvFileReaderTestInput.csv make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/BioRad/test/Input/biorad.pic -Dname=/<>/Modules/IO/BioRad/test/Input/biorad.pic -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d174069b573416012e21b1af66b774c3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/dwt.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/dwt.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTestBaseline.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/CSV/test/Input/csvFileReaderTestInput.csv -Dname=/<>/Modules/IO/CSV/test/Input/csvFileReaderTestInput.csv -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cf1bc9bfe5b49a92fc3d0979f6f94005" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/event.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTestRescaledBaseline.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/dqrsl.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/dqrsl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTestBaseline.mha -Dname=/<>/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTestBaseline.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/13c4f808a23354b7357ba1b0e30cdc6c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/cqrsl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTestRescaledBaseline.mha -Dname=/<>/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTestRescaledBaseline.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a6a231692f5fe71c7f88d0cdaf3ec99b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/dicom-sc_cs-1.dcm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest2Baseline.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/dicom-sc_cs-1.dcm -Dname=/<>/Testing/Data/Input/dicom-sc_cs-1.dcm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/33f4765c31a5d2f61f4e3fa4571e2f88" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest2Baseline.mha -Dname=/<>/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest2Baseline.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e5f4ff3484882bbe93ed6c827b716645" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/zqrsl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest2RescaledBaseline.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/event.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/event.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest2RescaledBaseline.mha -Dname=/<>/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest2RescaledBaseline.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a6a231692f5fe71c7f88d0cdaf3ec99b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/image.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/itkGDCMImageIOTest.dcm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/itkGDCMImageIOTest.dcm -Dname=/<>/Testing/Data/Input/itkGDCMImageIOTest.dcm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e659067f101fbfa0a6e9b755a7d35ab3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/cqrsl.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/cqrsl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest3Baseline.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest3Baseline.mha -Dname=/<>/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest3Baseline.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0067daa32b0ede1a20e350bd646f808b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/csvdc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest3RescaledBaseline.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/zqrsl.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/zqrsl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest3RescaledBaseline.mha -Dname=/<>/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest3RescaledBaseline.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f291c30658c3e4d83d78b5d2e2aac92c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/itkGDCMImageIOTest3.dcm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/dsvdc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/image.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/image.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/itkGDCMImageIOTest3.dcm -Dname=/<>/Testing/Data/Input/itkGDCMImageIOTest3.dcm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b71fa5813d61e73ea8892b825587b062" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/j2k.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest4Baseline.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest4Baseline.mha -Dname=/<>/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest4Baseline.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/51f1fe065e477500d45c305d21743ecf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest4RescaledBaseline.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest4RescaledBaseline.mha -Dname=/<>/Modules/IO/GDCM/test/Baseline/itkGDCMImageIOTest4RescaledBaseline.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f291c30658c3e4d83d78b5d2e2aac92c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume.mhd -Dname=/<>/Testing/Data/Input/HeadMRVolume.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d810dfb9b56f8683153bb43f4bea2cec" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume.raw -Dname=/<>/Testing/Data/Input/HeadMRVolume.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/dd13d3cbfd470c6e3cd2ddb2302fd466" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/csvdc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/csvdc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/ssvdc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume.mha -Dname=/<>/Testing/Data/Input/HeadMRVolume.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b5735213f214662a0e81451f0f3200d6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/DicomSeries2/Image0075.dcm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/DicomSeries2/Image0075.dcm -Dname=/<>/Testing/Data/Input/DicomSeries2/Image0075.dcm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ccc05a53f8c4a7f74b75a07b2cfba7b1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/DicomSeries2/Image0076-missingTag.dcm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/DicomSeries2/Image0076-missingTag.dcm -Dname=/<>/Testing/Data/Input/DicomSeries2/Image0076-missingTag.dcm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/66ea9a31453055ebdf631174b53222d8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/OrthogonalDirectionsTest.dcm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/OrthogonalDirectionsTest.dcm -Dname=/<>/Testing/Data/Input/OrthogonalDirectionsTest.dcm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/930b0543bab9e57bd1264d1240cd5a4b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/OT-PAL-8-face.dcm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/dsvdc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/dsvdc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaTube.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaTube.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/OT-PAL-8-face.dcm -Dname=/<>/Testing/Data/Input/OT-PAL-8-face.dcm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/61dfde4beae2ecd7fd4acc9cab412daa" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/zsvdc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaTransform.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/GDCM/test/Input/gdcmSpacingTest.dcm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GDCM/test/Input/gdcmSpacingTest.dcm -Dname=/<>/Modules/IO/GDCM/test/Input/gdcmSpacingTest.dcm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6772e7ad0331fed4832ee98ecae4c70d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Modules/IO/GDCM/test/Input/gdcmNoSpacingTest.dcm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GDCM/test/Input/gdcmNoSpacingTest.dcm -Dname=/<>/Modules/IO/GDCM/test/Input/gdcmNoSpacingTest.dcm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/205b00b598e0eb2b6f6cb508e07a0cf1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/19771.002.001.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/19771.002.001.mha -Dname=/<>/Testing/Data/Baseline/IO/19771.002.001.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9e0f7f8a8a8b269a39286ef10fe4de27" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_ge4/19771.002.001 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/ssvdc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/ssvdc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/dpoco.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_ge4/19771.002.001 -Dname=/<>/Testing/Data/Input/test_ge4/19771.002.001 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1c8de4290fdb2962e507bee3a7df3a21" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 6%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_ge4/19771.002.002 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_ge4/19771.002.002 -Dname=/<>/Testing/Data/Input/test_ge4/19771.002.002 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/54c1d5b1bf4ecfaedb622571d2f30da4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_ge4/19771.002.003 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/zsvdc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/zsvdc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_ge4/19771.002.004 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_ge4/19771.002.003 -Dname=/<>/Testing/Data/Input/test_ge4/19771.002.003 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c17075083c85c236ee16d59f99d3add5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaVesselTube.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaVesselTube.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_ge4/19771.002.005 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaTubeGraph.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_ge4/19771.002.004 -Dname=/<>/Testing/Data/Input/test_ge4/19771.002.004 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cc95fd6d48cf5c2d1c0c9335ef375f20" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_ge4/19771.002.005 -Dname=/<>/Testing/Data/Input/test_ge4/19771.002.005 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/93039ea7f32a1c71562be17398117549" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_ge4/19771.002.006 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/113766.003.001.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/dpoco.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/dpoco.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/113766.003.001.mha -Dname=/<>/Testing/Data/Baseline/IO/113766.003.001.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/64c6cd3fe41bcf784c8e4bb7c0a0eb13" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_ge4/19771.002.006 -Dname=/<>/Testing/Data/Input/test_ge4/19771.002.006 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/55e69a4f010b4e07f0f3d4d3f9e1f7d2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/dpodi.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/dpofa.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_ge5/113766.003.001 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_ge5/113766.003.001 -Dname=/<>/Testing/Data/Input/test_ge5/113766.003.001 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c705bb0c76bc1f43bbb476ffacde9f09" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_ge5/113766.003.002 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_ge5/113766.003.002 -Dname=/<>/Testing/Data/Input/test_ge5/113766.003.002 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ffe0857b34bc908f4a7de24b28ae5537" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/dpodi.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/dpodi.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/dpofa.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/dpofa.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_ge5/113766.003.003 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linpack/dposl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/temperton/dgpfa.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_ge5/113766.003.003 -Dname=/<>/Testing/Data/Input/test_ge5/113766.003.003 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a3e4d03bb40641dc5a0567f9312f84a5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_ge5/113766.003.004 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/temperton/dgpfa.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/temperton/dgpfa.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/temperton/dgpfa2f.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linpack/dposl.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linpack/dposl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_ge5/113766.003.004 -Dname=/<>/Testing/Data/Input/test_ge5/113766.003.004 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a92970810eb74b99486f10b797389853" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/temperton/dgpfa3f.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_ge5/113766.003.005 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_ge5/113766.003.005 -Dname=/<>/Testing/Data/Input/test_ge5/113766.003.005 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0b23096db0c335f383aba3fd506509de" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_ge5/113766.003.006 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_ge5/113766.003.006 -Dname=/<>/Testing/Data/Input/test_ge5/113766.003.006 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4426f27049473b14fd044f60508ffe2f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/GE/test/Baseline/c_vf1122.fre.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GE/test/Baseline/c_vf1122.fre.mha -Dname=/<>/Modules/IO/GE/test/Baseline/c_vf1122.fre.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cdeff2d8e966baa1caff00c6b1eb84b6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/GE/test/Input/c_vf1122.fre make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GE/test/Input/c_vf1122.fre -Dname=/<>/Modules/IO/GE/test/Input/c_vf1122.fre -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/01b00af15e46ff702c5781139b82dccb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/GE/test/Input/c_vf1123.fre make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GE/test/Input/c_vf1123.fre -Dname=/<>/Modules/IO/GE/test/Input/c_vf1123.fre -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d44e199cc14f02ecfad5959a5aa8649f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/GE/test/Baseline/c_vf1210.fre.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GE/test/Baseline/c_vf1210.fre.mha -Dname=/<>/Modules/IO/GE/test/Baseline/c_vf1210.fre.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a5bf7b6187c6a54abb0079fe241bc562" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/GE/test/Input/c_vf1210.fre make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/c++ -DKWSYS_NAMESPACE=itksys -Ditksys_EXPORTS -DKWSYS_BUILD_SHARED=1 -DKWSYS_CXX_HAS_ATOL=1 -DKWSYS_CXX_HAS_ATOLL=1 -DKWSYS_CXX_HAS_GETLOADAVG=1 -DKWSYS_CXX_HAS_RLIMIT64=1 -DKWSYS_SYSTEMINFORMATION_HAS_BACKTRACE=1 -DKWSYS_SYSTEMINFORMATION_HAS_CPP_DEMANGLE=1 -DKWSYS_SYSTEMINFORMATION_HAS_SYMBOL_LOOKUP=1 -DKWSYS_SYS_HAS_IFADDRS_H=1 -DKWSYS_USE_LONG_LONG=1 -DSIZEOF_VOID_P=8 -I/<>/BUILD/Modules/ThirdParty/KWSys/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itksys.dir/SystemInformation.cxx.o -c /<>/Modules/ThirdParty/KWSys/src/KWSys/SystemInformation.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GE/test/Input/c_vf1210.fre -Dname=/<>/Modules/IO/GE/test/Input/c_vf1210.fre -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/26c83b11f1e9f35f5a2509cba06a98f4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/GE/test/Input/c_vf1211.fre make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Linking CXX shared library ../../../../../lib/libitksys-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/temperton/dgpfa3f.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/temperton/dgpfa3f.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/GE/test/Input/c_vf1211.fre -Dname=/<>/Modules/IO/GE/test/Input/c_vf1211.fre -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c831126b05b1b0c5785286cae8bde1ed" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaForm.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/I.001.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/I.001.mha -Dname=/<>/Testing/Data/Baseline/IO/I.001.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6bffad569053e24c9ffae43c36b3c4c8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_geadw/I.001 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaTransform.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_geadw/I.001 -Dname=/<>/Testing/Data/Input/test_geadw/I.001 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6e2d0e3b13c8a1752bf150caa1806411" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaArray.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_geadw/I.002 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_geadw/I.002 -Dname=/<>/Testing/Data/Input/test_geadw/I.002 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f6ac9ad3a969720c8c4654af20499e45" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/cmake -E cmake_link_script CMakeFiles/itksys.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libitksys-4.12.so.1 -o ../../../../../lib/libitksys-4.12.so.1 CMakeFiles/itksys.dir/ProcessUNIX.c.o CMakeFiles/itksys.dir/Base64.c.o CMakeFiles/itksys.dir/EncodingC.c.o CMakeFiles/itksys.dir/MD5.c.o CMakeFiles/itksys.dir/System.c.o CMakeFiles/itksys.dir/Directory.cxx.o CMakeFiles/itksys.dir/DynamicLoader.cxx.o CMakeFiles/itksys.dir/EncodingCXX.cxx.o CMakeFiles/itksys.dir/Glob.cxx.o CMakeFiles/itksys.dir/RegularExpression.cxx.o CMakeFiles/itksys.dir/SystemTools.cxx.o CMakeFiles/itksys.dir/CommandLineArguments.cxx.o CMakeFiles/itksys.dir/FStream.cxx.o CMakeFiles/itksys.dir/SystemInformation.cxx.o -ldl -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/temperton/dgpfa2f.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/temperton/dgpfa2f.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_geadw/I.003 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/KWSys/src/KWSys && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libitksys-4.12.so.1 ../../../../../lib/libitksys-4.12.so.1 ../../../../../lib/libitksys-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/temperton/dgpfa5f.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_geadw/I.003 -Dname=/<>/Testing/Data/Input/test_geadw/I.003 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/16b8a7d3853bee1dd2e6bff9c0c9ad8a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_geadw/I.004 make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 7%] Built target itksys make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/CMakeFiles/copy_python_files.dir/build.make Wrapping/Generators/Python/CMakeFiles/copy_python_files.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_geadw/I.004 -Dname=/<>/Testing/Data/Input/test_geadw/I.004 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/21afa30eaa2f3f6fd9a63d3439a5f299" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Wrapping/Generators/Python /<>/BUILD /<>/BUILD/Wrapping/Generators/Python /<>/BUILD/Wrapping/Generators/Python/CMakeFiles/copy_python_files.dir/DependInfo.cmake --color= Scanning dependencies of target copy_python_files make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/CMakeFiles/copy_python_files.dir/build.make Wrapping/Generators/Python/CMakeFiles/copy_python_files.dir/build make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_geadw/I.005 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Copying itk/__init__.py to build dir. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_geadw/I.005 -Dname=/<>/Testing/Data/Input/test_geadw/I.005 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/aa48717e25f3be48bed230a40eb7d71f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python && /usr/bin/cmake -E copy /<>/Wrapping/Generators/Python/itk/__init__.py /<>/BUILD/Wrapping/Generators/Python/itk/__init__.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_geadw/I.006 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Copying itkBase.py to build dir. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_geadw/I.006 -Dname=/<>/Testing/Data/Input/test_geadw/I.006 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6f5f3f3320964936c6f3c994ae3251ac" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python && /usr/bin/cmake -E copy /<>/Wrapping/Generators/Python/itkBase.py /<>/BUILD/Wrapping/Generators/Python/itkBase.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/3868-2-100.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Copying itkTemplate.py to build dir. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python && /usr/bin/cmake -E copy /<>/Wrapping/Generators/Python/itkTemplate.py /<>/BUILD/Wrapping/Generators/Python/itkTemplate.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/3868-2-100.mha -Dname=/<>/Testing/Data/Baseline/IO/3868-2-100.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/93989ec805c7c313e4dafc5f7cd4f5dc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Copying itkTypes.py to build dir. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaTubeGraph.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaTubeGraph.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_siemens/3868-2-100.ima make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python && /usr/bin/cmake -E copy /<>/Wrapping/Generators/Python/itkTypes.py /<>/BUILD/Wrapping/Generators/Python/itkTypes.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building CXX object Modules/ThirdParty/MetaIO/src/MetaIO/src/CMakeFiles/ITKMetaIO.dir/metaFEMObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Copying itkExtras.py to build dir. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_siemens/3868-2-100.ima -Dname=/<>/Testing/Data/Input/test_siemens/3868-2-100.ima -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8173c32479f42b87bd2f4ac495797ab2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python && /usr/bin/cmake -E copy /<>/Wrapping/Generators/Python/itkExtras.py /<>/BUILD/Wrapping/Generators/Python/itkExtras.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_siemens/3868-2-101.ima make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Copying itkLazy.py to build dir. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python && /usr/bin/cmake -E copy /<>/Wrapping/Generators/Python/itkLazy.py /<>/BUILD/Wrapping/Generators/Python/itkLazy.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_siemens/3868-2-101.ima -Dname=/<>/Testing/Data/Input/test_siemens/3868-2-101.ima -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/546bfbd0ba11e38c4ed21f7c14f3000f" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 7%] Built target copy_python_files make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBaseCastXML.dir/build.make Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBaseCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_siemens/3868-2-102.ima make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Wrapping/Generators/Python/PyBase /<>/BUILD /<>/BUILD/Wrapping/Generators/Python/PyBase /<>/BUILD/Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBaseCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPyBaseCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBaseCastXML.dir/build.make Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBaseCastXML.dir/build make[3]: Nothing to be done for 'Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBaseCastXML.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 7%] Built target ITKPyBaseCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonCastXML.dir/build.make Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_siemens/3868-2-102.ima -Dname=/<>/Testing/Data/Input/test_siemens/3868-2-102.ima -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6b3b9ec61f1288211a07d80890dd2b17" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKCommon /<>/BUILD/Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonCastXML.dir/build.make Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_siemens/3868-2-103.ima make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/temperton/dgpfa5f.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/temperton/dgpfa5f.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/temperton/gpfa.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating ../../itkFixedArray.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/j2k.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/j2k.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_siemens/3868-2-103.ima -Dname=/<>/Testing/Data/Input/test_siemens/3868-2-103.ima -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c34637c0cdd458071eee993e8d2564ad" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_siemens/3868-2-104.ima make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/j2k_lib.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_siemens/3868-2-104.ima -Dname=/<>/Testing/Data/Input/test_siemens/3868-2-104.ima -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/15571a7a44847025d4775112de127bca" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/test_siemens/3868-2-105.ima make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/temperton/gpfa.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/temperton/gpfa.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/temperton/gpfa2f.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/j2k_lib.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/j2k_lib.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/jp2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/test_siemens/3868-2-105.ima -Dname=/<>/Testing/Data/Input/test_siemens/3868-2-105.ima -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/49e6cf8dd26256a466557679d0a3045e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/ramp.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/ramp.mhd -Dname=/<>/Testing/Data/Baseline/IO/ramp.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f85c04f155ca001f2791ca72646d9c74" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/ramp.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/ramp.raw -Dname=/<>/Testing/Data/Baseline/IO/ramp.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/288bac356e2dc379c3c602a7c12a9f38" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/ramp.gipl.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/ramp.gipl.gz -Dname=/<>/Testing/Data/Input/ramp.gipl.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9878057ccf0c4b765e03c47960d076c7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a5b7.PNG make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a5b7.PNG -Dname=/<>/Testing/Data/Input/Archetype/a5b7.PNG -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0a1f8b9b502ab43255e015e95a48c82a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a5b1.PNG make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a5b1.PNG -Dname=/<>/Testing/Data/Input/Archetype/a5b1.PNG -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/eda8ecab17aa9d507c884139a9acce18" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a5b6.PNG make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a5b6.PNG -Dname=/<>/Testing/Data/Input/Archetype/a5b6.PNG -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3b6757d62fcbb4a11e8ee9d3b3a49feb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a6b1.PNG make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/jp2.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/jp2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a6b1.PNG -Dname=/<>/Testing/Data/Input/Archetype/a6b1.PNG -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a8f2b33bdec52c1580e884b5d94ce26e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/jpt.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a7b1.PNG make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaArray.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaArray.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a7b1.PNG -Dname=/<>/Testing/Data/Input/Archetype/a7b1.PNG -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ad67af529944212d849f0c33cad448fb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a7b2.PNG make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a7b3.PNG make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a7b2.PNG -Dname=/<>/Testing/Data/Input/Archetype/a7b2.PNG -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6f23d7f0198e958542103456945e6738" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a7b3.PNG -Dname=/<>/Testing/Data/Input/Archetype/a7b3.PNG -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4c0650fd15f6189625465aa2a48abbaf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/jpt.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/jpt.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a7b4.PNG make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a8b1.PNG make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/mct.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/temperton/gpfa2f.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/temperton/gpfa2f.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a7b4.PNG -Dname=/<>/Testing/Data/Input/Archetype/a7b4.PNG -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/25254dee1addb9b15269ee0b721accb9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/temperton/gpfa3f.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.001 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/a8b1.PNG -Dname=/<>/Testing/Data/Input/Archetype/a8b1.PNG -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a8c644cc76be5a656ec43c4514794c62" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.002 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.001 -Dname=/<>/Testing/Data/Input/Archetype/image.001 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/84315cd1eac36ec2ab6248bb81f1c443" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.003 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.002 -Dname=/<>/Testing/Data/Input/Archetype/image.002 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cab3461d9b2a0c6fdf976cdc3606177c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.003 -Dname=/<>/Testing/Data/Input/Archetype/image.003 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f701809fb9547ee005aa55722336b076" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaForm.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaForm.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.004 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.005 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.006 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.004 -Dname=/<>/Testing/Data/Input/Archetype/image.004 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0c309383008aa60642abd64e97d088c7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.005 -Dname=/<>/Testing/Data/Input/Archetype/image.005 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1bf45214c0a2cfc59e60dda879c3ef63" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.006 -Dname=/<>/Testing/Data/Input/Archetype/image.006 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/abafac8c791b1d2b45dcf2f4a9e29c52" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.008 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/mct.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/mct.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/mqc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.007 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.009 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.008 -Dname=/<>/Testing/Data/Input/Archetype/image.008 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7eab23a5c5e818ee88a70c8bd0b7ada7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.007 -Dname=/<>/Testing/Data/Input/Archetype/image.007 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/26e287716de59260b240c8fb1b525c49" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.009 -Dname=/<>/Testing/Data/Input/Archetype/image.009 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1b737176494177b5d1bc39fee3e27577" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/temperton/gpfa3f.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/temperton/gpfa3f.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.010 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-ascii.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/openjpeg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Archetype/image.010 -Dname=/<>/Testing/Data/Input/Archetype/image.010 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9a075bdee596b7e15dd25775fe45d6c7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/temperton/gpfa5f.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-ascii.nrrd -Dname=/<>/Testing/Data/Input/vol-ascii.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c0a0541593027198a190711be35c9179" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/temperton/setdgpfa.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/HeadMRVolume.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/HeadMRVolume.mhd -Dname=/<>/Testing/Data/Baseline/IO/HeadMRVolume.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a5fa9f74933e47b4657df479daa902f1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/HeadMRVolume.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/HeadMRVolume.raw -Dname=/<>/Testing/Data/Baseline/IO/HeadMRVolume.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/dd13d3cbfd470c6e3cd2ddb2302fd466" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirectionIdentity.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/temperton/setdgpfa.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/temperton/setdgpfa.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/mqc.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/mqc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirectionIdentity.mhd -Dname=/<>/Testing/Data/Input/HeadMRVolumeWithDirectionIdentity.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/502235b1de136b1e19dd03d05a3a9077" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/temperton/setgpfa.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/pi.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirectionIdentity.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirectionIdentity.nhdr -Dname=/<>/Testing/Data/Input/HeadMRVolumeWithDirectionIdentity.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7ecb40eebb83b65b17c24492dfcd22c0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirectionIdentity.raw.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/openjpeg.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/openjpeg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/raw.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirectionIdentity.raw.gz -Dname=/<>/Testing/Data/Input/HeadMRVolumeWithDirectionIdentity.raw.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8b68e92bae34c1504f69e92762450302" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/temperton/setgpfa.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/temperton/setgpfa.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirection.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/balanc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirection.nhdr -Dname=/<>/Testing/Data/Input/HeadMRVolumeWithDirection.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1f271304ca9addb697d0912fd3d310e6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/temperton/gpfa5f.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/temperton/gpfa5f.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/balbak.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirection.raw.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/raw.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/raw.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/t1.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirection.raw.gz -Dname=/<>/Testing/Data/Input/HeadMRVolumeWithDirection.raw.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9c2d8da0323da92e3e20e8be7bb320df" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirection001.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirection001.mhd -Dname=/<>/Testing/Data/Input/HeadMRVolumeWithDirection001.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/58a9d5c966ebc7f32ce238f0daa2eaa8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirection003.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolumeWithDirection003.mhd -Dname=/<>/Testing/Data/Input/HeadMRVolumeWithDirection003.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8565c198f91e765e5876f82921af3a46" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/itkImageNegativeSpacing.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/itkImageNegativeSpacing.mha -Dname=/<>/Testing/Data/Input/itkImageNegativeSpacing.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9cabcc139fae46ce8a372ba0f2c9cca5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1.tif -Dname=/<>/Testing/Data/Input/cthead1.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c49aba3e44e3551d07b18e486ad28423" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/balbak.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/balbak.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImage.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/cdiv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/balanc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/balanc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImage.tif -Dname=/<>/Testing/Data/Input/RGBTestImage.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/29320673132b996bdc45a764cbb6b571" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/elmhes.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/48BitTestImage.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/cdiv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/cdiv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/tgt.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/48BitTestImage.tif -Dname=/<>/Testing/Data/Input/48BitTestImage.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d67cde498d5d1b85fd291d34a6863c66" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkNoiseImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkNoiseImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkNoiseImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cb019b354ecdc06ae4e4be4a36890617" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/cthead1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/cthead1.png -Dname=/<>/Testing/Data/Baseline/IO/cthead1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8abe9bc255f279d06c7c0362feb04069" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/elmhes.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/elmhes.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/eltran.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1.jpg -Dname=/<>/Testing/Data/Input/cthead1.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a4e715c0839afdf8e7bdbacd2c81ff72" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/cthead1.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/cthead1.jpg -Dname=/<>/Testing/Data/Baseline/IO/cthead1.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ec12a93102ddb8a1ba195e8b46f45725" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser && /usr/bin/c++ -DITKDICOMParser_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKDICOMParser.dir/DICOMAppHelper.cxx.o -c /<>/Modules/ThirdParty/DICOMParser/src/DICOMParser/DICOMAppHelper.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/cthead1.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Linking CXX shared library ../../../../../lib/libITKDICOMParser-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/cthead1.tif -Dname=/<>/Testing/Data/Baseline/IO/cthead1.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/60e2b992941a86684363fee32f836bb0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/tgt.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/tgt.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1.lsm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/profile.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1.lsm -Dname=/<>/Testing/Data/Input/cthead1.lsm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/276e992e6768f3905cbdb8bcf0b80269" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDICOMParser.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKDICOMParser-4.12.so.1 -o ../../../../../lib/libITKDICOMParser-4.12.so.1 CMakeFiles/ITKDICOMParser.dir/DICOMSource.cxx.o CMakeFiles/ITKDICOMParser.dir/DICOMBuffer.cxx.o CMakeFiles/ITKDICOMParser.dir/DICOMFile.cxx.o CMakeFiles/ITKDICOMParser.dir/DICOMParser.cxx.o CMakeFiles/ITKDICOMParser.dir/DICOMAppHelper.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/tilt_series_little.mrc make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libITKDICOMParser-4.12.so.1 ../../../../../lib/libITKDICOMParser-4.12.so.1 ../../../../../lib/libITKDICOMParser-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/tilt_series_little.mrc -Dname=/<>/Testing/Data/Input/tilt_series_little.mrc -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d80a4ac201f5b9933d3c87a3dbcb16bb" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 7%] Built target ITKDICOMParser make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferenceCastXML.dir/build.make Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferenceCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/tilt_series_big.mrc make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/FiniteDifference/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKFiniteDifference /<>/BUILD/Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferenceCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFiniteDifferenceCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferenceCastXML.dir/build.make Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferenceCastXML.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/profile.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/profile.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/tilt_series_big.mrc -Dname=/<>/Testing/Data/Input/tilt_series_big.mrc -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e186d963b6c70cf8a932439a96abb038" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating ../../itkDenseFiniteDifferenceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/invert.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageLZW.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/eltran.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/eltran.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/epslon.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageLZW.tif -Dname=/<>/Testing/Data/Input/RGBTestImageLZW.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0982e9044aa183d0cd21e5039f4b1fc2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/sphere.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/sphere.vtk -Dname=/<>/Modules/IO/Mesh/test/Baseline/sphere.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/03bbddbd81884b3f3a61b88ea4911006" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFixedArray.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkFixedArray.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/epslon.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/epslon.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/pi.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/pi.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating ../../itkVector.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/sphere.fsb make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/hqr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/function_list.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/sphere.fsb -Dname=/<>/Modules/IO/Mesh/test/Baseline/sphere.fsb -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6ee8e7635ff675b563f514b94bd548a5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/sphere_curv.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/sphere_curv.vtk -Dname=/<>/Modules/IO/Mesh/test/Baseline/sphere_curv.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0ff4efffad0a58a7ea3e5878e043c4e9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/invert.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/invert.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/function_list.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/function_list.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/thickness.fcv make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/OpenJPEG/src/openjpeg/CMakeFiles/itkopenjpeg.dir/t2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/sphere.fsa make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/thickness.fcv -Dname=/<>/Modules/IO/Mesh/test/Baseline/thickness.fcv -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2de57cfb2cd385111cc3c6610e2f14df" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/sphere.fsa -Dname=/<>/Modules/IO/Mesh/test/Baseline/sphere.fsa -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/38fb3fe68d6d3b51a6e9dce3d2b50a80" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/t1.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/t1.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/cube.byu make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/sphere_curv_b.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/sphere_norm.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/cube.byu -Dname=/<>/Modules/IO/Mesh/test/Baseline/cube.byu -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a4528eb845c622c91e52d9355de83750" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/octa.off make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/sphere_curv_b.vtk -Dname=/<>/Modules/IO/Mesh/test/Baseline/sphere_curv_b.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9590dd5d0844adef944527183655cf48" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/sphere_norm.vtk -Dname=/<>/Modules/IO/Mesh/test/Baseline/sphere_norm.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/793f057df031c02360bda8181ca4633f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/hqr2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/box.obj make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/octa.off -Dname=/<>/Modules/IO/Mesh/test/Baseline/octa.off -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0da22cdfbba5762df4afb4e19eca2381" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/white.gii make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/box.obj -Dname=/<>/Modules/IO/Mesh/test/Baseline/box.obj -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/24ed25fb3240dd9dbc564db0d316abe5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/hqr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/hqr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/otqlrat.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/aparc.gii make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/white.gii -Dname=/<>/Modules/IO/Mesh/test/Baseline/white.gii -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4f6341f3d8266ea0409dce57bf5fb1ca" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/aparc.gii -Dname=/<>/Modules/IO/Mesh/test/Baseline/aparc.gii -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7d6d9b410d14f8da78d0bbe37b7f4550" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/fibers.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/SmallRampVolume.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/Mesh/test/Baseline/fibers.vtk -Dname=/<>/Modules/IO/Mesh/test/Baseline/fibers.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d0e4b593320fa21bcd5f0301fa16686b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/SmallRampVolume.mhd -Dname=/<>/Testing/Data/Baseline/IO/SmallRampVolume.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2b99fc1c96ceee40c012ab20858e8a2b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/SmallRampVolume.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolumeList.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/otqlrat.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/otqlrat.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/pythag.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/SmallRampVolume.raw -Dname=/<>/Testing/Data/Baseline/IO/SmallRampVolume.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e104421e96b2fa79b52e5b94ff684b83" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolumeList.mhd -Dname=/<>/Testing/Data/Input/MetaIO/SmallRampVolumeList.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fb4bd887b5ada811d33ce84e96843fb2" make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBaseCastXML.dir/build.make Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBaseCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolume01.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFilterBase/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageFilterBase /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBaseCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFilterBaseCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBaseCastXML.dir/build.make Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBaseCastXML.dir/build make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolume01.tif -Dname=/<>/Testing/Data/Input/MetaIO/SmallRampVolume01.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a2935336756de7efca2c225719834355" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating ../../itkBoxImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolume02.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/pythag.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/pythag.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/rebak.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/c++ -DITKMetaIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKMetaIO.dir/metaFEMObject.cxx.o -c /<>/Modules/ThirdParty/MetaIO/src/MetaIO/src/metaFEMObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolume02.tif -Dname=/<>/Testing/Data/Input/MetaIO/SmallRampVolume02.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4ea7dc5c382743e4fc31e3d577c6f325" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Linking CXX shared library ../../../../../../lib/libITKMetaIO-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 7%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolume03.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolume03.tif -Dname=/<>/Testing/Data/Input/MetaIO/SmallRampVolume03.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6f0b16f78c932603fbdb5bc6dcc3625f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolume04.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/rebak.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/rebak.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/reduc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolume04.tif -Dname=/<>/Testing/Data/Input/MetaIO/SmallRampVolume04.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/270b12eabd2113003a253988ea026bfe" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolume05.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/hqr2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/hqr2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/rg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolume05.tif -Dname=/<>/Testing/Data/Input/MetaIO/SmallRampVolume05.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fdc646422367ad84e4ea5cb1ee2e311e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cc -Ditkopenjpeg_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkopenjpeg.dir/t2.c.o -c /<>/Modules/ThirdParty/OpenJPEG/src/openjpeg/t2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolume06.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Linking C shared library ../../../../../lib/libitkopenjpeg-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolume06.tif -Dname=/<>/Testing/Data/Input/MetaIO/SmallRampVolume06.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f0563caa0485d3650359668af69aeae4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small Ramp Volume List.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMetaIO.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKMetaIO-4.12.so.1 -o ../../../../../../lib/libITKMetaIO-4.12.so.1 CMakeFiles/ITKMetaIO.dir/metaUtils.cxx.o CMakeFiles/ITKMetaIO.dir/metaArrow.cxx.o CMakeFiles/ITKMetaIO.dir/metaBlob.cxx.o CMakeFiles/ITKMetaIO.dir/metaCommand.cxx.o CMakeFiles/ITKMetaIO.dir/metaContour.cxx.o CMakeFiles/ITKMetaIO.dir/metaDTITube.cxx.o CMakeFiles/ITKMetaIO.dir/metaEllipse.cxx.o CMakeFiles/ITKMetaIO.dir/metaGroup.cxx.o CMakeFiles/ITKMetaIO.dir/metaGaussian.cxx.o CMakeFiles/ITKMetaIO.dir/metaImage.cxx.o CMakeFiles/ITKMetaIO.dir/metaImageUtils.cxx.o CMakeFiles/ITKMetaIO.dir/metaLandmark.cxx.o CMakeFiles/ITKMetaIO.dir/metaLine.cxx.o CMakeFiles/ITKMetaIO.dir/metaMesh.cxx.o CMakeFiles/ITKMetaIO.dir/metaObject.cxx.o CMakeFiles/ITKMetaIO.dir/metaOutput.cxx.o CMakeFiles/ITKMetaIO.dir/metaScene.cxx.o CMakeFiles/ITKMetaIO.dir/metaSurface.cxx.o CMakeFiles/ITKMetaIO.dir/metaTube.cxx.o CMakeFiles/ITKMetaIO.dir/metaVesselTube.cxx.o CMakeFiles/ITKMetaIO.dir/metaTransform.cxx.o CMakeFiles/ITKMetaIO.dir/metaTubeGraph.cxx.o CMakeFiles/ITKMetaIO.dir/metaForm.cxx.o CMakeFiles/ITKMetaIO.dir/metaArray.cxx.o CMakeFiles/ITKMetaIO.dir/metaFEMObject.cxx.o -lz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/reduc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/reduc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src && /usr/bin/cmake -E cmake_symlink_library ../../../../../../lib/libITKMetaIO-4.12.so.1 ../../../../../../lib/libITKMetaIO-4.12.so.1 ../../../../../../lib/libITKMetaIO-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/rs.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ List.mhd -Dname=/<>/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ List.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/129fffd7dfaa1e87ee15ffcc951cc761" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 8%] Built target ITKMetaIO make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowCastXML.dir/build.make Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/rg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/rg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small Ramp Volume 01.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkopenjpeg.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libitkopenjpeg-4.12.so.1 -o ../../../../../lib/libitkopenjpeg-4.12.so.1 CMakeFiles/itkopenjpeg.dir/tcd.c.o CMakeFiles/itkopenjpeg.dir/bio.c.o CMakeFiles/itkopenjpeg.dir/cio.c.o CMakeFiles/itkopenjpeg.dir/dwt.c.o CMakeFiles/itkopenjpeg.dir/event.c.o CMakeFiles/itkopenjpeg.dir/image.c.o CMakeFiles/itkopenjpeg.dir/j2k.c.o CMakeFiles/itkopenjpeg.dir/j2k_lib.c.o CMakeFiles/itkopenjpeg.dir/jp2.c.o CMakeFiles/itkopenjpeg.dir/jpt.c.o CMakeFiles/itkopenjpeg.dir/mct.c.o CMakeFiles/itkopenjpeg.dir/mqc.c.o CMakeFiles/itkopenjpeg.dir/openjpeg.c.o CMakeFiles/itkopenjpeg.dir/pi.c.o CMakeFiles/itkopenjpeg.dir/raw.c.o CMakeFiles/itkopenjpeg.dir/t1.c.o CMakeFiles/itkopenjpeg.dir/tgt.c.o CMakeFiles/itkopenjpeg.dir/profile.c.o CMakeFiles/itkopenjpeg.dir/invert.c.o CMakeFiles/itkopenjpeg.dir/function_list.c.o CMakeFiles/itkopenjpeg.dir/t2.c.o -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/rsg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg && /usr/bin/cmake -E cmake_symlink_library ../../../../../lib/libitkopenjpeg-4.12.so.1 ../../../../../lib/libitkopenjpeg-4.12.so.1 ../../../../../lib/libitkopenjpeg-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ 01.tif -Dname=/<>/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ 01.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a2935336756de7efca2c225719834355" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small Ramp Volume 02.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/CurvatureFlow/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCurvatureFlowCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowCastXML.dir/build.make Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 8%] Generating ../../itkCurvatureFlowImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 8%] Built target itkopenjpeg make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsCastXML.dir/build.make Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ 02.tif -Dname=/<>/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ 02.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4ea7dc5c382743e4fc31e3d577c6f325" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/rs.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/rs.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small Ramp Volume 03.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Statistics/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKStatistics /<>/BUILD/Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKStatisticsCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsCastXML.dir/build.make Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 8%] Generating ../../itkCastImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/rsg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/rsg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating ../../itkSample.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ 03.tif -Dname=/<>/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ 03.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6f0b16f78c932603fbdb5bc6dcc3625f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/tql1.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small Ramp Volume 04.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ 04.tif -Dname=/<>/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ 04.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/270b12eabd2113003a253988ea026bfe" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/tql1.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/tql1.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small Ramp Volume 05.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/tql2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ 05.tif -Dname=/<>/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ 05.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fdc646422367ad84e4ea5cb1ee2e311e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small Ramp Volume 06.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ 06.tif -Dname=/<>/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ 06.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f0563caa0485d3650359668af69aeae4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolumeRegEx.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/tql2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/tql2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/tred1.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/SmallRampVolumeRegEx.mhd -Dname=/<>/Testing/Data/Input/MetaIO/SmallRampVolumeRegEx.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/275291a17d04802cfef586755ce60328" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small Ramp Volume Reg Ex.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ Reg\ Ex.mhd -Dname=/<>/Testing/Data/Input/MetaIO/Small\ Ramp\ Volume\ Reg\ Ex.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c300be89de71ba7b926485fdd43220ea" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/MetaImageError.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/MetaImageError.mhd -Dname=/<>/Testing/Data/Input/MetaImageError.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/265fe40bd0bf2d908240cd57a893fbfe" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/mini-complex-slow.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/mini-complex-slow.nrrd -Dname=/<>/Testing/Data/Input/mini-complex-slow.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d80e83a49a93dceba9a59e18567715b8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/mini-complex-fast.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/mini-complex-fast.nrrd -Dname=/<>/Testing/Data/Baseline/IO/mini-complex-fast.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/79b26af87ae8702c7b27d15d09323058" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/mini-covector-fast.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/mini-covector-fast.nrrd -Dname=/<>/Testing/Data/Input/mini-covector-fast.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ea79a63a85642acf1913cc177cf513ac" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/tred1.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/tred1.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/mini-covector.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/eispack/tred2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/mini-covector.nrrd -Dname=/<>/Testing/Data/Baseline/IO/mini-covector.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ea79a63a85642acf1913cc177cf513ac" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/mini-covector-slow.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/mini-covector-slow.nrrd -Dname=/<>/Testing/Data/Input/mini-covector-slow.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ae372bc45da51776eef4b725b24af9d4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/small-tensors-double.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/small-tensors-double.nrrd -Dname=/<>/Testing/Data/Baseline/IO/small-tensors-double.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ef9ef528bc3a11a2c0fecc63b8380026" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/small-tensors.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/small-tensors.nhdr -Dname=/<>/Testing/Data/Input/small-tensors.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c04e83ada2c3ca6f4f76e6af84d5be4a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/small-tensors.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/small-tensors.raw -Dname=/<>/Testing/Data/Input/small-tensors.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7dec54fb7556bd7c33f9b93877b3325e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/mini-ten-mask.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/eispack/tred2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/eispack/tred2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/mini-ten-mask.nrrd -Dname=/<>/Testing/Data/Input/mini-ten-mask.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/85efcfcdcf432673f9929d573dda05e5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/laso/dlabax.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/mini-ten-nomask-fast.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/mini-ten-nomask-fast.nrrd -Dname=/<>/Testing/Data/Input/mini-ten-nomask-fast.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ed6b1f8c0a6c8f01384a17055d7035df" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/mini-ten-nomask-slow.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/laso/dlabax.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/laso/dlabax.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/laso/dlabcm.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/mini-ten-nomask-slow.nrrd -Dname=/<>/Testing/Data/Input/mini-ten-nomask-slow.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/85fa2d2b574fa40333791e827a65f7c3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVector.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkVector.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/mini-ten.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating ../../itkCovariantVector.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/mini-ten.nrrd -Dname=/<>/Testing/Data/Baseline/IO/mini-ten.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ed6b1f8c0a6c8f01384a17055d7035df" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/small-tensors.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/small-tensors.nhdr -Dname=/<>/Testing/Data/Baseline/IO/small-tensors.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c04e83ada2c3ca6f4f76e6af84d5be4a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/small-tensors.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/small-tensors.raw -Dname=/<>/Testing/Data/Baseline/IO/small-tensors.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7dec54fb7556bd7c33f9b93877b3325e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/NrrdImageReadWriteTest1.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/laso/dlabcm.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/laso/dlabcm.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/NrrdImageReadWriteTest1.nrrd -Dname=/<>/Testing/Data/Baseline/IO/NrrdImageReadWriteTest1.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1b2166bc4fb73ed378be389cd9db544e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/laso/dlabfc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/box.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/box.nhdr -Dname=/<>/Testing/Data/Input/box.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a18180eb28ecdecd77d0a300388883af" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/box.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/box.raw -Dname=/<>/Testing/Data/Input/box.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e58310903b2222da69c4b15d5d81e14e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/vol-ascii.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/vol-ascii.nrrd -Dname=/<>/Testing/Data/Baseline/IO/vol-ascii.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c0a0541593027198a190711be35c9179" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-raw-big.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/laso/dlabfc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/laso/dlabfc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-raw-big.nrrd -Dname=/<>/Testing/Data/Input/vol-raw-big.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f91b10bb47c338503f52648600d8bbd8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/laso/dlaeig.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-raw-little.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-raw-little.nrrd -Dname=/<>/Testing/Data/Input/vol-raw-little.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5a70a1d1378ab622d3b1ddbdc192d648" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-gzip-big.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-gzip-big.nrrd -Dname=/<>/Testing/Data/Input/vol-gzip-big.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3e2dc9fb9f1ed846666ee5ed4410d8b8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/laso/dlaeig.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/laso/dlaeig.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-gzip-little.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/laso/dlager.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-gzip-little.nrrd -Dname=/<>/Testing/Data/Input/vol-gzip-little.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9edda1a4e1a48269da99302f9bc71c6d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-ascii.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-ascii.nhdr -Dname=/<>/Testing/Data/Input/vol-ascii.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/13cbb709a0014b2336f677532cddc69b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-ascii.ascii make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/laso/dlager.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/laso/dlager.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/laso/dlaran.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-ascii.ascii -Dname=/<>/Testing/Data/Input/vol-ascii.ascii -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/dab040ea34b22730529cadd0f64608a7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-raw-big.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-raw-big.nhdr -Dname=/<>/Testing/Data/Input/vol-raw-big.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/eb1dbee5e2e1a72dcef91a6176d03455" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-raw-big.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/laso/dlaran.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/laso/dlaran.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/laso/dmvpc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-raw-big.raw -Dname=/<>/Testing/Data/Input/vol-raw-big.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fc6467097e91d6fa61d5a5832567ca84" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-raw-little.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBoxImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFilterBase.castxml.inc /<>/BUILD/Wrapping/itkBoxImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-raw-little.nhdr -Dname=/<>/Testing/Data/Input/vol-raw-little.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3ae09a7c8cb78b4d21a778783cef18de" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating ../../itkNoiseImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-raw-little.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/laso/dmvpc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/laso/dmvpc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-raw-little.raw -Dname=/<>/Testing/Data/Input/vol-raw-little.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/dd22325405446fd02c4b208b1050b6f2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/laso/dnlaso.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-gzip-big.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-gzip-big.nhdr -Dname=/<>/Testing/Data/Input/vol-gzip-big.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f519120aad7c97d6c4bde32ea503af65" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-gzip-big.raw.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSample.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkSample.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating ../../itkHistogram.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-gzip-big.raw.gz -Dname=/<>/Testing/Data/Input/vol-gzip-big.raw.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/271e0513e054351cbdfbb37ffe381fd2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-gzip-little.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-gzip-little.nhdr -Dname=/<>/Testing/Data/Input/vol-gzip-little.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/466ff11bf81efc5d2183149ec351f7df" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vol-gzip-little.raw.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vol-gzip-little.raw.gz -Dname=/<>/Testing/Data/Input/vol-gzip-little.raw.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7cb98fa8d8f1c41d94f4c4c14e8d5522" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/NrrdRGBAImageReadWriteTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/NrrdRGBAImageReadWriteTest.png -Dname=/<>/Testing/Data/Baseline/IO/NrrdRGBAImageReadWriteTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/85b9cc5c8adcec0a5571fc54633e4a7c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/testrgba.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/testrgba.nrrd -Dname=/<>/Testing/Data/Input/testrgba.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b5c9abd3eb76b8f543524f34d27c66ee" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/NrrdRGBImageReadWriteTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/NrrdRGBImageReadWriteTest0.png -Dname=/<>/Testing/Data/Baseline/IO/NrrdRGBImageReadWriteTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/972c4391bff2d4bfbcd0357abd5b3bfe" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/testrgb-0.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/testrgb-0.nhdr -Dname=/<>/Testing/Data/Input/testrgb-0.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c78b91e2ceadc7f4a69838b66192e343" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/testrgb-0.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/testrgb-0.raw -Dname=/<>/Testing/Data/Input/testrgb-0.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9f8c0afe6a1055af8268f1215dbf4149" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/NrrdRGBImageReadWriteTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/NrrdRGBImageReadWriteTest1.png -Dname=/<>/Testing/Data/Baseline/IO/NrrdRGBImageReadWriteTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/972c4391bff2d4bfbcd0357abd5b3bfe" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/testrgb-1.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/testrgb-1.nhdr -Dname=/<>/Testing/Data/Input/testrgb-1.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d4fdae630324729f763364424f112c12" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/testrgb-1.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/testrgb-1.raw -Dname=/<>/Testing/Data/Input/testrgb-1.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e0638c6de24d97c6d5ea840d3743842a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/NrrdRGBImageReadWriteTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/laso/dnlaso.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/laso/dnlaso.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/NrrdRGBImageReadWriteTest2.png -Dname=/<>/Testing/Data/Baseline/IO/NrrdRGBImageReadWriteTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/972c4391bff2d4bfbcd0357abd5b3bfe" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/laso/dnppla.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/testrgb-2.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/testrgb-2.nhdr -Dname=/<>/Testing/Data/Input/testrgb-2.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bab32126254e022c1674843c1cc35042" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/testrgb-2.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/testrgb-2.raw -Dname=/<>/Testing/Data/Input/testrgb-2.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/13c7390cdb00004ea8a5264248ac5110" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/mini-vector-fast.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/mini-vector-fast.nrrd -Dname=/<>/Testing/Data/Input/mini-vector-fast.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0fdbdd4dce2b63c31a33993c634f5b63" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/mini-vector.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/mini-vector.nrrd -Dname=/<>/Testing/Data/Baseline/IO/mini-vector.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0fdbdd4dce2b63c31a33993c634f5b63" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/mini-vector-slow.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/mini-vector-slow.nrrd -Dname=/<>/Testing/Data/Input/mini-vector-slow.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a13cfcb6ff02f6a38f5d820e8a10737e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/peppers.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCovariantVector.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkCovariantVector.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/peppers.png -Dname=/<>/Testing/Data/Input/peppers.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/95f7501e87cae6d920e8bcd228a32112" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating ../../itkPoint.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/VisibleWomanEyeSlice.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/laso/dnppla.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/laso/dnppla.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/VisibleWomanEyeSlice.png -Dname=/<>/Testing/Data/Input/VisibleWomanEyeSlice.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7f316147601f8b1943ab9d198181b82e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Modules/IO/PNG/test/Input/HeliconiusNumataPalette.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/laso/dortqr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/PNG/test/Input/HeliconiusNumataPalette.png -Dname=/<>/Modules/IO/PNG/test/Input/HeliconiusNumataPalette.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e1a172ea496458c38440dd3599fa16c1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Modules/IO/PNG/test/Baseline/itkPNGImageIOTest2GreyAlpha.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/PNG/test/Baseline/itkPNGImageIOTest2GreyAlpha.png -Dname=/<>/Modules/IO/PNG/test/Baseline/itkPNGImageIOTest2GreyAlpha.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/443e3ba7be782302d647ed5237544bc9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Modules/IO/PNG/test/Input/GrayAlpha.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/laso/dortqr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/laso/dortqr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/PNG/test/Input/GrayAlpha.png -Dname=/<>/Modules/IO/PNG/test/Input/GrayAlpha.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7c4b00e3309cc7d8a4b14f75717b1ebe" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/laso/dvsort.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/VHFColor.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/VHFColor.raw -Dname=/<>/Testing/Data/Input/VHFColor.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c19232232c0f90c3a777e6ae843d9f83" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/SpatialObjects.meta make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCurvatureFlowImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCurvatureFlow.castxml.inc /<>/BUILD/Wrapping/itkCurvatureFlowImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/SpatialObjects.meta -Dname=/<>/Testing/Data/Input/SpatialObjects.meta -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d3c871c5020376e57720d81a9449d310" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating ../../itkMinMaxCurvatureFlowImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Modules/IO/SpatialObjects/test/Input/Branch-truth.tre make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/laso/dvsort.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/laso/dvsort.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/SpatialObjects/test/Input/Branch-truth.tre -Dname=/<>/Modules/IO/SpatialObjects/test/Input/Branch-truth.tre -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/021d040248c95fc262e2ee9c4cc15b19" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/laso/urand.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BigEndian.spr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BigEndian.spr -Dname=/<>/Testing/Data/Input/BigEndian.spr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8ea1771a39e356032dc66fe9a8e392b8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImage.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/laso/urand.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/laso/urand.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgebak.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImage.tif -Dname=/<>/Testing/Data/Baseline/IO/RGBTestImage.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/377e602800c18624d9bc7a32fa706b97" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageCCITTFax3.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageCCITTFax3.tif -Dname=/<>/Testing/Data/Baseline/IO/RGBTestImageCCITTFax3.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f61982917bbcddb7c2629373163293b7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgebak.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgebak.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 8%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageCCITTFax3.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgebal.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageCCITTFax3.tif -Dname=/<>/Testing/Data/Input/RGBTestImageCCITTFax3.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cea8db89b555c8f012665a317c06e962" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageCCITTFax4.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageCCITTFax4.tif -Dname=/<>/Testing/Data/Baseline/IO/RGBTestImageCCITTFax4.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f61982917bbcddb7c2629373163293b7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageCCITTFax4.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgebal.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgebal.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageCCITTFax4.tif -Dname=/<>/Testing/Data/Input/RGBTestImageCCITTFax4.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/913c6fc3dbb91e579289e1ed1c740cd9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgeev.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageGray.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageGray.tif -Dname=/<>/Testing/Data/Baseline/IO/RGBTestImageGray.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ef0fc3dbff662e3831d2942d1b0c3bc5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageGray.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageGray.tif -Dname=/<>/Testing/Data/Input/RGBTestImageGray.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0103d20529b17e1cc1d1187a4b9aae92" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageHuffmanRLE.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgeev.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgeev.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgehd2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageHuffmanRLE.tif -Dname=/<>/Testing/Data/Baseline/IO/RGBTestImageHuffmanRLE.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f61982917bbcddb7c2629373163293b7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageHuffmanRLE.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageHuffmanRLE.tif -Dname=/<>/Testing/Data/Input/RGBTestImageHuffmanRLE.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d70c31cf0bffe2ea0c98e34b6bcd71df" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageJPEG.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCastImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFilterBase.castxml.inc /<>/BUILD/Wrapping/itkCastImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating ../../itkRecursiveSeparableImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageJPEG.tif -Dname=/<>/Testing/Data/Baseline/IO/RGBTestImageJPEG.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c7a07dedfa15d7025e13d4b7e2e3f318" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageJPEG.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgehd2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgehd2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgehrd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageJPEG.tif -Dname=/<>/Testing/Data/Input/RGBTestImageJPEG.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/85fa65acc6210e884fef639b884232fb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageLZW.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageLZW.tif -Dname=/<>/Testing/Data/Baseline/IO/RGBTestImageLZW.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/377e602800c18624d9bc7a32fa706b97" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageNone.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageNone.tif -Dname=/<>/Testing/Data/Baseline/IO/RGBTestImageNone.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/377e602800c18624d9bc7a32fa706b97" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageNone.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgehrd.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgehrd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zhseqr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageNone.tif -Dname=/<>/Testing/Data/Input/RGBTestImageNone.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/df4ef2e9931456eba01bf2e645160681" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImagePackBits.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImagePackBits.tif -Dname=/<>/Testing/Data/Baseline/IO/RGBTestImagePackBits.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/377e602800c18624d9bc7a32fa706b97" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImagePackBits.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImagePackBits.tif -Dname=/<>/Testing/Data/Input/RGBTestImagePackBits.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f1de05e0b287f39e1e0507d73c3fae44" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHistogram.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkHistogram.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageZIP.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating ../../itkListSample.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageZIP.tif -Dname=/<>/Testing/Data/Baseline/IO/RGBTestImageZIP.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/377e602800c18624d9bc7a32fa706b97" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageZIP.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/RGBTestImageZIP.tif -Dname=/<>/Testing/Data/Input/RGBTestImageZIP.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4fa08dbc0e0f6bdbab0c5b25754ccc53" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/ShortTestImage.tiff make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/ShortTestImage.tiff -Dname=/<>/Testing/Data/Baseline/IO/ShortTestImage.tiff -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3b466c3de8dd4ce6f11daeced1e81523" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/ShortTestImage.tiff make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zhseqr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zhseqr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNoiseImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFilterBase.castxml.inc /<>/BUILD/Wrapping/itkNoiseImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/ShortTestImage.tiff -Dname=/<>/Testing/Data/Input/ShortTestImage.tiff -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/11aa67285ef4d1e2106abbdbb2a87a4f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFiniteDifference && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDenseFiniteDifferenceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFiniteDifference.castxml.inc /<>/BUILD/Wrapping/itkDenseFiniteDifferenceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlacgv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating ../../itkVectorCastImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/48BitTestImage.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating ../../itkFiniteDifferenceFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/48BitTestImage.tif -Dname=/<>/Testing/Data/Baseline/IO/48BitTestImage.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d67cde498d5d1b85fd291d34a6863c66" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageCCITTFax3.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageCCITTFax3.mha -Dname=/<>/Testing/Data/Baseline/IO/RGBTestImageCCITTFax3.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ee2904dd715e7608b3c84f1007134b82" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPoint.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkPoint.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageCCITTFax4.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlacgv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlacgv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating ../../itkTriangleHelper.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlacpy.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/RGBTestImageCCITTFax4.mha -Dname=/<>/Testing/Data/Baseline/IO/RGBTestImageCCITTFax4.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ee2904dd715e7608b3c84f1007134b82" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/jello.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/jello.tif -Dname=/<>/Modules/IO/TIFF/test/Input/jello.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8e1eb8f6aa9c72998ff995e860943922" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/ramp.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/ramp.tif -Dname=/<>/Testing/Data/Baseline/IO/ramp.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2a660b9e224164ef6913d867417c27e9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/ramp.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/ramp.tif -Dname=/<>/Testing/Data/Input/ramp.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2a660b9e224164ef6913d867417c27e9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/IO/rampShort.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/IO/rampShort.tif -Dname=/<>/Testing/Data/Baseline/IO/rampShort.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/24151436804e5695f205a76c43a96034" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlacpy.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlacpy.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/rampShort.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 9%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zladiv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/rampShort.tif -Dname=/<>/Testing/Data/Input/rampShort.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/24151436804e5695f205a76c43a96034" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1-multires.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zladiv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zladiv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlahqr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1-multires.tif -Dname=/<>/Testing/Data/Input/cthead1-multires.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6efad5b13c178ae6ce53c3167560c3ce" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/rampFloat.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/rampFloat.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/rampFloat.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7064407d819e8da4254f7074374ebd80" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/itkTIFFImageIORGBATestBaseline.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/itkTIFFImageIORGBATestBaseline.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/itkTIFFImageIORGBATestBaseline.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2519d0ba91de809da2d9b035287586e8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/RGBAHead.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/RGBAHead.tif -Dname=/<>/Modules/IO/TIFF/test/Input/RGBAHead.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5b9b0140b4e82971f91df7687b87174d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/cthead_oriet_tl.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/cthead_oriet_tl.tif -Dname=/<>/Modules/IO/TIFF/test/Input/cthead_oriet_tl.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/82519fd20d95513027ac0b2086374792" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlahqr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlahqr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/cthead_oriet_bl.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlahrd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/cthead_oriet_bl.tif -Dname=/<>/Modules/IO/TIFF/test/Input/cthead_oriet_bl.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/98b3553630736bfd2508258aa9f719cf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/cthead_oriet_br.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/cthead_oriet_br.tif -Dname=/<>/Modules/IO/TIFF/test/Input/cthead_oriet_br.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d58927dd0a801a2bb24933b1270988eb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlahrd.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlahrd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/cthead_oriet_tr.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlange.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/cthead_oriet_tr.tif -Dname=/<>/Modules/IO/TIFF/test/Input/cthead_oriet_tr.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/42db080a06de9a595a864e81868be228" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/oxford.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlange.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlange.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/oxford.tif -Dname=/<>/Modules/IO/TIFF/test/Input/oxford.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3d81d957d4d6c146ec496d2596d3e14a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlanhs.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/ps-separated.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/ps-separated.tif -Dname=/<>/Modules/IO/TIFF/test/Input/ps-separated.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/028e5857ba356da7850830df4ed4c57c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/single-channel.ome.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/single-channel.ome.tif -Dname=/<>/Modules/IO/TIFF/test/Input/single-channel.ome.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2620590a992aca80b5433c0ecfbb9c17" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlanhs.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlanhs.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_NoCompression.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarf.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_NoCompression.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_NoCompression.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/82519fd20d95513027ac0b2086374792" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_LZW.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_LZW.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_LZW.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/15a6a2ab0ca669bdae2b9e77ef5bd6fd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_JPEG.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarf.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlarf.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarfb.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_JPEG.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_JPEG.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/15f732259a2634e7402b0721313697a2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_PackBits.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_PackBits.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_PackBits.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/15a6a2ab0ca669bdae2b9e77ef5bd6fd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_RGBTestImageJPEG_NoCompression.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_RGBTestImageJPEG_NoCompression.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_RGBTestImageJPEG_NoCompression.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9d922e7bb8fc7f3ff75f06c2842c0b10" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_RGBTestImageJPEG_LZW.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_RGBTestImageJPEG_LZW.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_RGBTestImageJPEG_LZW.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7418a437ea38a282d67390027fd9a377" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_RGBTestImageJPEG_JPEG.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_RGBTestImageJPEG_JPEG.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_RGBTestImageJPEG_JPEG.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2d9c457797dedeaea4321824b7479346" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_RGBTestImageJPEG_PackBits.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_RGBTestImageJPEG_PackBits.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_RGBTestImageJPEG_PackBits.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7418a437ea38a282d67390027fd9a377" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_JPEG_1.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_JPEG_1.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_JPEG_1.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/389ce1fd78ebf0dea51ac0e384bd5e65" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_JPEG_50.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_JPEG_50.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_JPEG_50.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/179434aa8a121dbdc2a659ae976135a7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_JPEG_100.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_JPEG_100.tif -Dname=/<>/Modules/IO/TIFF/test/Baseline/TestTIFFCompression_cthead1_JPEG_100.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1f543bfff34ffca4c2d753482acc5dd9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/HeliconiusNumataPalette.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarfb.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlarfb.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TIFF/test/Input/HeliconiusNumataPalette.tif -Dname=/<>/Modules/IO/TIFF/test/Input/HeliconiusNumataPalette.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6ef991e5101c1c01fc22efce30b0547d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/TransformInsightLegacy/test/Input/euler3DOldFormat.tfm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarfg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/TransformInsightLegacy/test/Input/euler3DOldFormat.tfm -Dname=/<>/Modules/IO/TransformInsightLegacy/test/Input/euler3DOldFormat.tfm -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/29469c3fbf3328d149fee08294b32df1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/VHFColor.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/VHFColor.mhd -Dname=/<>/Testing/Data/Input/VHFColor.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a875a9101247d4be7f322a656f44b925" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/VTK/test/Input/matrix.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarfg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlarfg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/VTK/test/Input/matrix.vtk -Dname=/<>/Modules/IO/VTK/test/Input/matrix.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/896dc6012fb0e62e692fbf9fb856d4ef" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarft.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/IO/VTK/test/Input/ironProt.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/IO/VTK/test/Input/ironProt.vtk -Dname=/<>/Modules/IO/VTK/test/Input/ironProt.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3e2b46c6e2ddd6880dbfbfe5219f5771" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/XML/test.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/XML/test.xml -Dname=/<>/Testing/Data/Input/XML/test.xml -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/552e70bd6f60de341e95060945c856a7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/XML/test.pso.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/XML/test.pso.xml -Dname=/<>/Testing/Data/Input/XML/test.pso.xml -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cfa96d0f89a8c36707a921103d140f4c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/STAPLEImageFilterTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarft.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlarft.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/STAPLEImageFilterTest.mha -Dname=/<>/Testing/Data/Baseline/Algorithms/STAPLEImageFilterTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1f304023bcc62a5368c0400a2b17abd8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarfx.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/STAPLE1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/STAPLE1.png -Dname=/<>/Testing/Data/Input/STAPLE1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e4e709ab8d28bf2c6cc0a544cd04c0d4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/STAPLE2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/STAPLE2.png -Dname=/<>/Testing/Data/Input/STAPLE2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a40c7a15e7f48c29bf17e13e96d7f93b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/STAPLE3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/STAPLE3.png -Dname=/<>/Testing/Data/Input/STAPLE3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/deec604744cf6cd485c438b96db1e614" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkListSample.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkListSample.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/STAPLE4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating ../../itkMembershipFunctionBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/STAPLE4.png -Dname=/<>/Testing/Data/Input/STAPLE4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5cbc209bd07a767a35df7b9732041d18" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageCompare/test/Input/itkTestingComparisonImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTriangleHelper.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkTriangleHelper.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMinMaxCurvatureFlowImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCurvatureFlow.castxml.inc /<>/BUILD/Wrapping/itkMinMaxCurvatureFlowImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating ../../itkVariableSizeMatrix.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageCompare/test/Input/itkTestingComparisonImageFilterTest.png -Dname=/<>/Modules/Filtering/ImageCompare/test/Input/itkTestingComparisonImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e1eb82fc56d169728fb0c35545ffc1cc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating ../../itkBinaryMinMaxCurvatureFlowImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cake_hard.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRecursiveSeparableImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFilterBase.castxml.inc /<>/BUILD/Wrapping/itkRecursiveSeparableImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cake_hard.png -Dname=/<>/Testing/Data/Input/cake_hard.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/83ea568329f9cd79671975edc5025eec" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating ../../itkVersor.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ImageToVectorImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ImageToVectorImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ImageToVectorImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/52bacd705be1e75940cbf5cece6d5d6c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Spots.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Spots.png -Dname=/<>/Testing/Data/Input/Spots.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c590896716ea62c3f47ef14e1b19fafc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/SpotsInverted.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/SpotsInverted.png -Dname=/<>/Testing/Data/Input/SpotsInverted.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c6992bf279626c33374cdf57673caaea" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Number1inText.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Number1inText.png -Dname=/<>/Testing/Data/Input/Number1inText.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2238a41e9a7d0396857431020fabe737" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Number2inText.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Number2inText.png -Dname=/<>/Testing/Data/Input/Number2inText.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fb58700e01b8f9cdec1f5127f6c7e4c5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Number3inText.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Number3inText.png -Dname=/<>/Testing/Data/Input/Number3inText.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5c4b3debcee0d0245f2b7ffdf2aacfa8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/IntensityRamp64.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/IntensityRamp64.png -Dname=/<>/Testing/Data/Input/IntensityRamp64.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/499347d3b0da5b177ca65ce04742c1bc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Baseline/SwirledUSM_Defaults.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Baseline/SwirledUSM_Defaults.png -Dname=/<>/Modules/Filtering/ImageFeature/test/Baseline/SwirledUSM_Defaults.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b951855e328bc5023343e64244b11e6d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Input/Swirled.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarfx.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlarfx.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Input/Swirled.png -Dname=/<>/Modules/Filtering/ImageFeature/test/Input/Swirled.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9523e9b0b71db4463af4c3f2a635e860" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlascl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Baseline/SwirledUSM_Defaults.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Baseline/SwirledUSM_Defaults.nrrd -Dname=/<>/Modules/Filtering/ImageFeature/test/Baseline/SwirledUSM_Defaults.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9aed0276d910f5dddaacbe71229854ab" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Baseline/SwirledUSM_3-3-15.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Baseline/SwirledUSM_3-3-15.nrrd -Dname=/<>/Modules/Filtering/ImageFeature/test/Baseline/SwirledUSM_3-3-15.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cada0ba837400a1f7d0427921ebd1728" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkHessianToObjectnessMeasureImageFilterTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkHessianToObjectnessMeasureImageFilterTest.mha -Dname=/<>/Testing/Data/Baseline/Filtering/itkHessianToObjectnessMeasureImageFilterTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/40c95795843d6a036769786b154329e3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/DSA.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/DSA.png -Dname=/<>/Testing/Data/Input/DSA.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/02e576585b1d28ad4d016129be2aa224" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkHessianToObjectnessMeasureImageFilterTest2.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkHessianToObjectnessMeasureImageFilterTest2.mha -Dname=/<>/Testing/Data/Baseline/Filtering/itkHessianToObjectnessMeasureImageFilterTest2.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8cc0bc4f769074e53bd1379a730b8df5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkCannyEdgeDetectionImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkCannyEdgeDetectionImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkCannyEdgeDetectionImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3560288a2c9d85e6ac9c6ec52c5c198b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/BilateralImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlascl.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlascl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlaset.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/BilateralImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/BilateralImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/24939ab4a1aa667c85e1481669ec01cf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/BilateralImageFilterTest3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/BilateralImageFilterTest3.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/BilateralImageFilterTest3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b631979de837698731c9037556f594a3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/SimpleContourExtractorImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/SimpleContourExtractorImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/SimpleContourExtractorImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/32d3cbd031060256f694af752fc201df" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/BinaryThresholdImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlaset.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlaset.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlassq.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/BinaryThresholdImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/BinaryThresholdImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/40022a98d249e2929ed52bf3b238956d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDerivativeImageFilterTest1x.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlassq.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlassq.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDerivativeImageFilterTest1x.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkDerivativeImageFilterTest1x.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/88a2004c3db13c89ff2a9f8ae3403c3c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlatrs.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDerivativeImageFilterTest1y.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDerivativeImageFilterTest1y.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkDerivativeImageFilterTest1y.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c1bac073c887d71ee0236190f38546ee" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDerivativeImageFilterTest2x.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFiniteDifference && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFiniteDifferenceFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFiniteDifference.castxml.inc /<>/BUILD/Wrapping/itkFiniteDifferenceFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating ../../itkFiniteDifferenceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDerivativeImageFilterTest2x.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkDerivativeImageFilterTest2x.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d6d9528a0e4ea67f3394e82b2b766c17" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDerivativeImageFilterTest2y.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkDerivativeImageFilterTest2y.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkDerivativeImageFilterTest2y.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c84ddb8f1a8e3aae7db4fd026308cd62" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/LaplacianRecursiveGaussianImageFilterTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/LaplacianRecursiveGaussianImageFilterTest.1.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/LaplacianRecursiveGaussianImageFilterTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7bc543e8702bd00cea6bfc8bc5c2b614" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/LaplacianRecursiveGaussianImageFilterTest.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/LaplacianRecursiveGaussianImageFilterTest.2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/LaplacianRecursiveGaussianImageFilterTest.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/83883dd2cee08ad4a544dc6a4039123f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/LaplacianRecursiveGaussianImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMembershipFunctionBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkMembershipFunctionBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating ../../itkDistanceMetric.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/LaplacianRecursiveGaussianImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/LaplacianRecursiveGaussianImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6e200741d6bbfed0ed586a08cfdd1132" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Baseline/itkMaskFeaturePointSelectionFilterTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlatrs.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlatrs.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Baseline/itkMaskFeaturePointSelectionFilterTest.mha -Dname=/<>/Modules/Filtering/ImageFeature/test/Baseline/itkMaskFeaturePointSelectionFilterTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/691856a8fc01d4606cd0875fb2c354cf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztrevc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Baseline/itkGradientVectorFlowImageFilterPythonTestX.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Baseline/itkGradientVectorFlowImageFilterPythonTestX.png -Dname=/<>/Modules/Filtering/ImageFeature/test/Baseline/itkGradientVectorFlowImageFilterPythonTestX.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5ca422fcd3f3618d4a9e7360e554325f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Baseline/itkGradientVectorFlowImageFilterPythonTestY.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Baseline/itkGradientVectorFlowImageFilterPythonTestY.png -Dname=/<>/Modules/Filtering/ImageFeature/test/Baseline/itkGradientVectorFlowImageFilterPythonTestY.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8d3356914a762c4d114e408f6618fcb4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVariableSizeMatrix.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkVariableSizeMatrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating ../../stdcomplex.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Input/Contours.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFeature/test/Input/Contours.png -Dname=/<>/Modules/Filtering/ImageFeature/test/Input/Contours.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/32ea7efea4d76c713ada2d8d3cf884a0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/MaskNeighborhoodOperatorImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/MaskNeighborhoodOperatorImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/MaskNeighborhoodOperatorImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7b9c3ac6e40c7c300caedb4c275b3df6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_0Overlay.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztrevc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/ztrevc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVersor.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkVersor.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_0Overlay.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_0Overlay.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d427cd657b9061e85f71ea627b41250b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zung2r.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1Label.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating ../../vnl_c_vector.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1Label.png -Dname=/<>/Testing/Data/Input/cthead1Label.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/438a214680fa78e79451afa29ab5883b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_1Overlay.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zung2r.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zung2r.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_1Overlay.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_1Overlay.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/007603baa7aed28d8040164d93502443" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_2Overlay.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zunghr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_2Overlay.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_2Overlay.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/655a558436c789d4f1b53a0aedcd05a3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_3Overlay.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_3Overlay.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_3Overlay.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/00bd97f6008825bab8e117837777e9fe" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_4Overlay.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_4Overlay.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_4Overlay.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9c379aae1d975566397b8114c6713810" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_5Overlay.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zunghr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zunghr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_5Overlay.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_5Overlay.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/376e36cb111a6b60e14e71bd72bfa877" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_6Overlay.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zungqr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_6Overlay.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_6Overlay.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a0abf5ec6c451983b407f049e2d91f51" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_7Overlay.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_7Overlay.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_7Overlay.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9cc6cdc42baba1ba55a4ab5cc3cd4119" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_8Overlay.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_8Overlay.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_8Overlay.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/00d9bbe450140a8b30f02950dd00dea2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_9Overlay.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_9Overlay.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/cthead1-0_9Overlay.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a035b726e50a912b3f863d7c09ca1945" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-1_0Overlay.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zungqr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zungqr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgsyl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1-1_0Overlay.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/cthead1-1_0Overlay.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/98590caaaa3eb6d96442bcf57834b81a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1Label-color.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/cthead1Label-color.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/cthead1Label-color.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5a5a9d0a583e155b6fb1df813f254ae4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapToRGBImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapToRGBImageFilterTest1.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapToRGBImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/15469d4edb675c1f137d75577d8ae097" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorCastImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFilterBase.castxml.inc /<>/BUILD/Wrapping/itkVectorCastImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/SpotsLabeled.png make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 10%] Built target ITKImageFilterBaseCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformCastXML.dir/build.make Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Transform/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKTransform /<>/BUILD/Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTransformCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformCastXML.dir/build.make Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformCastXML.dir/build make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/SpotsLabeled.png -Dname=/<>/Testing/Data/Input/SpotsLabeled.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/730e1231a896164fca6b08f84cbc7059" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapContourOverlayImageFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating ../../itkCompositeTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapContourOverlayImageFilterTest0.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapContourOverlayImageFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e3008dd7b6826e182ca70f8c26aa96a7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapContourOverlayImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapContourOverlayImageFilterTest1.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapContourOverlayImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/541560fe389993cf6861d1dabba93438" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapContourOverlayImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapContourOverlayImageFilterTest2.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapContourOverlayImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0b28d3fad7c9d7971474559c69a4b694" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgsyl.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/ztgsyl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapContourOverlayImageFilterTest4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zrot.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapContourOverlayImageFilterTest4.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapContourOverlayImageFilterTest4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cb7354847f66a141ee3af5919f1eb390" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapOverlayImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapOverlayImageFilterTest1.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapOverlayImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/59e0b80d79af96556c3c9c228a318d8e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapOverlayImageFilterTest3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapOverlayImageFilterTest3.png -Dname=/<>/Modules/Filtering/ImageFusion/test/Baseline/itkLabelMapOverlayImageFilterTest3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/33782762ecdf16e6429553682b94e069" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GradientMagnitudeImageFilterTest2.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zrot.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zrot.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlatdf.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GradientMagnitudeImageFilterTest2.mha -Dname=/<>/Testing/Data/Baseline/Filtering/GradientMagnitudeImageFilterTest2.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/961c4a8758d2c64091db6fe7c63d3f35" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorGradientMagnitudeImageFilterTest1a.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorGradientMagnitudeImageFilterTest1a.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/VectorGradientMagnitudeImageFilterTest1a.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/51dc28a3711106aa513504d37c7d40cf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorGradientMagnitudeImageFilterTest1b.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorGradientMagnitudeImageFilterTest1b.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/VectorGradientMagnitudeImageFilterTest1b.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0d13add9c170e8d02a57a6a7cc85d2b5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorGradientMagnitudeImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorGradientMagnitudeImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/VectorGradientMagnitudeImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e3ab55ebfd623898e4fb338124071f59" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorGradientMagnitudeImageFilterTest2b.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlatdf.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlatdf.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorGradientMagnitudeImageFilterTest2b.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/VectorGradientMagnitudeImageFilterTest2b.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d32358f8e726b66bb71e9f55989023bb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageGradient/test/Baseline/itkGradientRecursiveGaussianFilterTest3c.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlacn2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDistanceMetric.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkDistanceMetric.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageGradient/test/Baseline/itkGradientRecursiveGaussianFilterTest3c.nii.gz -Dname=/<>/Modules/Filtering/ImageGradient/test/Baseline/itkGradientRecursiveGaussianFilterTest3c.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/55592e333079fc6be1f1b77f161d8898" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating ../../itkEuclideanDistanceMetric.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 10%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageGradient/test/Baseline/itkGradientRecursiveGaussianFilterTest4.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageGradient/test/Baseline/itkGradientRecursiveGaussianFilterTest4.mha -Dname=/<>/Modules/Filtering/ImageGradient/test/Baseline/itkGradientRecursiveGaussianFilterTest4.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3a0c2dcce8acf040303b6f9666f1ce97" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/itkBSplineScatteredDataPointSetToImageFilterTest01.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlacn2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlacn2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryMinMaxCurvatureFlowImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCurvatureFlow.castxml.inc /<>/BUILD/Wrapping/itkBinaryMinMaxCurvatureFlowImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgsy2.c.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 11%] Built target ITKCurvatureFlowCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionCastXML.dir/build.make Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/itkBSplineScatteredDataPointSetToImageFilterTest01.mha -Dname=/<>/Modules/Filtering/ImageGrid/test/Baseline/itkBSplineScatteredDataPointSetToImageFilterTest01.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a207cf3cb08a968a52fe127ce1068160" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/ImageFunction/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageFunction /<>/BUILD/Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFunctionCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionCastXML.dir/build.make Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../itkImageFunctionBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BSplineScatteredApproximationDataPointsInput.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BSplineScatteredApproximationDataPointsInput.txt -Dname=/<>/Testing/Data/Input/BSplineScatteredApproximationDataPointsInput.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5957c1cd824b64c15c72ad404fddb43e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/N4ControlPoints_2D.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/N4ControlPoints_2D.nii.gz -Dname=/<>/Modules/Filtering/ImageGrid/test/Baseline/N4ControlPoints_2D.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/42e2bcd3a0a81581882ab44af460d1ad" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/N4ControlPoints_3D.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/N4ControlPoints_3D.nii.gz -Dname=/<>/Modules/Filtering/ImageGrid/test/Baseline/N4ControlPoints_3D.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/44bea90b8916831082462c59da0143a9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/TileImageFilterTest4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgsy2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/ztgsy2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/TileImageFilterTest4.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/TileImageFilterTest4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9c36b7e127479188c81f5e03c6e2b210" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgexc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/VisibleWomanEyeSliceInitialLevelSet.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/VisibleWomanEyeSliceInitialLevelSet.png -Dname=/<>/Testing/Data/Input/VisibleWomanEyeSliceInitialLevelSet.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7fdd5c98c8288fbbae92ca08357a2fb0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/smooth_circle.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/smooth_circle.png -Dname=/<>/Testing/Data/Input/smooth_circle.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6f37a2cff1719aa609fcb2b6689de815" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/smooth_square.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/smooth_square.png -Dname=/<>/Testing/Data/Input/smooth_square.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ef3b275158fc1297618381818648796f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/PasteImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/stdcomplex.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/stdcomplex.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgexc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/ztgexc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../vnl_cost_function.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zggbak.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_c_vector.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_c_vector.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/PasteImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/PasteImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3e0d6b14075fc50de52f67c4b9f205e6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../vnl_diag_matrix.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorResampleImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorResampleImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/VectorResampleImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/52de5c91a0a08b964e4fc9a9bef1965d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ResampleImageTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ResampleImageTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ResampleImageTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f6a561da7047ce3dd2fc2fc3f352ba93" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest2NearestExtrapolate.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zggbak.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zggbak.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgetc2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest2NearestExtrapolate.png -Dname=/<>/Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest2NearestExtrapolate.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7e72999c85522d2701194ab5fa2124d1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest3.png -Dname=/<>/Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5e693f3b8ea2a0a6aa66adfad3f17185" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest5.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgetc2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgetc2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest5.png -Dname=/<>/Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest5.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/13cd69b2cbc6980d0ce7abba66c7fa0d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest6.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zhgeqz.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest6.png -Dname=/<>/Modules/Filtering/ImageGrid/test/Baseline/ResampleImageTest6.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1ac3b5cad012a3d3cc41638494ccbb8c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/PushPopTileImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/PushPopTileImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/PushPopTileImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5574416e3bfa026efb5ba9cb488c4e29" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkVectorIndexSelectionCastImageFilterTest1.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkVectorIndexSelectionCastImageFilterTest1.mha -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkVectorIndexSelectionCastImageFilterTest1.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/998269ab74069be1f2fe7d24e01fb33a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkVectorIndexSelectionCastImageFilterTest2.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkVectorIndexSelectionCastImageFilterTest2.mha -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkVectorIndexSelectionCastImageFilterTest2.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2a6e7fc9cfa4cdf71a36675a86ae8da8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkVectorIndexSelectionCastImageFilterTest3.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkVectorIndexSelectionCastImageFilterTest3.mha -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkVectorIndexSelectionCastImageFilterTest3.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/67d709c91df48ddc0613781130fa934e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/InvertIntensityImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/InvertIntensityImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/InvertIntensityImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/92a3ffd25c7ef39199cd121a32efccd4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/MatrixIndexSelectionImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/MatrixIndexSelectionImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/MatrixIndexSelectionImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5b4f3d09caa5938a236c7ece4b65af46" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageIntensity/test/Baseline/PolylineMaskImageFilterTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageIntensity/test/Baseline/PolylineMaskImageFilterTest.mha -Dname=/<>/Modules/Filtering/ImageIntensity/test/Baseline/PolylineMaskImageFilterTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4d1bf340242b30c428f2cb96811e7053" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/PromoteDimensionImageTest.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/PromoteDimensionImageTest.mhd -Dname=/<>/Testing/Data/Baseline/BasicFilters/PromoteDimensionImageTest.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/03f2f6889900e8310c8530541a26a7f6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/PromoteDimensionImageTest.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/PromoteDimensionImageTest.raw -Dname=/<>/Testing/Data/Baseline/BasicFilters/PromoteDimensionImageTest.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ab47c11a47671f2a68ab257a4920c0c3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ModulusImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ModulusImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ModulusImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b5808940cd997da4192a3f4cb631fdcc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zhgeqz.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zhgeqz.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageIntensity/test/Baseline/itkMagnitudeAndPhaseToComplexImageFilterTestBaseline.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgges.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageIntensity/test/Baseline/itkMagnitudeAndPhaseToComplexImageFilterTestBaseline.mha -Dname=/<>/Modules/Filtering/ImageIntensity/test/Baseline/itkMagnitudeAndPhaseToComplexImageFilterTestBaseline.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2187c77ca3dfdc6f9d32431db82de8a6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageIntensity/test/Input/itkBrainSliceComplexMagnitude.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageIntensity/test/Input/itkBrainSliceComplexMagnitude.mha -Dname=/<>/Modules/Filtering/ImageIntensity/test/Input/itkBrainSliceComplexMagnitude.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b80449e3d5f29fbcbcde2bdbe955827d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageIntensity/test/Input/itkBrainSliceComplexPhase.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageIntensity/test/Input/itkBrainSliceComplexPhase.mha -Dname=/<>/Modules/Filtering/ImageIntensity/test/Input/itkBrainSliceComplexPhase.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/21bff0c167143af4e0f2a3262d96a893" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageLabel/test/Baseline/itkLabelContourImageFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageLabel/test/Baseline/itkLabelContourImageFilterTest0.png -Dname=/<>/Modules/Filtering/ImageLabel/test/Baseline/itkLabelContourImageFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2f4dd51016528b985e8b2e89761f90a5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageLabel/test/Baseline/itkLabelContourImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgges.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgges.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlaswp.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageLabel/test/Baseline/itkLabelContourImageFilterTest1.png -Dname=/<>/Modules/Filtering/ImageLabel/test/Baseline/itkLabelContourImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fb9a986148f0a44997189a53fa909c94" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageLabel/test/Baseline/itkBinaryContourImageFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageLabel/test/Baseline/itkBinaryContourImageFilterTest0.png -Dname=/<>/Modules/Filtering/ImageLabel/test/Baseline/itkBinaryContourImageFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/67a4c04d327f598aa1ba24109f4d61dd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageLabel/test/Baseline/itkBinaryContourImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlaswp.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlaswp.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zdrscl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageLabel/test/Baseline/itkBinaryContourImageFilterTest1.png -Dname=/<>/Modules/Filtering/ImageLabel/test/Baseline/itkBinaryContourImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c9f37b7ca6d565e58b8f95dba48a9c2f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GaborImageSourceTest0.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GaborImageSourceTest0.mha -Dname=/<>/Testing/Data/Baseline/Filtering/GaborImageSourceTest0.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e387604fad353cfa075209ad9f90fe40" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GaborImageSourceTest1.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zdrscl.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zdrscl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlartg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GaborImageSourceTest1.mha -Dname=/<>/Testing/Data/Baseline/Filtering/GaborImageSourceTest1.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/183146d07d50a26b3d460b3044c7e11e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCompositeTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkCompositeTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest1.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../itkTransformBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest1.nhdr -Dname=/<>/Testing/Data/Baseline/Filtering/itkGridImageSourceTest1.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8832135be4366c78ef501d4674913a7f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest1.raw.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlartg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zlartg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zggbal.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest1.raw.gz -Dname=/<>/Testing/Data/Baseline/Filtering/itkGridImageSourceTest1.raw.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0ceeb06facd7d98425db67d3cc2872cf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest2.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest2.nhdr -Dname=/<>/Testing/Data/Baseline/Filtering/itkGridImageSourceTest2.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b7c5830ff49a5b2e2ed53171c7323fdb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkEuclideanDistanceMetric.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkEuclideanDistanceMetric.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest2.raw.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../itkHistogramToEntropyImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest2.raw.gz -Dname=/<>/Testing/Data/Baseline/Filtering/itkGridImageSourceTest2.raw.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a5048a128d0fa5d806c250c2e8e71708" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest3.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest3.nhdr -Dname=/<>/Testing/Data/Baseline/Filtering/itkGridImageSourceTest3.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/daa3027168223a763783da10d1aee52e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest3.raw.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFiniteDifference && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFiniteDifferenceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFiniteDifference.castxml.inc /<>/BUILD/Wrapping/itkFiniteDifferenceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 11%] Built target ITKFiniteDifferenceCastXML make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest3.raw.gz -Dname=/<>/Testing/Data/Baseline/Filtering/itkGridImageSourceTest3.raw.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ba26a727a59b3ca05ece72a350f4c849" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest4.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../itkHistogramToIntensityImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zggbal.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zggbal.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest4.nhdr -Dname=/<>/Testing/Data/Baseline/Filtering/itkGridImageSourceTest4.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/74eeef7094965b83f46e9a37db6b5691" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest4.raw.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgeqr2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkGridImageSourceTest4.raw.gz -Dname=/<>/Testing/Data/Baseline/Filtering/itkGridImageSourceTest4.raw.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/20d2006419ad1b6d6b796006ea45d215" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkPhysicalPointImageSourceTest0.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkPhysicalPointImageSourceTest0.mha -Dname=/<>/Testing/Data/Baseline/Filtering/itkPhysicalPointImageSourceTest0.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/068d59f530fb4af1bcbf423846bc519b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkPhysicalPointImageSourceTest2.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgeqr2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgeqr2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkPhysicalPointImageSourceTest2.mha -Dname=/<>/Testing/Data/Baseline/Filtering/itkPhysicalPointImageSourceTest2.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/43961e97a386068ceacc8105669dbcad" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgecon.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkPhysicalPointImageSourceTest4.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkPhysicalPointImageSourceTest4.nrrd -Dname=/<>/Testing/Data/Baseline/Filtering/itkPhysicalPointImageSourceTest4.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d9e96802eaa0762041b5058736fb38ff" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/OtsuMultipleThresholdsImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgecon.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgecon.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/OtsuMultipleThresholdsImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/Algorithms/OtsuMultipleThresholdsImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d735ab3a3a35b44c8360fced6b6649b2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageFunctionBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFunction.castxml.inc /<>/BUILD/Wrapping/itkImageFunctionBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zunmqr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../itkBSplineDecompositionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeSumProjection.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeSumProjection.tif -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeSumProjection.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a2aeabe2d860519d551fee1c2208e6ee" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_cost_function.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_cost_function.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../vnl_file_matrix.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeStandardDeviationProjection.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeStandardDeviationProjection.tif -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeStandardDeviationProjection.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/133e9ae8117175e1c13916f7ba9bb1d9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection0.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zunmqr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zunmqr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zunm2r.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection0.mha -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection0.mha -Dexts=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d72eb9ebf4a60f6cfeaf60717d1926be" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_diag_matrix.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_diag_matrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../vnl_file_vector.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection1.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection1.mha -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection1.mha -Dexts=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c04f31b19f308ea44c8897963d50ce54" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection2D0.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection2D0.mha -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection2D0.mha -Dexts=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a9975b1c719c166e2a6680b0478e74af" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection2D1.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zunm2r.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zunm2r.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgeqrf.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection2D1.tif -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection2D1.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5ca62eb3942ad84577335a37ded42cce" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMinimumProjection.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMinimumProjection.tif -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMinimumProjection.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/815661c09054fa7724282a252617061f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMeanProjection.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMeanProjection.tif -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMeanProjection.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/70d4f0f78345be57a0bbfe32b26ab57f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgeqrf.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgeqrf.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgex2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection.tif -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMaximumProjection.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2e715e7a363d7a5ea9af4165f71b455c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMedianProjection.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMedianProjection.tif -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeMedianProjection.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/87ac20d6bc6602ee3781ed93691f418a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/AccumulateImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgex2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/ztgex2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgesc2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/AccumulateImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/AccumulateImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8cf5082628fa7b03770cebd8b79ecf1c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/AdaptiveHistogramEqualizationImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/AdaptiveHistogramEqualizationImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/AdaptiveHistogramEqualizationImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3af35d5042784dc8aeccff98a0aa20f9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/AdaptiveHistogramEqualizationImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgesc2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgesc2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgsen.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/AdaptiveHistogramEqualizationImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/AdaptiveHistogramEqualizationImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0346bd5836650401ef53a7481e9bdaba" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeBinaryProjection100.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeBinaryProjection100.tif -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeBinaryProjection100.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/082be88d8710fed65c2b130b6e3561aa" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeBinaryProjection200.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeBinaryProjection200.tif -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeBinaryProjection200.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9f4a282b42dac8e37668c03c8d81e915" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageStatistics/test/Input/sourceImage.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageStatistics/test/Input/sourceImage.nii.gz -Dname=/<>/Modules/Filtering/ImageStatistics/test/Input/sourceImage.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/38755611bfc82b195f1bf8b35ef6311c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/ImageStatistics/test/Input/targetImage.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/ImageStatistics/test/Input/targetImage.nii.gz -Dname=/<>/Modules/Filtering/ImageStatistics/test/Input/targetImage.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ab17b39bc3aef093e42c066a342673c4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgsen.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/ztgsen.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-labelAggregate.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgghrd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-labelAggregate.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-labelAggregate.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8a08f49a26694e59cdff61890e5582d7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeKeepNObjectsLabelMapFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeKeepNObjectsLabelMapFilterTest0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkAttributeKeepNObjectsLabelMapFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/642e5ef173190ea5249c60583c9ac749" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeKeepNObjectsLabelMapFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeKeepNObjectsLabelMapFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkAttributeKeepNObjectsLabelMapFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b9f6cad2546158a50b5abcd1866749c7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeOpeningLabelMapFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgghrd.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgghrd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgees.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeOpeningLabelMapFilterTest0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkAttributeOpeningLabelMapFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/642e5ef173190ea5249c60583c9ac749" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeOpeningLabelMapFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeOpeningLabelMapFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkAttributeOpeningLabelMapFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e1583b48b914650c985df7ca1fdbb814" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributePositionLabelMapFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributePositionLabelMapFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkAttributePositionLabelMapFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ce09a113267298c09c4a4cbabec09ca3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgees.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/zgees.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTransformBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkTransformBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztrexc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeRelabelLabelMapFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../itkMatrixOffsetTransformBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeRelabelLabelMapFilterTest0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkAttributeRelabelLabelMapFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b8b8ea73a22c24de4993d488e008dea1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeRelabelLabelMapFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeRelabelLabelMapFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkAttributeRelabelLabelMapFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5bb266e5dc7f734dfe094aae1ba46892" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeUniqueLabelMapFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeUniqueLabelMapFilterTest0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkAttributeUniqueLabelMapFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3fe8082e8196035cfa6363866e3f127d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeUniqueLabelMapFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAttributeUniqueLabelMapFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkAttributeUniqueLabelMapFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2853dadae8aea2f1f70a2c1e90480674" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztrexc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/ztrexc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-autocrop.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztrsen.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-autocrop.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-autocrop.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/42a1101129d3dba905e2e8878bbaa581" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryFillholeImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryFillholeImageFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkBinaryFillholeImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/82e9a7c7f5ef883ee983573637ffa740" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryGrindPeakImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryGrindPeakImageFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkBinaryGrindPeakImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8e098613aeefccd3695cdff8ece820c7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_file_matrix.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_file_matrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztrsen.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/ztrsen.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryGrindPeakImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztrsyl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dgecon.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryGrindPeakImageFilterTest2.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkBinaryGrindPeakImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b5fe50c2b6f66f0182681d2e2347b8b8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-labeled.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-labeled.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-labeled.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4788960a3ecbbe7b0095833fd1578e6a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1-mask.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgecon.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dgecon.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dgeqr2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1-mask.png -Dname=/<>/Testing/Data/Input/cthead1-mask.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/838b1ef1d9c87efb724b18dd9e328922" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/connected0lines-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/connected0lines-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/connected0lines-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/34fccd065a46bba0747ae455f67ac9e7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/connected0lines.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgeqr2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dgeqr2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/connected0lines.png -Dname=/<>/Testing/Data/Input/connected0lines.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d5da2f7d910d1ad7ef44ff9dc281c2fb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dgeqrf.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/connected0lines-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztrsyl.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/complex16/ztrsyl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dgerq2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/connected0lines-1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/connected0lines-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5f8dff7723a929f94874d80793eb87a8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/289.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_file_vector.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_file_vector.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../vnl_fortran_copy.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/289.png -Dname=/<>/Testing/Data/Input/289.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b54410a9c8765c909c0ebf60a90d3fad" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgeqrf.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dgeqrf.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/nonConnected3DLines-0.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dgesc2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgerq2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dgerq2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/nonConnected3DLines-0.tif -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/nonConnected3DLines-0.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3992277117944a4aa5bb5f3ffbdb4610" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../vnl_least_squares_function.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/nonConnected3DLines.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/nonConnected3DLines.tif -Dname=/<>/Testing/Data/Input/nonConnected3DLines.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a6980aac00696043726ec927c82ae2a2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/BinaryImage1Row.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgesc2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dgesc2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHistogramToIntensityImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkHistogramToIntensityImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/BinaryImage1Row.bmp -Dname=/<>/Testing/Data/Input/BinaryImage1Row.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2dbf30ae6e983b7150e3e7caddd95975" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dgetc2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/Spots-binaryimage-to-shapelabel.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../itkHistogramToLogProbabilityImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/Spots-binaryimage-to-shapelabel.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/Spots-binaryimage-to-shapelabel.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ab02a5f1da920895618054a840286d22" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/Spots-binaryimage-to-statisticslabel.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/Spots-binaryimage-to-statisticslabel.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/Spots-binaryimage-to-statisticslabel.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/746774554014c44c0deb88cf03f7c3f6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryReconstructionByDilationImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgetc2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dgetc2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dggbak.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryReconstructionByDilationImageFilterTest.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkBinaryReconstructionByDilationImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cb465b80053c03ee4e9a47545961300c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Spots-markers.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHistogramToEntropyImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkHistogramToEntropyImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Spots-markers.png -Dname=/<>/Testing/Data/Input/Spots-markers.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/255058df7a2e4f137e57468727df5e5c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../itkHistogramToProbabilityImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryReconstructionByErosionImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBSplineDecompositionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFunction.castxml.inc /<>/BUILD/Wrapping/itkBSplineDecompositionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dggbak.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dggbak.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating ../../itkBSplineInterpolateImageFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryReconstructionByErosionImageFilterTest.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkBinaryReconstructionByErosionImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1b795a76fb3d1cec6e2dec5f8706a641" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dggbal.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryReconstructionLabelMapFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryReconstructionLabelMapFilterTest.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkBinaryReconstructionLabelMapFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/411ad942bbefa31d0fe63f25bfc40c4d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1-markers.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1-markers.png -Dname=/<>/Testing/Data/Input/cthead1-markers.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/91758486f0f0fe1be69215994b33462a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/binary-image-various-shapes01-binary-shape-keep-n-objects.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/binary-image-various-shapes01-binary-shape-keep-n-objects.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/binary-image-various-shapes01-binary-shape-keep-n-objects.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d57cfdaed90ed5c2b635e7883a68798a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 11%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-binary-shape-opening.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-binary-shape-opening.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-binary-shape-opening.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e2c49918182a26e3186ec10c9a34d447" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryStatisticsKeepNObjectsImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkBinaryStatisticsKeepNObjectsImageFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkBinaryStatisticsKeepNObjectsImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/80f6db5190c5f4a0be7e104194d156ca" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-statistics-object-removed-baseline.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-statistics-object-removed-baseline.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-statistics-object-removed-baseline.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a9daff737be97625fa848aec30ed522a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Input/cthead1-bin.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Input/cthead1-bin.png -Dname=/<>/Modules/Filtering/LabelMap/test/Input/cthead1-bin.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fa8abbd3abf4be60ab7e7ef3aff07226" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dggbal.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dggbal.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Input/cthead1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dgges.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Input/cthead1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Input/cthead1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e395391caad7463c8231bd5f2ce9d61b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-changed.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-changed.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-changed.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/745200e0c6bf72ce98630898b9e6deac" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-changed2.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-changed2.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-changed2.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ef3baca7d0261c8966ba8294ca722c87" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-changed3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-changed3.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-changed3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/710070dd654566e0dbc03551ea0570a8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-changeregion.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-changeregion.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-changeregion.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bbd3adf46b1629a6a96edb6cabe0da44" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-crop.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgges.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dgges.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMatrixOffsetTransformBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkMatrixOffsetTransformBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dgghrd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-crop.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-crop.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/610789c53d760221c48f8d5024280f39" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating ../../itkEuler2DTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/simple-label-to-shapelabelmap.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/simple-label-to-shapelabelmap.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/simple-label-to-shapelabelmap.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/366c29f5ff82dbe682257cd40da4c58a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/simple-label-b.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/simple-label-b.png -Dname=/<>/Testing/Data/Input/simple-label-b.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9a43c71d2189f77a4bb05bd7c7cfed6d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-0-0-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-0-0-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-0-0-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e0545ab36ed6477842a29ea5ae818c04" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-0-0-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-0-0-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-0-0-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e0545ab36ed6477842a29ea5ae818c04" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgghrd.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dgghrd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-0-0-10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dhgeqz.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-0-0-10.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-0-0-10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e0545ab36ed6477842a29ea5ae818c04" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-0-0-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-0-0-1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-0-0-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/95149aa42cfdcc0c69e3c2910eb1436f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_least_squares_function.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_least_squares_function.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-0-1-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating ../../vnl_matrix_fixed.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-0-1-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-0-1-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/99c76b0e0f0b5388114b7d8136549698" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-0-1-10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-0-1-10.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-0-1-10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bfed641b98e54de5ce007c14c1063149" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-0-1-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-0-1-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-0-1-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/87c7fc812ce0f777072512964a6b17c6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-1-0-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-1-0-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-1-0-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/87c7fc812ce0f777072512964a6b17c6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-1-0-10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-1-0-10.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-1-0-10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/87c7fc812ce0f777072512964a6b17c6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-0-1-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-0-1-1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-0-1-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/419d0d4bbd400e6bdebf187a971a804a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-1-1-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_fortran_copy.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_fortran_copy.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating ../../vnl_matrix_fixed_ref.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-1-1-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-1-1-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8220de49de2eefc8d495ad71381acbde" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-1-1-10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-1-1-10.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-0-1-1-10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c238f529353176f664beb0f739dfbbdf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-100-0-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-100-0-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-100-0-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6c7677f22e44a8ebbb3cb91decd8e678" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-0-0-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-0-0-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-0-0-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/df6d928c3ebf45243e10c030cdf67aea" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-0-0-10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-0-0-10.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-0-0-10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/70fefa524f8fe3773b47b045918bb580" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-100-0-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-100-0-1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-100-0-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d0a39297d2662941ac4a4dde42404d3f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-0-1-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-0-1-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-0-1-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d0a39297d2662941ac4a4dde42404d3f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-0-1-10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-0-1-10.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-0-1-10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d0a39297d2662941ac4a4dde42404d3f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-100-1-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-100-1-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-100-1-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b1a654963177f748c76c3159071ac44a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dhgeqz.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dhgeqz.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-1-0-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlabad.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-1-0-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-1-0-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f0315e215f03cf8e12764276bd0b78cd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-1-0-10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-1-0-10.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-1-0-10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cd4177af624329c4e84e8b8d2b0ef6c0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-100-1-1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlabad.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlabad.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkEuler2DTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkEuler2DTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-100-1-1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTest-100-1-1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/27f49f69e38afc3bd67f08f7c5a2c9f3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-1-1-0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlacon.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating ../../itkEuler3DTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-1-1-0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-1-1-0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/27f49f69e38afc3bd67f08f7c5a2c9f3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-1-1-10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-1-1-10.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapMaskImageFilterTestCrop-100-1-1-10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/27f49f69e38afc3bd67f08f7c5a2c9f3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapToAttributeImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapToAttributeImageFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelMapToAttributeImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/33891689cde761fd23fd82c8733c363c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-binary.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlacon.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlacon.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlacpy.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-binary.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-binary.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/de5b1a42cd759024d039e5b56a325748" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelSelectionLabelMapFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelSelectionLabelMapFilterTest0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelSelectionLabelMapFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/063a71f9c261330044d853e1ccbcd255" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelSelectionLabelMapFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelSelectionLabelMapFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelSelectionLabelMapFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9e8f154fbbf3786043c19485c550377b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelShapeKeepNObjectsImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelShapeKeepNObjectsImageFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelShapeKeepNObjectsImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/59e0402354c6d9f7e50b6420510c5e4c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-shape-open-baseline.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlacpy.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlacpy.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dladiv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-shape-open-baseline.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-shape-open-baseline.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c02b4c374d74ed0dd98886732a395765" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-statistics-keep-NObjects-baseline.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dladiv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dladiv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlaev2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-statistics-keep-NObjects-baseline.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-statistics-keep-NObjects-baseline.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3e7b4a86fd626f18ed62f77e266f1953" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-opening-baseline.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-opening-baseline.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-opening-baseline.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/935c3b46e64e0c09511d0d69e6a43c02" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelUniqueLabelMapFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlaev2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlaev2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelUniqueLabelMapFilterTest0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelUniqueLabelMapFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1e67e58e635efcde7c574c7bc1c0eccf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_matrix_fixed.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_matrix_fixed.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelUniqueLabelMapFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlag2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlagv2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkLabelUniqueLabelMapFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkLabelUniqueLabelMapFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6b7c03fa7e55310db3c2365447df2230" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/simple-label-merge-keep.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHistogramToLogProbabilityImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkHistogramToLogProbabilityImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHistogramToProbabilityImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkHistogramToProbabilityImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/simple-label-merge-keep.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/simple-label-merge-keep.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2981a2acd77b19bc44fc4dcdb97cd773" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating ../../itkHistogramToRunLengthFeaturesFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating ../../itkHistogramToTextureFeaturesFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/simple-label-c.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlag2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlag2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlagv2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlagv2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlange.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlanhs.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/simple-label-c.png -Dname=/<>/Testing/Data/Input/simple-label-c.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8cf11dfc620a0a371b66d78062ef29e4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/simple-label-d.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/simple-label-d.png -Dname=/<>/Testing/Data/Input/simple-label-d.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/000361a85ff53cec8df5e6f00fcb3454" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/simple-label-merge-aggregate.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/simple-label-merge-aggregate.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/simple-label-merge-aggregate.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a0766143ff6235269981475691ceab2a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlanhs.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlanhs.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlapy2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/simple-label-merge-pack.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlange.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlange.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlapy3.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/simple-label-merge-pack.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/simple-label-merge-pack.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/37ce2c0ad4f47e24c2eb59a94d8e3894" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/simple-label-merge-strict.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/simple-label-merge-strict.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/simple-label-merge-strict.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2f658d85fd0d941faf461e1e7ee9becc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlapy3.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlapy3.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/simple-label-e.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlapy2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlapy2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarf.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarfb.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/simple-label-e.png -Dname=/<>/Testing/Data/Input/simple-label-e.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b7743c4f31a61164c2c88a55b6e82059" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkObjectByObjectLabelMapFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_matrix_fixed_ref.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_matrix_fixed_ref.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkObjectByObjectLabelMapFilterTest0.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkObjectByObjectLabelMapFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6b7394115f459662ba877346558be6b2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkObjectByObjectLabelMapFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating ../../vnl_matrix_ref.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBSplineInterpolateImageFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFunction.castxml.inc /<>/BUILD/Wrapping/itkBSplineInterpolateImageFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating ../../itkBSplineResampleImageFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarf.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlarf.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkObjectByObjectLabelMapFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkObjectByObjectLabelMapFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e7275af72e3381393407f6025d0e58d8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarfg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-pad.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-pad.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-pad.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3479844a804bee8a3c2624b030925500" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-regionreference.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-regionreference.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-regionreference.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c552d7ea44194402c15a6cdc82956a8e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarfg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlarfg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-relabeled.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarft.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-relabeled.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-relabeled.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7a4da8eafc86ea136cfbf916fad610b1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-keep-n-objects.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-keep-n-objects.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-keep-n-objects.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/543e4b96513dec1f742733d00cee5f18" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-shape-opening.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-shape-opening.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-shape-opening.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/543e4b96513dec1f742733d00cee5f18" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarft.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlarft.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkShapePositionLabelMapFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlartg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkShapePositionLabelMapFilterTest1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkShapePositionLabelMapFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ff704fced958516f70174fbe44d3e3d0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-shape-relabel-labelmap.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-shape-relabel-labelmap.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-shape-relabel-labelmap.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7a4da8eafc86ea136cfbf916fad610b1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlartg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlartg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-shape-unique-labelmap.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-shape-unique-labelmap.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-shape-unique-labelmap.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/369355894730f8227556e3c113d3d66e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlascl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-shiftscaled.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-shiftscaled.mha -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-label-shiftscaled.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/079d0f66208c6c20c5e2c6c332f4f271" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-shape-relabel-baseline.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-shape-relabel-baseline.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-shape-relabel-baseline.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4cca5a2494fc2d091a5bf61bd0ac9215" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-statistics-relabel_image-baseline.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1-statistics-relabel_image-baseline.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1-statistics-relabel_image-baseline.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/06a341452a50f143dd2f313ed3955ce9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarfb.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlarfb.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Input/cthead1Label.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlaset.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Input/cthead1Label.png -Dname=/<>/Modules/Filtering/LabelMap/test/Input/cthead1Label.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/438a214680fa78e79451afa29ab5883b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAutoCropLabelMapFilterTest2-92.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAutoCropLabelMapFilterTest2-92.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkAutoCropLabelMapFilterTest2-92.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ddc19735ecba9e1d761954c3c7a6e838" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAutoCropLabelMapFilterTest2-163.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlascl.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlascl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlaset.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlaset.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlasv2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlassq.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/itkAutoCropLabelMapFilterTest2-163.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/itkAutoCropLabelMapFilterTest2-163.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1e23ee28e0485d315daa814efa025fe2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-unique-labelmap-baseline1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkEuler3DTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkEuler3DTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-unique-labelmap-baseline1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-unique-labelmap-baseline1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/be307e32a4e92aebe2d073e2045584eb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlasv2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlasv2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating ../../itkMultiTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlaswp.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-unique-labelmap-dilate-baseline1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlassq.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlassq.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-unique-labelmap-dilate-baseline1.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-unique-labelmap-dilate-baseline1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d316376f88e2bf224fdf0371b5c319b7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlatdf.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-unique-labelmap-baseline2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-unique-labelmap-baseline2.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-unique-labelmap-baseline2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c02a486efd940c5ec462f345f5864067" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-unique-labelmap-dilate-baseline2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlaswp.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlaswp.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-unique-labelmap-dilate-baseline2.png -Dname=/<>/Modules/Filtering/LabelMap/test/Baseline/cthead1Label-label-statistics-unique-labelmap-dilate-baseline2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d316376f88e2bf224fdf0371b5c319b7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlatrs.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VectorThresholdSegmentationLevelSetImageFilterTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VectorThresholdSegmentationLevelSetImageFilterTest.1.png -Dname=/<>/Testing/Data/Baseline/Algorithms/VectorThresholdSegmentationLevelSetImageFilterTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e711b23215a244b0d10fa93c760ca383" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlatdf.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlatdf.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VectorThresholdSegmentationLevelSetImageFilterTest.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dorg2r.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VectorThresholdSegmentationLevelSetImageFilterTest.2.png -Dname=/<>/Testing/Data/Baseline/Algorithms/VectorThresholdSegmentationLevelSetImageFilterTest.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9c994c3f8257a3858c6c07ae79902830" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VectorThresholdSegmentationLevelSetImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VectorThresholdSegmentationLevelSetImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/Algorithms/VectorThresholdSegmentationLevelSetImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6e5a1467e934c113fd94fa8515df7c78" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ParallelSparseFieldLevelSetImageFilterTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dorg2r.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dorg2r.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dorgqr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ParallelSparseFieldLevelSetImageFilterTest.mha -Dname=/<>/Testing/Data/Baseline/BasicFilters/ParallelSparseFieldLevelSetImageFilterTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e2287b89675d8e20f51f00499863beaf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/itkNarrowBandCurvesLevelSetImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlatrs.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlatrs.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dorgr2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/itkNarrowBandCurvesLevelSetImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/Algorithms/itkNarrowBandCurvesLevelSetImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d8e1b8b4eafa505d72dd4b353fdf1399" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_dense_single.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_dense_single.mha -Dname=/<>/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_dense_single.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b6c3deae8b310a072bb13e764334f753" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dorgqr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dorgqr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/whiteSpot.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dorm2r.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/whiteSpot.png -Dname=/<>/Testing/Data/Input/whiteSpot.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9f16f488712c428b16c9937e099ebdc0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dorgr2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dorgr2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_sparse_single.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dormqr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_sparse_single.mha -Dname=/<>/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_sparse_single.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ae2a9713954c15a59dff71218dafee7f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dorm2r.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dorm2r.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_malcolm_single.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dormr2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_matrix_ref.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_matrix_ref.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dormqr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dormqr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_malcolm_single.mha -Dname=/<>/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_malcolm_single.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3e5bbf480f3ff2b70331bcb15639670e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/drscl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating ../../vnl_vector_ref.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_shi_single.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_shi_single.mha -Dname=/<>/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_shi_single.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8aafa14412a37fef456a7f9a59d271d1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_sparse_two.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dormr2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dormr2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/drscl.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/drscl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_sparse_two.mha -Dname=/<>/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_sparse_two.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1a1fa346d32d2cf90386991b6f2435f0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dsptrf.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dsptrs.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_malcolm_two.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_malcolm_two.mha -Dname=/<>/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_malcolm_two.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7665397f59eaeb65c578e8712be70e79" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_shi_two.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_shi_two.mha -Dname=/<>/Modules/Segmentation/LevelSetsv4/test/Baseline/solution_whiteSpot_output_shi_two.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3e0179a1b0879b8d3a557558b498309c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHistogramToTextureFeaturesFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkHistogramToTextureFeaturesFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dsptrs.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dsptrs.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ClosingByReconstructionImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 12%] Generating ../../itkImageToHistogramFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dspr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ClosingByReconstructionImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ClosingByReconstructionImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/948cd12655c933bf61dcca0bcb34534b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/closerec1.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dsptrf.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dsptrf.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/closerec1.jpg -Dname=/<>/Testing/Data/Input/closerec1.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b2235a2ac43c516ea2d818168139aa6b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgex2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ClosingByReconstructionImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ClosingByReconstructionImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ClosingByReconstructionImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5fd321b9d4b32d348c7de85844c37339" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Generating /<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/FlatStructuringElementImageTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dspr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dspr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/FlatStructuringElementImageTest.png -Dname=/<>/Modules/Filtering/MathematicalMorphology/test/Baseline/FlatStructuringElementImageTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cceb337fae649bd9e0a358f2ce17d49a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgexc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleConnectedClosingImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHistogramToRunLengthFeaturesFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkHistogramToRunLengthFeaturesFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleConnectedClosingImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/GrayscaleConnectedClosingImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8dcc2c6af6d2e027aade573ed1b13857" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleConnectedClosingImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Generating ../../itkKdTree.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleConnectedClosingImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/GrayscaleConnectedClosingImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ffdc214723b2db3f6ea16bd8818cc518" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgex2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dtgex2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleConnectedOpeningImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgsen.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleConnectedOpeningImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/GrayscaleConnectedOpeningImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/024a2a32eaac14c7758ed883e0e2a10e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleConnectedOpeningImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgexc.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dtgexc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgsy2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleConnectedOpeningImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/GrayscaleConnectedOpeningImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/44ddc125398ccf8934e27ffb1479afde" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleFillholeImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleFillholeImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/GrayscaleFillholeImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/93a51df089db6b232e3dad8cc15aa3a6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkGrayscaleFunctionDilateImageFilterTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkGrayscaleFunctionDilateImageFilterTest.mha -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkGrayscaleFunctionDilateImageFilterTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2fe10dd10da7e5236b0ecfe1ef91f627" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkGrayscaleFunctionErodeImageFilterTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgsen.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dtgsen.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkGrayscaleFunctionErodeImageFilterTest.mha -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkGrayscaleFunctionErodeImageFilterTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9e2bb31f7dfb7508c6c800922cd3c55e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 13%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgsyl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleMorphologicalClosingImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleMorphologicalClosingImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/GrayscaleMorphologicalClosingImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5cb8f4ab1c8b0aef72cd6e5a8cec0cea" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleMorphologicalOpeningImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/GrayscaleMorphologicalOpeningImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/GrayscaleMorphologicalOpeningImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0950a9d3b5ac37e037c1bfddc7bb85a2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HMaximaMinimaImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HMaximaMinimaImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/HMaximaMinimaImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/23f8b55045289add6ef2275272c209ef" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Input-RA-Short.nrrd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Input-RA-Short.nrrd -Dname=/<>/Testing/Data/Input/Input-RA-Short.nrrd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5a9cdc76f66bb911460cb99f14955a6f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HConvexConcaveImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HConvexConcaveImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/HConvexConcaveImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/576d66bec657d3958bbdc51e0b256c4c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HMaximaMinimaImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HMaximaMinimaImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/HMaximaMinimaImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0fc7409d66f7ee77050916a06be4d08f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgsy2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dtgsy2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/MorphologicalGradientImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlae2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/MorphologicalGradientImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/MorphologicalGradientImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b8e9523d24abda6306a03694a5c001fd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/OpeningByReconstructionImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgsyl.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dtgsyl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/OpeningByReconstructionImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/OpeningByReconstructionImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/39152654de036f6ef7364dafc198bee2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlae2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlae2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/chondt.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarnv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlanst.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/chondt.png -Dname=/<>/Testing/Data/Input/chondt.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8be8424024707a4534868be0d707db49" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/OpeningByReconstructionImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/OpeningByReconstructionImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/OpeningByReconstructionImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cc15422a74db164b6789b10d0f82d810" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/OpeningByReconstructionImageFilterTestNoInput.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarnv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlarnv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlaruv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/OpeningByReconstructionImageFilterTestNoInput.png -Dname=/<>/Modules/Filtering/MathematicalMorphology/test/Baseline/OpeningByReconstructionImageFilterTestNoInput.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/986024dc35957780046c497c91e93c4a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlanst.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlanst.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/OpeningByReconstructionImageFilterTestNoInput2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlasr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/OpeningByReconstructionImageFilterTestNoInput2.png -Dname=/<>/Modules/Filtering/MathematicalMorphology/test/Baseline/OpeningByReconstructionImageFilterTestNoInput2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/986024dc35957780046c497c91e93c4a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/DoubleThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlaruv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlaruv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/DoubleThresholdImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/DoubleThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3afeec20f380b07fc1d23d1081caf6f6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMultiTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkMultiTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/DoubleThresholdImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dlasrt.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating ../../itkVersorTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/DoubleThresholdImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/DoubleThresholdImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fadab3c587bff60adb6ce8fa0bc1552e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/RemoveBoundaryObjectsTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/RemoveBoundaryObjectsTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/RemoveBoundaryObjectsTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1deaf295ebaac91412e8db5ce2f4cd8c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/RemoveBoundaryObjectsTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_vector_ref.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_vector_ref.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating ../../vnl_matrix.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/RemoveBoundaryObjectsTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/RemoveBoundaryObjectsTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/770f608efe92aaafb59eec50ab31eb62" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBlackTopHatImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlasrt.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlasrt.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkBlackTopHatImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkBlackTopHatImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c99b5ceb534138097b53f973f69d6d35" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dsteqr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkWhiteTopHatImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlasr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dlasr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/double/dzsum1.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/itkWhiteTopHatImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/itkWhiteTopHatImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/670a106156311fcc09f706b3b242c83a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1RegionalMinimal-ref1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1RegionalMinimal-ref1.png -Dname=/<>/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1RegionalMinimal-ref1.png -Dexts=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cdb29f5e0f611e48fe2166f5f38a5758" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1RegionalMinimal-ref2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dzsum1.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dzsum1.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/sgeqpf.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1RegionalMinimal-ref2.png -Dname=/<>/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1RegionalMinimal-ref2.png -Dexts=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1c5fd15673eb07b0556fb06b5ee8ec32" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1RegionalMaximal-ref1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1RegionalMaximal-ref1.png -Dname=/<>/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1RegionalMaximal-ref1.png -Dexts=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cdb29f5e0f611e48fe2166f5f38a5758" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1RegionalMaximal-ref2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1RegionalMaximal-ref2.png -Dname=/<>/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1RegionalMaximal-ref2.png -Dexts=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1c5fd15673eb07b0556fb06b5ee8ec32" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1ValuedRegionalMaximal-ref.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/double/dsteqr.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/double/dsteqr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/sgeqpf.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/sgeqpf.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1ValuedRegionalMaximal-ref.png -Dname=/<>/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1ValuedRegionalMaximal-ref.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2d515c7ad9d91cb55d072c8d4285c2e0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/sgeqr2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/sgerq2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1ValuedRegionalMaximal-ref2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1ValuedRegionalMaximal-ref2.png -Dname=/<>/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1ValuedRegionalMaximal-ref2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bc7eec2bf510a5086a30b5a4568dd3f1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1ValuedRegionalMinimal-ref.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBSplineResampleImageFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFunction.castxml.inc /<>/BUILD/Wrapping/itkBSplineResampleImageFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating ../../itkInterpolateImageFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1ValuedRegionalMinimal-ref.png -Dname=/<>/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1ValuedRegionalMinimal-ref.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3afc42f2fd4b2e5b9155a69ef5af7bba" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/sgeqr2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/sgeqr2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/sggsvd.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1ValuedRegionalMinimal-ref2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/sgerq2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/sgerq2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1ValuedRegionalMinimal-ref2.png -Dname=/<>/Modules/Filtering/MathematicalMorphology/test/Baseline/cthead1ValuedRegionalMinimal-ref2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c2b1c15e7b53f0c49bdc983ab0179a79" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/sggsvp.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/genusZeroSurface01.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/genusZeroSurface01.vtk -Dname=/<>/Testing/Data/Input/genusZeroSurface01.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/dfeef4c2100efb21a59c5c3581e19764" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/sphereBinary.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/sggsvd.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/sggsvd.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/sphereBinary.vtk -Dname=/<>/Testing/Data/Input/sphereBinary.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d1189e7a864f0803272a177d0e8e0af3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slacpy.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad0.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad0.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad0.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d5c2737eba945359de5e60e133a57f4d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad1.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad1.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad1.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/68c1bc865cd8edff3f389fa1556261de" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad2.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/sggsvp.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/sggsvp.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad2.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad2.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/516e645cf9a6d0340a9971e307363ea4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad3.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating ../../itkLinearInterpolateImageFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad3.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad3.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e65b9e214ce8e23e7e9268ace430adbf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad4.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad4.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad4.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/61d5b23dbbe67e1462bc0b48bbaf25fe" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad5.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad5.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad5.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/208b36a99e01a209474fa2a497ddfb4a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad6.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slacpy.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slacpy.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slags2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad6.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad6.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ea61f559604bf0ac184bce3cdeca82e1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad7.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad7.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad7.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/efc84bc0a428df509fd36be600b1f67a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad8.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad8.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad8.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4ed4f0902c18beb018b86d85689dbd35" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad9.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkKdTree.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkKdTree.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad9.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad9.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4f70388114a65ff3c970827290c3fc53" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating ../../itkMaskedImageToHistogramFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad10.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad10.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad10.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/af9e7c809e22b64ca954acc565d846a2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slags2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slags2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slange.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad11.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad11.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad11.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/088e709aa11ec1d49d50bb8fe9304cdf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad12.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad12.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad12.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/76eab45118128fcc65d346158faf270d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad13.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad13.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad13.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/42323925f88c94d8cde77c18aff0656f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slange.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slange.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad14.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slapll.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad14.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad14.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b730080225576426640da81b60bfa9d5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad15.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad15.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad15.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6780c0a86f5074d534a45ed37cfca305" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slapll.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slapll.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad16.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slapmt.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad16.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad16.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/29a58e10c5360a2401b86ea1abcfdfeb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad17.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/vtkPolyDataBad17.vtk -Dname=/<>/Testing/Data/Input/vtkPolyDataBad17.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/547546dd57cc38f6465add45a8a4d01c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/metamesh.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVersorTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkVersorTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/metamesh.txt -Dname=/<>/Testing/Data/Input/metamesh.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/36782da5c9428e06e058b6094586965d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slapmt.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slapmt.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating ../../itkVersorRigid3DTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Baseline/face_avg.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slapy2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Baseline/face_avg.jpg -Dname=/<>/Modules/Registration/Metricsv4/test/Baseline/face_avg.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ca48b01b9d940c4b858f1167a7c792a6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Input/face_b.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Input/face_b.jpg -Dname=/<>/Modules/Registration/Metricsv4/test/Input/face_b.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7f715117f473f18078d27a581ed90beb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/r16slice.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slapy2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slapy2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_matrix.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_matrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slarf.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/r16slice.nii.gz -Dname=/<>/Testing/Data/Input/r16slice.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1312946f75782c8491fcea7543713f70" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating ../../vnl_vector.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/r64slice.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/r64slice.nii.gz -Dname=/<>/Testing/Data/Input/r64slice.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/eb963b2a95cb868d67c05095bf33bf50" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Baseline/itkDemonsImageToImageMetricv4RegistrationTest_I35_S0_T1_F0.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slarf.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slarf.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slarfg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Baseline/itkDemonsImageToImageMetricv4RegistrationTest_I35_S0_T1_F0.nii.gz -Dname=/<>/Modules/Registration/Metricsv4/test/Baseline/itkDemonsImageToImageMetricv4RegistrationTest_I35_S0_T1_F0.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d62221200799dab79dcca3e68e580e75" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Baseline/itkDemonsImageToImageMetricv4RegistrationTest_I35_S1_T1_F0.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Baseline/itkDemonsImageToImageMetricv4RegistrationTest_I35_S1_T1_F0.nii.gz -Dname=/<>/Modules/Registration/Metricsv4/test/Baseline/itkDemonsImageToImageMetricv4RegistrationTest_I35_S1_T1_F0.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/778be46642f038cd0da0663c120d7526" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Baseline/itkDemonsImageToImageMetricv4RegistrationTest_I35_S0_T1_F1.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slarfg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slarfg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slartg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Baseline/itkDemonsImageToImageMetricv4RegistrationTest_I35_S0_T1_F1.nii.gz -Dname=/<>/Modules/Registration/Metricsv4/test/Baseline/itkDemonsImageToImageMetricv4RegistrationTest_I35_S0_T1_F1.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/066cefe4f33b391ce1996296331b3b44" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Baseline/itkMeanSquaresImageToImageMetricv4VectorRegistrationTest.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Baseline/itkMeanSquaresImageToImageMetricv4VectorRegistrationTest.nii.gz -Dname=/<>/Modules/Registration/Metricsv4/test/Baseline/itkMeanSquaresImageToImageMetricv4VectorRegistrationTest.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d60d5092d022ed88bdb57404260540e7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Input/orange.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slartg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slartg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slas2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Input/orange.jpg -Dname=/<>/Modules/Registration/Metricsv4/test/Input/orange.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a525df3547b11d2f3e95baeffc90dae6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Input/apple.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/Metricsv4/test/Input/apple.jpg -Dname=/<>/Modules/Registration/Metricsv4/test/Input/apple.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e3f3979ab316042f0e348f77f725b9ba" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/NeuralNetworks/train.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slas2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slas2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slaset.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/NeuralNetworks/train.txt -Dname=/<>/Testing/Data/Input/NeuralNetworks/train.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/08117898c71e366f522ba96f041e3184" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/NeuralNetworks/test.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/NeuralNetworks/test.txt -Dname=/<>/Testing/Data/Input/NeuralNetworks/test.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/61d344269d7cf32baa826ec965024adf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/NeuralNetworks/rbf_multivar_gauss_train.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/NeuralNetworks/rbf_multivar_gauss_train.txt -Dname=/<>/Testing/Data/Input/NeuralNetworks/rbf_multivar_gauss_train.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/46a0441bd361214f70f220da26c29c19" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/NeuralNetworks/rbf_multivar_gauss_test.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/NeuralNetworks/rbf_multivar_gauss_test.txt -Dname=/<>/Testing/Data/Input/NeuralNetworks/rbf_multivar_gauss_test.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c7660824ded33a5a8a3f9ebf765c3c01" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/NeuralNetworks/qpropxortest.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/NeuralNetworks/qpropxortest.txt -Dname=/<>/Testing/Data/Input/NeuralNetworks/qpropxortest.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6b71a9896d9fec63b8b9ac5678ebae9f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slaset.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slaset.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/NeuralNetworks/xortest.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slassq.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/NeuralNetworks/xortest.txt -Dname=/<>/Testing/Data/Input/NeuralNetworks/xortest.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c7c8cf39686a526bf6977f31f13fb58a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/itkMultiResolutionPDEDeformableRegistrationTestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slassq.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slassq.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/itkMultiResolutionPDEDeformableRegistrationTestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Algorithms/itkMultiResolutionPDEDeformableRegistrationTestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ebf123e67401ec93877298d6ef53909e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/slasv2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Path/test/Baseline/ExtractOrthogonalSwath2DImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Path/test/Baseline/ExtractOrthogonalSwath2DImageFilterTest.png -Dname=/<>/Modules/Filtering/Path/test/Baseline/ExtractOrthogonalSwath2DImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/75bd9e825bbd568d513e5b66b97cdf39" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/mushroom.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/mushroom.vtk -Dname=/<>/Testing/Data/Input/mushroom.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3fb4091f253ea27a405dedf3d616a904" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/slasv2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/slasv2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/tetrahedron.vtk make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/sorg2r.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/tetrahedron.vtk -Dname=/<>/Testing/Data/Input/tetrahedron.vtk -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/40292e82ab903a1ead4d15a081d93a99" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/NeighborhoodConnectedImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/NeighborhoodConnectedImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/NeighborhoodConnectedImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2e5b33a2bbbc0ce0ab99ed8064fd785b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/IsolatedConnectedImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/IsolatedConnectedImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/IsolatedConnectedImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b4a5b13a16d4070521a403e8c7d46647" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/IsolatedConnectedImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/sorg2r.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/sorg2r.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/IsolatedConnectedImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/IsolatedConnectedImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/24efb92c83099d380e7e676a79f1857e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/sorm2r.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConfidenceConnectedImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConfidenceConnectedImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ConfidenceConnectedImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ee19982026ecfa739484a682f746eae5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorConfidenceConnectedImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkInterpolateImageFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFunction.castxml.inc /<>/BUILD/Wrapping/itkInterpolateImageFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating ../../itkSimilarity2DTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/VectorConfidenceConnectedImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/VectorConfidenceConnectedImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0c35692c0120bf1ba6a6488424238c4f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/sorm2r.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/sorm2r.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/sormr2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedThresholdImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ConnectedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/acc8f1c50f1cc9ef3ffc2b887fed139d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedThresholdImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/ConnectedThresholdImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/ConnectedThresholdImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4c88193a5afcfc0f300bad7a8c7beddf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLinearInterpolateImageFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFunction.castxml.inc /<>/BUILD/Wrapping/itkLinearInterpolateImageFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/8ConnectedImage.bmp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating ../../itkNearestNeighborInterpolateImageFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/8ConnectedImage.bmp -Dname=/<>/Testing/Data/Input/8ConnectedImage.bmp -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/36e1a6823043f4fa88c666ae970627c2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/sormr2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/sormr2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/Common/test/Baseline/itkBlockMatchingImageFilterTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/single/stgsja.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/Common/test/Baseline/itkBlockMatchingImageFilterTest.mha -Dname=/<>/Modules/Registration/Common/test/Baseline/itkBlockMatchingImageFilterTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/01536c59de811c9b09386aee1471b83a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/RegistrationMethodsv4/test/Baseline/itkSimpleImageRegistrationTest.1.nii make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVersorRigid3DTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkVersorRigid3DTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/RegistrationMethodsv4/test/Baseline/itkSimpleImageRegistrationTest.1.nii -Dname=/<>/Modules/Registration/RegistrationMethodsv4/test/Baseline/itkSimpleImageRegistrationTest.1.nii -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b104e5d09bc87388ac99d0683d145445" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/RegistrationMethodsv4/test/Baseline/itkSimpleImageRegistrationTest.nii make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating ../../itkSimilarity3DTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/RegistrationMethodsv4/test/Baseline/itkSimpleImageRegistrationTest.nii -Dname=/<>/Modules/Registration/RegistrationMethodsv4/test/Baseline/itkSimpleImageRegistrationTest.nii -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2665389ad4889b6e46484769392ab666" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/RegistrationMethodsv4/test/Input/r16slice_rigid.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/RegistrationMethodsv4/test/Input/r16slice_rigid.nii.gz -Dname=/<>/Modules/Registration/RegistrationMethodsv4/test/Input/r16slice_rigid.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3095bb8a7a1932477a96b1439d4b15bd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/RegistrationMethodsv4/test/Input/r64slice.nii.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_vector.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_vector.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/RegistrationMethodsv4/test/Input/r64slice.nii.gz -Dname=/<>/Modules/Registration/RegistrationMethodsv4/test/Input/r64slice.nii.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8a629ee7ea32013c76af5b05f880b5c6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating ../../vnl_unary_function.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/RegistrationMethodsv4/test/Input/Blob1.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/single/stgsja.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/single/stgsja.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/util/ieeeck.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/RegistrationMethodsv4/test/Input/Blob1.mha -Dname=/<>/Modules/Registration/RegistrationMethodsv4/test/Input/Blob1.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c3fd37e22388c7fb41ebe77603dfb46f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Modules/Registration/RegistrationMethodsv4/test/Input/Blob2.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Registration/RegistrationMethodsv4/test/Input/Blob2.mha -Dname=/<>/Modules/Registration/RegistrationMethodsv4/test/Input/Blob2.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bae4fe5dafb3d866635bf057c63a7440" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkAreaClosingImageFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/util/ieeeck.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/util/ieeeck.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkAreaClosingImageFilterTest0.png -Dname=/<>/Testing/Data/Baseline/Review/itkAreaClosingImageFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0e400caf4a2cc65d266e833c0c13c00d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/util/ilaenv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkAreaOpeningImageFilterTest0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkAreaOpeningImageFilterTest0.png -Dname=/<>/Testing/Data/Baseline/Review/itkAreaOpeningImageFilterTest0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/30b9282e2f13ed74db835a87b5f267d9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/ContourExtractor2DTest.tif make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/ContourExtractor2DTest.tif -Dname=/<>/Testing/Data/Input/ContourExtractor2DTest.tif -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/34eb591e670bbf98abbc2828d6e2fcd9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/reconstruct.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/util/ilaenv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/util/ilaenv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/reconstruct.mha -Dname=/<>/Testing/Data/Baseline/Review/reconstruct.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d96cc34b4504a7c1ea6eb333063c7ccf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/util/izmax1.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/sinogram-small.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/sinogram-small.mha -Dname=/<>/Testing/Data/Input/sinogram-small.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/326f69d65c1fdf8b30da593525174e60" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/util/izmax1.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/util/izmax1.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest01.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/lapack/util/lsame.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest01.png -Dname=/<>/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest01.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e2c71cb0d95f64b7a6c46801cccf8a98" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest10.png -Dname=/<>/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0c8bb83b3e7d77e1cf99a2b71d5b3d82" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/lapack/util/lsame.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/lapack/util/lsame.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest11.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/napack/cg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest11.png -Dname=/<>/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest11.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/08afb8c5d416a871b5989e0a47ab6c03" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest20.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest20.png -Dname=/<>/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest20.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c774eb5afb4448dea9b33b9abfe1948f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest02.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest02.png -Dname=/<>/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest02.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/50c5d992ddd79a1101ee18b8f089cbcf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest21.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest21.png -Dname=/<>/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest21.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/40e1bf3ccbf1f82641affc67a52c4789" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest12.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest12.png -Dname=/<>/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest12.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0d5888ff835b3c06ceaa012fd032cfc5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 14%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest30.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest30.png -Dname=/<>/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest30.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/26a15e5f5747959ecdc5989cf8575949" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest03.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest03.png -Dname=/<>/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFilterTest03.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bdb77a6e4ab075670dc81517a8b2d08a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFunctionTest01.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFunctionTest01.png -Dname=/<>/Testing/Data/Baseline/Review/itkDiscreteGaussianDerivativeImageFunctionTest01.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8dde5962ea8c9dbefff164f2bb23d281" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGradientMagnitudeGaussianImageFunctionTest01.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteGradientMagnitudeGaussianImageFunctionTest01.png -Dname=/<>/Testing/Data/Baseline/Review/itkDiscreteGradientMagnitudeGaussianImageFunctionTest01.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fe74be34f3f0c276c4e23f2102454da6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteHessianGaussianImageFunctionTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkDiscreteHessianGaussianImageFunctionTest.mha -Dname=/<>/Testing/Data/Baseline/Review/itkDiscreteHessianGaussianImageFunctionTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/460b7e7a67d6fe9d793457bb702f064a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkFastApproximateRankImageFilter3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkFastApproximateRankImageFilter3.png -Dname=/<>/Testing/Data/Baseline/Review/itkFastApproximateRankImageFilter3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1563b299029d65c0e58288926cc1efc1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkFastApproximateRankImageFilter10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkFastApproximateRankImageFilter10.png -Dname=/<>/Testing/Data/Baseline/Review/itkFastApproximateRankImageFilter10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bc1f25dfeddd8b16fa8e8497a41841ef" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Bretagne1.j2k make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Bretagne1.j2k -Dname=/<>/Testing/Data/Input/Bretagne1.j2k -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b8e9af40a079693deb94e1a5dbdda04c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Cevennes2.jp2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Cevennes2.jp2 -Dname=/<>/Testing/Data/Input/Cevennes2.jp2 -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0a6e1e42dd3f37b6a1abd4b4f30575df" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1.j2k make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSimilarity2DTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkSimilarity2DTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating ../../itkAffineTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1.j2k -Dname=/<>/Testing/Data/Input/cthead1.j2k -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/477b79b6f59053e1ca3fec80caedb509" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4e7053c7ff0c21f7acd4997bc2473c6f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/napack/cg.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/napack/cg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/vnl_unary_function.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/vnl_unary_function.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/LabelImageWithVariousShapes.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/minpack/dpmpar.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating ../../ITKCommonBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/LabelImageWithVariousShapes.png -Dname=/<>/Testing/Data/Input/LabelImageWithVariousShapes.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/27c9a8a1356782a72f60e0424f1f193e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/GrayscaleImageWithVariousShapes.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/GrayscaleImageWithVariousShapes.png -Dname=/<>/Testing/Data/Input/GrayscaleImageWithVariousShapes.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6f5ca15a63b59548d74b64638e461fac" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest.csv make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/minpack/dpmpar.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/minpack/dpmpar.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest.csv -Dname=/<>/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest.csv -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/eb131a2b2a521ec4fdb62eeb7c702180" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/minpack/enorm.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest3D.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNearestNeighborInterpolateImageFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFunction.castxml.inc /<>/BUILD/Wrapping/itkNearestNeighborInterpolateImageFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest3D.mhd -Dname=/<>/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest3D.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/30abc985b9519360a12ae7ce21a1bfc9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating ../../itkRayCastInterpolateImageFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest3D.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSimilarity3DTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkSimilarity3DTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest3D.raw -Dname=/<>/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest3D.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3a9249fa4cbd6e16be48b9f1557eb543" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/minpack/enorm.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/minpack/enorm.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating ../../itkScalableAffineTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/LabelVolumeWithVariousShapes.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/minpack/fdjac2.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/LabelVolumeWithVariousShapes.mhd -Dname=/<>/Testing/Data/Input/LabelVolumeWithVariousShapes.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ad4d03c9c7555fa80fb67af70d3087c3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/LabelVolumeWithVariousShapes.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/LabelVolumeWithVariousShapes.raw -Dname=/<>/Testing/Data/Input/LabelVolumeWithVariousShapes.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d0e79e594caa40de5058de070ed4120f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/GrayscaleVolumeWithVariousShapes.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/GrayscaleVolumeWithVariousShapes.mhd -Dname=/<>/Testing/Data/Input/GrayscaleVolumeWithVariousShapes.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9e000bbd2eff4250b16a546996e0818f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/minpack/fdjac2.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/minpack/fdjac2.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/GrayscaleVolumeWithVariousShapes.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/minpack/lmder.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/GrayscaleVolumeWithVariousShapes.raw -Dname=/<>/Testing/Data/Input/GrayscaleVolumeWithVariousShapes.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/db8f0a0a595871f089abc4316c777d63" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest3D.csv make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest3D.csv -Dname=/<>/Testing/Data/Baseline/Review/itkLabelGeometryImageFilterTest3D.csv -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2e5b85af37bd0d4cda1b5838281beb60" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkMaskedRankImageFilter3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkMaskedRankImageFilter3.png -Dname=/<>/Testing/Data/Baseline/Review/itkMaskedRankImageFilter3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2aa9c71c2d43961987adb59d9a0022ee" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkMaskedRankImageFilter10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkMaskedRankImageFilter10.png -Dname=/<>/Testing/Data/Baseline/Review/itkMaskedRankImageFilter10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6c182c6db8f5b37fc041f4aeeb8641fb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkRankImageFilter3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkRankImageFilter3.png -Dname=/<>/Testing/Data/Baseline/Review/itkRankImageFilter3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ba2eae1dfc61e4f55c775d0ee97b71ac" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkRankImageFilter10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkRankImageFilter10.png -Dname=/<>/Testing/Data/Baseline/Review/itkRankImageFilter10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a4ee0702716525c8b5c9dd06e93e811d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkMultiScaleHessianBasedMeasureImageFilterTestEnhancedOutput.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkMultiScaleHessianBasedMeasureImageFilterTestEnhancedOutput.mha -Dname=/<>/Testing/Data/Baseline/Review/itkMultiScaleHessianBasedMeasureImageFilterTestEnhancedOutput.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ba5a0e204623b5f3718dc70123dcdb32" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/xornet.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/xornet.txt -Dname=/<>/Testing/Data/Input/xornet.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/007403822ac16d16a6ed7e86b794c050" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/xortest.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/xortest.txt -Dname=/<>/Testing/Data/Input/xortest.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c7c8cf39686a526bf6977f31f13fb58a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/minpack/lmder.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/minpack/lmder.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Nonunit/Review/test/Baseline/itkBSplineTransformTest4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/minpack/lmder1.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Nonunit/Review/test/Baseline/itkBSplineTransformTest4.png -Dname=/<>/Modules/Nonunit/Review/test/Baseline/itkBSplineTransformTest4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5b224f70ab454475481a9848f6667936" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkRobustAutomaticThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/minpack/lmder1.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/minpack/lmder1.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/minpack/lmdif.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkRobustAutomaticThresholdImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/Review/itkRobustAutomaticThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9ba33820433c4dc3bf105816e1d93e98" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkScalarChanAndVeseDenseLevelSetImageFilterTest2_0.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkScalarChanAndVeseDenseLevelSetImageFilterTest2_0.mha -Dname=/<>/Testing/Data/Baseline/Review/itkScalarChanAndVeseDenseLevelSetImageFilterTest2_0.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8ecd7b5b6ccd6b524fdd023aa88eeace" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetLeftVentricleTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetLeftVentricleTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetLeftVentricleTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2008fb7643e6b171144c08e6ab8c3349" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetLeftVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetLeftVentricleTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetLeftVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/91dac9c5b0df017401b6572ed4f3e2f1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkScalarChanAndVeseDenseLevelSetImageFilterTest2_1.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkScalarChanAndVeseDenseLevelSetImageFilterTest2_1.mha -Dname=/<>/Testing/Data/Baseline/Review/itkScalarChanAndVeseDenseLevelSetImageFilterTest2_1.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cffc57705db3ec059fb17f6c6e99038e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkScalarChanAndVeseDenseLevelSetImageFilterTest2_2.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkScalarChanAndVeseDenseLevelSetImageFilterTest2_2.mha -Dname=/<>/Testing/Data/Baseline/Review/itkScalarChanAndVeseDenseLevelSetImageFilterTest2_2.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1fbde26c2b3c09ef8f76fe4dce8bdef6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkScalarChanAndVeseSparseLevelSetImageFilterTest2.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkScalarChanAndVeseSparseLevelSetImageFilterTest2.mha -Dname=/<>/Testing/Data/Baseline/Review/itkScalarChanAndVeseSparseLevelSetImageFilterTest2.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5810e876694d5ba73c23aec003ffc320" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkStochasticFractalDimensionImageFilterTest1.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkStochasticFractalDimensionImageFilterTest1.mha -Dname=/<>/Testing/Data/Baseline/Review/itkStochasticFractalDimensionImageFilterTest1.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0e4647acbddec09c8a165651a1a503a2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/TreeBarkTexture.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/minpack/lmdif.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/minpack/lmdif.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/TreeBarkTexture.png -Dname=/<>/Testing/Data/Input/TreeBarkTexture.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c4df1cea71b879c6ece7fd1a6f22d452" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/minpack/lmpar.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkStochasticFractalDimensionImageFilterTest2.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Review/itkStochasticFractalDimensionImageFilterTest2.mha -Dname=/<>/Testing/Data/Baseline/Review/itkStochasticFractalDimensionImageFilterTest2.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0e4647acbddec09c8a165651a1a503a2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/circle100.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/circle100.png -Dname=/<>/Testing/Data/Input/circle100.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a1745ffab1235da85ff40d373b9ee73d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume.cub make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume.cub -Dname=/<>/Testing/Data/Input/HeadMRVolume.cub -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a662c5c9ea9dd4759c527bc883059a1b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume1.cub make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume1.cub -Dname=/<>/Testing/Data/Input/HeadMRVolume1.cub -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a662c5c9ea9dd4759c527bc883059a1b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAffineTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkAffineTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume1.cub.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageToHistogramFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkImageToHistogramFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating ../../itkScaleTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume1.cub.gz -Dname=/<>/Testing/Data/Input/HeadMRVolume1.cub.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8550dcab9c45cd8f5a420a81195cfccb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating ../../itkNormalVariateGenerator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume2.cub.gz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/minpack/lmpar.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/minpack/lmpar.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/minpack/qrfac.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume2.cub.gz -Dname=/<>/Testing/Data/Input/HeadMRVolume2.cub.gz -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8550dcab9c45cd8f5a420a81195cfccb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume2.cub make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/HeadMRVolume2.cub -Dname=/<>/Testing/Data/Input/HeadMRVolume2.cub -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a662c5c9ea9dd4759c527bc883059a1b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkBoxMeanImageFilter3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkBoxMeanImageFilter3.png -Dname=/<>/Testing/Data/Baseline/Filtering/itkBoxMeanImageFilter3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ff59a47f7c7b15f4c1eb356ac25a044d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkBoxMeanImageFilter10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/minpack/qrfac.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/minpack/qrfac.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkBoxMeanImageFilter10.png -Dname=/<>/Testing/Data/Baseline/Filtering/itkBoxMeanImageFilter10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3c072d420930a3c8ea2332442b0820d3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkBoxSigmaImageFilter3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/minpack/qrsolv.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkBoxSigmaImageFilter3.png -Dname=/<>/Testing/Data/Baseline/Filtering/itkBoxSigmaImageFilter3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b317839f581fe278d31e4bbb03752c2d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkBoxSigmaImageFilter10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/itkBoxSigmaImageFilter10.png -Dname=/<>/Testing/Data/Baseline/Filtering/itkBoxSigmaImageFilter10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3be673708a7bb358dd45bbf706d42ef5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/DiscreteGaussianImageFilterTest2_OutputA.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScalableAffineTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkScalableAffineTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating ../../itkScalarImageToCooccurrenceMatrixFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/DiscreteGaussianImageFilterTest2_OutputA.mha -Dname=/<>/Testing/Data/Baseline/BasicFilters/DiscreteGaussianImageFilterTest2_OutputA.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7adbfc9b477a52968635b8ab5c77cc02" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/minpack/qrsolv.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/minpack/qrsolv.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/SpatialObjects/BoxSpatialObjectTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/opt/lbfgs.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/SpatialObjects/BoxSpatialObjectTest.png -Dname=/<>/Testing/Data/Baseline/SpatialObjects/BoxSpatialObjectTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c213d4fd62305a0f8a73280cbf97d88f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Numerics/Statistics/test/Baseline/itkGaussianRandomSubsamplingTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/Statistics/test/Baseline/itkGaussianRandomSubsamplingTest.mha -Dname=/<>/Modules/Numerics/Statistics/test/Baseline/itkGaussianRandomSubsamplingTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4f2594f92e15b8c09bdd86bcc144ddc6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/pointsForKdTree.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/pointsForKdTree.txt -Dname=/<>/Testing/Data/Input/pointsForKdTree.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/86ade7cd9a25c5206b0393068dfa8abc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/pointsForKdTree2.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/pointsForKdTree2.txt -Dname=/<>/Testing/Data/Input/pointsForKdTree2.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d4c144676861b08b8128b1f6725fcddb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Numerics/Statistics/test/Baseline/itkUniformRandomSubsamplingTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Numerics/Statistics/test/Baseline/itkUniformRandomSubsamplingTest.mha -Dname=/<>/Modules/Numerics/Statistics/test/Baseline/itkUniformRandomSubsamplingTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cce94974341802fc01706b153bb15d75" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkOtsuMultipleThresholdsImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkOtsuMultipleThresholdsImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkOtsuMultipleThresholdsImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/32654ac881f4eeb7624cb50adecc42a5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRayCastInterpolateImageFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFunction.castxml.inc /<>/BUILD/Wrapping/itkRayCastInterpolateImageFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeBinaryThresholdProjection.png make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 15%] Built target ITKImageFunctionCastXML make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/BasicFilters/HeadMRVolumeBinaryThresholdProjection.png -Dname=/<>/Testing/Data/Baseline/BasicFilters/HeadMRVolumeBinaryThresholdProjection.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f9380ab1b77d90a9b02cd4b11b3a706f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating ../../itkScalarImageToHistogramGenerator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkHuangThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkHuangThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkHuangThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3f5cf60f765e65a5a9236105e396bd6a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkHuangMaskedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkHuangMaskedThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkHuangMaskedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1138ab9cbc824cba6e46eabc2166d4ad" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/cthead1-threshmask.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/opt/lbfgs.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/opt/lbfgs.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/ITKCommonBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/ITKCommonBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/opt/lbfgsb.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/cthead1-threshmask.png -Dname=/<>/Testing/Data/Input/cthead1-threshmask.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/022c91bc958fd5c6397b2378eff95a66" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating ../../itkSize.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkIntermodesThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkIntermodesThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkIntermodesThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c35c66f24c0f70984aad4995a2ce595b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkIntermodesMaskedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkIntermodesMaskedThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkIntermodesMaskedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1d3cae9c9c46f182d7c6135f856864ff" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkIsoDataThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkIsoDataThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkIsoDataThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/00364cfde89513a86de8228b0bd2e4ea" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkIsoDataMaskedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkIsoDataMaskedThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkIsoDataMaskedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/036b88b10f9fb711e9fe87bc166eef3c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkKittlerIllingworthThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkKittlerIllingworthThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkKittlerIllingworthThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/44f5308de1652641e938fd823c3feaae" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkKittlerIllingworthMaskedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkKittlerIllingworthMaskedThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkKittlerIllingworthMaskedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/03cc2b3ae4c516cfa9576cd86542979c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkLiThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkLiThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkLiThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1728808bbf23008f7a01f3fd5eb2eece" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkLiMaskedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkLiMaskedThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkLiMaskedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8ffdb0626a0acc57383f6560bb3e9db1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkMaximumEntropyThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNormalVariateGenerator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkNormalVariateGenerator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating ../../itkScalarImageToRunLengthFeaturesFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkMaximumEntropyThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkMaximumEntropyThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0df1fdafb6be65ec2c6cd8149058bc02" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkMaximumEntropyMaskedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkMaximumEntropyMaskedThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkMaximumEntropyMaskedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2b002571c4f214cf61848a554ceb679b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/opt/lbfgsb.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/opt/lbfgsb.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkMomentsThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building CXX object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linalg/lsqrBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkMomentsThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkMomentsThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8226090eaffe1e0c8264dff014d0f634" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkMomentsMaskedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkMomentsMaskedThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkMomentsMaskedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/00507edaa64607d62de40375d48fe0f9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkOtsuThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkOtsuThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkOtsuThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/679279da24b82874797d62965e50270e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkOtsuMultipleThresholdsImageFilterTest3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkOtsuMultipleThresholdsImageFilterTest3.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkOtsuMultipleThresholdsImageFilterTest3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/013613c5bd67fd710c0b91c799a3ca41" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/DotOnVaryingBackground.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScaleTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkScaleTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/DotOnVaryingBackground.png -Dname=/<>/Testing/Data/Input/DotOnVaryingBackground.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b7719c20f2dc12209d6acf0592c5d23a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkOtsuMultipleThresholdsImageFilterTest4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating ../../itkKernelTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkOtsuMultipleThresholdsImageFilterTest4.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkOtsuMultipleThresholdsImageFilterTest4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c10c9cb16cc9829428bd4e1cbb160f5b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkOtsuMaskedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkOtsuMaskedThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkOtsuMaskedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e9c52c9950f188fadc1d4c8ffc05c10d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkRenyiEntropyThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkRenyiEntropyThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkRenyiEntropyThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ee55bda3025300eaed4343d3f771ebac" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkRenyiEntropyMaskedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkRenyiEntropyMaskedThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkRenyiEntropyMaskedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2b002571c4f214cf61848a554ceb679b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkShanbhagThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkShanbhagThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkShanbhagThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8226090eaffe1e0c8264dff014d0f634" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkShanbhagMaskedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkShanbhagMaskedThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkShanbhagMaskedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/eddd01d672c014d26a5829716a1733f5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkTriangleThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkTriangleThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkTriangleThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/033ff63e78c5a007d54edeca6606b99a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkTriangleMaskedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkTriangleMaskedThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkTriangleMaskedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/03cc2b3ae4c516cfa9576cd86542979c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkYenThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkYenThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkYenThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c9191f7cb68441d645cacb72cfe75a38" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkYenMaskedThresholdImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkYenMaskedThresholdImageFilterTest.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkYenMaskedThresholdImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2b002571c4f214cf61848a554ceb679b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkHuangThresholdImageFilterTestShort.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkHuangThresholdImageFilterTestShort.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkHuangThresholdImageFilterTestShort.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8e84ddc50e1790fd31cb5a2945ae9314" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkIntermodesThresholdImageFilterTestShort.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkIntermodesThresholdImageFilterTestShort.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkIntermodesThresholdImageFilterTestShort.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9a5db0c58fe82db02ccb3fce6786e292" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkIsoDataThresholdImageFilterTestShort.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkIsoDataThresholdImageFilterTestShort.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkIsoDataThresholdImageFilterTestShort.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b13acc646d0db0ab507025735d837f25" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkKittlerIllingworthThresholdImageFilterTestShort.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSize.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkSize.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating ../../itkOffset.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkKittlerIllingworthThresholdImageFilterTestShort.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkKittlerIllingworthThresholdImageFilterTestShort.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f521bd34b40a7300507aa2fe7e4052f9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkLiThresholdImageFilterTestShort.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/c++ -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linalg/lsqrBase.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg/lsqrBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building CXX object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linalg/lsqrDense.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkLiThresholdImageFilterTestShort.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkLiThresholdImageFilterTestShort.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/aab8c9e2a9da8da53a800e5cff37eab4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkMaximumEntropyThresholdImageFilterTestShort.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkMaximumEntropyThresholdImageFilterTestShort.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkMaximumEntropyThresholdImageFilterTestShort.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d77cfc74df8ea32d5cb379792fd8e0bb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkMomentsThresholdImageFilterTestShort.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/c++ -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linalg/lsqrDense.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg/lsqrDense.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkMomentsThresholdImageFilterTestShort.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkMomentsThresholdImageFilterTestShort.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b00c89d9ce2ce0ab3638e0d962c923da" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkOtsuThresholdImageFilterTestShort.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Building CXX object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linalg/lsmrBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkOtsuThresholdImageFilterTestShort.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkOtsuThresholdImageFilterTestShort.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/dcb2687c19f51e4744e29e46066e0ae7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkRenyiEntropyThresholdImageFilterTestShort.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkRenyiEntropyThresholdImageFilterTestShort.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkRenyiEntropyThresholdImageFilterTestShort.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d77cfc74df8ea32d5cb379792fd8e0bb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkShanbhagThresholdImageFilterTestShort.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkShanbhagThresholdImageFilterTestShort.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkShanbhagThresholdImageFilterTestShort.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a09b06362e5fc43a79005d44261185bd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 15%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkTriangleThresholdImageFilterTestShort.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkTriangleThresholdImageFilterTestShort.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkTriangleThresholdImageFilterTestShort.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ca0ef78bc11b6e0fd8b4b2bd2d061819" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkYenThresholdImageFilterTestShort.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkYenThresholdImageFilterTestShort.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkYenThresholdImageFilterTestShort.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d77cfc74df8ea32d5cb379792fd8e0bb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkKappaSigmaThresholdImageFilterTest01.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkKappaSigmaThresholdImageFilterTest01.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkKappaSigmaThresholdImageFilterTest01.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f8bca7784b541e48d73fef396c69fc6b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkKappaSigmaThresholdImageFilterTest02.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScalarImageToCooccurrenceMatrixFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkScalarImageToCooccurrenceMatrixFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Filtering/Thresholding/test/Baseline/itkKappaSigmaThresholdImageFilterTest02.png -Dname=/<>/Modules/Filtering/Thresholding/test/Baseline/itkKappaSigmaThresholdImageFilterTest02.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c97875180340d5c10f328531ffc77b04" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating ../../itkScalarImageToRunLengthMatrixFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineDeformableTransformTest2PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineDeformableTransformTest2PixelCentered.png -Dname=/<>/Modules/Core/Transform/test/Baseline/itkBSplineDeformableTransformTest2PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/da22b0d81e237d07ff754c64a03fe2de" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/BSplineDeformationTransformDisplacements5.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/BSplineDeformationTransformDisplacements5.txt -Dname=/<>/Modules/Core/Transform/test/Baseline/BSplineDeformationTransformDisplacements5.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9579b5ecfd4cdd0e370d00efcf896604" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineDeformableTransformTest3PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineDeformableTransformTest3PixelCentered.png -Dname=/<>/Modules/Core/Transform/test/Baseline/itkBSplineDeformableTransformTest3PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/02306b45c5cd5d871d6e02ea1e53c02c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/BSplineDeformationTransformDisplacements3.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/BSplineDeformationTransformDisplacements3.txt -Dname=/<>/Modules/Core/Transform/test/Baseline/BSplineDeformationTransformDisplacements3.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2da597365b4ef6321e427d4313ee2ea5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineDeformableTransformTest4PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineDeformableTransformTest4PixelCentered.png -Dname=/<>/Modules/Core/Transform/test/Baseline/itkBSplineDeformableTransformTest4PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3d3d7f3ea69dcc448b2fdc47cae5b0c5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/BSplineDeformationTransformDisplacements1.txt make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/BSplineDeformationTransformDisplacements1.txt -Dname=/<>/Modules/Core/Transform/test/Baseline/BSplineDeformationTransformDisplacements1.txt -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8c6688beeaf380bbda09938b8fa59055" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineDeformableTransformTest5PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineDeformableTransformTest5PixelCentered.png -Dname=/<>/Modules/Core/Transform/test/Baseline/itkBSplineDeformableTransformTest5PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6a0d63ca66f8485ed5810bf98be0d413" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineTransformTest2PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineTransformTest2PixelCentered.png -Dname=/<>/Modules/Core/Transform/test/Baseline/itkBSplineTransformTest2PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f8f72bc2b5a59f338d9d6cc1350f6e1f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineTransformTest3PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineTransformTest3PixelCentered.png -Dname=/<>/Modules/Core/Transform/test/Baseline/itkBSplineTransformTest3PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6ee2a2ac641872fdf2271c424bfe9d25" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineTransformTest4PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Core/Transform/test/Baseline/itkBSplineTransformTest4PixelCentered.png -Dname=/<>/Modules/Core/Transform/test/Baseline/itkBSplineTransformTest4PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d35e22fd21054b74ff1c368a88ec6efe" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Video/Filtering/test/Input/frame0.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Video/Filtering/test/Input/frame0.jpg -Dname=/<>/Modules/Video/Filtering/test/Input/frame0.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/71741434b0329f913aa7bb4514f03e09" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Video/Filtering/test/Input/frame1.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Video/Filtering/test/Input/frame1.jpg -Dname=/<>/Modules/Video/Filtering/test/Input/frame1.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fd8c471cf685bff9682021ad27256b72" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Video/Filtering/test/Input/frame2.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Video/Filtering/test/Input/frame2.jpg -Dname=/<>/Modules/Video/Filtering/test/Input/frame2.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b4698aeedfa6fa6f3785d9844d466ede" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Video/Filtering/test/Input/frame3.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Video/Filtering/test/Input/frame3.jpg -Dname=/<>/Modules/Video/Filtering/test/Input/frame3.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/59d56f2f5c76c71e282767f625feb95a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Video/Filtering/test/Input/frame4.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Video/Filtering/test/Input/frame4.jpg -Dname=/<>/Modules/Video/Filtering/test/Input/frame4.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bf556bde3f3ffb83629f086024d5c431" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Video/IO/test/Input/frame0.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Video/IO/test/Input/frame0.jpg -Dname=/<>/Modules/Video/IO/test/Input/frame0.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/71741434b0329f913aa7bb4514f03e09" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Video/IO/test/Input/frame1.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Video/IO/test/Input/frame1.jpg -Dname=/<>/Modules/Video/IO/test/Input/frame1.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fd8c471cf685bff9682021ad27256b72" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Video/IO/test/Input/frame2.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Video/IO/test/Input/frame2.jpg -Dname=/<>/Modules/Video/IO/test/Input/frame2.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b4698aeedfa6fa6f3785d9844d466ede" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Video/IO/test/Input/frame3.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Video/IO/test/Input/frame3.jpg -Dname=/<>/Modules/Video/IO/test/Input/frame3.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/59d56f2f5c76c71e282767f625feb95a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScalarImageToHistogramGenerator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkScalarImageToHistogramGenerator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Video/IO/test/Input/frame4.jpg make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating ../../itkScalarImageToTextureFeaturesFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Video/IO/test/Input/frame4.jpg -Dname=/<>/Modules/Video/IO/test/Input/frame4.jpg -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bf556bde3f3ffb83629f086024d5c431" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/c++ -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linalg/lsmrBase.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg/lsmrBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Building CXX object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/linalg/lsmrDense.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.1.png -Dname=/<>/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9ddf6cf4709a8c4fb28eff80b43821f7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.2.png -Dname=/<>/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/95face9661f721a00f2675006dd4ff83" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.3.png -Dname=/<>/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f6910e9dd51df57e149ef84c5ef7c0c0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/c++ -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/linalg/lsmrDense.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg/lsmrDense.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.4.png -Dname=/<>/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/877c8bf5ab704e1d7042e97b5670d05c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.5.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/toms/rpoly.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.5.png -Dname=/<>/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.5.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/57e0335b4d3e53ad7d3e4de9bf394215" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.6.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkOffset.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkOffset.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.6.png -Dname=/<>/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.6.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c94f6181aea9f82c98df37b8f63c7165" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkKernelTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkKernelTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating ../../itkArray.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating ../../itkAzimuthElevationToCartesianTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScalarImageToRunLengthFeaturesFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkScalarImageToRunLengthFeaturesFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.png -Dname=/<>/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5140cb1f4269df9b9de6f0161d72d457" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest2.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest2.1.png -Dname=/<>/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest2.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e3edbd58088133b377a8dcef1311210a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/Algorithms/VoronoiPartioningImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/633286a77f76abd8b11a2d67eaca85b5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkTobogganImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkIsolatedWatershedImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkIsolatedWatershedImageFilterTest.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkIsolatedWatershedImageFilterTest.png -Dexts=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b19ea6df9f910060bb62fa5e983c59f1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkTobogganImageFilterTest.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkTobogganImageFilterTest.png -Dexts=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e51a9e5973dcd8fe01c23495bc46023a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkIsolatedWatershedImageFilterTestCloseThresholds.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedFromMarkersImageFilterTestM0F0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkIsolatedWatershedImageFilterTestCloseThresholds.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkIsolatedWatershedImageFilterTestCloseThresholds.png -Dexts=.md5 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/edc580d50b7d98d89997423ae7d043bd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedFromMarkersImageFilterTestM0F0.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedFromMarkersImageFilterTestM0F0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/160b33cb80cd6b0f7850be785dd110ca" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedFromMarkersImageFilterTestM0F1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedFromMarkersImageFilterTestM1F0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedFromMarkersImageFilterTestM0F1.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedFromMarkersImageFilterTestM0F1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fa89427ffcdc4a9fe251d14414529589" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedFromMarkersImageFilterTestM1F1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedFromMarkersImageFilterTestM1F0.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedFromMarkersImageFilterTestM1F0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0ba9d532095c245f96715f0506ed52e0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestButtonHoleM0F0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedFromMarkersImageFilterTestM1F1.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedFromMarkersImageFilterTestM1F1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/438a214680fa78e79451afa29ab5883b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestButtonHoleM0F0.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestButtonHoleM0F0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e0c906ed2b329b471301a9891229d4fd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPassValuesM0F0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/button-hole.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPassValuesM0F0.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPassValuesM0F0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3d014f0356c55af02606ee8873661285" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/button-hole.png -Dname=/<>/Testing/Data/Input/button-hole.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ed5cf12fb9503dd3e7425d396e6e0c43" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/pass-values.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPlateauM0F0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/pass-values.png -Dname=/<>/Testing/Data/Input/pass-values.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/edbd9048adeea88895f298d5c4031464" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/plateau.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPlateauM0F0.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPlateauM0F0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/edf2a7ab389b05dcdc4f2e1fe5b70496" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/plateau.png -Dname=/<>/Testing/Data/Input/plateau.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/defcea9bd7e669ad0539657ab96cbdb0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestThickLinesM0F0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/thick-lines.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestThickLinesM0F0.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestThickLinesM0F0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0010e97b9d899be916a4e82cb6267c71" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/thick-lines.png -Dname=/<>/Testing/Data/Input/thick-lines.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/56eb297a16710fa2ff18ffbffcd09099" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPassValuesM0F1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestButtonHoleM0F1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPassValuesM0F1.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPassValuesM0F1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9cf7a44fc941ed6bfeaa0a3984d07d46" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestButtonHoleM0F1.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestButtonHoleM0F1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3c7eb9f0a59c7dbae76e390e72f20857" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPlateauM0F1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestThickLinesM0F1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPlateauM0F1.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPlateauM0F1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cb257c8c5dd4c8ee9b279823f838ca67" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestButtonHoleM1F0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestThickLinesM0F1.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestThickLinesM0F1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4cdc2af8e1a6401244940c4da202e984" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPassValuesM1F0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestButtonHoleM1F0.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestButtonHoleM1F0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/56963f4fdb695706349e1a283ad41dd7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/toms/rpoly.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/toms/rpoly.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPlateauM1F0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPassValuesM1F0.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPassValuesM1F0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9d7163e836b63cb5d9186e54369eea07" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/datapac/camsun.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/mathews/simpson.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPlateauM1F0.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPlateauM1F0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/61b35b2e7cb84a50b0804e3fe569946e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestThickLinesM1F0.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestThickLinesM1F0.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestThickLinesM1F0.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3eed6d9a5f0125eac28f5c86688f180b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestButtonHoleM1F1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/mathews/simpson.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/mathews/simpson.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestButtonHoleM1F1.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestButtonHoleM1F1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/01e042beb3816507c93ee00bfb707e16" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPassValuesM1F1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/mathews/trapezod.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPassValuesM1F1.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPassValuesM1F1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/baa55eec5cd30cbcd80f3121e906fe15" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPlateauM1F1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPlateauM1F1.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestPlateauM1F1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5d231ae235ab0aa133e66cc878b2d45b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestThickLinesM1F1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/datapac/camsun.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/datapac/camsun.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestThickLinesM1F1.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestThickLinesM1F1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4b8b01198108e728983ba475e4641b1a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/mathews/adaquad.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/mathews/trapezod.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/mathews/trapezod.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel00.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/sparse/spAllocate.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel00.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel00.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3441cdc8e581e9c8d2b527a3426b5d52" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel10.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel10.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel10.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/162139b00742872d6decf623da8b8fb0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel20.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel20.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel20.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ec63c7501c4e6391d37e69c4ca75735a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel30.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel30.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel30.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/08c735a9c7278820003b411a64ab8919" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScalarImageToRunLengthMatrixFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkScalarImageToRunLengthMatrixFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/mathews/adaquad.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/mathews/adaquad.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel40.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel50.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/sparse/spBuild.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel40.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel40.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/08c735a9c7278820003b411a64ab8919" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel50.png -Dname=/<>/Modules/Segmentation/Watersheds/test/Baseline/itkMorphologicalWatershedImageFilterTestLevel50.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d1a84ae965f9773625278ba404c40ea6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/MedianImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/cthead1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/MedianImageFilter.png -Dname=/<>/Wrapping/images/MedianImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/16d3ea9cbe34b5221c4a8a8e76c62a5a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/cthead1.png -Dname=/<>/Wrapping/images/cthead1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e395391caad7463c8231bd5f2ce9d61b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/templated_pipeline.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/2th_cthead1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/templated_pipeline.png -Dname=/<>/Wrapping/images/templated_pipeline.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/32a673505b126cdcd98b967550189d93" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/sparse/spAllocate.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/sparse/spAllocate.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/2th_cthead1.png -Dname=/<>/Wrapping/images/2th_cthead1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/be688230b2ed67097039385cc13b04a8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/BinaryDilateImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/BinaryErodeImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/sparse/spFactor.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/BinaryDilateImageFilter.png -Dname=/<>/Wrapping/images/BinaryDilateImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fff360f0eb2987cddffcc64a57389161" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/BinaryErodeImageFilter.png -Dname=/<>/Wrapping/images/BinaryErodeImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/218dd9062c78e80545ed0e1125e894ff" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/BinaryThresholdImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/GrayscaleDilateImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/BinaryThresholdImageFilter.png -Dname=/<>/Wrapping/images/BinaryThresholdImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7dfb3df19f3eb3f0d0bb5e122d9fd598" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/BoxGrayscaleDilateImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/GrayscaleDilateImageFilter.png -Dname=/<>/Wrapping/images/GrayscaleDilateImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/271cc817aa346228788b0b881197897a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/GrayscaleErodeImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/BoxGrayscaleDilateImageFilter.png -Dname=/<>/Wrapping/images/BoxGrayscaleDilateImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fad4e0b852e924ad17d558c4a9068d53" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/GrayscaleErodeImageFilter.png -Dname=/<>/Wrapping/images/GrayscaleErodeImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8efdad8a090262ed25a9fb44ad8c078a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/MeanImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/SigmoidImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/sparse/spBuild.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/sparse/spBuild.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/MeanImageFilter.png -Dname=/<>/Wrapping/images/MeanImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/50eb60b76f3eeb6b39c6baffc0973d07" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/sparse/spSolve.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/SigmoidImageFilter.png -Dname=/<>/Wrapping/images/SigmoidImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f565c96db1f7db1acaa5355df6328acc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/ThresholdImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/ResampleImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/ThresholdImageFilter.png -Dname=/<>/Wrapping/images/ThresholdImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ed4cacbdc9bd831d5eb398f1ddc1f1eb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/ResampleImageFilterTest1.png -Dname=/<>/Wrapping/images/ResampleImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/84ec552555dc60e5fda3bbd6819f9fea" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/ResampleImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/BrainProtonDensitySlice.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/BrainProtonDensitySlice.png -Dname=/<>/Wrapping/images/BrainProtonDensitySlice.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/113606df5bf3bea295e3ed83d6a4f3c4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/ResampleImageFilterTest2.png -Dname=/<>/Wrapping/images/ResampleImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/23b1ebdf872633dce8e66ef0655cbf14" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/ResampleImageFilterTest3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/ResampleImageFilterTest4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/sparse/spSolve.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/sparse/spSolve.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/ResampleImageFilterTest3.png -Dname=/<>/Wrapping/images/ResampleImageFilterTest3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4e7f6483ac6560e6d195ebd3745f1be5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/FFTImageFilterReal.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/ResampleImageFilterTest4.png -Dname=/<>/Wrapping/images/ResampleImageFilterTest4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/84ec552555dc60e5fda3bbd6819f9fea" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/sparse/spUtils.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/FFTImageFilterReal.png -Dname=/<>/Wrapping/images/FFTImageFilterReal.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e4554d81ae0c21159897f39a63cdff8f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/FFTImageFilterImaginary.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkArray.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkArray.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating ../../itkIndex.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/FFTImageFilterImaginary.png -Dname=/<>/Wrapping/images/FFTImageFilterImaginary.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0920f009146d72996b1768706de910e9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating ../../itkContinuousIndex.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/GradientMagnitudeRecursiveGaussianImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/GradientMagnitudeRecursiveGaussianImageFilter.png -Dname=/<>/Wrapping/images/GradientMagnitudeRecursiveGaussianImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cf780f9561b1e9a605aed5d7188edf03" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/GradientAnisotropicDiffusionImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAzimuthElevationToCartesianTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkAzimuthElevationToCartesianTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/GradientAnisotropicDiffusionImageFilter.png -Dname=/<>/Wrapping/images/GradientAnisotropicDiffusionImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3ab350b38d77adbed1d587b5dbadbf70" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating ../../itkBSplineBaseTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/FastMarchingLeftVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/FastMarchingLeftVentricleTest.png -Dname=/<>/Wrapping/images/FastMarchingLeftVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b53bd1eccf764bc8471b9d4527970e87" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/FastMarchingRightVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/FastMarchingRightVentricleTest.png -Dname=/<>/Wrapping/images/FastMarchingRightVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d47267e9ee7f9474cfe7c563c7c0cc79" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/FastMarchingWhiteMatterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/FastMarchingWhiteMatterTest.png -Dname=/<>/Wrapping/images/FastMarchingWhiteMatterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c21eefcba513f6c291a4c56e41d0424e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/FastMarchingGrayMatterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/FastMarchingGrayMatterTest.png -Dname=/<>/Wrapping/images/FastMarchingGrayMatterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5b8d6568fd95c4eeff49e5647ab38264" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/ThresholdSegmentationLevelSetVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/sparse/spFactor.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/sparse/spFactor.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/ThresholdSegmentationLevelSetVentricleTest.png -Dname=/<>/Wrapping/images/ThresholdSegmentationLevelSetVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/859a9c820427e648a78bce075d23f0a3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/CMakeFiles/itkv3p_netlib.dir/sparse/spOutput.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/ThresholdSegmentationLevelSetWhiteMatterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/ThresholdSegmentationLevelSetWhiteMatterTest.png -Dname=/<>/Wrapping/images/ThresholdSegmentationLevelSetWhiteMatterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b2d1cef3cf76c546b9af86783c2fc0d6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/CannyEdgeDetectionImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/sparse/spUtils.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/sparse/spUtils.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/CannyEdgeDetectionImageFilter.png -Dname=/<>/Wrapping/images/CannyEdgeDetectionImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2b64284ff8fa40692064e0f537641b6e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/WatershedSegmentation1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 16%] Generating /<>/BUILD/ExternalData/Wrapping/images/VisibleWomanEyeSlice.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/WatershedSegmentation1.png -Dname=/<>/Wrapping/images/WatershedSegmentation1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/012779e61538b8a6089518362518d7db" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/VisibleWomanEyeSlice.png -Dname=/<>/Wrapping/images/VisibleWomanEyeSlice.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1aaec57175b272378b0256134b607afc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Wrapping/images/SpatialObject.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Wrapping/images/AntiAliasBinaryImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/SpatialObject.png -Dname=/<>/Wrapping/images/SpatialObject.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/183d7624fb599274b62d130fbfb7454e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkv3p_netlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkv3p_netlib.dir/sparse/spOutput.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/sparse/spOutput.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/AntiAliasBinaryImageFilter.png -Dname=/<>/Wrapping/images/AntiAliasBinaryImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/92bb37ebe8e7f0572cf4137238f995cd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Wrapping/images/VentricleModel.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Linking CXX shared library ../../../../../../../lib/libitkv3p_netlib-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Iterators/ImageLinearIteratorWithIndexTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Wrapping/images/VentricleModel.png -Dname=/<>/Wrapping/images/VentricleModel.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d4ef4e7e6da2533d09bcd2b8b075332e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Iterators/ImageRegionIteratorWithIndexTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Iterators/ImageLinearIteratorWithIndexTest.png -Dname=/<>/Testing/Data/Baseline/Iterators/ImageLinearIteratorWithIndexTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d19afb86244f62153bdb086d600c924a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Iterators/ImageRegionIteratorTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Iterators/ImageRegionIteratorWithIndexTest.png -Dname=/<>/Testing/Data/Baseline/Iterators/ImageRegionIteratorWithIndexTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d19afb86244f62153bdb086d600c924a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Iterators/ImageRegionIteratorTest.png -Dname=/<>/Testing/Data/Baseline/Iterators/ImageRegionIteratorTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0a0857933498dab79b9c44fac72bb64a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Iterators/ImageSliceIteratorWithIndexTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BilateralImageFilter.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Iterators/ImageSliceIteratorWithIndexTest.mha -Dname=/<>/Testing/Data/Baseline/Iterators/ImageSliceIteratorWithIndexTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ad80321f366d76743fc2eea45d776da1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BilateralImageFilter.1.png -Dname=/<>/Testing/Data/Baseline/Filtering/BilateralImageFilter.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0a00bb3abd6ba00b1e56fd18ccf4edef" make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridCastXML.dir/build.make Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageGrid/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageGrid /<>/BUILD/Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageGridCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridCastXML.dir/build.make Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BilateralImageFilter.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BilateralImageFilter.2.png -Dname=/<>/Testing/Data/Baseline/Filtering/BilateralImageFilter.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9d2f36982221325ab4a69cb5fa44563d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating ../../itkPadImageFilterBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BilateralImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BilateralImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/BilateralImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/936828770ada87abcb2fa808027c1d14" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BinaryMinMaxCurvatureFlowImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkv3p_netlib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libitkv3p_netlib-4.12.so.1 -o ../../../../../../../lib/libitkv3p_netlib-4.12.so.1 CMakeFiles/itkv3p_netlib.dir/v3p_netlib_init.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/f77_aloc.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/exit_.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/c_abs.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/c_div.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/c_sqrt.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/cabs.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/d_cnjg.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/d_imag.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/d_lg10.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/d_sign.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/i_dnnt.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/pow_dd.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/pow_di.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/pow_ii.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/pow_ri.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/pow_zi.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/r_cnjg.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/r_imag.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/r_sign.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/s_cat.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/s_cmp.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/s_copy.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/sig_die.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/z_abs.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/z_div.c.o CMakeFiles/itkv3p_netlib.dir/libf2c/z_sqrt.c.o CMakeFiles/itkv3p_netlib.dir/blas/caxpy.c.o CMakeFiles/itkv3p_netlib.dir/blas/ccopy.c.o CMakeFiles/itkv3p_netlib.dir/blas/cdotc.c.o CMakeFiles/itkv3p_netlib.dir/blas/cscal.c.o CMakeFiles/itkv3p_netlib.dir/blas/csrot.c.o CMakeFiles/itkv3p_netlib.dir/blas/cswap.c.o CMakeFiles/itkv3p_netlib.dir/blas/dasum.c.o CMakeFiles/itkv3p_netlib.dir/blas/daxpy.c.o CMakeFiles/itkv3p_netlib.dir/blas/dcabs1.c.o CMakeFiles/itkv3p_netlib.dir/blas/dcopy.c.o CMakeFiles/itkv3p_netlib.dir/blas/ddot.c.o CMakeFiles/itkv3p_netlib.dir/blas/dgemm.c.o CMakeFiles/itkv3p_netlib.dir/blas/dgemv.c.o CMakeFiles/itkv3p_netlib.dir/blas/dger.c.o CMakeFiles/itkv3p_netlib.dir/blas/dlamch.c.o CMakeFiles/itkv3p_netlib.dir/blas/dnrm2.c.o CMakeFiles/itkv3p_netlib.dir/blas/drot.c.o CMakeFiles/itkv3p_netlib.dir/blas/drotg.c.o CMakeFiles/itkv3p_netlib.dir/blas/dscal.c.o CMakeFiles/itkv3p_netlib.dir/blas/dswap.c.o CMakeFiles/itkv3p_netlib.dir/blas/dtrmm.c.o CMakeFiles/itkv3p_netlib.dir/blas/dtrmv.c.o CMakeFiles/itkv3p_netlib.dir/blas/dtrsv.c.o CMakeFiles/itkv3p_netlib.dir/blas/dzasum.c.o CMakeFiles/itkv3p_netlib.dir/blas/dznrm2.c.o CMakeFiles/itkv3p_netlib.dir/blas/idamax.c.o CMakeFiles/itkv3p_netlib.dir/blas/isamax.c.o CMakeFiles/itkv3p_netlib.dir/blas/izamax.c.o CMakeFiles/itkv3p_netlib.dir/blas/saxpy.c.o CMakeFiles/itkv3p_netlib.dir/blas/scnrm2.c.o CMakeFiles/itkv3p_netlib.dir/blas/scopy.c.o CMakeFiles/itkv3p_netlib.dir/blas/sdot.c.o CMakeFiles/itkv3p_netlib.dir/blas/sgemv.c.o CMakeFiles/itkv3p_netlib.dir/blas/sger.c.o CMakeFiles/itkv3p_netlib.dir/blas/slamch.c.o CMakeFiles/itkv3p_netlib.dir/blas/snrm2.c.o CMakeFiles/itkv3p_netlib.dir/blas/srot.c.o CMakeFiles/itkv3p_netlib.dir/blas/srotg.c.o CMakeFiles/itkv3p_netlib.dir/blas/sscal.c.o CMakeFiles/itkv3p_netlib.dir/blas/sswap.c.o CMakeFiles/itkv3p_netlib.dir/blas/xerbla.c.o CMakeFiles/itkv3p_netlib.dir/blas/zaxpy.c.o CMakeFiles/itkv3p_netlib.dir/blas/zcopy.c.o CMakeFiles/itkv3p_netlib.dir/blas/zdotc.c.o CMakeFiles/itkv3p_netlib.dir/blas/zdotu.c.o CMakeFiles/itkv3p_netlib.dir/blas/zdrot.c.o CMakeFiles/itkv3p_netlib.dir/blas/zdscal.c.o CMakeFiles/itkv3p_netlib.dir/blas/zgemm.c.o CMakeFiles/itkv3p_netlib.dir/blas/zgemv.c.o CMakeFiles/itkv3p_netlib.dir/blas/zgerc.c.o CMakeFiles/itkv3p_netlib.dir/blas/zgeru.c.o CMakeFiles/itkv3p_netlib.dir/blas/zscal.c.o CMakeFiles/itkv3p_netlib.dir/blas/zswap.c.o CMakeFiles/itkv3p_netlib.dir/blas/ztrmm.c.o CMakeFiles/itkv3p_netlib.dir/blas/ztrmv.c.o CMakeFiles/itkv3p_netlib.dir/blas/ztrsv.c.o CMakeFiles/itkv3p_netlib.dir/arpack/dgetv0.c.o CMakeFiles/itkv3p_netlib.dir/arpack/dsaitr.c.o CMakeFiles/itkv3p_netlib.dir/arpack/dsapps.c.o CMakeFiles/itkv3p_netlib.dir/arpack/dsaup2.c.o CMakeFiles/itkv3p_netlib.dir/arpack/dsaupd.c.o CMakeFiles/itkv3p_netlib.dir/arpack/dsconv.c.o CMakeFiles/itkv3p_netlib.dir/arpack/dseigt.c.o CMakeFiles/itkv3p_netlib.dir/arpack/dsesrt.c.o CMakeFiles/itkv3p_netlib.dir/arpack/dseupd.c.o CMakeFiles/itkv3p_netlib.dir/arpack/dsgets.c.o CMakeFiles/itkv3p_netlib.dir/arpack/dsortr.c.o CMakeFiles/itkv3p_netlib.dir/arpack/dstqrb.c.o CMakeFiles/itkv3p_netlib.dir/linpack/sqrdc.c.o CMakeFiles/itkv3p_netlib.dir/linpack/dqrdc.c.o CMakeFiles/itkv3p_netlib.dir/linpack/cqrdc.c.o CMakeFiles/itkv3p_netlib.dir/linpack/zqrdc.c.o CMakeFiles/itkv3p_netlib.dir/linpack/sqrsl.c.o CMakeFiles/itkv3p_netlib.dir/linpack/dqrsl.c.o CMakeFiles/itkv3p_netlib.dir/linpack/cqrsl.c.o CMakeFiles/itkv3p_netlib.dir/linpack/zqrsl.c.o CMakeFiles/itkv3p_netlib.dir/linpack/csvdc.c.o CMakeFiles/itkv3p_netlib.dir/linpack/dsvdc.c.o CMakeFiles/itkv3p_netlib.dir/linpack/ssvdc.c.o CMakeFiles/itkv3p_netlib.dir/linpack/zsvdc.c.o CMakeFiles/itkv3p_netlib.dir/linpack/dpoco.c.o CMakeFiles/itkv3p_netlib.dir/linpack/dpodi.c.o CMakeFiles/itkv3p_netlib.dir/linpack/dpofa.c.o CMakeFiles/itkv3p_netlib.dir/linpack/dposl.c.o CMakeFiles/itkv3p_netlib.dir/temperton/dgpfa.c.o CMakeFiles/itkv3p_netlib.dir/temperton/dgpfa2f.c.o CMakeFiles/itkv3p_netlib.dir/temperton/dgpfa3f.c.o CMakeFiles/itkv3p_netlib.dir/temperton/dgpfa5f.c.o CMakeFiles/itkv3p_netlib.dir/temperton/gpfa.c.o CMakeFiles/itkv3p_netlib.dir/temperton/gpfa2f.c.o CMakeFiles/itkv3p_netlib.dir/temperton/gpfa3f.c.o CMakeFiles/itkv3p_netlib.dir/temperton/gpfa5f.c.o CMakeFiles/itkv3p_netlib.dir/temperton/setdgpfa.c.o CMakeFiles/itkv3p_netlib.dir/temperton/setgpfa.c.o CMakeFiles/itkv3p_netlib.dir/eispack/balanc.c.o CMakeFiles/itkv3p_netlib.dir/eispack/balbak.c.o CMakeFiles/itkv3p_netlib.dir/eispack/cdiv.c.o CMakeFiles/itkv3p_netlib.dir/eispack/elmhes.c.o CMakeFiles/itkv3p_netlib.dir/eispack/eltran.c.o CMakeFiles/itkv3p_netlib.dir/eispack/epslon.c.o CMakeFiles/itkv3p_netlib.dir/eispack/hqr.c.o CMakeFiles/itkv3p_netlib.dir/eispack/hqr2.c.o CMakeFiles/itkv3p_netlib.dir/eispack/otqlrat.c.o CMakeFiles/itkv3p_netlib.dir/eispack/pythag.c.o CMakeFiles/itkv3p_netlib.dir/eispack/rebak.c.o CMakeFiles/itkv3p_netlib.dir/eispack/reduc.c.o CMakeFiles/itkv3p_netlib.dir/eispack/rg.c.o CMakeFiles/itkv3p_netlib.dir/eispack/rs.c.o CMakeFiles/itkv3p_netlib.dir/eispack/rsg.c.o CMakeFiles/itkv3p_netlib.dir/eispack/tql1.c.o CMakeFiles/itkv3p_netlib.dir/eispack/tql2.c.o CMakeFiles/itkv3p_netlib.dir/eispack/tred1.c.o CMakeFiles/itkv3p_netlib.dir/eispack/tred2.c.o CMakeFiles/itkv3p_netlib.dir/laso/dlabax.c.o CMakeFiles/itkv3p_netlib.dir/laso/dlabcm.c.o CMakeFiles/itkv3p_netlib.dir/laso/dlabfc.c.o CMakeFiles/itkv3p_netlib.dir/laso/dlaeig.c.o CMakeFiles/itkv3p_netlib.dir/laso/dlager.c.o CMakeFiles/itkv3p_netlib.dir/laso/dlaran.c.o CMakeFiles/itkv3p_netlib.dir/laso/dmvpc.c.o CMakeFiles/itkv3p_netlib.dir/laso/dnlaso.c.o CMakeFiles/itkv3p_netlib.dir/laso/dnppla.c.o CMakeFiles/itkv3p_netlib.dir/laso/dortqr.c.o CMakeFiles/itkv3p_netlib.dir/laso/dvsort.c.o CMakeFiles/itkv3p_netlib.dir/laso/urand.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgebak.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgebal.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgeev.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgehd2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgehrd.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zhseqr.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlacgv.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlacpy.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zladiv.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlahqr.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlahrd.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlange.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlanhs.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarf.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarfb.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarfg.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarft.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlarfx.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlascl.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlaset.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlassq.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlatrs.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztrevc.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zung2r.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zunghr.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zungqr.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgsyl.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zrot.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlatdf.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlacn2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgsy2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgexc.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zggbak.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgetc2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zhgeqz.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgges.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlaswp.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zdrscl.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zlartg.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zggbal.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgeqr2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgecon.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zunmqr.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zunm2r.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgeqrf.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgex2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgesc2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztgsen.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgghrd.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/zgees.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztrexc.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztrsen.c.o CMakeFiles/itkv3p_netlib.dir/lapack/complex16/ztrsyl.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgecon.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgeqr2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgeqrf.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgerq2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgesc2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgetc2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dggbak.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dggbal.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgges.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dgghrd.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dhgeqz.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlabad.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlacon.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlacpy.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dladiv.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlaev2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlag2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlagv2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlange.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlanhs.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlapy2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlapy3.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarf.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarfb.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarfg.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarft.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlartg.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlascl.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlaset.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlassq.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlasv2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlaswp.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlatdf.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlatrs.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dorg2r.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dorgqr.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dorgr2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dorm2r.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dormqr.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dormr2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/drscl.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dsptrf.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dsptrs.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dspr.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgex2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgexc.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgsen.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgsy2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dtgsyl.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlae2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlanst.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlarnv.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlaruv.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlasr.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dlasrt.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dsteqr.c.o CMakeFiles/itkv3p_netlib.dir/lapack/double/dzsum1.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/sgeqpf.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/sgeqr2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/sgerq2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/sggsvd.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/sggsvp.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slacpy.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slags2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slange.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slapll.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slapmt.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slapy2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slarf.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slarfg.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slartg.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slas2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slaset.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slassq.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/slasv2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/sorg2r.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/sorm2r.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/sormr2.c.o CMakeFiles/itkv3p_netlib.dir/lapack/single/stgsja.c.o CMakeFiles/itkv3p_netlib.dir/lapack/util/ieeeck.c.o CMakeFiles/itkv3p_netlib.dir/lapack/util/ilaenv.c.o CMakeFiles/itkv3p_netlib.dir/lapack/util/izmax1.c.o CMakeFiles/itkv3p_netlib.dir/lapack/util/lsame.c.o CMakeFiles/itkv3p_netlib.dir/napack/cg.c.o CMakeFiles/itkv3p_netlib.dir/minpack/dpmpar.c.o CMakeFiles/itkv3p_netlib.dir/minpack/enorm.c.o CMakeFiles/itkv3p_netlib.dir/minpack/fdjac2.c.o CMakeFiles/itkv3p_netlib.dir/minpack/lmder.c.o CMakeFiles/itkv3p_netlib.dir/minpack/lmder1.c.o CMakeFiles/itkv3p_netlib.dir/minpack/lmdif.c.o CMakeFiles/itkv3p_netlib.dir/minpack/lmpar.c.o CMakeFiles/itkv3p_netlib.dir/minpack/qrfac.c.o CMakeFiles/itkv3p_netlib.dir/minpack/qrsolv.c.o CMakeFiles/itkv3p_netlib.dir/opt/lbfgs.c.o CMakeFiles/itkv3p_netlib.dir/opt/lbfgsb.c.o CMakeFiles/itkv3p_netlib.dir/linalg/lsqrBase.cxx.o CMakeFiles/itkv3p_netlib.dir/linalg/lsqrDense.cxx.o CMakeFiles/itkv3p_netlib.dir/linalg/lsmrBase.cxx.o CMakeFiles/itkv3p_netlib.dir/linalg/lsmrDense.cxx.o CMakeFiles/itkv3p_netlib.dir/toms/rpoly.c.o CMakeFiles/itkv3p_netlib.dir/datapac/camsun.c.o CMakeFiles/itkv3p_netlib.dir/mathews/simpson.c.o CMakeFiles/itkv3p_netlib.dir/mathews/trapezod.c.o CMakeFiles/itkv3p_netlib.dir/mathews/adaquad.c.o CMakeFiles/itkv3p_netlib.dir/sparse/spAllocate.c.o CMakeFiles/itkv3p_netlib.dir/sparse/spBuild.c.o CMakeFiles/itkv3p_netlib.dir/sparse/spFactor.c.o CMakeFiles/itkv3p_netlib.dir/sparse/spSolve.c.o CMakeFiles/itkv3p_netlib.dir/sparse/spUtils.c.o CMakeFiles/itkv3p_netlib.dir/sparse/spOutput.c.o -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BinaryMinMaxCurvatureFlowImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/BinaryMinMaxCurvatureFlowImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3af68200199a35a11e4c241695dc6052" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib && /usr/bin/cmake -E cmake_symlink_library ../../../../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../../../../lib/libitkv3p_netlib-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BinaryThresholdImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 17%] Built target itkv3p_netlib make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingCastXML.dir/build.make Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BinaryThresholdImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/BinaryThresholdImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e7e04166aafd67837ffb46743c7aaf9e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/AnisotropicSmoothing/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAnisotropicSmoothingCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingCastXML.dir/build.make Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BinaryMedianImageFilter1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating ../../itkAnisotropicDiffusionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BinaryMedianImageFilter1.png -Dname=/<>/Testing/Data/Baseline/Filtering/BinaryMedianImageFilter1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a19507655e126432c3e8e949d87804b7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScalarImageToTextureFeaturesFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkScalarImageToTextureFeaturesFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BinaryMedianImageFilter2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating ../../itkCurvatureAnisotropicDiffusionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BinaryMedianImageFilter2.png -Dname=/<>/Testing/Data/Baseline/Filtering/BinaryMedianImageFilter2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/98f01b7e43bf85f2fe103b81652d2886" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BinaryMedianImageFilter3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BinaryMedianImageFilter3.png -Dname=/<>/Testing/Data/Baseline/Filtering/BinaryMedianImageFilter3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1afda6acd06f2d8967e87f892151aff3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VotingBinaryHoleFillingImageFilter1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VotingBinaryHoleFillingImageFilter1.png -Dname=/<>/Testing/Data/Baseline/Filtering/VotingBinaryHoleFillingImageFilter1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/77192d00fae1c4e520cf57aa515218a0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VotingBinaryHoleFillingImageFilter2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VotingBinaryHoleFillingImageFilter2.png -Dname=/<>/Testing/Data/Baseline/Filtering/VotingBinaryHoleFillingImageFilter2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ef403115c4e7b36183f3fa935b9caf40" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VotingBinaryHoleFillingImageFilter3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VotingBinaryHoleFillingImageFilter3.png -Dname=/<>/Testing/Data/Baseline/Filtering/VotingBinaryHoleFillingImageFilter3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9b949128d79440e659e86567d3dc5da4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VotingBinaryIterativeHoleFillingImageFilter1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMaskedImageToHistogramFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKStatistics.castxml.inc /<>/BUILD/Wrapping/itkMaskedImageToHistogramFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VotingBinaryIterativeHoleFillingImageFilter1.png -Dname=/<>/Testing/Data/Baseline/Filtering/VotingBinaryIterativeHoleFillingImageFilter1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1426f75596bcf064443347076406d774" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 17%] Built target ITKStatisticsCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBaseCastXML.dir/build.make Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBaseCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VotingBinaryIterativeHoleFillingImageFilter2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/ImageBase/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOImageBase /<>/BUILD/Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBaseCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOImageBaseCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBaseCastXML.dir/build.make Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBaseCastXML.dir/build make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VotingBinaryIterativeHoleFillingImageFilter2.png -Dname=/<>/Testing/Data/Baseline/Filtering/VotingBinaryIterativeHoleFillingImageFilter2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4f99871111a0e040a638367a62b74f44" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VotingBinaryIterativeHoleFillingImageFilter3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating ../../ITKIOImageBaseBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VotingBinaryIterativeHoleFillingImageFilter3.png -Dname=/<>/Testing/Data/Baseline/Filtering/VotingBinaryIterativeHoleFillingImageFilter3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bb3683a741e856c38242877da9053257" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BinomialBlurImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/BinomialBlurImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/BinomialBlurImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7f91ca5d1d312086617d49a9f4f108dc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Examples/Filtering/test/Baseline/CompositeFilterExample.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Examples/Filtering/test/Baseline/CompositeFilterExample.mha -Dname=/<>/Examples/Filtering/test/Baseline/CompositeFilterExample.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7ca37a75a13458c4b0df2f419619897c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/CurvatureAnisotropicDiffusionImageFilter.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/CurvatureAnisotropicDiffusionImageFilter.1.png -Dname=/<>/Testing/Data/Baseline/Filtering/CurvatureAnisotropicDiffusionImageFilter.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a088b72d4b320107cad67b7585535a78" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/CurvatureAnisotropicDiffusionImageFilter.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/CurvatureAnisotropicDiffusionImageFilter.2.png -Dname=/<>/Testing/Data/Baseline/Filtering/CurvatureAnisotropicDiffusionImageFilter.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f837bd39c911966a4ff7fe3b5b907d75" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/CurvatureAnisotropicDiffusionImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/CurvatureAnisotropicDiffusionImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/CurvatureAnisotropicDiffusionImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ecc4d2f2baca57da229d6c9957268df1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/CurvatureFlowImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/CurvatureFlowImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/CurvatureFlowImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/263314a8ce6b7f06f607fc83a0a1116f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/DanielssonDistanceMapImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/DanielssonDistanceMapImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/DanielssonDistanceMapImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d67977fa3447bbd0e7403eb881d772bf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/DiscreteGaussianImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/DiscreteGaussianImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/DiscreteGaussianImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7fdf02366c6d764545ff1b6e1f33f1c8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GradientAnisotropicDiffusionImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GradientAnisotropicDiffusionImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/GradientAnisotropicDiffusionImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3ab350b38d77adbed1d587b5dbadbf70" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GradientMagnitudeImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIndex.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkIndex.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating ../../itkMatrix.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GradientMagnitudeImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/GradientMagnitudeImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e37fee55dc68ca3eba2dd068ba511852" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkContinuousIndex.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkContinuousIndex.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GradientMagnitudeRecursiveGaussianImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating ../../itkVectorContainer.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GradientMagnitudeRecursiveGaussianImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/GradientMagnitudeRecursiveGaussianImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cf780f9561b1e9a605aed5d7188edf03" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/GradientRecursiveGaussianImageFilterTest.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBSplineBaseTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkBSplineBaseTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating ../../itkBSplineTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/GradientRecursiveGaussianImageFilterTest.mha -Dname=/<>/Testing/Data/Input/GradientRecursiveGaussianImageFilterTest.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/678ad4d0ec2b04cf4e79b0c0371a0894" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/DerivativeImageFilter.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/DerivativeImageFilter.mha -Dname=/<>/Testing/Data/Baseline/Filtering/DerivativeImageFilter.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a2165013ba8e1505a57e51073ab302d3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianImageFilter.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianImageFilter.1.png -Dname=/<>/Testing/Data/Baseline/Filtering/LaplacianImageFilter.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/845a5077fe66dab0bf21895660ec8bf5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianImageFilter.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianImageFilter.2.png -Dname=/<>/Testing/Data/Baseline/Filtering/LaplacianImageFilter.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/866c45d0204c2b679e9af75079ebfdd2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/LaplacianImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/dbc1fc667c2beb9784c9bb676dd34722" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianSharpeningImageFilter.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianSharpeningImageFilter.1.png -Dname=/<>/Testing/Data/Baseline/Filtering/LaplacianSharpeningImageFilter.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d338330f7bf7c20230a5c79570ef8765" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianSharpeningImageFilter.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianSharpeningImageFilter.2.png -Dname=/<>/Testing/Data/Baseline/Filtering/LaplacianSharpeningImageFilter.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bc9678bdf7d4f146a6b6db6b85a3a89e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianSharpeningImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianSharpeningImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/LaplacianSharpeningImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b6f6b91bce374de9988814fac90b8476" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/MathematicalMorphologyBinaryFiltersErode.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/MathematicalMorphologyBinaryFiltersErode.png -Dname=/<>/Testing/Data/Baseline/Filtering/MathematicalMorphologyBinaryFiltersErode.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6e12e4638905a3efd5d197ba1e03e25f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/MathematicalMorphologyGrayscaleFiltersErode.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/MathematicalMorphologyGrayscaleFiltersErode.png -Dname=/<>/Testing/Data/Baseline/Filtering/MathematicalMorphologyGrayscaleFiltersErode.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3afa269d764bdec3d5207be55efcd82e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/MeanImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/MeanImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/MeanImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/44464a307f128caa4db30add8b93193f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/MedianImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/MedianImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/MedianImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/aa55bd40e4bc0293a69cd388c533d3e4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilterTest1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilterTest1.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilterTest1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/84ec552555dc60e5fda3bbd6819f9fea" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleOrientedImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleOrientedImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleOrientedImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/416f2e1409153777fe43e0c1ca6f4017" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilterTest2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilterTest2.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilterTest2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/23b1ebdf872633dce8e66ef0655cbf14" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilterTest3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilterTest3.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilterTest3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4e7f6483ac6560e6d195ebd3745f1be5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilterTest4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilterTest4.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilterTest4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/84ec552555dc60e5fda3bbd6819f9fea" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test1.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/02c43aaf3c3c625fa4bdd5992c50f8ad" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test2.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/24106675afa04e74ea4cea0e2c06cb2f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test3.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/24106675afa04e74ea4cea0e2c06cb2f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test4.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0d4600a67572c5e88b5b1849613102ff" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test5.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test5.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter2Test5.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0d4600a67572c5e88b5b1849613102ff" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter3Test1PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter3Test1PixelCentered.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter3Test1PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e3847727717b849a08ec9b561512b01e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter4TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter4TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter4TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/103aaf475f261f9f6eda63b553e19ec0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter5TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter5TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter5TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d132b298b8df470689dd1e12f5597831" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter8TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter8TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter8TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a59f6b125070b7ac856e057a21a1fbf4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter9TestPixelCentered.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter9TestPixelCentered.1.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter9TestPixelCentered.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5f12321caf28dc38476ca6837060d1c2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter9TestPixelCentered.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter9TestPixelCentered.2.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter9TestPixelCentered.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/43e7bf82e86355babdbcbe598ab1a5a9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter9TestPixelCentered.3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter9TestPixelCentered.3.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter9TestPixelCentered.3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3978215a4bd58093ceae6888d6ea8525" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter9TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter9TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter9TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a2eb9116de0f28eb6c04049eca4ef19b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/ITKIOImageBaseBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOImageBase.castxml.inc /<>/BUILD/Wrapping/ITKIOImageBaseBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/SigmoidImageFilter.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating ../../itkImageFileReader.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/SigmoidImageFilter.1.png -Dname=/<>/Testing/Data/Baseline/Filtering/SigmoidImageFilter.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a603cf651ad795b1ea2efc5f86d15c23" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCurvatureAnisotropicDiffusionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKAnisotropicSmoothing.castxml.inc /<>/BUILD/Wrapping/itkCurvatureAnisotropicDiffusionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/SigmoidImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating ../../itkCenteredAffineTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBSplineTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkBSplineTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/SigmoidImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/SigmoidImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ccce23e181d19efa00c67d34afe8292a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating ../../itkCenteredEuler3DTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/SmoothingRecursiveGaussianImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/SmoothingRecursiveGaussianImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/SmoothingRecursiveGaussianImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cc322b2f8c749cce6ef383b00a73bb38" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/SmoothingRecursiveGaussianImageFilter2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMatrix.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkMatrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/SmoothingRecursiveGaussianImageFilter2.png -Dname=/<>/Testing/Data/Baseline/Filtering/SmoothingRecursiveGaussianImageFilter2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cc322b2f8c749cce6ef383b00a73bb38" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating ../../itkMapContainer.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ThresholdAboveImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ThresholdAboveImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/ThresholdAboveImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/42b21ffd144d0d792257a73e3726eb53" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ThresholdBelowImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ThresholdBelowImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/ThresholdBelowImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/fc91efb2a5d9fb52b1f941f43de36919" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ThresholdOutsideImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ThresholdOutsideImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/ThresholdOutsideImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5439ab852518262ced33f037147261b9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VectorGradientAnisotropicDiffusionImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VectorGradientAnisotropicDiffusionImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/VectorGradientAnisotropicDiffusionImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0fc723c396d61d90304f63c92c319cb0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VectorCurvatureAnisotropicDiffusionImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VectorCurvatureAnisotropicDiffusionImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/VectorCurvatureAnisotropicDiffusionImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0fc723c396d61d90304f63c92c319cb0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VectorIndexSelection.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/VectorIndexSelection.png -Dname=/<>/Testing/Data/Baseline/Filtering/VectorIndexSelection.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3bbf42b7c1c999f171b340b1498e8136" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ZeroCrossingBasedEdgeDetectionImageFilter1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ZeroCrossingBasedEdgeDetectionImageFilter1.png -Dname=/<>/Testing/Data/Baseline/Filtering/ZeroCrossingBasedEdgeDetectionImageFilter1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e81d6e05c2a7bf87367e9e118618db65" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/RGBGradientAnisotropicDiffusionImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/RGBGradientAnisotropicDiffusionImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/RGBGradientAnisotropicDiffusionImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/331127a37bf5c471b498091cea47c922" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/RGBCurvatureAnisotropicDiffusionImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/RGBCurvatureAnisotropicDiffusionImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/RGBCurvatureAnisotropicDiffusionImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/331127a37bf5c471b498091cea47c922" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/MorphologicalImageEnhancement.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/MorphologicalImageEnhancement.png -Dname=/<>/Testing/Data/Baseline/Filtering/MorphologicalImageEnhancement.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f366b6c8ece7012da7b00bf4b095b88d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/OtsuThresholdImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/OtsuThresholdImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/OtsuThresholdImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bbe4223d14bf4aa28c19e6f8f0546ecb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/OtsuMultipleThresholdOutput002.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/OtsuMultipleThresholdOutput002.png -Dname=/<>/Testing/Data/Baseline/Filtering/OtsuMultipleThresholdOutput002.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5788cabab5e807ffdf034d0a30dfa20e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/DigitallyReconstructedRadiograph1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/DigitallyReconstructedRadiograph1.png -Dname=/<>/Testing/Data/Baseline/Filtering/DigitallyReconstructedRadiograph1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ee87a6fdee961da3da7e8bd3700fea0c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/AntiAliasBinaryImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/AntiAliasBinaryImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/AntiAliasBinaryImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/92bb37ebe8e7f0572cf4137238f995cd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/CannyEdgeDetectionImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/CannyEdgeDetectionImageFilter.png -Dname=/<>/Testing/Data/Baseline/Filtering/CannyEdgeDetectionImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/825bab273b49ee1193dd44d43e5bc6e5" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/CannyEdgeDetectionImageFilter2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/CannyEdgeDetectionImageFilter2.png -Dname=/<>/Testing/Data/Baseline/Filtering/CannyEdgeDetectionImageFilter2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/945eaaff0c5b550f3a60a50d5b55b788" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/FlipImageFilterX.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/FlipImageFilterX.png -Dname=/<>/Testing/Data/Baseline/Filtering/FlipImageFilterX.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f1c026ea6148beb013f98bb283cb67cd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/FlipImageFilterY.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/FlipImageFilterY.png -Dname=/<>/Testing/Data/Baseline/Filtering/FlipImageFilterY.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e4d8170b1c793c27f77da86242e257d3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/FlipImageFilterXY.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/FlipImageFilterXY.png -Dname=/<>/Testing/Data/Baseline/Filtering/FlipImageFilterXY.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/976e47e93e7c5d94115e208ca8caba39" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GaussianBlurImageFunction.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/GaussianBlurImageFunction.mha -Dname=/<>/Testing/Data/Baseline/Filtering/GaussianBlurImageFunction.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a4fbf4a44162371d8967b4b8d48d40ef" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/FFTImageFilterReal.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/FFTImageFilterReal.png -Dname=/<>/Testing/Data/Baseline/Filtering/FFTImageFilterReal.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/299766652a4b13155837350d6d428323" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/RGBToGrayscale.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/RGBToGrayscale.png -Dname=/<>/Testing/Data/Baseline/Filtering/RGBToGrayscale.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3411477dcace0ac18842ade9fbc32e05" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianRecursiveGaussianImageFilter1.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianRecursiveGaussianImageFilter1.mha -Dname=/<>/Testing/Data/Baseline/Filtering/LaplacianRecursiveGaussianImageFilter1.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/20e066217a52c76c9c5f1d60e6bd27a9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianRecursiveGaussianImageFilter2.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/LaplacianRecursiveGaussianImageFilter2.mha -Dname=/<>/Testing/Data/Baseline/Filtering/LaplacianRecursiveGaussianImageFilter2.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/673eaefa3e29130646200770ddfce164" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter6PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter6PixelCentered.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter6PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ebc6f82318338cd6f711b49be667f55f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter7PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleImageFilter7PixelCentered.png -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleImageFilter7PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e5d4b17457dc4003f8634e3a9d649b67" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleVolumesToBeIsotropic.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ResampleVolumesToBeIsotropic.mha -Dname=/<>/Testing/Data/Baseline/Filtering/ResampleVolumesToBeIsotropic.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cfcaa5ef5ce86ba02ccf96b2a064400c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ScaleSpaceGenerator2D005.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ScaleSpaceGenerator2D005.mhd -Dname=/<>/Testing/Data/Baseline/Filtering/ScaleSpaceGenerator2D005.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5a671e4635422f7e13f2f32e4b0ccf86" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 17%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ScaleSpaceGenerator2D005.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/ScaleSpaceGenerator2D005.raw -Dname=/<>/Testing/Data/Baseline/Filtering/ScaleSpaceGenerator2D005.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e51095c437fca9daa829d657f639e3cc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCenteredEuler3DTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkCenteredEuler3DTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 18%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/SubsampleVolume.mha make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 18%] Generating ../../itkCenteredRigid2DTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/SubsampleVolume.mha -Dname=/<>/Testing/Data/Baseline/Filtering/SubsampleVolume.mha -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/197872e7d11a9e1f8cb49d1158acbd70" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 18%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/Tensors.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorContainer.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkVectorContainer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkBoundingBox.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/Tensors.mhd -Dname=/<>/Testing/Data/Baseline/Filtering/Tensors.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3ee9091197d56f7d37cf0b7100fb62fc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCenteredAffineTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkCenteredAffineTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/Tensors.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkCenteredSimilarity2DTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/Tensors.raw -Dname=/<>/Testing/Data/Baseline/Filtering/Tensors.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ca529a55c900a1aefc8b8eb8c923972f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/FACorpusCallosum.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/FACorpusCallosum.mhd -Dname=/<>/Testing/Data/Baseline/Filtering/FACorpusCallosum.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/85b9fa24cdd93226737e64c81c85aeb0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/FACorpusCallosum.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/FACorpusCallosum.raw -Dname=/<>/Testing/Data/Baseline/Filtering/FACorpusCallosum.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b98432aa385ed427286f058038c0d3c7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/RACorpusCallosum.mhd make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/RACorpusCallosum.mhd -Dname=/<>/Testing/Data/Baseline/Filtering/RACorpusCallosum.mhd -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/20e16805cdebaa24f6c827c7a3cd8256" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/RACorpusCallosum.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Filtering/RACorpusCallosum.raw -Dname=/<>/Testing/Data/Baseline/Filtering/RACorpusCallosum.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/74c424ecb9dfec1f7dbd48a411f6fdb6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/DwiCorpusCallosum.nhdr make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/DwiCorpusCallosum.nhdr -Dname=/<>/Testing/Data/Input/DwiCorpusCallosum.nhdr -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c8bcd60fd2f727edf37e374ab3d385f2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/DwiCorpusCallosum.raw make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/DwiCorpusCallosum.raw -Dname=/<>/Testing/Data/Input/DwiCorpusCallosum.raw -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4ab3c38b9b80907588258a68d0b8da56" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Examples/IO/test/Baseline/DicomSliceReadPythonOutputBaseline.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Examples/IO/test/Baseline/DicomSliceReadPythonOutputBaseline.png -Dname=/<>/Examples/IO/test/Baseline/DicomSliceReadPythonOutputBaseline.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9e880269bfbfdf952da80c3cd937bef3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ConfidenceConnectedWhiteTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ConfidenceConnectedWhiteTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ConfidenceConnectedWhiteTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/82c3bf94c9423ddcdfb76a5f791a26ec" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ConfidenceConnectedVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ConfidenceConnectedVentricleTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ConfidenceConnectedVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c779a27aaa2aea6ac63498bbae25b838" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ConfidenceConnectedGrayTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMapContainer.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkMapContainer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ConfidenceConnectedGrayTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ConfidenceConnectedGrayTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a3ff8472da13648909f0f3633233f55e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkRGBPixel.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ConnectedThresholdWhiteTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ConnectedThresholdWhiteTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ConnectedThresholdWhiteTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ee978b644dafb6f52083869e0920d3bf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ConnectedThresholdVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ConnectedThresholdVentricleTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ConnectedThresholdVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e4808f8ddb4e25e2a4ea63c695925633" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ConnectedThresholdGrayTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ConnectedThresholdGrayTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ConnectedThresholdGrayTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/eba193afd20645130a0f677eae771247" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingLeftVentricleTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageFileReader.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOImageBase.castxml.inc /<>/BUILD/Wrapping/itkImageFileReader.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingLeftVentricleTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/FastMarchingLeftVentricleTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/71d701a98fe6aee829feefeebe561056" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkImageFileWriter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingLeftVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingLeftVentricleTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/FastMarchingLeftVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b53bd1eccf764bc8471b9d4527970e87" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingRightVentricleTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingRightVentricleTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/FastMarchingRightVentricleTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/52e9833222c0cc15cae0b103971edd0f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingRightVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingRightVentricleTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/FastMarchingRightVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d47267e9ee7f9474cfe7c563c7c0cc79" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingWhiteMatterTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingWhiteMatterTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/FastMarchingWhiteMatterTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d8b9906d5300d7a8b4379380e83a9a30" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingWhiteMatterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingWhiteMatterTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/FastMarchingWhiteMatterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c21eefcba513f6c291a4c56e41d0424e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingGrayMatterTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingGrayMatterTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/FastMarchingGrayMatterTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2784edac368e998f67ce77f5e7fe4c38" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingGrayMatterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/FastMarchingGrayMatterTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/FastMarchingGrayMatterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5b8d6568fd95c4eeff49e5647ab38264" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourLeftVentricleTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourLeftVentricleTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/GeodesicActiveContourLeftVentricleTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7ea869619d693d921c870c8f41ef0182" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourLeftVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourLeftVentricleTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/GeodesicActiveContourLeftVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0e530c5d9b6b5b2fee1a9f1990dd1e93" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourRightVentricleTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourRightVentricleTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/GeodesicActiveContourRightVentricleTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4913e26b691956f59bee8e33dfb90ece" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourRightVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAnisotropicDiffusionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKAnisotropicSmoothing.castxml.inc /<>/BUILD/Wrapping/itkAnisotropicDiffusionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourRightVentricleTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/GeodesicActiveContourRightVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7e18e5ec5a608e5e9020140922be85de" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkGradientAnisotropicDiffusionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourWhiteMatterTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourWhiteMatterTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/GeodesicActiveContourWhiteMatterTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3c45aa90896157cd630f7a01ef404f7b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourWhiteMatterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourWhiteMatterTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/GeodesicActiveContourWhiteMatterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b633df1e1d5a915fbd8601cbba3bdd25" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourGrayMatterTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourGrayMatterTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/GeodesicActiveContourGrayMatterTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/79bc6403542067f5160b555d01195849" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourGrayMatterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourGrayMatterTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/GeodesicActiveContourGrayMatterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9ac38e63cf619bf2fb348a3bb5b03324" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetRightVentricleTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetRightVentricleTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetRightVentricleTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/60e8a985d582f063d43f503c75214a56" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetRightVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetRightVentricleTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetRightVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/293aca58abe6621b39168042c0fb8110" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetWhiteMatterTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCenteredRigid2DTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkCenteredRigid2DTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetWhiteMatterTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetWhiteMatterTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bba31c90f6a6e34857cb2f05df7097f0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkElasticBodyReciprocalSplineKernelTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetWhiteMatterTest.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetWhiteMatterTest.2.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetWhiteMatterTest.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/afa2b524d4938dc039ac0c24a7418cd3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetWhiteMatterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetWhiteMatterTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetWhiteMatterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6d19e7138b572b4a3d15bb8c3a17745f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetGrayMatterTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCenteredSimilarity2DTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkCenteredSimilarity2DTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetGrayMatterTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetGrayMatterTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/81ab62913a8ceeb3c3385f94eee0e2b0" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkElasticBodySplineKernelTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetGrayMatterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetGrayMatterTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ShapeDetectionLevelSetGrayMatterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/dd5f2e941b833c9addb9c43ae21d4e59" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetVentricleTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetVentricleTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetVentricleTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/61520e7ef3a1b2bdc4a3dfaf2f8cc9ff" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetVentricleTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/859a9c820427e648a78bce075d23f0a3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetWhiteMatterTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBoundingBox.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkBoundingBox.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRGBPixel.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkRGBPixel.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkRGBAPixel.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetWhiteMatterTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetWhiteMatterTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/979212ecbf5d7092d7a517e785737cb8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkVariableLengthVector.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetWhiteMatterTest.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetWhiteMatterTest.2.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetWhiteMatterTest.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/565366687d920ebfd43275407194f2be" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetWhiteMatterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetWhiteMatterTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetWhiteMatterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b2d1cef3cf76c546b9af86783c2fc0d6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetGrayMatterTest.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetGrayMatterTest.1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetGrayMatterTest.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cae7d7f9d8516672778ba611fa8f2c5a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetGrayMatterTest.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetGrayMatterTest.2.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetGrayMatterTest.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4f04c6c7a30bcfb4d4586c6de9d46bbb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetGrayMatterTest.3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetGrayMatterTest.3.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetGrayMatterTest.3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9f6a34380d988d19b0b2c459438c9a15" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetGrayMatterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetGrayMatterTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetGrayMatterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/11d47316c4da6d0878969fe9f473c17b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/VectorConfidenceConnected1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/VectorConfidenceConnected1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/VectorConfidenceConnected1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f6c3ce5d4a78d25e39d84f79ac81cdae" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/VectorConfidenceConnected2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/VectorConfidenceConnected2.png -Dname=/<>/Testing/Data/Baseline/Segmentation/VectorConfidenceConnected2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4aefb11bc7936372a2c5b87f8e929daa" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/VectorConfidenceConnected3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/VectorConfidenceConnected3.png -Dname=/<>/Testing/Data/Baseline/Segmentation/VectorConfidenceConnected3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/94aac415408c8d775f068ac474d99e15" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/CannySegmentationLevelSetImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/CannySegmentationLevelSetImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/CannySegmentationLevelSetImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/283619e0170ad2ec78b0cd2a8fca5f26" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetVentricle.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetVentricle.png -Dname=/<>/Testing/Data/Baseline/Segmentation/ThresholdSegmentationLevelSetVentricle.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/371bdc975c8f58446cb1370130f4f4ef" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourShapePriorCallosumTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/GeodesicActiveContourShapePriorCallosumTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/GeodesicActiveContourShapePriorCallosumTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/489eb792322585ba93e3124b3216fda7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/NeighborhoodConnectedWhiteTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/NeighborhoodConnectedWhiteTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/NeighborhoodConnectedWhiteTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/df7c8c0ef75717e59d7bf155cfa76706" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/NeighborhoodConnectedVentricleTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/NeighborhoodConnectedVentricleTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/NeighborhoodConnectedVentricleTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/45ccb7645b5df83bfdd6dba32d8df730" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/NeighborhoodConnectedGrayTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/NeighborhoodConnectedGrayTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/NeighborhoodConnectedGrayTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/52f7bffb5d1b192f105d5d9ccdc1f2ca" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/IsolatedConnectedTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/IsolatedConnectedTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/IsolatedConnectedTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ee978b644dafb6f52083869e0920d3bf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/RelabelComponentImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/RelabelComponentImageFilter.png -Dname=/<>/Testing/Data/Baseline/Segmentation/RelabelComponentImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/bcf7707c10a73cf628298a8d56c735b2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/WatershedSegmentation1Test1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/WatershedSegmentation1Test1.png -Dname=/<>/Testing/Data/Baseline/Segmentation/WatershedSegmentation1Test1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/02b3311b5b3ad57385739a725e54f84c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/WatershedSegmentation1Test2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/WatershedSegmentation1Test2.png -Dname=/<>/Testing/Data/Baseline/Segmentation/WatershedSegmentation1Test2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/75f64def0fba6985b96c5c0863ede58a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/CurvesLevelSetImageFilterTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/CurvesLevelSetImageFilterTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/CurvesLevelSetImageFilterTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0e530c5d9b6b5b2fee1a9f1990dd1e93" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/HoughTransformTwoLinesTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/HoughTransformTwoLinesTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/HoughTransformTwoLinesTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/213f0c45c28b08e9e5378a6461c21229" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/HoughTransformTwoCirclesTest.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/HoughTransformTwoCirclesTest.png -Dname=/<>/Testing/Data/Baseline/Segmentation/HoughTransformTwoCirclesTest.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e90ba239ce39a18e05adc0d0ea1a5d35" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/LaplacianSegmentationLevelSetImageFilter.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Segmentation/LaplacianSegmentationLevelSetImageFilter.png -Dname=/<>/Testing/Data/Baseline/Segmentation/LaplacianSegmentationLevelSetImageFilter.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/36d7a9d90bea0b009c1a069c36df0dc9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Statistics/ScalarImageKmeansClassifierOutput.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Statistics/ScalarImageKmeansClassifierOutput.png -Dname=/<>/Testing/Data/Baseline/Statistics/ScalarImageKmeansClassifierOutput.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/73a6e189a50a0cf5d6ebf1b09e2e41d9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Statistics/ScalarImageMarkovRandomField1Output.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Statistics/ScalarImageMarkovRandomField1Output.png -Dname=/<>/Testing/Data/Baseline/Statistics/ScalarImageMarkovRandomField1Output.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5a4f197e05eaeedd822c5d5102dcc3c2" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Input/Statistics/BrainT1Slice_AfterKMeansClassification.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Input/Statistics/BrainT1Slice_AfterKMeansClassification.png -Dname=/<>/Testing/Data/Input/Statistics/BrainT1Slice_AfterKMeansClassification.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/9bd6bcb82c0f55970d3f01879914ad06" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Statistics/BayesianClassifierInitializerClass2Output.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageFileWriter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOImageBase.castxml.inc /<>/BUILD/Wrapping/itkImageFileWriter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Statistics/BayesianClassifierInitializerClass2Output.png -Dname=/<>/Testing/Data/Baseline/Statistics/BayesianClassifierInitializerClass2Output.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/85661ff04a90cb6fc505ecd1ae35660d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkImageSeriesReader.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Statistics/BayesianClassifierLabelMap.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Statistics/BayesianClassifierLabelMap.png -Dname=/<>/Testing/Data/Baseline/Statistics/BayesianClassifierLabelMap.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/db2bccff74a4456c841d2bd2b7fb717b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/JointEntropyHistogramAfterRegistration.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/JointEntropyHistogramAfterRegistration.1.png -Dname=/<>/Testing/Data/Baseline/Registration/JointEntropyHistogramAfterRegistration.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ce8a777b753d31e2cf8555555da723b4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/JointEntropyHistogramAfterRegistration.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/JointEntropyHistogramAfterRegistration.png -Dname=/<>/Testing/Data/Baseline/Registration/JointEntropyHistogramAfterRegistration.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/77efce1a1f2991f7562192e493ad43f7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration1TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration1TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration1TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4d13deb467baaee980d619b89e0b0a9c" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration2Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration2Test.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration2Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/04477843efce04215bccf512abbf809d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVariableLengthVector.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkVariableLengthVector.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration3TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkImageRegion.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration3TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration3TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/15f65753697d4ceb1aaa774db0842475" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration4Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration4Test.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration4Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/1fa40e8d13e22f06fefb518a9115acbd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration5Test1PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration5Test1PixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration5Test1PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/7a3501235a5359db6fd15b21038231bd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration5Test2PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration5Test2PixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration5Test2PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/2302726b4160da84a3dcfa7036e81821" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration6TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration6TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration6TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/29505655700f5af6a7908d98247ca45f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration7TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRGBAPixel.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkRGBAPixel.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration7TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration7TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/16c7cde73d4eef0319f1740905f87eb1" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkSymmetricSecondRankTensor.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration9TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration9TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration9TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4413661f4e06a5712b53c73c6c4f1e1d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration10TestPixelCentered.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkElasticBodyReciprocalSplineKernelTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkElasticBodyReciprocalSplineKernelTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration10TestPixelCentered.1.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration10TestPixelCentered.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/5dc3f3df0b44cd2c5cfb37377a6912c4" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration10TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkFixedCenterOfRotationAffineTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration10TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration10TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/665cf3d6aa9adab209c1f228d1d48bad" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration13TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration13TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration13TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8a7e3c0132942abfe10f7110381cbeb7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration14Test.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration14Test.1.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration14Test.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/4e84ef3e23712050616cb712be7fbc1a" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration14Test.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkElasticBodySplineKernelTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkElasticBodySplineKernelTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkIdentityTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration14Test.2.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration14Test.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c58fe9e5237dcee63151788cf5679b25" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration14Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGradientAnisotropicDiffusionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKAnisotropicSmoothing.castxml.inc /<>/BUILD/Wrapping/itkGradientAnisotropicDiffusionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating ../../itkVectorCurvatureAnisotropicDiffusionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration14Test.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration14Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/a2b5ae466f56ea1f20f42321f13f365d" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration15TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration15TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration15TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/90d2af8922430d3aff4732a1691b6808" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration16TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration16TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration16TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/774ff2fc9fa280a2732a51303ae27d3e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration17TestPixelCentered.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration17TestPixelCentered.1.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration17TestPixelCentered.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/c06041fb110baf059c632f1668836efc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration17TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration17TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration17TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/82d146ff33a7fcea8222501cf5ed4715" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration1Test.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration1Test.1.png -Dname=/<>/Testing/Data/Baseline/Registration/MultiResImageRegistration1Test.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ac74415c7fa144eb80d41a2b4acb1113" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration1Test.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration1Test.2.png -Dname=/<>/Testing/Data/Baseline/Registration/MultiResImageRegistration1Test.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f872cb6c31f9e3574c02355da71cffef" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration1Test.3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration1Test.3.png -Dname=/<>/Testing/Data/Baseline/Registration/MultiResImageRegistration1Test.3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e0745a54105577c0648f5f8bc232f2b9" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration1Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration1Test.png -Dname=/<>/Testing/Data/Baseline/Registration/MultiResImageRegistration1Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b3bcfba32ba6c697805638ac05c92335" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 19%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration2Test.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration2Test.1.png -Dname=/<>/Testing/Data/Baseline/Registration/MultiResImageRegistration2Test.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/92e1d84aa810f9f6f3b586656dd75b55" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration2Test.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration2Test.2.png -Dname=/<>/Testing/Data/Baseline/Registration/MultiResImageRegistration2Test.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/8a321be8b2ced6b7a237961e03c3f6ba" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration2Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/MultiResImageRegistration2Test.png -Dname=/<>/Testing/Data/Baseline/Registration/MultiResImageRegistration2Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/74e4a1713fb91ab5dcb9e79624d9b5cc" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration2Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration2Test.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration2Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e0292ca1360ffce5e6d5a5c075f40ccb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.1.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration3Test.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/abced2727050c75f28c3aa43b657ca00" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.2.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration3Test.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/d9e477dff499f96a5586f04303e53c04" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.3.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration3Test.3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/536be1f11fe96cdd05e58f034bb30aa3" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.4.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration3Test.4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/ad6e8ba25f130755d0057daf5c40680b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.5.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageRegion.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkImageRegion.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImage.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.5.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration3Test.5.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6c49c13437c8efca38853c1b334f8f84" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.6.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.6.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration3Test.6.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/3ac354bc83efb69dac84156ae158644b" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration3Test.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration3Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/0914362a0f72308e880b6faf0e8bf831" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration1v4Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration1v4Test.png -Dname=/<>/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration1v4Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/f09d67fce207a3f52e0f3e0c0d35bbcd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.1.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.1.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration5Test.1.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/6e094a742c77d0fe628c1a407c4439a7" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.2.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.2.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration5Test.2.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/b9415b821421bb8be4def9aa4c0b3992" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.3.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.3.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration5Test.3.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/201d2b4cc8b069c3798e9a165b65ad0e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.4.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.4.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration5Test.4.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/17ac47756c9dd2119208b4e9503318f8" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.5.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.5.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration5Test.5.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/41264e5d94a83ed16d44d0856410bb40" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.6.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.6.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration5Test.6.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/42d15c4ae06437fe7d37fd000ced5c6e" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/DeformableRegistration5Test.png -Dname=/<>/Testing/Data/Baseline/Registration/DeformableRegistration5Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/46cc38f3413989b9f1d73325c08aa81f" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/BSplineWarping1Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/BSplineWarping1Test.png -Dname=/<>/Examples/RegistrationITKv4/test/Baseline/BSplineWarping1Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cd6311a99be017655a88ef869488f1dd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration12Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSymmetricSecondRankTensor.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkSymmetricSecondRankTensor.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration12Test.png -Dname=/<>/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration12Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/73c4f57340d1c4f15e04b3c79a31c7f6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkVectorImage.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFixedCenterOfRotationAffineTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkFixedCenterOfRotationAffineTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration13Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkQuaternionRigidTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration13Test.png -Dname=/<>/Examples/RegistrationITKv4/test/Baseline/DeformableRegistration13Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/da24b237f30c5f16251ec223d0654c11" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/LandmarkWarping2Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/LandmarkWarping2Test.png -Dname=/<>/Testing/Data/Baseline/Registration/LandmarkWarping2Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/84d6cd7a14b825716fbe5f40e1ccc8fb" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration12TestPixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ImageRegistration12TestPixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ImageRegistration12TestPixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/88285a115d88220eb4e9c2da64ec8356" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ITKv3ImageRegistration4Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ITKv3ImageRegistration4Test.png -Dname=/<>/Testing/Data/Baseline/Registration/ITKv3ImageRegistration4Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/e85b80d08a9e285d3fba75a81e6f5bde" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ITKv3ImageRegistration5Test2PixelCentered.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Testing/Data/Baseline/Registration/ITKv3ImageRegistration5Test2PixelCentered.png -Dname=/<>/Testing/Data/Baseline/Registration/ITKv3ImageRegistration5Test2PixelCentered.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/baebc6fbf4aeafd1e094f0c1ee7b7acf" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Examples/RegistrationITKv3/test/Baseline/BSplineWarping1Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Examples/RegistrationITKv3/test/Baseline/BSplineWarping1Test.png -Dname=/<>/Examples/RegistrationITKv3/test/Baseline/BSplineWarping1Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/cd6311a99be017655a88ef869488f1dd" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Examples/RegistrationITKv3/test/Baseline/DeformableRegistration12Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Examples/RegistrationITKv3/test/Baseline/DeformableRegistration12Test.png -Dname=/<>/Examples/RegistrationITKv3/test/Baseline/DeformableRegistration12Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/73c4f57340d1c4f15e04b3c79a31c7f6" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating /<>/BUILD/ExternalData/Examples/RegistrationITKv3/test/Baseline/DeformableRegistration13Test.png make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' /usr/bin/cmake -Drelative_top=/<>/BUILD -Dfile=/<>/BUILD/ExternalData/Examples/RegistrationITKv3/test/Baseline/DeformableRegistration13Test.png -Dname=/<>/Examples/RegistrationITKv3/test/Baseline/DeformableRegistration13Test.png -Dexts=.md5+.sha512 -DExternalData_ACTION=fetch -DExternalData_CONFIG=/<>/BUILD/ITKData_config.cmake -P /<>/CMake/ExternalData.cmake -- Found object: "/<>/data/.ExternalData/MD5/da24b237f30c5f16251ec223d0654c11" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIdentityTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkIdentityTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPadImageFilterBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkPadImageFilterBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPadImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBSplineDownsampleImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorImage.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkVectorImage.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkNeighborhood.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageSeriesReader.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOImageBase.castxml.inc /<>/BUILD/Wrapping/itkImageSeriesReader.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageSeriesWriter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImage.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkImage.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageSourceCommon.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkQuaternionRigidTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkQuaternionRigidTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkRigid2DTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNeighborhood.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkNeighborhood.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageSource.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBSplineDownsampleImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkBSplineDownsampleImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBSplineUpsampleImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageSourceCommon.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkImageSourceCommon.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageToImageFilterCommon.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRigid2DTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkRigid2DTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkRigid3DPerspectiveTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorCurvatureAnisotropicDiffusionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKAnisotropicSmoothing.castxml.inc /<>/BUILD/Wrapping/itkVectorCurvatureAnisotropicDiffusionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkVectorGradientAnisotropicDiffusionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageSeriesWriter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOImageBase.castxml.inc /<>/BUILD/Wrapping/itkImageSeriesWriter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKIOImageBaseCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPCastXML.dir/build.make Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BMP/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOBMP /<>/BUILD/Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBMPCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPCastXML.dir/build.make Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBMPImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPadImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkPadImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBinShrinkImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageToImageFilterCommon.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkImageToImageFilterCommon.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageToImageFilterA.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRigid3DPerspectiveTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkRigid3DPerspectiveTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkRigid3DTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBSplineUpsampleImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkBSplineUpsampleImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkChangeInformationImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageSource.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkImageSource.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageToImageFilterB.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOBMP && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBMPImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOBMP.castxml.inc /<>/BUILD/Wrapping/itkBMPImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKIOBMPCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMCastXML.dir/build.make Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GDCM/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOGDCM /<>/BUILD/Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGDCMCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMCastXML.dir/build.make Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkGDCMImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRigid3DTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkRigid3DTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkScaleLogarithmicTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinShrinkImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkBinShrinkImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkConstantPadImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageToImageFilterA.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkImageToImageFilterA.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkInPlaceImageFilterA.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkChangeInformationImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkChangeInformationImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkCropImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScaleLogarithmicTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkScaleLogarithmicTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkScaleSkewVersor3DTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGDCM && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGDCMImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOGDCM.castxml.inc /<>/BUILD/Wrapping/itkGDCMImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKIOGDCMCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLCastXML.dir/build.make Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GIPL/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOGIPL /<>/BUILD/Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGIPLCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLCastXML.dir/build.make Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkGiplImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageToImageFilterB.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkImageToImageFilterB.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkInPlaceImageFilterB.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorGradientAnisotropicDiffusionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKAnisotropicSmoothing.castxml.inc /<>/BUILD/Wrapping/itkVectorGradientAnisotropicDiffusionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKAnisotropicSmoothingCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGCastXML.dir/build.make Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/JPEG/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOJPEG /<>/BUILD/Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOJPEGCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGCastXML.dir/build.make Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkJPEGImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScaleSkewVersor3DTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkScaleSkewVersor3DTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkScaleVersor3DTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkInPlaceImageFilterA.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkInPlaceImageFilterA.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkDefaultDynamicMeshTraits.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGIPL && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGiplImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOGIPL.castxml.inc /<>/BUILD/Wrapping/itkGiplImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKIOGIPLCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaCastXML.dir/build.make Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Meta/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOMeta /<>/BUILD/Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMetaCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaCastXML.dir/build.make Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMetaImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOJPEG && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkJPEGImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOJPEG.castxml.inc /<>/BUILD/Wrapping/itkJPEGImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKIOJPEGCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTICastXML.dir/build.make Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTICastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NIFTI/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIONIFTI /<>/BUILD/Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTICastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONIFTICastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTICastXML.dir/build.make Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTICastXML.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkConstantPadImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkConstantPadImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkCyclicShiftImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkNiftiImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScaleVersor3DTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkScaleVersor3DTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkThinPlateR2LogRSplineKernelTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCropImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkCropImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkExpandImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDefaultDynamicMeshTraits.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkDefaultDynamicMeshTraits.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkDefaultStaticMeshTraits.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkInPlaceImageFilterB.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkInPlaceImageFilterB.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkFunctionBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOMeta && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMetaImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOMeta.castxml.inc /<>/BUILD/Wrapping/itkMetaImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKIOMetaCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDCastXML.dir/build.make Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NRRD/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIONRRD /<>/BUILD/Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONRRDCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDCastXML.dir/build.make Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkNrrdImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDefaultStaticMeshTraits.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkDefaultStaticMeshTraits.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkArray2D.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIONIFTI && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNiftiImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIONIFTI.castxml.inc /<>/BUILD/Wrapping/itkNiftiImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKIONIFTICastXML make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkThinPlateR2LogRSplineKernelTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkThinPlateR2LogRSplineKernelTransform.cxx make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGCastXML.dir/build.make Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkThinPlateSplineKernelTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/PNG/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOPNG /<>/BUILD/Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOPNGCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGCastXML.dir/build.make Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPNGImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkExpandImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkExpandImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkFlipImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFunctionBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkFunctionBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBSplineInterpolationWeightFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCyclicShiftImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkCyclicShiftImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkInterpolateImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkArray2D.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkArray2D.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkDiffusionTensor3D.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIONRRD && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNrrdImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIONRRD.castxml.inc /<>/BUILD/Wrapping/itkNrrdImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKIONRRDCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFCastXML.dir/build.make Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TIFF/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOTIFF /<>/BUILD/Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTIFFCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFCastXML.dir/build.make Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkTIFFImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkThinPlateSplineKernelTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkThinPlateSplineKernelTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkTranslationTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOPNG && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPNGImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOPNG.castxml.inc /<>/BUILD/Wrapping/itkPNGImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKIOPNGCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKCastXML.dir/build.make Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/VTK/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOVTK /<>/BUILD/Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOVTKCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKCastXML.dir/build.make Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkVTKImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBSplineInterpolationWeightFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkBSplineInterpolationWeightFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkExtractImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKData make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelCastXML.dir/build.make Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/TestKernel/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKTestKernel /<>/BUILD/Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTestKernelCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelCastXML.dir/build.make Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkComparisonImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFlipImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkFlipImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMirrorPadImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDiffusionTensor3D.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkDiffusionTensor3D.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageBoundaryCondition.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTranslationTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkTranslationTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkVolumeSplineKernelTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkInterpolateImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkInterpolateImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkOrientImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTIFF && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTIFFImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOTIFF.castxml.inc /<>/BUILD/Wrapping/itkTIFFImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKIOTIFFCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapCastXML.dir/build.make Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/LabelMap/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKLabelMap /<>/BUILD/Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelMapCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapCastXML.dir/build.make Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkLabelObjectLine.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOVTK && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVTKImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOVTK.castxml.inc /<>/BUILD/Wrapping/itkVTKImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKIOVTKCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposeCastXML.dir/build.make Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposeCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageCompose/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageCompose /<>/BUILD/Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposeCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageComposeCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposeCastXML.dir/build.make Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposeCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkComposeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTestKernel && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkComparisonImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTestKernel.castxml.inc /<>/BUILD/Wrapping/itkComparisonImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPipelineMonitorImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageBoundaryCondition.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkImageBoundaryCondition.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageDuplicator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkExtractImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkExtractImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelObjectLine.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelObjectLine.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageTransformer.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVolumeSplineKernelTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTransform.castxml.inc /<>/BUILD/Wrapping/itkVolumeSplineKernelTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkLabelObject.xml make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKTransformCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshCastXML.dir/build.make Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Mesh/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKMesh /<>/BUILD/Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMeshCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshCastXML.dir/build.make Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMeshBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkOrientImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkOrientImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPasteImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMirrorPadImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkMirrorPadImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPermuteAxesImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageDuplicator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkImageDuplicator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImportImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompose && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkComposeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageCompose.castxml.inc /<>/BUILD/Wrapping/itkComposeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkJoinSeriesImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTestKernel && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPipelineMonitorImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTestKernel.castxml.inc /<>/BUILD/Wrapping/itkPipelineMonitorImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkRandomImageSource.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkShapeLabelObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageTransformer.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkImageTransformer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkKernelFunctionBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPermuteAxesImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkPermuteAxesImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkRegionOfInterestImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImportImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkImportImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPasteImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkPasteImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMetaDataObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkResampleImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompose && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkJoinSeriesImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageCompose.castxml.inc /<>/BUILD/Wrapping/itkJoinSeriesImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKImageComposeCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsCastXML.dir/build.make Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/SpatialObjects/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKSpatialObjects /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSpatialObjectsCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsCastXML.dir/build.make Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkSpatialObjectProperty.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkKernelFunctionBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkKernelFunctionBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMinimumMaximumImageCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTestKernel && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRandomImageSource.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKTestKernel.castxml.inc /<>/BUILD/Wrapping/itkRandomImageSource.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKTestKernelCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsCastXML.dir/build.make Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageStatistics/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageStatistics /<>/BUILD/Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageStatisticsCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsCastXML.dir/build.make Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkAccumulateImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShapeLabelObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkShapeLabelObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkStatisticsLabelObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRegionOfInterestImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkRegionOfInterestImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkShrinkImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMetaDataObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkMetaDataObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkNumericTraits.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSpatialObjectProperty.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkSpatialObjectProperty.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkAffineGeometryFrame.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMeshBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMesh.castxml.inc /<>/BUILD/Wrapping/itkMeshBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMeshSource.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMinimumMaximumImageCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkMinimumMaximumImageCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkOptimizerParameters.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAccumulateImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkAccumulateImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkAdaptiveHistogramEqualizationImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShrinkImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkShrinkImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkSliceBySliceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStatisticsLabelObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkStatisticsLabelObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../ITKLabelMapBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNumericTraits.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkNumericTraits.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPointSet.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkOptimizerParameters.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkOptimizerParameters.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkSimpleDataObjectDecorator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAffineGeometryFrame.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkAffineGeometryFrame.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkSpatialObjectBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSimpleDataObjectDecorator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkSimpleDataObjectDecorator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkSpatialFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkResampleImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkResampleImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkTileImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSliceBySliceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkSliceBySliceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkVectorResampleImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPointSet.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkPointSet.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkSpatialOrientation.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/ITKLabelMapBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/ITKLabelMapBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSpatialFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkSpatialFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkStreamingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMeshSource.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMesh.castxml.inc /<>/BUILD/Wrapping/itkMeshSource.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageToMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSpatialObjectBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkSpatialObjectBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAdaptiveHistogramEqualizationImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkAdaptiveHistogramEqualizationImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkSpatialObjectPoint.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBinaryProjectionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSpatialOrientation.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkSpatialOrientation.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageMomentsCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTileImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkTileImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkWarpImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSpatialObjectPoint.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkSpatialObjectPoint.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkContourSpatialObjectPoint.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorResampleImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkVectorResampleImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkWrapPadImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStreamingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKCommon.castxml.inc /<>/BUILD/Wrapping/itkStreamingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKCommonCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKPath/CMakeFiles/ITKPathCastXML.dir/build.make Wrapping/Modules/ITKPath/CMakeFiles/ITKPathCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Path/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKPath /<>/BUILD/Wrapping/Modules/ITKPath/CMakeFiles/ITKPathCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPathCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKPath/CMakeFiles/ITKPathCastXML.dir/build.make Wrapping/Modules/ITKPath/CMakeFiles/ITKPathCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPathBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryProjectionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkBinaryProjectionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImagePCAShapeModelEstimator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkInPlaceLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkContourSpatialObjectPoint.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkContourSpatialObjectPoint.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkDTITubeSpatialObjectPoint.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageMomentsCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkImageMomentsCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageShapeModelEstimatorBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageToMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMesh.castxml.inc /<>/BUILD/Wrapping/itkImageToMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMeshToMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPathBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKPath.castxml.inc /<>/BUILD/Wrapping/itkPathBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPolyLineParametricPath.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDTITubeSpatialObjectPoint.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkDTITubeSpatialObjectPoint.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkVesselTubeSpatialObjectPoint.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkWarpImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkWarpImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkZeroFluxNeumannPadImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPolyLineParametricPath.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKPath.castxml.inc /<>/BUILD/Wrapping/itkPolyLineParametricPath.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPathToImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkWrapPadImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkWrapPadImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPointBasedSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageShapeModelEstimatorBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkImageShapeModelEstimatorBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkLabelStatisticsImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkInPlaceLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkInPlaceLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkChangeRegionLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImagePCAShapeModelEstimator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkImagePCAShapeModelEstimator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMaximumProjectionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVesselTubeSpatialObjectPoint.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkVesselTubeSpatialObjectPoint.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPathToImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKPath.castxml.inc /<>/BUILD/Wrapping/itkPathToImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkParametricPath.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPointBasedSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkPointBasedSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBlobSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMaximumProjectionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkMaximumProjectionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMeanProjectionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkImageSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPolygonSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkZeroFluxNeumannPadImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGrid.castxml.inc /<>/BUILD/Wrapping/itkZeroFluxNeumannPadImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKImageGridCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityCastXML.dir/build.make Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkChangeRegionLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkChangeRegionLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageIntensity/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageIntensity /<>/BUILD/Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageIntensityCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityCastXML.dir/build.make Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkAggregateLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkAbsImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkParametricPath.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKPath.castxml.inc /<>/BUILD/Wrapping/itkParametricPath.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageToPathFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMeshToMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMesh.castxml.inc /<>/BUILD/Wrapping/itkMeshToMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBinaryMask3DMeshSource.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMeanProjectionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkMeanProjectionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMedianProjectionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBlobSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkBlobSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkArrowSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAbsImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkAbsImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkAcosImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryMask3DMeshSource.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMesh.castxml.inc /<>/BUILD/Wrapping/itkBinaryMask3DMeshSource.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKMeshCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingCastXML.dir/build.make Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageToPathFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKPath.castxml.inc /<>/BUILD/Wrapping/itkImageToPathFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Thresholding/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKThresholding /<>/BUILD/Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKThresholdingCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingCastXML.dir/build.make Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkHistogramThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPathSource.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPolygonSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkPolygonSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBoxSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAggregateLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkAggregateLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkAutoCropLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkArrowSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkArrowSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkContourSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMedianProjectionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkMedianProjectionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMinimumMaximumImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHistogramThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkHistogramThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkHistogramThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAcosImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkAcosImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkAddImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPathSource.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKPath.castxml.inc /<>/BUILD/Wrapping/itkPathSource.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKPathCastXML make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkAndImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBoxSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkBoxSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkDTITubeSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAutoCropLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkAutoCropLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBinaryFillholeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelStatisticsImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkLabelStatisticsImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMinimumProjectionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAndImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkAndImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkAsinImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMinimumMaximumImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkMinimumMaximumImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkStandardDeviationProjectionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkContourSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkContourSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkEllipseSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAddImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkAddImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkAtan2ImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDTITubeSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkDTITubeSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkGaussianSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHistogramThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkHistogramThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBinaryThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryFillholeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkBinaryFillholeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBinaryGrindPeakImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAsinImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkAsinImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkAtanImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAtan2ImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkAtan2ImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBinaryMagnitudeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMinimumProjectionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkMinimumProjectionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkStatisticsImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkEllipseSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkEllipseSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkGroupSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStandardDeviationProjectionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkStandardDeviationProjectionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkSumProjectionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGaussianSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkGaussianSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkImageMaskSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryGrindPeakImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkBinaryGrindPeakImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBinaryImageToLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAtanImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkAtanImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBoundedReciprocalImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkBinaryThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBinaryThresholdProjectionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStatisticsImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkStatisticsImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkHuangThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryMagnitudeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkBinaryMagnitudeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkClampImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSumProjectionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageStatistics.castxml.inc /<>/BUILD/Wrapping/itkSumProjectionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 20%] Built target ITKImageStatisticsCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsCastXML.dir/build.make Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/ConnectedComponents/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKConnectedComponents /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKConnectedComponentsCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsCastXML.dir/build.make Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkConnectedComponentImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGroupSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkGroupSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkLandmarkSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBoundedReciprocalImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkBoundedReciprocalImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkComplexToImaginaryImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageMaskSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkImageMaskSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkLineSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHuangThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkHuangThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkHuangThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryThresholdProjectionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkBinaryThresholdProjectionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkIntermodesThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryImageToLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkBinaryImageToLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkBinaryImageToShapeLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLandmarkSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkLandmarkSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkLineSpatialObjectPoint.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkClampImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkClampImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkComplexToModulusImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkComplexToImaginaryImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkComplexToImaginaryImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkComplexToPhaseImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkConnectedComponentImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKConnectedComponents.castxml.inc /<>/BUILD/Wrapping/itkConnectedComponentImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkHardConnectedComponentImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLineSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkLineSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkMetaConverterBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLineSpatialObjectPoint.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkLineSpatialObjectPoint.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 20%] Generating ../../itkPlaneSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIntermodesThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkIntermodesThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkIntermodesThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkComplexToModulusImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkComplexToModulusImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkComplexToRealImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryImageToShapeLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkBinaryImageToShapeLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryImageToStatisticsLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHuangThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkHuangThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkIsoDataThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkComplexToPhaseImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkComplexToPhaseImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkConstrainedValueAdditionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHardConnectedComponentImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKConnectedComponents.castxml.inc /<>/BUILD/Wrapping/itkHardConnectedComponentImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkRelabelComponentImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMetaConverterBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkMetaConverterBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkConstrainedValueDifferenceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPlaneSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkPlaneSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkPolygonGroupSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkComplexToRealImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkComplexToRealImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkCosImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIntermodesThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkIntermodesThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkIsoDataThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIsoDataThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkIsoDataThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkConstrainedValueAdditionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkConstrainedValueAdditionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkDivideImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkEdgePotentialImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRelabelComponentImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKConnectedComponents.castxml.inc /<>/BUILD/Wrapping/itkRelabelComponentImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkScalarConnectedComponentImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryImageToStatisticsLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkBinaryImageToStatisticsLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryNotImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkConstrainedValueDifferenceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkConstrainedValueDifferenceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkExpImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPolygonGroupSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkPolygonGroupSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkSceneSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCosImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkCosImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkExpNegativeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDivideImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkDivideImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkHistogramMatchingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkEdgePotentialImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkEdgePotentialImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkIntensityWindowingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScalarConnectedComponentImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKConnectedComponents.castxml.inc /<>/BUILD/Wrapping/itkScalarConnectedComponentImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkThresholdMaximumConnectedComponentsImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIsoDataThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkIsoDataThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkKappaSigmaThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkExpImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkExpImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkInvertIntensityImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryNotImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkBinaryNotImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryReconstructionByDilationImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSceneSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkSceneSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkSpatialObjectToImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkExpNegativeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkExpNegativeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryReconstructionByErosionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHistogramMatchingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkHistogramMatchingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkLog10ImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkThresholdMaximumConnectedComponentsImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKConnectedComponents.castxml.inc /<>/BUILD/Wrapping/itkThresholdMaximumConnectedComponentsImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkVectorConnectedComponentImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSpatialObjectToImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkSpatialObjectToImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkSurfaceSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkInvertIntensityImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkInvertIntensityImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkLogImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkKappaSigmaThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkKappaSigmaThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkKittlerIllingworthThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIntensityWindowingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkIntensityWindowingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkMagnitudeAndPhaseToComplexImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryReconstructionByDilationImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkBinaryReconstructionByDilationImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryShapeKeepNObjectsImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLog10ImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkLog10ImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkMaskImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryReconstructionByErosionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkBinaryReconstructionByErosionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryShapeOpeningImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSurfaceSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkSurfaceSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkSurfaceSpatialObjectPoint.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLogImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkLogImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkMaskNegatedImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkKittlerIllingworthThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkKittlerIllingworthThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkKittlerIllingworthThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMagnitudeAndPhaseToComplexImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkMagnitudeAndPhaseToComplexImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkMaximumImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryShapeKeepNObjectsImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkBinaryShapeKeepNObjectsImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryStatisticsKeepNObjectsImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSurfaceSpatialObjectPoint.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkSurfaceSpatialObjectPoint.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkTubeSpatialObjectPoint.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorConnectedComponentImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKConnectedComponents.castxml.inc /<>/BUILD/Wrapping/itkVectorConnectedComponentImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 21%] Built target ITKConnectedComponentsCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyCastXML.dir/build.make Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/MathematicalMorphology/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMathematicalMorphologyCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyCastXML.dir/build.make Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkFlatStructuringElement.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryShapeOpeningImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkBinaryShapeOpeningImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryStatisticsOpeningImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMaximumImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkMaximumImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkMinimumImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTubeSpatialObjectPoint.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkTubeSpatialObjectPoint.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMaskImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkMaskImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkVesselTubeSpatialObject.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkModulusImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkKittlerIllingworthThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkKittlerIllingworthThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkLiThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFlatStructuringElement.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkFlatStructuringElement.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBlackTopHatImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMaskNegatedImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkMaskNegatedImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkMultiplyImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryStatisticsKeepNObjectsImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkBinaryStatisticsKeepNObjectsImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkChangeLabelLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkModulusImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkModulusImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkNaryAddImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMinimumImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkMinimumImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkNaryMaximumImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVesselTubeSpatialObject.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkVesselTubeSpatialObject.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 21%] Built target ITKSpatialObjectsCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyCastXML.dir/build.make Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBinaryMathematicalMorphologyCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyCastXML.dir/build.make Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryClosingByReconstructionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryStatisticsOpeningImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkBinaryStatisticsOpeningImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkCropLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLiThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkLiThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkLiThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBlackTopHatImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkBlackTopHatImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkClosingByReconstructionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMultiplyImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkMultiplyImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkNormalizeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNaryAddImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkNaryAddImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkNormalizeToConstantImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNaryMaximumImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkNaryMaximumImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkNotImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkChangeLabelLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkChangeLabelLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkLabelImageToLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryClosingByReconstructionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKBinaryMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkBinaryClosingByReconstructionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryDilateImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCropLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkCropLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkLabelImageToShapeLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkClosingByReconstructionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkClosingByReconstructionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkDoubleThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNormalizeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkNormalizeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkOrImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNormalizeToConstantImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkNormalizeToConstantImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkPowImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLiThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkLiThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkMaximumEntropyThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNotImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkNotImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkRGBToLuminanceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryDilateImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKBinaryMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkBinaryDilateImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkOrImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkOrImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelImageToLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelImageToLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryErodeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkRescaleIntensityImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkLabelImageToStatisticsLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPowImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkPowImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDoubleThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkDoubleThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkRoundImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkGrayscaleConnectedClosingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMaximumEntropyThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkMaximumEntropyThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkMaximumEntropyThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRGBToLuminanceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkRGBToLuminanceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkShiftScaleImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelImageToShapeLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelImageToShapeLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkLabelMapMaskImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGrayscaleConnectedClosingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkGrayscaleConnectedClosingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkGrayscaleConnectedOpeningImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRoundImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkRoundImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkSigmoidImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryErodeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKBinaryMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkBinaryErodeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryMorphologicalClosingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelImageToStatisticsLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelImageToStatisticsLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkLabelMapToBinaryImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRescaleIntensityImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkRescaleIntensityImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkSinImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShiftScaleImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkShiftScaleImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkSqrtImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMaximumEntropyThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkMaximumEntropyThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkMomentsThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGrayscaleConnectedOpeningImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkGrayscaleConnectedOpeningImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkGrayscaleDilateImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelMapMaskImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelMapMaskImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkLabelMapToLabelImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSigmoidImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkSigmoidImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkSquareImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSinImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkSinImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkSubtractImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSqrtImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkSqrtImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkTanImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryMorphologicalClosingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKBinaryMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkBinaryMorphologicalClosingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkBinaryMorphologicalOpeningImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMomentsThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkMomentsThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkMomentsThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelMapToBinaryImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelMapToBinaryImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 21%] Generating ../../itkLabelSelectionLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSquareImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkSquareImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkTernaryAddImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSubtractImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkSubtractImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkTernaryMagnitudeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGrayscaleDilateImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkGrayscaleDilateImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkGrayscaleErodeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTanImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkTanImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkGrayscaleFillholeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelMapToLabelImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelMapToLabelImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkLabelShapeKeepNObjectsImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryMorphologicalOpeningImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKBinaryMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkBinaryMorphologicalOpeningImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkBinaryOpeningByReconstructionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTernaryAddImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkTernaryAddImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkTernaryMagnitudeSquaredImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMomentsThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkMomentsThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkOtsuMultipleThresholdsImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelSelectionLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelSelectionLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkLabelShapeOpeningImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGrayscaleFillholeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkGrayscaleFillholeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkGrayscaleFunctionDilateImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTernaryMagnitudeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkTernaryMagnitudeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkVectorExpandImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTernaryMagnitudeSquaredImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkTernaryMagnitudeSquaredImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkGrayscaleFunctionErodeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelShapeKeepNObjectsImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelShapeKeepNObjectsImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkLabelStatisticsKeepNObjectsImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryOpeningByReconstructionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKBinaryMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkBinaryOpeningByReconstructionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkBinaryPruningImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGrayscaleErodeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkGrayscaleErodeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkGrayscaleGeodesicDilateImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkOtsuMultipleThresholdsImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkOtsuMultipleThresholdsImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkOtsuThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGrayscaleFunctionDilateImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkGrayscaleFunctionDilateImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkGrayscaleGeodesicErodeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryPruningImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKBinaryMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkBinaryPruningImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkBinaryThinningImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorExpandImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkVectorExpandImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkVectorIndexSelectionCastImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGrayscaleFunctionErodeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkGrayscaleFunctionErodeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelShapeOpeningImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelShapeOpeningImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkGrayscaleGrindPeakImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkLabelStatisticsOpeningImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGrayscaleGeodesicDilateImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkGrayscaleGeodesicDilateImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkGrayscaleMorphologicalClosingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelStatisticsKeepNObjectsImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelStatisticsKeepNObjectsImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkLabelUniqueLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkOtsuThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkOtsuThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkOtsuThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryThinningImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKBinaryMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkBinaryThinningImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkDilateObjectMorphologyImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGrayscaleGeodesicErodeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkGrayscaleGeodesicErodeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkGrayscaleMorphologicalOpeningImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGrayscaleGrindPeakImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkGrayscaleGrindPeakImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkHConcaveImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorIndexSelectionCastImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkVectorIndexSelectionCastImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkVectorMagnitudeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelStatisticsOpeningImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelStatisticsOpeningImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkMergeLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelUniqueLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkLabelUniqueLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkObjectByObjectLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDilateObjectMorphologyImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKBinaryMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkDilateObjectMorphologyImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkErodeObjectMorphologyImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHConcaveImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkHConcaveImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkHConvexImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGrayscaleMorphologicalClosingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkGrayscaleMorphologicalClosingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkHMaximaImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkOtsuThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkOtsuThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkRenyiEntropyThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGrayscaleMorphologicalOpeningImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkGrayscaleMorphologicalOpeningImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkHMinimaImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorMagnitudeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkVectorMagnitudeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkVectorRescaleIntensityImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMergeLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkMergeLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkPadLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHConvexImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkHConvexImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkMorphologicalGradientImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkErodeObjectMorphologyImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKBinaryMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkErodeObjectMorphologyImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 22%] Built target ITKBinaryMathematicalMorphologyCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelCastXML.dir/build.make Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageLabel/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageLabel /<>/BUILD/Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageLabelCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelCastXML.dir/build.make Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkBinaryContourImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHMaximaImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkHMaximaImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkOpeningByReconstructionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkObjectByObjectLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkObjectByObjectLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkRegionFromReferenceLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRenyiEntropyThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkRenyiEntropyThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkRenyiEntropyThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHMinimaImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkHMinimaImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkReconstructionByDilationImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorRescaleIntensityImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkVectorRescaleIntensityImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkWeightedAddImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPadLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkPadLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 22%] Generating ../../itkRelabelLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkOpeningByReconstructionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkOpeningByReconstructionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkReconstructionByErosionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMorphologicalGradientImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkMorphologicalGradientImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkRegionalMaximaImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageLabel && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryContourImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageLabel.castxml.inc /<>/BUILD/Wrapping/itkBinaryContourImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkChangeLabelImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRegionFromReferenceLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkRegionFromReferenceLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkShapeKeepNObjectsLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkWeightedAddImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkWeightedAddImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkXorImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkReconstructionByDilationImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkReconstructionByDilationImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkRegionalMinimaImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRenyiEntropyThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkRenyiEntropyThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkShanbhagThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRelabelLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkRelabelLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkShapeLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRegionalMaximaImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkRegionalMaximaImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkValuedRegionalMaximaImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkReconstructionByErosionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkReconstructionByErosionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkValuedRegionalMinimaImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageLabel && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkChangeLabelImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageLabel.castxml.inc /<>/BUILD/Wrapping/itkChangeLabelImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkLabelContourImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkXorImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageIntensity.castxml.inc /<>/BUILD/Wrapping/itkXorImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShanbhagThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkShanbhagThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKImageIntensityCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandCastXML.dir/build.make Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkShanbhagThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRegionalMinimaImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkRegionalMinimaImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/NarrowBand/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKNarrowBand /<>/BUILD/Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNarrowBandCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandCastXML.dir/build.make Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkWhiteTopHatImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../ITKNarrowBandBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShapeKeepNObjectsLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkShapeKeepNObjectsLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkShapeOpeningLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShapeLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkShapeLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkShapePositionLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkValuedRegionalMinimaImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkValuedRegionalMinimaImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkValuedRegionalMaximaImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkValuedRegionalMaximaImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkShapeRelabelImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkWhiteTopHatImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMathematicalMorphology.castxml.inc /<>/BUILD/Wrapping/itkWhiteTopHatImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKMathematicalMorphologyCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapCastXML.dir/build.make Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DistanceMap/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKDistanceMap /<>/BUILD/Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDistanceMapCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapCastXML.dir/build.make Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkApproximateSignedDistanceMapImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKNarrowBand && /usr/bin/castxml -o /<>/BUILD/Wrapping/ITKNarrowBandBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKNarrowBand.castxml.inc /<>/BUILD/Wrapping/ITKNarrowBandBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkNarrowBandImageFilterBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageLabel && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelContourImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageLabel.castxml.inc /<>/BUILD/Wrapping/itkLabelContourImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKImageLabelCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshCastXML.dir/build.make Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/QuadEdgeMesh/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMeshCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshCastXML.dir/build.make Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkQuadEdge.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShapeOpeningLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkShapeOpeningLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkShapeRelabelLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShanbhagThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkShanbhagThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkThresholdLabelerImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkTriangleThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShapePositionLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkShapePositionLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkShapeUniqueLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkQuadEdge.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMesh.castxml.inc /<>/BUILD/Wrapping/itkQuadEdge.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkGeometricalQuadEdge.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShapeRelabelImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkShapeRelabelImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkShiftScaleLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkApproximateSignedDistanceMapImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDistanceMap.castxml.inc /<>/BUILD/Wrapping/itkApproximateSignedDistanceMapImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkContourDirectedMeanDistanceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKNarrowBand && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNarrowBandImageFilterBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKNarrowBand.castxml.inc /<>/BUILD/Wrapping/itkNarrowBandImageFilterBase.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKNarrowBandCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingCastXML.dir/build.make Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FastMarching/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKFastMarching /<>/BUILD/Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFastMarchingCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingCastXML.dir/build.make Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkLevelSetNode.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkThresholdLabelerImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkThresholdLabelerImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkTriangleThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGeometricalQuadEdge.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMesh.castxml.inc /<>/BUILD/Wrapping/itkGeometricalQuadEdge.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkQuadEdgeMeshPoint.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShapeRelabelLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkShapeRelabelLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkStatisticsKeepNObjectsLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTriangleThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkTriangleThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkYenThresholdCalculator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLevelSetNode.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFastMarching.castxml.inc /<>/BUILD/Wrapping/itkLevelSetNode.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkNodePair.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkContourDirectedMeanDistanceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDistanceMap.castxml.inc /<>/BUILD/Wrapping/itkContourDirectedMeanDistanceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkContourMeanDistanceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShiftScaleLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkShiftScaleLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkQuadEdgeMeshPoint.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMesh.castxml.inc /<>/BUILD/Wrapping/itkQuadEdgeMeshPoint.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkStatisticsLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkQuadEdgeMeshTraits.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShapeUniqueLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkShapeUniqueLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkStatisticsOpeningLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkYenThresholdCalculator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkYenThresholdCalculator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkYenThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNodePair.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFastMarching.castxml.inc /<>/BUILD/Wrapping/itkNodePair.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFastMarchingStoppingCriterionBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkQuadEdgeMeshTraits.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMesh.castxml.inc /<>/BUILD/Wrapping/itkQuadEdgeMeshTraits.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkQuadEdgeCellTraitsInfo.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStatisticsKeepNObjectsLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkStatisticsKeepNObjectsLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkStatisticsPositionLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkContourMeanDistanceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDistanceMap.castxml.inc /<>/BUILD/Wrapping/itkContourMeanDistanceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTriangleThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkTriangleThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkDanielssonDistanceMapImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkStatisticsRelabelImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkQuadEdgeCellTraitsInfo.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMesh.castxml.inc /<>/BUILD/Wrapping/itkQuadEdgeCellTraitsInfo.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkQuadEdgeMeshLineCell.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFastMarchingStoppingCriterionBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFastMarching.castxml.inc /<>/BUILD/Wrapping/itkFastMarchingStoppingCriterionBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../ITKFastMarchingBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStatisticsOpeningLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkStatisticsOpeningLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkStatisticsRelabelLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStatisticsLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkStatisticsLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkStatisticsUniqueLabelMapFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkYenThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKThresholding.castxml.inc /<>/BUILD/Wrapping/itkYenThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKThresholdingCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageCompareCastXML.dir/build.make Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageCompareCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageCompare/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageCompare /<>/BUILD/Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageCompareCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageCompareCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageCompareCastXML.dir/build.make Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageCompareCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkAbsoluteValueDifferenceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkQuadEdgeMeshLineCell.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMesh.castxml.inc /<>/BUILD/Wrapping/itkQuadEdgeMeshLineCell.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkQuadEdgeMeshBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDanielssonDistanceMapImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDistanceMap.castxml.inc /<>/BUILD/Wrapping/itkDanielssonDistanceMapImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkDirectedHausdorffDistanceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStatisticsPositionLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkStatisticsPositionLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFastChamferDistanceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStatisticsRelabelImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkStatisticsRelabelImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkHausdorffDistanceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStatisticsUniqueLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkStatisticsUniqueLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkIsoContourDistanceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAbsoluteValueDifferenceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageCompare.castxml.inc /<>/BUILD/Wrapping/itkAbsoluteValueDifferenceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkCheckerBoardImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStatisticsRelabelLabelMapFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelMap.castxml.inc /<>/BUILD/Wrapping/itkStatisticsRelabelLabelMapFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKLabelMapCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingCastXML.dir/build.make Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Smoothing/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKSmoothing /<>/BUILD/Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSmoothingCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingCastXML.dir/build.make Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkBinomialBlurImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkQuadEdgeMeshBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMesh.castxml.inc /<>/BUILD/Wrapping/itkQuadEdgeMeshBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkQuadEdgeMeshToQuadEdgeMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDirectedHausdorffDistanceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDistanceMap.castxml.inc /<>/BUILD/Wrapping/itkDirectedHausdorffDistanceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkSignedDanielssonDistanceMapImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFastChamferDistanceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDistanceMap.castxml.inc /<>/BUILD/Wrapping/itkFastChamferDistanceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkSignedMaurerDistanceMapImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHausdorffDistanceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDistanceMap.castxml.inc /<>/BUILD/Wrapping/itkHausdorffDistanceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/castxml -o /<>/BUILD/Wrapping/ITKFastMarchingBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFastMarching.castxml.inc /<>/BUILD/Wrapping/ITKFastMarchingBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFastMarchingImageFilterBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFastMarchingExtensionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinomialBlurImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSmoothing.castxml.inc /<>/BUILD/Wrapping/itkBinomialBlurImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkDiscreteGaussianImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIsoContourDistanceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDistanceMap.castxml.inc /<>/BUILD/Wrapping/itkIsoContourDistanceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkMeanImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSignedDanielssonDistanceMapImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDistanceMap.castxml.inc /<>/BUILD/Wrapping/itkSignedDanielssonDistanceMapImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkMedianImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSignedMaurerDistanceMapImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDistanceMap.castxml.inc /<>/BUILD/Wrapping/itkSignedMaurerDistanceMapImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKDistanceMapCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientCastXML.dir/build.make Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageGradient/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageGradient /<>/BUILD/Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageGradientCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientCastXML.dir/build.make Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkDifferenceOfGaussiansGradientImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCheckerBoardImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageCompare.castxml.inc /<>/BUILD/Wrapping/itkCheckerBoardImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkSTAPLEImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkQuadEdgeMeshToQuadEdgeMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMesh.castxml.inc /<>/BUILD/Wrapping/itkQuadEdgeMeshToQuadEdgeMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKQuadEdgeMeshCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesCastXML.dir/build.make Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageSources/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageSources /<>/BUILD/Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageSourcesCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesCastXML.dir/build.make Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkGaborImageSource.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMeanImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSmoothing.castxml.inc /<>/BUILD/Wrapping/itkMeanImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkRecursiveGaussianImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDiscreteGaussianImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSmoothing.castxml.inc /<>/BUILD/Wrapping/itkDiscreteGaussianImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkSmoothingRecursiveGaussianImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFastMarchingExtensionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFastMarching.castxml.inc /<>/BUILD/Wrapping/itkFastMarchingExtensionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFastMarchingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMedianImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSmoothing.castxml.inc /<>/BUILD/Wrapping/itkMedianImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFastMarchingImageToNodePairContainerAdaptor.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDifferenceOfGaussiansGradientImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGradient.castxml.inc /<>/BUILD/Wrapping/itkDifferenceOfGaussiansGradientImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkGradientImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFastMarchingImageFilterBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFastMarching.castxml.inc /<>/BUILD/Wrapping/itkFastMarchingImageFilterBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFastMarchingReachedTargetNodesStoppingCriterion.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSTAPLEImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageCompare.castxml.inc /<>/BUILD/Wrapping/itkSTAPLEImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkSimilarityIndexImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGaborImageSource.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageSources.castxml.inc /<>/BUILD/Wrapping/itkGaborImageSource.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkGaussianImageSource.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRecursiveGaussianImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSmoothing.castxml.inc /<>/BUILD/Wrapping/itkRecursiveGaussianImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkSquaredDifferenceImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFastMarchingImageToNodePairContainerAdaptor.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFastMarching.castxml.inc /<>/BUILD/Wrapping/itkFastMarchingImageToNodePairContainerAdaptor.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFastMarchingThresholdStoppingCriterion.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGradientImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGradient.castxml.inc /<>/BUILD/Wrapping/itkGradientImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSmoothingRecursiveGaussianImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKSmoothing.castxml.inc /<>/BUILD/Wrapping/itkSmoothingRecursiveGaussianImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkGradientMagnitudeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKSmoothingCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeatureCastXML.dir/build.make Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeatureCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFeature/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageFeature /<>/BUILD/Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeatureCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFeatureCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeatureCastXML.dir/build.make Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeatureCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkHessianRecursiveGaussianImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSimilarityIndexImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageCompare.castxml.inc /<>/BUILD/Wrapping/itkSimilarityIndexImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersCastXML.dir/build.make Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizers/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKOptimizers /<>/BUILD/Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizersCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersCastXML.dir/build.make Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../ITKCostFunctions.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFastMarchingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFastMarching.castxml.inc /<>/BUILD/Wrapping/itkFastMarchingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFastMarchingUpwindGradientImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFastMarchingReachedTargetNodesStoppingCriterion.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFastMarching.castxml.inc /<>/BUILD/Wrapping/itkFastMarchingReachedTargetNodesStoppingCriterion.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFastMarchingUpwindGradientImageFilterBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGaussianImageSource.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageSources.castxml.inc /<>/BUILD/Wrapping/itkGaussianImageSource.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkGenerateImageSource.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSquaredDifferenceImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageCompare.castxml.inc /<>/BUILD/Wrapping/itkSquaredDifferenceImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKImageCompareCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsCastXML.dir/build.make Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LevelSets/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKLevelSets /<>/BUILD/Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLevelSetsCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsCastXML.dir/build.make Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkLevelSetFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizers && /usr/bin/castxml -o /<>/BUILD/Wrapping/ITKCostFunctions.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKOptimizers.castxml.inc /<>/BUILD/Wrapping/ITKCostFunctions.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../ITKOptimizersBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGradientMagnitudeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGradient.castxml.inc /<>/BUILD/Wrapping/itkGradientMagnitudeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkGradientMagnitudeRecursiveGaussianImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFastMarchingThresholdStoppingCriterion.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFastMarching.castxml.inc /<>/BUILD/Wrapping/itkFastMarchingThresholdStoppingCriterion.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkCostFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHessianRecursiveGaussianImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkHessianRecursiveGaussianImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkBilateralImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLevelSetFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkLevelSetFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkSparseFieldLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFastMarchingUpwindGradientImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFastMarching.castxml.inc /<>/BUILD/Wrapping/itkFastMarchingUpwindGradientImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkSparseFieldFourthOrderLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizers && /usr/bin/castxml -o /<>/BUILD/Wrapping/ITKOptimizersBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKOptimizers.castxml.inc /<>/BUILD/Wrapping/ITKOptimizersBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkSegmentationLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizers && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCostFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKOptimizers.castxml.inc /<>/BUILD/Wrapping/itkCostFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKOptimizersCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasCastXML.dir/build.make Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/AntiAlias/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKAntiAlias /<>/BUILD/Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAntiAliasCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasCastXML.dir/build.make Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkAntiAliasBinaryImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFastMarchingUpwindGradientImageFilterBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFastMarching.castxml.inc /<>/BUILD/Wrapping/itkFastMarchingUpwindGradientImageFilterBase.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKFastMarchingCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionCastXML.dir/build.make Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BiasCorrection/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKBiasCorrection /<>/BUILD/Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBiasCorrectionCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionCastXML.dir/build.make Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkN4BiasFieldCorrectionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGradientMagnitudeRecursiveGaussianImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGradient.castxml.inc /<>/BUILD/Wrapping/itkGradientMagnitudeRecursiveGaussianImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkGradientRecursiveGaussianImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGenerateImageSource.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageSources.castxml.inc /<>/BUILD/Wrapping/itkGenerateImageSource.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkGridImageSource.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBilateralImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkBilateralImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkCannyEdgeDetectionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSparseFieldLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkSparseFieldLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkShapePriorSegmentationLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAntiAlias && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAntiAliasBinaryImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKAntiAlias.castxml.inc /<>/BUILD/Wrapping/itkAntiAliasBinaryImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKAntiAliasCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersCastXML.dir/build.make Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Classifiers/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKClassifiers /<>/BUILD/Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKClassifiersCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersCastXML.dir/build.make Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkBayesianClassifierImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSegmentationLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkSegmentationLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkAnisotropicFourthOrderLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSparseFieldFourthOrderLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkSparseFieldFourthOrderLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkCannySegmentationLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGridImageSource.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageSources.castxml.inc /<>/BUILD/Wrapping/itkGridImageSource.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkParametricImageSource.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCannyEdgeDetectionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkCannyEdgeDetectionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkDerivativeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGradientRecursiveGaussianImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGradient.castxml.inc /<>/BUILD/Wrapping/itkGradientRecursiveGaussianImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkVectorGradientMagnitudeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBiasCorrection && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkN4BiasFieldCorrectionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKBiasCorrection.castxml.inc /<>/BUILD/Wrapping/itkN4BiasFieldCorrectionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKBiasCorrectionCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapCastXML.dir/build.make Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Colormap/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKColormap /<>/BUILD/Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKColormapCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapCastXML.dir/build.make Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkColormapFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShapePriorSegmentationLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkShapePriorSegmentationLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkCollidingFrontsImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKClassifiers && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBayesianClassifierImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKClassifiers.castxml.inc /<>/BUILD/Wrapping/itkBayesianClassifierImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkBayesianClassifierInitializationImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDerivativeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkDerivativeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkGradientVectorFlowImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorGradientMagnitudeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageGradient.castxml.inc /<>/BUILD/Wrapping/itkVectorGradientMagnitudeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKImageGradientCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTCastXML.dir/build.make Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FFT/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKFFT /<>/BUILD/Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFFTCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTCastXML.dir/build.make Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkComplexToComplexFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAnisotropicFourthOrderLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkAnisotropicFourthOrderLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkCurvesLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKColormap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkColormapFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKColormap.castxml.inc /<>/BUILD/Wrapping/itkColormapFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkCustomColormapFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCannySegmentationLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkCannySegmentationLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkGeodesicActiveContourLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkParametricImageSource.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageSources.castxml.inc /<>/BUILD/Wrapping/itkParametricImageSource.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkPhysicalPointImageSource.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkComplexToComplexFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkComplexToComplexFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFFTPadImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKClassifiers && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBayesianClassifierInitializationImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKClassifiers.castxml.inc /<>/BUILD/Wrapping/itkBayesianClassifierInitializationImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkScalarImageKmeansImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGradientVectorFlowImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkGradientVectorFlowImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkHessian3DToVesselnessMeasureImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCollidingFrontsImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkCollidingFrontsImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKColormap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCustomColormapFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKColormap.castxml.inc /<>/BUILD/Wrapping/itkCustomColormapFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkGeodesicActiveContourShapePriorLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkScalarToRGBColormapImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCurvesLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkCurvesLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkIsotropicFourthOrderLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHessian3DToVesselnessMeasureImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkHessian3DToVesselnessMeasureImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkHessianToObjectnessMeasureImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPhysicalPointImageSource.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageSources.castxml.inc /<>/BUILD/Wrapping/itkPhysicalPointImageSource.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKImageSourcesCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionCastXML.dir/build.make Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGeodesicActiveContourLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkGeodesicActiveContourLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Convolution/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKConvolution /<>/BUILD/Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKConvolutionCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionCastXML.dir/build.make Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkLaplacianSegmentationLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkConvolutionImageFilterBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKColormap && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScalarToRGBColormapImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKColormap.castxml.inc /<>/BUILD/Wrapping/itkScalarToRGBColormapImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKColormapCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionCastXML.dir/build.make Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Deconvolution/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKDeconvolution /<>/BUILD/Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeconvolutionCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionCastXML.dir/build.make Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkIterativeDeconvolutionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFFTPadImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkFFTPadImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFFTShiftImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHessianToObjectnessMeasureImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkHessianToObjectnessMeasureImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkHoughTransform2DCirclesImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGeodesicActiveContourShapePriorLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkGeodesicActiveContourShapePriorLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkNarrowBandCurvesLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkConvolutionImageFilterBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKConvolution.castxml.inc /<>/BUILD/Wrapping/itkConvolutionImageFilterBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkConvolutionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIsotropicFourthOrderLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkIsotropicFourthOrderLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkNarrowBandLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIterativeDeconvolutionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDeconvolution.castxml.inc /<>/BUILD/Wrapping/itkIterativeDeconvolutionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkInverseDeconvolutionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLaplacianSegmentationLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkLaplacianSegmentationLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkNarrowBandThresholdSegmentationLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKClassifiers && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScalarImageKmeansImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKClassifiers.castxml.inc /<>/BUILD/Wrapping/itkScalarImageKmeansImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHoughTransform2DCirclesImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkHoughTransform2DCirclesImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 23%] Built target ITKClassifiersCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldCastXML.dir/build.make Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkHoughTransform2DLinesImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DisplacementField/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKDisplacementField /<>/BUILD/Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDisplacementFieldCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldCastXML.dir/build.make Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkTimeVaryingVelocityFieldTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFFTShiftImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkFFTShiftImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFFTWComplexToComplexFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkConvolutionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKConvolution.castxml.inc /<>/BUILD/Wrapping/itkConvolutionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkFFTConvolutionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNarrowBandCurvesLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkNarrowBandCurvesLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkParallelSparseFieldLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTimeVaryingVelocityFieldTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDisplacementField.castxml.inc /<>/BUILD/Wrapping/itkTimeVaryingVelocityFieldTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 23%] Generating ../../itkBSplineExponentialDiffeomorphicTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHoughTransform2DLinesImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkHoughTransform2DLinesImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkLaplacianImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkInverseDeconvolutionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDeconvolution.castxml.inc /<>/BUILD/Wrapping/itkInverseDeconvolutionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkLandweberDeconvolutionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFFTWComplexToComplexFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkFFTWComplexToComplexFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkFFTWForwardFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNarrowBandLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkNarrowBandLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkReinitializeLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNarrowBandThresholdSegmentationLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkNarrowBandThresholdSegmentationLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkSegmentationLevelSetFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFFTConvolutionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKConvolution.castxml.inc /<>/BUILD/Wrapping/itkFFTConvolutionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkFFTNormalizedCorrelationImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkParallelSparseFieldLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkParallelSparseFieldLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkShapeDetectionLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLaplacianImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkLaplacianImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkLaplacianRecursiveGaussianImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBSplineExponentialDiffeomorphicTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDisplacementField.castxml.inc /<>/BUILD/Wrapping/itkBSplineExponentialDiffeomorphicTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkBSplineSmoothingOnUpdateDisplacementFieldTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFFTWForwardFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkFFTWForwardFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkFFTWGlobalConfiguration.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkReinitializeLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkReinitializeLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkShapePriorMAPCostFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSegmentationLevelSetFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkSegmentationLevelSetFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkShapePriorMAPCostFunctionBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFFTNormalizedCorrelationImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKConvolution.castxml.inc /<>/BUILD/Wrapping/itkFFTNormalizedCorrelationImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkMaskedFFTNormalizedCorrelationImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFFTWGlobalConfiguration.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkFFTWGlobalConfiguration.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkFFTWHalfHermitianToRealInverseFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLaplacianRecursiveGaussianImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkLaplacianRecursiveGaussianImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkLaplacianSharpeningImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBSplineSmoothingOnUpdateDisplacementFieldTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDisplacementField.castxml.inc /<>/BUILD/Wrapping/itkBSplineSmoothingOnUpdateDisplacementFieldTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkConstantVelocityFieldTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShapeDetectionLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkShapeDetectionLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkThresholdSegmentationLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShapePriorMAPCostFunctionBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkShapePriorMAPCostFunctionBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLandweberDeconvolutionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDeconvolution.castxml.inc /<>/BUILD/Wrapping/itkLandweberDeconvolutionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShapePriorMAPCostFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkShapePriorMAPCostFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkProjectedLandweberDeconvolutionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkRichardsonLucyDeconvolutionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkUnsharpMaskLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMaskedFFTNormalizedCorrelationImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKConvolution.castxml.inc /<>/BUILD/Wrapping/itkMaskedFFTNormalizedCorrelationImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKConvolutionCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadCastXML.dir/build.make Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BioRad/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOBioRad /<>/BUILD/Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBioRadCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadCastXML.dir/build.make Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkBioRadImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFFTWHalfHermitianToRealInverseFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkFFTWHalfHermitianToRealInverseFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkFFTWInverseFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLaplacianSharpeningImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkLaplacianSharpeningImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkMaskFeaturePointSelectionFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkConstantVelocityFieldTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDisplacementField.castxml.inc /<>/BUILD/Wrapping/itkConstantVelocityFieldTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkDisplacementFieldJacobianDeterminantFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkProjectedLandweberDeconvolutionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDeconvolution.castxml.inc /<>/BUILD/Wrapping/itkProjectedLandweberDeconvolutionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkTikhonovDeconvolutionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOBioRad && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBioRadImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOBioRad.castxml.inc /<>/BUILD/Wrapping/itkBioRadImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKIOBioRadCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMCastXML.dir/build.make Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/LSM/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOLSM /<>/BUILD/Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOLSMCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMCastXML.dir/build.make Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkLSMImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFFTWInverseFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkFFTWInverseFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMaskFeaturePointSelectionFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkMaskFeaturePointSelectionFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkFFTWRealToHalfHermitianForwardFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkSimpleContourExtractorImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDisplacementFieldJacobianDeterminantFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDisplacementField.castxml.inc /<>/BUILD/Wrapping/itkDisplacementFieldJacobianDeterminantFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkDisplacementFieldTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRichardsonLucyDeconvolutionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDeconvolution.castxml.inc /<>/BUILD/Wrapping/itkRichardsonLucyDeconvolutionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkWienerDeconvolutionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkThresholdSegmentationLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkThresholdSegmentationLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkVectorThresholdSegmentationLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkUnsharpMaskLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkUnsharpMaskLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkSobelEdgeDetectionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOLSM && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLSMImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOLSM.castxml.inc /<>/BUILD/Wrapping/itkLSMImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKIOLSMCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulateCastXML.dir/build.make Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulateCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Stimulate/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOStimulate /<>/BUILD/Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulateCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOStimulateCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulateCastXML.dir/build.make Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulateCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkStimulateImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDisplacementFieldTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDisplacementField.castxml.inc /<>/BUILD/Wrapping/itkDisplacementFieldTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkGaussianExponentialDiffeomorphicTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTikhonovDeconvolutionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDeconvolution.castxml.inc /<>/BUILD/Wrapping/itkTikhonovDeconvolutionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkGaussianSmoothingOnUpdateDisplacementFieldTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFFTWRealToHalfHermitianForwardFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkFFTWRealToHalfHermitianForwardFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkForwardFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSimpleContourExtractorImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkSimpleContourExtractorImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkUnsharpMaskImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkWienerDeconvolutionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDeconvolution.castxml.inc /<>/BUILD/Wrapping/itkWienerDeconvolutionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKDeconvolutionCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonCastXML.dir/build.make Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Common/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationCommonCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonCastXML.dir/build.make Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkBlockMatchingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSobelEdgeDetectionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkSobelEdgeDetectionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkZeroCrossingBasedEdgeDetectionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOStimulate && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStimulateImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOStimulate.castxml.inc /<>/BUILD/Wrapping/itkStimulateImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKIOStimulateCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenCastXML.dir/build.make Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Eigen/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKEigen /<>/BUILD/Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKEigenCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenCastXML.dir/build.make Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkEigenAnalysis2DImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGaussianExponentialDiffeomorphicTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDisplacementField.castxml.inc /<>/BUILD/Wrapping/itkGaussianExponentialDiffeomorphicTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorThresholdSegmentationLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLevelSets.castxml.inc /<>/BUILD/Wrapping/itkVectorThresholdSegmentationLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKLevelSetsCastXML make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkVelocityFieldTransform.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkForwardFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkForwardFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkFullToHalfHermitianImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGaussianSmoothingOnUpdateDisplacementFieldTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDisplacementField.castxml.inc /<>/BUILD/Wrapping/itkGaussianSmoothingOnUpdateDisplacementFieldTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkHalfHermitianToRealInverseFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBlockMatchingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkBlockMatchingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkCenteredTransformInitializer.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKEigen && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkEigenAnalysis2DImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKEigen.castxml.inc /<>/BUILD/Wrapping/itkEigenAnalysis2DImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKEigenCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsCastXML.dir/build.make Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/SpatialObjects/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSpatialObjectsCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsCastXML.dir/build.make Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkSpatialObjectReader.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDisplacementField.castxml.inc /<>/BUILD/Wrapping/itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkSpatialObjectWriter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVelocityFieldTransform.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKDisplacementField.castxml.inc /<>/BUILD/Wrapping/itkVelocityFieldTransform.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKDisplacementFieldCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationCastXML.dir/build.make Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/PDEDeformable/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPDEDeformableRegistrationCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationCastXML.dir/build.make Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkDemonsRegistrationFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFullToHalfHermitianImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkFullToHalfHermitianImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkHalfToFullHermitianImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHalfHermitianToRealInverseFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkHalfHermitianToRealInverseFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkInverseFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCenteredTransformInitializer.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkCenteredTransformInitializer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkCenteredVersorTransformInitializer.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHalfToFullHermitianImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkHalfToFullHermitianImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkRealToHalfHermitianForwardFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSpatialObjectReader.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkSpatialObjectReader.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSpatialObjectWriter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOSpatialObjects.castxml.inc /<>/BUILD/Wrapping/itkSpatialObjectWriter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkVnlComplexToComplexFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKIOSpatialObjectsCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLCastXML.dir/build.make Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/IPL/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOIPL /<>/BUILD/Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOIPLCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLCastXML.dir/build.make Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkIPLCommonImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkInverseFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkInverseFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkVnlForwardFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVnlComplexToComplexFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkVnlComplexToComplexFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkVnlHalfHermitianToRealInverseFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVnlForwardFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkVnlForwardFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkVnlInverseFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOIPL && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIPLCommonImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOIPL.castxml.inc /<>/BUILD/Wrapping/itkIPLCommonImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKIOIPLCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGECastXML.dir/build.make Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGECastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GE/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOGE /<>/BUILD/Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGECastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGECastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGECastXML.dir/build.make Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGECastXML.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRealToHalfHermitianForwardFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkRealToHalfHermitianForwardFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkGE4ImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkVnlRealToHalfHermitianForwardFFTImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDemonsRegistrationFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKPDEDeformableRegistration.castxml.inc /<>/BUILD/Wrapping/itkDemonsRegistrationFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkLevelSetMotionRegistrationFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVnlHalfHermitianToRealInverseFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkVnlHalfHermitianToRealInverseFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkPDEDeformableRegistrationFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVnlInverseFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkVnlInverseFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkSymmetricForcesDemonsRegistrationFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGE && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGE4ImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOGE.castxml.inc /<>/BUILD/Wrapping/itkGE4ImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkGE5ImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVnlRealToHalfHermitianForwardFFTImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKFFT.castxml.inc /<>/BUILD/Wrapping/itkVnlRealToHalfHermitianForwardFFTImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKFFTCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensCastXML.dir/build.make Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Siemens/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOSiemens /<>/BUILD/Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSiemensCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensCastXML.dir/build.make Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkSiemensVisionImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGE && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGE5ImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOGE.castxml.inc /<>/BUILD/Wrapping/itkGE5ImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkGEAdwImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOSiemens && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSiemensVisionImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOSiemens.castxml.inc /<>/BUILD/Wrapping/itkSiemensVisionImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKIOSiemensCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5CastXML.dir/build.make Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5CastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/HDF5/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOHDF5 /<>/BUILD/Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5CastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOHDF5CastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5CastXML.dir/build.make Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5CastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkHDF5ImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLevelSetMotionRegistrationFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKPDEDeformableRegistration.castxml.inc /<>/BUILD/Wrapping/itkLevelSetMotionRegistrationFilter.cxx make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCCastXML.dir/build.make Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/MRC/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOMRC /<>/BUILD/Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMRCCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCCastXML.dir/build.make Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkMRCImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOHDF5 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkHDF5ImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOHDF5.castxml.inc /<>/BUILD/Wrapping/itkHDF5ImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKIOHDF5CastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWCastXML.dir/build.make Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/RAW/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIORAW /<>/BUILD/Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIORAWCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWCastXML.dir/build.make Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWCastXML.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGE && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGEAdwImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOGE.castxml.inc /<>/BUILD/Wrapping/itkGEAdwImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPDEDeformableRegistrationFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKPDEDeformableRegistration.castxml.inc /<>/BUILD/Wrapping/itkPDEDeformableRegistrationFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCenteredVersorTransformInitializer.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkCenteredVersorTransformInitializer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkRawImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKIOGECastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBaseCastXML.dir/build.make Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBaseCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkImageToImageMetric.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkImageRegistrationMethod.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformBase/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOTransformBase /<>/BUILD/Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBaseCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformBaseCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBaseCastXML.dir/build.make Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBaseCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkTransformFileReader.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSymmetricForcesDemonsRegistrationFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKPDEDeformableRegistration.castxml.inc /<>/BUILD/Wrapping/itkSymmetricForcesDemonsRegistrationFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKPDEDeformableRegistrationCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionCastXML.dir/build.make Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFusion/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageFusion /<>/BUILD/Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFusionCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionCastXML.dir/build.make Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkLabelMapContourOverlayImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOMRC && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMRCImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOMRC.castxml.inc /<>/BUILD/Wrapping/itkMRCImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKIOMRCCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoiseCastXML.dir/build.make Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoiseCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageNoise/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageNoise /<>/BUILD/Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoiseCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageNoiseCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoiseCastXML.dir/build.make Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoiseCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkAdditiveGaussianNoiseImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTransformBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTransformFileReader.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOTransformBase.castxml.inc /<>/BUILD/Wrapping/itkTransformFileReader.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkTransformFileWriter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIORAW && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRawImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIORAW.castxml.inc /<>/BUILD/Wrapping/itkRawImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 24%] Built target ITKIORAWCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingCastXML.dir/build.make Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LabelVoting/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKLabelVoting /<>/BUILD/Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelVotingCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingCastXML.dir/build.make Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkVotingBinaryImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTransformBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTransformFileWriter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOTransformBase.castxml.inc /<>/BUILD/Wrapping/itkTransformFileWriter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkTransformIOBaseTemplate.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelMapContourOverlayImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFusion.castxml.inc /<>/BUILD/Wrapping/itkLabelMapContourOverlayImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkLabelMapOverlayImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAdditiveGaussianNoiseImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageNoise.castxml.inc /<>/BUILD/Wrapping/itkAdditiveGaussianNoiseImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 24%] Generating ../../itkNoiseBaseImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVotingBinaryImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelVoting.castxml.inc /<>/BUILD/Wrapping/itkVotingBinaryImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkBinaryMedianImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageToImageMetric.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkImageToImageMetric.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkLandmarkBasedTransformInitializer.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTransformBase && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTransformIOBaseTemplate.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKIOTransformBase.castxml.inc /<>/BUILD/Wrapping/itkTransformIOBaseTemplate.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKIOTransformBaseCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringCastXML.dir/build.make Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMeshFilteringCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringCastXML.dir/build.make Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkBorderQuadEdgeMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageRegistrationMethod.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkImageRegistrationMethod.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkMattesMutualInformationImageToImageMetric.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNoiseBaseImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageNoise.castxml.inc /<>/BUILD/Wrapping/itkNoiseBaseImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkSaltAndPepperNoiseImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelMapOverlayImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFusion.castxml.inc /<>/BUILD/Wrapping/itkLabelMapOverlayImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkLabelMapToRGBImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBinaryMedianImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelVoting.castxml.inc /<>/BUILD/Wrapping/itkBinaryMedianImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkLabelVotingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLandmarkBasedTransformInitializer.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkLandmarkBasedTransformInitializer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkLabelOverlayImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBorderQuadEdgeMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMeshFiltering.castxml.inc /<>/BUILD/Wrapping/itkBorderQuadEdgeMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkCleanQuadEdgeMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSaltAndPepperNoiseImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageNoise.castxml.inc /<>/BUILD/Wrapping/itkSaltAndPepperNoiseImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkShotNoiseImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelVotingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelVoting.castxml.inc /<>/BUILD/Wrapping/itkLabelVotingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkVotingBinaryHoleFillingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelMapToRGBImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFusion.castxml.inc /<>/BUILD/Wrapping/itkLabelMapToRGBImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkLabelToRGBImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelOverlayImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFusion.castxml.inc /<>/BUILD/Wrapping/itkLabelOverlayImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkUnsharpMaskImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkUnsharpMaskImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkZeroCrossingBasedEdgeDetectionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkZeroCrossingBasedEdgeDetectionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingCastXML.dir/build.make Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkZeroCrossingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/RegionGrowing/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKRegionGrowing /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegionGrowingCastXML make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkSpeckleNoiseImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingCastXML.dir/build.make Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkConfidenceConnectedImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMattesMutualInformationImageToImageMetric.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkMattesMutualInformationImageToImageMetric.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkMeanReciprocalSquareDifferenceImageToImageMetric.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkShotNoiseImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageNoise.castxml.inc /<>/BUILD/Wrapping/itkShotNoiseImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkConnectedThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVotingBinaryHoleFillingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelVoting.castxml.inc /<>/BUILD/Wrapping/itkVotingBinaryHoleFillingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkVotingBinaryIterativeHoleFillingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkZeroCrossingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFeature.castxml.inc /<>/BUILD/Wrapping/itkZeroCrossingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKImageFeatureCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKCastXML.dir/build.make Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Bridge/VTK/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKVTK /<>/BUILD/Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVTKCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKCastXML.dir/build.make Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkVTKImageExport.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkCleanQuadEdgeMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMeshFiltering.castxml.inc /<>/BUILD/Wrapping/itkCleanQuadEdgeMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkDelaunayConformingQuadEdgeMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSpeckleNoiseImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageNoise.castxml.inc /<>/BUILD/Wrapping/itkSpeckleNoiseImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKImageNoiseCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiCastXML.dir/build.make Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Voronoi/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKVoronoi /<>/BUILD/Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVoronoiCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiCastXML.dir/build.make Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkVoronoiSegmentationImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelToRGBImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKImageFusion.castxml.inc /<>/BUILD/Wrapping/itkLabelToRGBImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKImageFusionCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsCastXML.dir/build.make Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Watersheds/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKWatersheds /<>/BUILD/Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKWatershedsCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsCastXML.dir/build.make Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkIsolatedWatershedImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkConfidenceConnectedImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegionGrowing.castxml.inc /<>/BUILD/Wrapping/itkConfidenceConnectedImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkIsolatedConnectedImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVotingBinaryIterativeHoleFillingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKLabelVoting.castxml.inc /<>/BUILD/Wrapping/itkVotingBinaryIterativeHoleFillingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKLabelVotingCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4CastXML.dir/build.make Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4CastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizersv4/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4CastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizersv4CastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4CastXML.dir/build.make Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4CastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkGradientDescentOptimizerBasev4.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkConnectedThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegionGrowing.castxml.inc /<>/BUILD/Wrapping/itkConnectedThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkGradientDescentOptimizerv4.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKVTK && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVTKImageExport.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKVTK.castxml.inc /<>/BUILD/Wrapping/itkVTKImageExport.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkVTKImageImport.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGradientDescentOptimizerBasev4.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKOptimizersv4.castxml.inc /<>/BUILD/Wrapping/itkGradientDescentOptimizerBasev4.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkObjectToObjectMetric.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGradientDescentOptimizerv4.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKOptimizersv4.castxml.inc /<>/BUILD/Wrapping/itkGradientDescentOptimizerv4.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkObjectToObjectMetricBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIsolatedConnectedImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegionGrowing.castxml.inc /<>/BUILD/Wrapping/itkIsolatedConnectedImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkNeighborhoodConnectedImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKVoronoi && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVoronoiSegmentationImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKVoronoi.castxml.inc /<>/BUILD/Wrapping/itkVoronoiSegmentationImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDelaunayConformingQuadEdgeMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMeshFiltering.castxml.inc /<>/BUILD/Wrapping/itkDelaunayConformingQuadEdgeMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKVoronoiCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4CastXML.dir/build.make Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4CastXML.dir/depend make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkDiscreteCurvatureQuadEdgeMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Metricsv4/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKMetricsv4 /<>/BUILD/Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4CastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMetricsv4CastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4CastXML.dir/build.make Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4CastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkImageToImageMetricv4.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMeanReciprocalSquareDifferenceImageToImageMetric.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkMeanReciprocalSquareDifferenceImageToImageMetric.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkMeanSquaresImageToImageMetric.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkIsolatedWatershedImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKWatersheds.castxml.inc /<>/BUILD/Wrapping/itkIsolatedWatershedImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkMorphologicalWatershedFromMarkersImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkObjectToObjectMetricBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKOptimizersv4.castxml.inc /<>/BUILD/Wrapping/itkObjectToObjectMetricBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkObjectToObjectOptimizerBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkObjectToObjectMetric.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKOptimizersv4.castxml.inc /<>/BUILD/Wrapping/itkObjectToObjectMetric.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkOptimizerParameterScalesEstimator.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKVTK && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVTKImageImport.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKVTK.castxml.inc /<>/BUILD/Wrapping/itkVTKImageImport.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKVTKCastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4CastXML.dir/build.make Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4CastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/RegistrationMethodsv4/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4 /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4CastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationMethodsv4CastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4CastXML.dir/build.make Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4CastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkImageRegistrationMethodv4.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDiscreteCurvatureQuadEdgeMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMeshFiltering.castxml.inc /<>/BUILD/Wrapping/itkDiscreteCurvatureQuadEdgeMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkDiscreteCurvatureTensorQuadEdgeMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNeighborhoodConnectedImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegionGrowing.castxml.inc /<>/BUILD/Wrapping/itkNeighborhoodConnectedImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkVectorConfidenceConnectedImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkObjectToObjectOptimizerBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKOptimizersv4.castxml.inc /<>/BUILD/Wrapping/itkObjectToObjectOptimizerBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkQuasiNewtonOptimizerv4.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkOptimizerParameterScalesEstimator.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKOptimizersv4.castxml.inc /<>/BUILD/Wrapping/itkOptimizerParameterScalesEstimator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkRegularStepGradientDescentOptimizerv4.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMorphologicalWatershedFromMarkersImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKWatersheds.castxml.inc /<>/BUILD/Wrapping/itkMorphologicalWatershedFromMarkersImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkMorphologicalWatershedImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMetricsv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageToImageMetricv4.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMetricsv4.castxml.inc /<>/BUILD/Wrapping/itkImageToImageMetricv4.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkMattesMutualInformationImageToImageMetricv4.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDiscreteCurvatureTensorQuadEdgeMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMeshFiltering.castxml.inc /<>/BUILD/Wrapping/itkDiscreteCurvatureTensorQuadEdgeMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkDiscreteGaussianCurvatureQuadEdgeMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkQuasiNewtonOptimizerv4.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKOptimizersv4.castxml.inc /<>/BUILD/Wrapping/itkQuasiNewtonOptimizerv4.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkSingleValuedCostFunctionv4.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRegularStepGradientDescentOptimizerv4.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKOptimizersv4.castxml.inc /<>/BUILD/Wrapping/itkRegularStepGradientDescentOptimizerv4.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMeanSquaresImageToImageMetric.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkMeanSquaresImageToImageMetric.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkDiscreteMaximumCurvatureQuadEdgeMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkMultiResolutionImageRegistrationMethod.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMorphologicalWatershedImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKWatersheds.castxml.inc /<>/BUILD/Wrapping/itkMorphologicalWatershedImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkTobogganImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSingleValuedCostFunctionv4.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKOptimizersv4.castxml.inc /<>/BUILD/Wrapping/itkSingleValuedCostFunctionv4.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKOptimizersv4CastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewCastXML.dir/build.make Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewCastXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/Review/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKReview /<>/BUILD/Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKReviewCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewCastXML.dir/build.make Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkAreaClosingImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkImageRegistrationMethodv4.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationMethodsv4.castxml.inc /<>/BUILD/Wrapping/itkImageRegistrationMethodv4.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVectorConfidenceConnectedImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegionGrowing.castxml.inc /<>/BUILD/Wrapping/itkVectorConfidenceConnectedImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKRegistrationMethodsv4CastXML make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsCastXML.dir/build.make Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsCastXML.dir/depend make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKRegionGrowingCastXML make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkDiscreteMeanCurvatureQuadEdgeMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Wrapping/Generators/Python/PyUtils /<>/BUILD /<>/BUILD/Wrapping/Generators/Python/PyUtils /<>/BUILD/Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsCastXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPyUtilsCastXML make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsCastXML.dir/build.make Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsCastXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../../itkPyCommand.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDiscreteMaximumCurvatureQuadEdgeMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMeshFiltering.castxml.inc /<>/BUILD/Wrapping/itkDiscreteMaximumCurvatureQuadEdgeMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkDiscreteMinimumCurvatureQuadEdgeMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDiscreteGaussianCurvatureQuadEdgeMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMeshFiltering.castxml.inc /<>/BUILD/Wrapping/itkDiscreteGaussianCurvatureQuadEdgeMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkDiscretePrincipalCurvaturesQuadEdgeMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTobogganImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKWatersheds.castxml.inc /<>/BUILD/Wrapping/itkTobogganImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkWatershedImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMetricsv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMattesMutualInformationImageToImageMetricv4.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMetricsv4.castxml.inc /<>/BUILD/Wrapping/itkMattesMutualInformationImageToImageMetricv4.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkMeanSquaresImageToImageMetricv4.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAreaClosingImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkAreaClosingImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkAreaOpeningImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python/PyUtils && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPyCommand.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKPyUtils.castxml.inc /<>/BUILD/Wrapping/itkPyCommand.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../../itkPyImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDiscreteMeanCurvatureQuadEdgeMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMeshFiltering.castxml.inc /<>/BUILD/Wrapping/itkDiscreteMeanCurvatureQuadEdgeMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkMatrixCoefficients.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMultiResolutionImageRegistrationMethod.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkMultiResolutionImageRegistrationMethod.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkMultiResolutionPyramidImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMeshFiltering.castxml.inc /<>/BUILD/Wrapping/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDiscreteMinimumCurvatureQuadEdgeMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMeshFiltering.castxml.inc /<>/BUILD/Wrapping/itkDiscreteMinimumCurvatureQuadEdgeMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/KWSys/CMakeFiles/ITKKWSys-all.dir/build.make Modules/ThirdParty/KWSys/CMakeFiles/ITKKWSys-all.dir/depend make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkSmoothingQuadEdgeMeshFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/KWSys /<>/BUILD /<>/BUILD/Modules/ThirdParty/KWSys /<>/BUILD/Modules/ThirdParty/KWSys/CMakeFiles/ITKKWSys-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKKWSys-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/KWSys/CMakeFiles/ITKKWSys-all.dir/build.make Modules/ThirdParty/KWSys/CMakeFiles/ITKKWSys-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/KWSys/CMakeFiles/ITKKWSys-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKKWSys-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/testlib/CMakeFiles/itktestlib.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/testlib/CMakeFiles/itktestlib.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/CMakeFiles/itktestlib.dir/DependInfo.cmake --color= Scanning dependencies of target itktestlib make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/testlib/CMakeFiles/itktestlib.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/testlib/CMakeFiles/itktestlib.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/testlib/CMakeFiles/itktestlib.dir/testlib_test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkAreaOpeningImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkAreaOpeningImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python/PyUtils && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPyImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKPyUtils.castxml.inc /<>/BUILD/Wrapping/itkPyImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkBoxMeanImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKPyUtilsCastXML make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_include.dir/build.make Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_include.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_include.dir/DependInfo.cmake --color= Scanning dependencies of target vcl_test_include make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_include.dir/build.make Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_include.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_include.dir/test_include.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_include.dir/test_include.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_include.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Linking CXX executable ../../../../../../../bin/vcl_test_include make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMatrixCoefficients.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMeshFiltering.castxml.inc /<>/BUILD/Wrapping/itkMatrixCoefficients.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditktestlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itktestlib.dir/testlib_test.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/testlib_test.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMetricsv4 && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMeanSquaresImageToImageMetricv4.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKMetricsv4.castxml.inc /<>/BUILD/Wrapping/itkMeanSquaresImageToImageMetricv4.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/testlib/CMakeFiles/itktestlib.dir/testlib_main.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/vcl_test_include.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/vcl_test_include.dir/test_include.cxx.o -o ../../../../../../../bin/vcl_test_include ../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/testlib/CMakeFiles/itktestlib.dir/testlib_root_dir.cxx.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKMetricsv4CastXML make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/build.make Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/depend make[2]: Entering directory '/<>/BUILD' [ 25%] Built target vcl_test_include make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_slamch_test.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_slamch_test.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_slamch_test.dir/DependInfo.cmake --color= Scanning dependencies of target netlib_slamch_test make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_slamch_test.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_slamch_test.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/DependInfo.cmake --color= Scanning dependencies of target vcl_test_all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/build.make Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_driver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_slamch_test.dir/slamch-test.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIE -o CMakeFiles/netlib_slamch_test.dir/slamch-test.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/slamch-test.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Linking C executable ../../../../../../../../bin/netlib_slamch_test make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/netlib_slamch_test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/netlib_slamch_test.dir/slamch-test.c.o -o ../../../../../../../../bin/netlib_slamch_test ../../../../../../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target netlib_slamch_test make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lbfgs_example.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lbfgs_example.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lbfgs_example.dir/DependInfo.cmake --color= Scanning dependencies of target netlib_lbfgs_example make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lbfgs_example.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lbfgs_example.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lbfgs_example.dir/lbfgs-example.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIE -o CMakeFiles/netlib_lbfgs_example.dir/lbfgs-example.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/lbfgs-example.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Linking C executable ../../../../../../../../bin/netlib_lbfgs_example make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMultiResolutionPyramidImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkMultiResolutionPyramidImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkMutualInformationImageToImageMetric.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/netlib_lbfgs_example.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/netlib_lbfgs_example.dir/lbfgs-example.c.o -o ../../../../../../../../bin/netlib_lbfgs_example ../../../../../../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditktestlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itktestlib.dir/testlib_main.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/testlib_main.cxx make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lbfgsb_example.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lbfgsb_example.dir/depend make[2]: Entering directory '/<>/BUILD' [ 25%] Built target netlib_lbfgs_example make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_integral_test.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_integral_test.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditktestlib_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itktestlib.dir/testlib_root_dir.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/testlib_root_dir.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lbfgsb_example.dir/DependInfo.cmake --color= Scanning dependencies of target netlib_lbfgsb_example make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lbfgsb_example.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lbfgsb_example.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Linking CXX shared library ../../../../../../../lib/libitktestlib-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_integral_test.dir/DependInfo.cmake --color= Scanning dependencies of target netlib_integral_test make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_integral_test.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_integral_test.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lbfgsb_example.dir/lbfgsb-example1.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_integral_test.dir/integral-test.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_driver.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_driver.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_algorithm.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib && /usr/bin/cmake -E cmake_link_script CMakeFiles/itktestlib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libitktestlib-4.12.so.1 -o ../../../../../../../lib/libitktestlib-4.12.so.1 CMakeFiles/itktestlib.dir/testlib_test.cxx.o CMakeFiles/itktestlib.dir/testlib_main.cxx.o CMakeFiles/itktestlib.dir/testlib_root_dir.cxx.o ../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib && /usr/bin/cmake -E cmake_symlink_library ../../../../../../../lib/libitktestlib-4.12.so.1 ../../../../../../../lib/libitktestlib-4.12.so.1 ../../../../../../../lib/libitktestlib-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target itktestlib make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIE -o CMakeFiles/netlib_integral_test.dir/integral-test.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/integral-test.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Linking C executable ../../../../../../../../bin/netlib_integral_test make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIE -o CMakeFiles/netlib_lbfgsb_example.dir/lbfgsb-example1.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/lbfgsb-example1.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Linking C executable ../../../../../../../../bin/netlib_lbfgsb_example make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/netlib_integral_test.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/netlib_integral_test.dir/integral-test.c.o -o ../../../../../../../../bin/netlib_integral_test ../../../../../../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target netlib_integral_test make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_link.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_link.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/netlib_lbfgsb_example.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/netlib_lbfgsb_example.dir/lbfgsb-example1.c.o -o ../../../../../../../../bin/netlib_lbfgsb_example ../../../../../../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_link.dir/DependInfo.cmake --color= Scanning dependencies of target testlib_test_link make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_link.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_link.dir/build make[2]: Entering directory '/<>/BUILD' [ 25%] Built target netlib_lbfgsb_example make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_all.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/DependInfo.cmake --color= Scanning dependencies of target itkvnl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_link.dir/test_link.cxx.o make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_all.dir/DependInfo.cmake --color= Scanning dependencies of target testlib_test_all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_all.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_all.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_all.dir/test_driver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/testlib_test_link.dir/test_link.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/test_link.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_alloc.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBoxMeanImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkBoxMeanImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Linking CXX executable ../../../../../../../../bin/testlib_test_link make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkBoxSigmaImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testlib_test_link.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/testlib_test_link.dir/test_link.cxx.o -o ../../../../../../../../bin/testlib_test_link ../../../../../../../../lib/libitktestlib-4.12.so.1 ../../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target testlib_test_link make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsmrTest2.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsmrTest2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsmrTest2.dir/DependInfo.cmake --color= Scanning dependencies of target netlib_lsmrTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsmrTest2.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsmrTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsmrTest2.dir/lsmrTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/testlib_test_all.dir/test_driver.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/test_driver.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_all.dir/test_assert.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_alloc.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_alloc.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_block.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/c++ -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/netlib_lsmrTest2.dir/lsmrTest2.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/lsmrTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Linking CXX executable ../../../../../../../../bin/netlib_lsmrTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/netlib_lsmrTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/netlib_lsmrTest2.dir/lsmrTest2.cxx.o -o ../../../../../../../../bin/netlib_lsmrTest2 ../../../../../../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target netlib_lsmrTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsqrTest2.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsqrTest2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsqrTest2.dir/DependInfo.cmake --color= Scanning dependencies of target netlib_lsqrTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsqrTest2.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsqrTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsqrTest2.dir/lsqrTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_block.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_block.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_math.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/testlib_test_all.dir/test_assert.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/test_assert.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_all.dir/test_macros.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_math.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_math.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_na.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/c++ -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/netlib_lsqrTest2.dir/lsqrTest2.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/lsqrTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Linking CXX executable ../../../../../../../../bin/netlib_lsqrTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/testlib_test_all.dir/test_macros.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/test_macros.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_all.dir/test_args.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/netlib_lsqrTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/netlib_lsqrTest2.dir/lsqrTest2.cxx.o -o ../../../../../../../../bin/netlib_lsqrTest2 ../../../../../../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target netlib_lsqrTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsqrTest1.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsqrTest1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsqrTest1.dir/DependInfo.cmake --color= Scanning dependencies of target netlib_lsqrTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsqrTest1.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsqrTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_lsqrTest1.dir/lsqrTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/testlib_test_all.dir/test_args.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/test_args.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkSmoothingQuadEdgeMeshFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKQuadEdgeMeshFiltering.castxml.inc /<>/BUILD/Wrapping/itkSmoothingQuadEdgeMeshFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKQuadEdgeMeshFilteringCastXML make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_tricall.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_tricall.dir/depend make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_all.dir/test_root_dir.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_tricall.dir/DependInfo.cmake --color= Scanning dependencies of target netlib_tricall make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_tricall.dir/build.make Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_tricall.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/CMakeFiles/netlib_tricall.dir/tricall.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_na.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_na.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_copy.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cc -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIE -o CMakeFiles/netlib_tricall.dir/tricall.c.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/tricall.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Linking C executable ../../../../../../../../bin/netlib_tricall make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkWatershedImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKWatersheds.castxml.inc /<>/BUILD/Wrapping/itkWatershedImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/netlib_tricall.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/netlib_tricall.dir/tricall.c.o -o ../../../../../../../../bin/netlib_tricall ../../../../../../../../lib/libitknetlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKWatershedsCastXML make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/build.make Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/depend make[2]: Entering directory '/<>/BUILD' [ 25%] Built target netlib_tricall make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/MetaIO/CMakeFiles/ITKMetaIO-all.dir/build.make Modules/ThirdParty/MetaIO/CMakeFiles/ITKMetaIO-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/MetaIO /<>/BUILD /<>/BUILD/Modules/ThirdParty/MetaIO /<>/BUILD/Modules/ThirdParty/MetaIO/CMakeFiles/ITKMetaIO-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMetaIO-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/MetaIO/CMakeFiles/ITKMetaIO-all.dir/build.make Modules/ThirdParty/MetaIO/CMakeFiles/ITKMetaIO-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/MetaIO/CMakeFiles/ITKMetaIO-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKMetaIO-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/NrrdIO/CMakeFiles/ITKNrrdIO-all.dir/build.make Modules/ThirdParty/NrrdIO/CMakeFiles/ITKNrrdIO-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/NrrdIO /<>/BUILD /<>/BUILD/Modules/ThirdParty/NrrdIO /<>/BUILD/Modules/ThirdParty/NrrdIO/CMakeFiles/ITKNrrdIO-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNrrdIO-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/NrrdIO/CMakeFiles/ITKNrrdIO-all.dir/build.make Modules/ThirdParty/NrrdIO/CMakeFiles/ITKNrrdIO-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/NrrdIO/CMakeFiles/ITKNrrdIO-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKNrrdIO-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/DICOMParser/CMakeFiles/ITKDICOMParser-all.dir/build.make Modules/ThirdParty/DICOMParser/CMakeFiles/ITKDICOMParser-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/DICOMParser /<>/BUILD /<>/BUILD/Modules/ThirdParty/DICOMParser /<>/BUILD/Modules/ThirdParty/DICOMParser/CMakeFiles/ITKDICOMParser-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDICOMParser-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/DICOMParser/CMakeFiles/ITKDICOMParser-all.dir/build.make Modules/ThirdParty/DICOMParser/CMakeFiles/ITKDICOMParser-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/DICOMParser/CMakeFiles/ITKDICOMParser-all.dir/build'. make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/Netlib/src/netlib/slatec /<>/BUILD /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/DependInfo.cmake --color= Scanning dependencies of target itkNetlibSlatec make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/build.make Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/build make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKDICOMParser-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/OpenJPEG/CMakeFiles/ITKOpenJPEG-all.dir/build.make Modules/ThirdParty/OpenJPEG/CMakeFiles/ITKOpenJPEG-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/OpenJPEG /<>/BUILD /<>/BUILD/Modules/ThirdParty/OpenJPEG /<>/BUILD/Modules/ThirdParty/OpenJPEG/CMakeFiles/ITKOpenJPEG-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOpenJPEG-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/OpenJPEG/CMakeFiles/ITKOpenJPEG-all.dir/build.make Modules/ThirdParty/OpenJPEG/CMakeFiles/ITKOpenJPEG-all.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/c++ -DV3P_NETLIB_SRC -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/netlib_lsqrTest1.dir/lsqrTest1.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests/lsqrTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/d1mach.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Nothing to be done for 'Modules/ThirdParty/OpenJPEG/CMakeFiles/ITKOpenJPEG-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKOpenJPEG-all make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBaseSwig.dir/build.make Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBaseSwig.dir/depend make[3]: Entering directory '/<>/BUILD' [ 25%] Linking CXX executable ../../../../../../../../bin/netlib_lsqrTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Wrapping/Generators/Python/PyBase /<>/BUILD /<>/BUILD/Wrapping/Generators/Python/PyBase /<>/BUILD/Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBaseSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPyBaseSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBaseSwig.dir/build.make Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBaseSwig.dir/build make[3]: Nothing to be done for 'Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBaseSwig.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKPyBaseSwig make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/d1mach.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/d1mach.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/testlib_test_all.dir/test_root_dir.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/test_root_dir.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/d9lgmc.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/d9gmit.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Linking CXX executable ../../../../../../../../bin/testlib_test_all make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/netlib_lsqrTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/netlib_lsqrTest1.dir/lsqrTest1.cxx.o -o ../../../../../../../../bin/netlib_lsqrTest1 ../../../../../../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/d9lgmc.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/d9lgmc.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/d9lgic.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/d9gmit.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/d9gmit.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/d9lgit.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testlib_test_all.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/testlib_test_all.dir/test_driver.cxx.o CMakeFiles/testlib_test_all.dir/test_assert.cxx.o CMakeFiles/testlib_test_all.dir/test_macros.cxx.o CMakeFiles/testlib_test_all.dir/test_args.cxx.o CMakeFiles/testlib_test_all.dir/test_root_dir.cxx.o -o ../../../../../../../../bin/testlib_test_all ../../../../../../../../lib/libitktestlib-4.12.so.1 ../../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBoxSigmaImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkBoxSigmaImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkBruker2DSEQImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/d9lgic.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/d9lgic.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/d9lgit.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/d9lgit.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dbetai.c.o make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonSwig.dir/build.make Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonSwig.dir/depend make[2]: Entering directory '/<>/BUILD' [ 25%] Built target netlib_lsqrTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_include.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_include.dir/depend make[2]: Entering directory '/<>/BUILD' [ 25%] Built target testlib_test_all make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBasePython.dir/build.make Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBasePython.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_include.dir/DependInfo.cmake --color= Scanning dependencies of target testlib_test_include make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_include.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_include.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKCommon /<>/BUILD/Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonSwig.dir/build.make Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 25%] Generating pyBasePython.cpp, ../../../../lib/pyBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/CMakeFiles/testlib_test_include.dir/test_include.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../Typedefs/itkFixedArray.i, ../../Typedefs/itkVector.i, ../../Typedefs/itkCovariantVector.i, ../../Typedefs/itkPoint.i, ../../Typedefs/itkTriangleHelper.i, ../../Typedefs/itkVariableSizeMatrix.i, ../../Typedefs/itkVersor.i, ../../Typedefs/stdcomplex.i, ../../Typedefs/vnl_c_vector.i, ../../Typedefs/vnl_cost_function.i, ../../Typedefs/vnl_diag_matrix.i, ../../Typedefs/vnl_file_matrix.i, ../../Typedefs/vnl_file_vector.i, ../../Typedefs/vnl_fortran_copy.i, ../../Typedefs/vnl_least_squares_function.i, ../../Typedefs/vnl_matrix_fixed.i, ../../Typedefs/vnl_matrix_fixed_ref.i, ../../Typedefs/vnl_matrix_ref.i, ../../Typedefs/vnl_vector_ref.i, ../../Typedefs/vnl_matrix.i, ../../Typedefs/vnl_vector.i, ../../Typedefs/vnl_unary_function.i, ../../Typedefs/ITKCommonBase.i, ../../Typedefs/itkSize.i, ../../Typedefs/itkOffset.i, ../../Typedefs/itkArray.i, ../../Typedefs/itkIndex.i, ../../Typedefs/itkContinuousIndex.i, ../../Typedefs/itkMatrix.i, ../../Typedefs/itkVectorContainer.i, ../../Typedefs/itkMapContainer.i, ../../Typedefs/itkBoundingBox.i, ../../Typedefs/itkRGBPixel.i, ../../Typedefs/itkRGBAPixel.i, ../../Typedefs/itkVariableLengthVector.i, ../../Typedefs/itkImageRegion.i, ../../Typedefs/itkSymmetricSecondRankTensor.i, ../../Typedefs/itkImage.i, ../../Typedefs/itkVectorImage.i, ../../Typedefs/itkNeighborhood.i, ../../Typedefs/itkImageSourceCommon.i, ../../Typedefs/itkImageSource.i, ../../Typedefs/itkImageToImageFilterCommon.i, ../../Typedefs/itkImageToImageFilterA.i, ../../Typedefs/itkImageToImageFilterB.i, ../../Typedefs/itkInPlaceImageFilterA.i, ../../Typedefs/itkInPlaceImageFilterB.i, ../../Typedefs/itkDefaultDynamicMeshTraits.i, ../../Typedefs/itkDefaultStaticMeshTraits.i, ../../Typedefs/itkFunctionBase.i, ../../Typedefs/itkArray2D.i, ../../Typedefs/itkBSplineInterpolationWeightFunction.i, ../../Typedefs/itkDiffusionTensor3D.i, ../../Typedefs/itkExtractImageFilter.i, ../../Typedefs/itkImageBoundaryCondition.i, ../../Typedefs/itkImageDuplicator.i, ../../Typedefs/itkImageTransformer.i, ../../Typedefs/itkImportImageFilter.i, ../../Typedefs/itkKernelFunctionBase.i, ../../Typedefs/itkMetaDataObject.i, ../../Typedefs/itkMinimumMaximumImageCalculator.i, ../../Typedefs/itkNumericTraits.i, ../../Typedefs/itkOptimizerParameters.i, ../../Typedefs/itkPointSet.i, ../../Typedefs/itkSimpleDataObjectDecorator.i, ../../Typedefs/itkSpatialFunction.i, ../../Typedefs/itkSpatialOrientation.i, ../../Typedefs/itkStreamingImageFilter.i, ../../Typedefs/itkFixedArraySwigInterface.h, ../../Typedefs/itkVectorSwigInterface.h, ../../Typedefs/itkCovariantVectorSwigInterface.h, ../../Typedefs/itkPointSwigInterface.h, ../../Typedefs/itkTriangleHelperSwigInterface.h, ../../Typedefs/itkVariableSizeMatrixSwigInterface.h, ../../Typedefs/itkVersorSwigInterface.h, ../../Typedefs/stdcomplexSwigInterface.h, ../../Typedefs/vnl_c_vectorSwigInterface.h, ../../Typedefs/vnl_cost_functionSwigInterface.h, ../../Typedefs/vnl_diag_matrixSwigInterface.h, ../../Typedefs/vnl_file_matrixSwigInterface.h, ../../Typedefs/vnl_file_vectorSwigInterface.h, ../../Typedefs/vnl_fortran_copySwigInterface.h, ../../Typedefs/vnl_least_squares_functionSwigInterface.h, ../../Typedefs/vnl_matrix_fixedSwigInterface.h, ../../Typedefs/vnl_matrix_fixed_refSwigInterface.h, ../../Typedefs/vnl_matrix_refSwigInterface.h, ../../Typedefs/vnl_vector_refSwigInterface.h, ../../Typedefs/vnl_matrixSwigInterface.h, ../../Typedefs/vnl_vectorSwigInterface.h, ../../Typedefs/vnl_unary_functionSwigInterface.h, ../../Typedefs/ITKCommonBaseSwigInterface.h, ../../Typedefs/itkSizeSwigInterface.h, ../../Typedefs/itkOffsetSwigInterface.h, ../../Typedefs/itkArraySwigInterface.h, ../../Typedefs/itkIndexSwigInterface.h, ../../Typedefs/itkContinuousIndexSwigInterface.h, ../../Typedefs/itkMatrixSwigInterface.h, ../../Typedefs/itkVectorContainerSwigInterface.h, ../../Typedefs/itkMapContainerSwigInterface.h, ../../Typedefs/itkBoundingBoxSwigInterface.h, ../../Typedefs/itkRGBPixelSwigInterface.h, ../../Typedefs/itkRGBAPixelSwigInterface.h, ../../Typedefs/itkVariableLengthVectorSwigInterface.h, ../../Typedefs/itkImageRegionSwigInterface.h, ../../Typedefs/itkSymmetricSecondRankTensorSwigInterface.h, ../../Typedefs/itkImageSwigInterface.h, ../../Typedefs/itkVectorImageSwigInterface.h, ../../Typedefs/itkNeighborhoodSwigInterface.h, ../../Typedefs/itkImageSourceCommonSwigInterface.h, ../../Typedefs/itkImageSourceSwigInterface.h, ../../Typedefs/itkImageToImageFilterCommonSwigInterface.h, ../../Typedefs/itkImageToImageFilterASwigInterface.h, ../../Typedefs/itkImageToImageFilterBSwigInterface.h, ../../Typedefs/itkInPlaceImageFilterASwigInterface.h, ../../Typedefs/itkInPlaceImageFilterBSwigInterface.h, ../../Typedefs/itkDefaultDynamicMeshTraitsSwigInterface.h, ../../Typedefs/itkDefaultStaticMeshTraitsSwigInterface.h, ../../Typedefs/itkFunctionBaseSwigInterface.h, ../../Typedefs/itkArray2DSwigInterface.h, ../../Typedefs/itkBSplineInterpolationWeightFunctionSwigInterface.h, ../../Typedefs/itkDiffusionTensor3DSwigInterface.h, ../../Typedefs/itkExtractImageFilterSwigInterface.h, ../../Typedefs/itkImageBoundaryConditionSwigInterface.h, ../../Typedefs/itkImageDuplicatorSwigInterface.h, ../../Typedefs/itkImageTransformerSwigInterface.h, ../../Typedefs/itkImportImageFilterSwigInterface.h, ../../Typedefs/itkKernelFunctionBaseSwigInterface.h, ../../Typedefs/itkMetaDataObjectSwigInterface.h, ../../Typedefs/itkMinimumMaximumImageCalculatorSwigInterface.h, ../../Typedefs/itkNumericTraitsSwigInterface.h, ../../Typedefs/itkOptimizerParametersSwigInterface.h, ../../Typedefs/itkPointSetSwigInterface.h, ../../Typedefs/itkSimpleDataObjectDecoratorSwigInterface.h, ../../Typedefs/itkSpatialFunctionSwigInterface.h, ../../Typedefs/itkSpatialOrientationSwigInterface.h, ../../Typedefs/itkStreamingImageFilterSwigInterface.h, ../../Typedefs/itkFixedArray.idx, ../../Typedefs/itkVector.idx, ../../Typedefs/itkCovariantVector.idx, ../../Typedefs/itkPoint.idx, ../../Typedefs/itkTriangleHelper.idx, ../../Typedefs/itkVariableSizeMatrix.idx, ../../Typedefs/itkVersor.idx, ../../Typedefs/stdcomplex.idx, ../../Typedefs/vnl_c_vector.idx, ../../Typedefs/vnl_cost_function.idx, ../../Typedefs/vnl_diag_matrix.idx, ../../Typedefs/vnl_file_matrix.idx, ../../Typedefs/vnl_file_vector.idx, ../../Typedefs/vnl_fortran_copy.idx, ../../Typedefs/vnl_least_squares_function.idx, ../../Typedefs/vnl_matrix_fixed.idx, ../../Typedefs/vnl_matrix_fixed_ref.idx, ../../Typedefs/vnl_matrix_ref.idx, ../../Typedefs/vnl_vector_ref.idx, ../../Typedefs/vnl_matrix.idx, ../../Typedefs/vnl_vector.idx, ../../Typedefs/vnl_unary_function.idx, ../../Typedefs/ITKCommonBase.idx, ../../Typedefs/itkSize.idx, ../../Typedefs/itkOffset.idx, ../../Typedefs/itkArray.idx, ../../Typedefs/itkIndex.idx, ../../Typedefs/itkContinuousIndex.idx, ../../Typedefs/itkMatrix.idx, ../../Typedefs/itkVectorContainer.idx, ../../Typedefs/itkMapContainer.idx, ../../Typedefs/itkBoundingBox.idx, ../../Typedefs/itkRGBPixel.idx, ../../Typedefs/itkRGBAPixel.idx, ../../Typedefs/itkVariableLengthVector.idx, ../../Typedefs/itkImageRegion.idx, ../../Typedefs/itkSymmetricSecondRankTensor.idx, ../../Typedefs/itkImage.idx, ../../Typedefs/itkVectorImage.idx, ../../Typedefs/itkNeighborhood.idx, ../../Typedefs/itkImageSourceCommon.idx, ../../Typedefs/itkImageSource.idx, ../../Typedefs/itkImageToImageFilterCommon.idx, ../../Typedefs/itkImageToImageFilterA.idx, ../../Typedefs/itkImageToImageFilterB.idx, ../../Typedefs/itkInPlaceImageFilterA.idx, ../../Typedefs/itkInPlaceImageFilterB.idx, ../../Typedefs/itkDefaultDynamicMeshTraits.idx, ../../Typedefs/itkDefaultStaticMeshTraits.idx, ../../Typedefs/itkFunctionBase.idx, ../../Typedefs/itkArray2D.idx, ../../Typedefs/itkBSplineInterpolationWeightFunction.idx, ../../Typedefs/itkDiffusionTensor3D.idx, ../../Typedefs/itkExtractImageFilter.idx, ../../Typedefs/itkImageBoundaryCondition.idx, ../../Typedefs/itkImageDuplicator.idx, ../../Typedefs/itkImageTransformer.idx, ../../Typedefs/itkImportImageFilter.idx, ../../Typedefs/itkKernelFunctionBase.idx, ../../Typedefs/itkMetaDataObject.idx, ../../Typedefs/itkMinimumMaximumImageCalculator.idx, ../../Typedefs/itkNumericTraits.idx, ../../Typedefs/itkOptimizerParameters.idx, ../../Typedefs/itkPointSet.idx, ../../Typedefs/itkSimpleDataObjectDecorator.idx, ../../Typedefs/itkSpatialFunction.idx, ../../Typedefs/itkSpatialOrientation.idx, ../../Typedefs/itkStreamingImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/dbetai.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/dbetai.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dcsevl.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/dcsevl.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/dcsevl.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dgami.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/dgami.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/dgami.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dgamit.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/testlib_test_include.dir/test_include.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests/test_include.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Linking CXX executable ../../../../../../../../bin/testlib_test_include make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/dgamit.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/dgamit.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_copy.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_copy.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dgamlm.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_error.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/testlib/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/testlib_test_include.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/testlib_test_include.dir/test_include.cxx.o -o ../../../../../../../../bin/testlib_test_include ../../../../../../../../lib/libitktestlib-4.12.so.1 ../../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target testlib_test_include make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/dgamlm.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/dgamlm.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_matlab_print_format.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dgamma.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/dgamma.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/dgamma.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dgamr.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/dgamr.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/dgamr.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dlbeta.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/dlbeta.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/dlbeta.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dlgams.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_error.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_error.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_matlab_print_scalar.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/dlgams.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/dlgams.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dlngam.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_matlab_print_format.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_matlab_print_format.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_matlab_write.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/dlngam.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/dlngam.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/dlnrel.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/dlnrel.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/dlnrel.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/initds.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/initds.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/initds.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/xermsg.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_matlab_print_scalar.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_matlab_print_scalar.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_matlab_read.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/xermsg.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/xermsg.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/d_int.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkBruker2DSEQImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkBruker2DSEQImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/d_int.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/d_int.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building C object Modules/ThirdParty/Netlib/src/netlib/slatec/CMakeFiles/itkNetlibSlatec.dir/d_mod.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkContourExtractor2DImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_matlab_write.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_matlab_write.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_matlab_filewrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cc -DitkNetlibSlatec_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/Netlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -fPIC -o CMakeFiles/itkNetlibSlatec.dir/d_mod.c.o -c /<>/Modules/ThirdParty/Netlib/src/netlib/slatec/d_mod.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Linking C shared library ../../../../../../lib/libitkNetlibSlatec-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkNetlibSlatec.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libitkNetlibSlatec-4.12.so.1 -o ../../../../../../lib/libitkNetlibSlatec-4.12.so.1 CMakeFiles/itkNetlibSlatec.dir/d1mach.c.o CMakeFiles/itkNetlibSlatec.dir/d9lgmc.c.o CMakeFiles/itkNetlibSlatec.dir/d9gmit.c.o CMakeFiles/itkNetlibSlatec.dir/d9lgic.c.o CMakeFiles/itkNetlibSlatec.dir/d9lgit.c.o CMakeFiles/itkNetlibSlatec.dir/dbetai.c.o CMakeFiles/itkNetlibSlatec.dir/dcsevl.c.o CMakeFiles/itkNetlibSlatec.dir/dgami.c.o CMakeFiles/itkNetlibSlatec.dir/dgamit.c.o CMakeFiles/itkNetlibSlatec.dir/dgamlm.c.o CMakeFiles/itkNetlibSlatec.dir/dgamma.c.o CMakeFiles/itkNetlibSlatec.dir/dgamr.c.o CMakeFiles/itkNetlibSlatec.dir/dlbeta.c.o CMakeFiles/itkNetlibSlatec.dir/dlgams.c.o CMakeFiles/itkNetlibSlatec.dir/dlngam.c.o CMakeFiles/itkNetlibSlatec.dir/dlnrel.c.o CMakeFiles/itkNetlibSlatec.dir/initds.c.o CMakeFiles/itkNetlibSlatec.dir/xermsg.c.o CMakeFiles/itkNetlibSlatec.dir/d_int.c.o CMakeFiles/itkNetlibSlatec.dir/d_mod.c.o ../../../../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/Netlib/src/netlib/slatec && /usr/bin/cmake -E cmake_symlink_library ../../../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../../../lib/libitkNetlibSlatec-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 25%] Built target itkNetlibSlatec make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/Netlib/CMakeFiles/ITKNetlib-all.dir/build.make Modules/ThirdParty/Netlib/CMakeFiles/ITKNetlib-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/Netlib /<>/BUILD /<>/BUILD/Modules/ThirdParty/Netlib /<>/BUILD/Modules/ThirdParty/Netlib/CMakeFiles/ITKNetlib-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNetlib-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/Netlib/CMakeFiles/ITKNetlib-all.dir/build.make Modules/ThirdParty/Netlib/CMakeFiles/ITKNetlib-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/Netlib/CMakeFiles/ITKNetlib-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 25%] Built target ITKNetlib-all make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_algorithm.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_algorithm.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_cctype.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_cmath.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_cctype.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_cctype.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_compiler.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_matlab_read.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_matlab_read.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_matops.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_matlab_filewrite.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_matlab_filewrite.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_real_polynomial.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_cmath.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_cmath.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_complex.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_matops.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_matops.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_real_npolynomial.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMutualInformationImageToImageMetric.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkMutualInformationImageToImageMetric.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkNormalizedCorrelationImageToImageMetric.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_compiler.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_compiler.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_deque.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_real_polynomial.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_real_polynomial.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_rational.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_complex.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_complex.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_exception.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_deque.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_deque.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_fstream.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_exception.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_exception.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_iostream.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_rational.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_rational.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_bignum.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_fstream.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_fstream.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_iterator.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_real_npolynomial.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_real_npolynomial.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_decnum.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_iostream.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_iostream.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_list.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_iterator.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_iterator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_limits.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkContourExtractor2DImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkContourExtractor2DImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Generating ../../itkDiffeomorphicDemonsRegistrationFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_list.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_list.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_map.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_limits.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_limits.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_memory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_map.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_map.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_decnum.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_decnum.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_multimap.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_fastops.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_memory.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_memory.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_new.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_new.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_new.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_set.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_multimap.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_multimap.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_stlfwd.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_fastops.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_fastops.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_numeric_traits.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_bignum.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_bignum.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_bignum_traits.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_set.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_set.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_string.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_stlfwd.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_stlfwd.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_sstream.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_numeric_traits.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_numeric_traits.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_decnum_traits.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_string.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_string.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_vector.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_bignum_traits.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_bignum_traits.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_rational_traits.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_sstream.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_sstream.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_cstdio.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_cstdio.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_cstdio.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_preprocessor.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_decnum_traits.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_decnum_traits.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 25%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_int_matrix.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_preprocessor.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_preprocessor.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 26%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_atomic_count.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_rational_traits.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_rational_traits.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 26%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_cost_function.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_atomic_count.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_atomic_count.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 26%] Building CXX object Modules/ThirdParty/VNL/src/vxl/vcl/tests/CMakeFiles/vcl_test_all.dir/test_typename.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_typename.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_typename.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 26%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_least_squares_function.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vcl_test_all.dir/test_vector.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/vcl/tests/test_vector.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 26%] Linking CXX executable ../../../../../../../bin/vcl_test_all make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkNormalizedCorrelationImageToImageMetric.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkNormalizedCorrelationImageToImageMetric.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/vcl_test_all.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/vcl_test_all.dir/test_driver.cxx.o CMakeFiles/vcl_test_all.dir/test_algorithm.cxx.o CMakeFiles/vcl_test_all.dir/test_cctype.cxx.o CMakeFiles/vcl_test_all.dir/test_cmath.cxx.o CMakeFiles/vcl_test_all.dir/test_compiler.cxx.o CMakeFiles/vcl_test_all.dir/test_complex.cxx.o CMakeFiles/vcl_test_all.dir/test_deque.cxx.o CMakeFiles/vcl_test_all.dir/test_exception.cxx.o CMakeFiles/vcl_test_all.dir/test_fstream.cxx.o CMakeFiles/vcl_test_all.dir/test_iostream.cxx.o CMakeFiles/vcl_test_all.dir/test_iterator.cxx.o CMakeFiles/vcl_test_all.dir/test_list.cxx.o CMakeFiles/vcl_test_all.dir/test_limits.cxx.o CMakeFiles/vcl_test_all.dir/test_map.cxx.o CMakeFiles/vcl_test_all.dir/test_memory.cxx.o CMakeFiles/vcl_test_all.dir/test_multimap.cxx.o CMakeFiles/vcl_test_all.dir/test_new.cxx.o CMakeFiles/vcl_test_all.dir/test_set.cxx.o CMakeFiles/vcl_test_all.dir/test_stlfwd.cxx.o CMakeFiles/vcl_test_all.dir/test_string.cxx.o CMakeFiles/vcl_test_all.dir/test_sstream.cxx.o CMakeFiles/vcl_test_all.dir/test_vector.cxx.o CMakeFiles/vcl_test_all.dir/test_cstdio.cxx.o CMakeFiles/vcl_test_all.dir/test_preprocessor.cxx.o CMakeFiles/vcl_test_all.dir/test_atomic_count.cxx.o CMakeFiles/vcl_test_all.dir/test_typename.cxx.o -o ../../../../../../../bin/vcl_test_all ../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 26%] Generating ../../itkPDEDeformableRegistrationFunction.xml make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 26%] Built target vcl_test_all make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_int_matrix.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_int_matrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_sparse_lst_sqr_function.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_least_squares_cost_function.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_cost_function.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_cost_function.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_nonlinear_minimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_least_squares_function.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_least_squares_function.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_linear_system.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_least_squares_cost_function.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_least_squares_cost_function.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_sparse_matrix_linear_system.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_nonlinear_minimizer.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_nonlinear_minimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_rotation_matrix.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_linear_system.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_linear_system.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_crs_index.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_sparse_lst_sqr_function.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_sparse_lst_sqr_function.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_bessel.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_rotation_matrix.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_rotation_matrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_gamma.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_crs_index.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_crs_index.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_erf.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_bessel.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_bessel.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_sparse_matrix_linear_system.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_sparse_matrix_linear_system.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_random.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_sample.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_erf.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_erf.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/vnl_definite_integral.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDiffeomorphicDemonsRegistrationFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkDiffeomorphicDemonsRegistrationFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_definite_integral.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_definite_integral.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_sample.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_sample.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_random.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_random.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkDirectFourierReconstructionImageToImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_na_vector+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_na_vector+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/vnl_gamma.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_gamma.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+double_complex-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkPDEDeformableRegistrationFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkPDEDeformableRegistrationFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkRecursiveMultiResolutionPyramidImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_na_vector+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_na_vector+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_na_vector+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_na_vector+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+float_complex-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+double_complex-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+double_complex-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+long-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+float_complex-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+float_complex-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+long_double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+long_double_complex-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDirectFourierReconstructionImageToImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkDirectFourierReconstructionImageToImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkDiscreteGaussianDerivativeImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+longlong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRecursiveMultiResolutionPyramidImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkRecursiveMultiResolutionPyramidImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkTransformParametersAdaptorBase.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+long-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+long-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+schar-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+long_double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+long_double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+uchar-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+long_double_complex-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+long_double_complex-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+uint-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+schar-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+schar-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+ulong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+longlong-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+longlong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+ulonglong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+uchar-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+uchar-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+ushort-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkTransformParametersAdaptorBase.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKRegistrationCommon.castxml.inc /<>/BUILD/Wrapping/itkTransformParametersAdaptorBase.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 27%] Built target ITKRegistrationCommonCastXML make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+vnl_bignum-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkDiscreteGaussianDerivativeImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkDiscreteGaussianDerivativeImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkESMDemonsRegistrationFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+uint-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+uint-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+vnl_rational-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+ulong-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+ulong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_complex_ops+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+ulonglong-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+ulonglong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_complex_ops+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_complex_ops+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_complex_ops+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_complex_ops+long_double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+vnl_bignum-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+vnl_bignum-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+ushort-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+ushort-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_det+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_det+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_complex_ops+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_complex_ops+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_det+long_double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+vnl_rational-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_c_vector+vnl_rational-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_det+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_det+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_det+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_det+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_det+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_det+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_det+vcl_complex+long_double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_det+long_double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_det+long_double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_det+vnl_bignum-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_complex_ops+long_double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_complex_ops+long_double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_det+vnl_rational-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_det+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_det+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_det+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_det+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_det+vcl_complex+long_double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_det+vcl_complex+long_double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_diag_matrix+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+long_double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_diag_matrix+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_det+vnl_bignum-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_det+vnl_bignum-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_det+vnl_rational-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_det+vnl_rational-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+vnl_bignum-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_diag_matrix+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_diag_matrix+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+vnl_rational-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix_fixed+double.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+long_double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_diag_matrix+long_double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix_fixed+double.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_diag_matrix+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix_fixed+float.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+vnl_bignum-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_diag_matrix+vnl_bignum-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix_fixed+double.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_diag_matrix_fixed+double.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix_fixed+float.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+vnl_rational-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_diag_matrix+vnl_rational-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix_fixed+double.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_diag_matrix_fixed+double.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+long_double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix_fixed+float.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_diag_matrix_fixed+float.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+vnl_rational-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix_fixed+float.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_diag_matrix_fixed+float.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_file_vector+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_file_matrix+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_file_matrix+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+vnl_rational-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_file_matrix+vnl_rational-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+long_double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+long_double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_file_matrix+long_double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_fortran_copy+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkESMDemonsRegistrationFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkESMDemonsRegistrationFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_file_vector+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_file_vector+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkFastApproximateRankImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+vcl_complex+long_double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_fortran_copy+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkFastSymmetricForcesDemonsRegistrationFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+long_double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_fortran_copy+long_double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy_fixed+double.3.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_fortran_copy+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy_fixed+double.3.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+vcl_complex+long_double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_fortran_copy+vcl_complex+long_double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_fortran_copy+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy_fixed+float.3.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkGridForwardWarpImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy_fixed+double.3.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_fortran_copy_fixed+double.3.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy_fixed+double.3.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_fortran_copy_fixed+double.3.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_hungarian_algorithm+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy_fixed+float.3.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy_fixed+float.3.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_fortran_copy_fixed+float.3.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_hungarian_algorithm+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy_fixed+float.3.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_fortran_copy_fixed+float.3.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_identity+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_identity+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_identity+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_hungarian_algorithm+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_hungarian_algorithm+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_hungarian_algorithm+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_hungarian_algorithm+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+long_double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+uint-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+long_double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print+long_double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFastApproximateRankImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkFastApproximateRankImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkJPEG2000ImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkGridForwardWarpImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkGridForwardWarpImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkLabelGeometryImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+vcl_complex+long_double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+uint-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print+uint-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_matrix+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_matrix+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print2+vnl_matrix+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_matrix+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_matrix+vcl_complex+double---.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_matrix+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print2+vnl_matrix+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_vector+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_vector+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print2+vnl_vector+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_vector+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_vector+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print2+vnl_vector+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_vector+vcl_complex+double---.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_matrix+vcl_complex+double---.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print2+vnl_matrix+vcl_complex+double---.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+vcl_complex+long_double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print+vcl_complex+long_double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_vector+vcl_complex+double---.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matlab_print2+vnl_vector+vcl_complex+double---.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkJPEG2000ImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkJPEG2000ImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkMaskedRankImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Generators/Python/PyBase/pyBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/pyBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ITKPyBasePython.cpp, ../../../../lib/ITKPyBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Generators/Python/PyBase/ITKPyBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKPyBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Wrapping/Generators/Python/PyBase /<>/BUILD /<>/BUILD/Wrapping/Generators/Python/PyBase /<>/BUILD/Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBasePython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPyBasePython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBasePython.dir/build.make Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBasePython.dir/build make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBasePython.dir/ITKPyBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python/PyBase && /usr/bin/c++ -DITKPyBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Wrapping/Generators/Python/PyBase -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPyBasePython.dir/ITKPyBasePython.cpp.o -c /<>/BUILD/Wrapping/Generators/Python/PyBase/ITKPyBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Wrapping/Generators/Python/PyBase/CMakeFiles/ITKPyBasePython.dir/pyBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+long-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+long_double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+longlong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkFastSymmetricForcesDemonsRegistrationFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkFastSymmetricForcesDemonsRegistrationFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkMultiScaleHessianBasedMeasureImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMaskedRankImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkMaskedRankImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkRankImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+long-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+long-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+schar-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+long_double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+long_double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+uchar-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+longlong-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+longlong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+uint-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkLabelGeometryImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkLabelGeometryImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 27%] Generating ../../itkRobustAutomaticThresholdImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+schar-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+schar-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+ulong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+uchar-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+uchar-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+ulonglong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkMultiScaleHessianBasedMeasureImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkMultiScaleHessianBasedMeasureImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Generating ../../itkScalarChanAndVeseDenseLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+uint-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+uint-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+ushort-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRankImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkRankImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Generating ../../itkScalarChanAndVeseLevelSetFunction.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkRobustAutomaticThresholdImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkRobustAutomaticThresholdImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Generating ../../itkScalarChanAndVeseSparseLevelSetImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+ulong-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+ulong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+ulonglong-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+ulonglong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+ushort-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+ushort-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vcl_complex+long_double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScalarChanAndVeseLevelSetFunction.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkScalarChanAndVeseLevelSetFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Generating ../../itkStochasticFractalDimensionImageFilter.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScalarChanAndVeseDenseLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkScalarChanAndVeseDenseLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Generating ../../itkVoxBoCUBImageIO.xml make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vnl_bignum-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vnl_rational-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vcl_complex+long_double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+vcl_complex+long_double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_exp+vnl_matrix+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.1.1--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkVoxBoCUBImageIO.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkVoxBoCUBImageIO.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.2.2--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.1.1--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.1.1--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.3.3--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vnl_bignum-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+vnl_bignum-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.4.4--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkStochasticFractalDimensionImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkStochasticFractalDimensionImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.1.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.2.2--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.2.2--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.1.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.3.3--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.3.3--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.1.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.4.4--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.4.4--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.1.6-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/castxml -o /<>/BUILD/Wrapping/itkScalarChanAndVeseSparseLevelSetImageFilter.xml --castxml-gccxml --castxml-start _wrapping_ --castxml-cc-gnu "(" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual ")" -w -c @/<>/BUILD/Wrapping/ITKReview.castxml.inc /<>/BUILD/Wrapping/itkScalarChanAndVeseSparseLevelSetImageFilter.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 28%] Built target ITKReviewCastXML make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.1.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.1.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.11-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.1.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.1.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vnl_rational-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix+vnl_rational-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.2.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.1.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.1.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.1.6-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.1.6-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.6-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.8-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.2.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.9-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.11-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.2.11-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.2.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.2.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.8-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.2.8-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.6-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.2.6-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.6-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.9-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.2.9-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.9-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.3.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.3.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.3.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.20-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.6-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.3.6-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.3.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.4.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.6.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.4.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.6.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.9-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.3.9-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.6.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.4.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.6.6-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.4.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.1.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.20-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.4.20-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.1.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.6.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.6.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.1.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.6.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.6.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.2.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.6.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.6.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.2.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.1.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.1.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.2.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.1.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.1.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.2.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.6.6-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+double.6.6-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.1.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.1.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.3.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.3.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.2.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.2.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.3.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.2.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.2.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.3.5-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.2.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.2.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.4.20-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.3.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.3.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.2.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.2.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.4.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.4.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.3.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.3.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.5.5-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.3.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.3.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.6.6-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.3.5-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.3.5-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+int.1.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.4.20-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.4.20-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+int.2.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.4.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.4.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+int.3.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.5.5-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.5.5-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+vnl_bignum.3.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.4.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.4.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+vnl_rational.3.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+int.1.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+int.1.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+vnl_rational.4.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+int.2.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+int.2.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed_ref+double.3.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.6.6-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+float.6.6-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed_ref+double.3.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+int.3.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+int.3.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed_ref+float.3.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+vnl_rational.3.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+vnl_rational.3.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed_ref+float.3.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+vnl_bignum.3.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+vnl_bignum.3.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_ref+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed_ref+double.3.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed_ref+double.3.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_ref+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed_ref+double.3.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed_ref+double.3.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_ref+vnl_bignum-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+vnl_rational.4.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed+vnl_rational.4.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_matrix_ref+vnl_rational-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_ref+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_ref+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_polynomial+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_ref+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_ref+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_polynomial+long-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_ref+vnl_bignum-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_ref+vnl_bignum-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_polynomial+vnl_decnum-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed_ref+float.3.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed_ref+float.3.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_polynomial+vnl_rational-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed_ref+float.3.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_fixed_ref+float.3.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_quaternion+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_ref+vnl_rational-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_matrix_ref+vnl_rational-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_quaternion+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_polynomial+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_polynomial+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_quaternion+vnl_rational-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_polynomial+long-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_polynomial+long-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_rank+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_quaternion+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_quaternion+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_rank+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_quaternion+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_quaternion+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_polynomial+vnl_rational-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_polynomial+vnl_rational-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_rank+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_rank+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_polynomial+vnl_decnum-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_polynomial+vnl_decnum-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_rank+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_rank+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_quaternion+vnl_rational-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_quaternion+vnl_rational-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+vnl_bignum-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sparse_matrix+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+vnl_rational-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sparse_matrix+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sparse_matrix+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sparse_matrix+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sparse_matrix+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sym_matrix+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sym_matrix+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+vcl_complex+long_double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sym_matrix+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_unary_function+double.vnl_vector+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sym_matrix+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_unary_function+int.int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_unary_function+int.int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_unary_function+int.int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 28%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+vnl_bignum-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sparse_matrix+vnl_bignum-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sym_matrix+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+vcl_complex+long_double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sym_matrix+vcl_complex+long_double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_unary_function+double.vnl_vector+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_unary_function+double.vnl_vector+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+long-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+long_double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+vnl_rational-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_sparse_matrix+vnl_rational-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+longlong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+schar-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+uchar-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+long_double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+long_double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+uint-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+long-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+long-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+ulonglong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+ulong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+longlong-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+longlong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+ushort-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+schar-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+schar-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+uchar-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+uchar-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+ulong-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+ulong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+vcl_complex+long_double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+uint-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+uint-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+vnl_bignum-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+ulonglong-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+ulonglong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector+vnl_rational-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+ushort-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+ushort-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.10-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+vcl_complex+long_double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+vcl_complex+long_double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+vnl_bignum-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+vnl_bignum-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+double.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.20-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.10-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+double.10-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.5-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector+vnl_rational-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector+vnl_rational-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.6-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+double.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.9-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.20-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+double.20-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+double.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.10-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+double.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.16-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.5-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+double.5-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.6-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+double.6-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.9-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+double.9-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.10-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+float.10-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.5-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+float.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.9-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.16-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+float.16-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+int.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+float.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+int.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+float.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+int.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+float.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+int.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.9-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+float.9-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.5-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+float.5-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+int.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+int.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+uchar.16-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+ushort.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_bignum.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+int.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+int.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_bignum.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+int.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+int.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_bignum.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+int.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+int.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_rational.1-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+uchar.16-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+uchar.16-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_rational.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+ushort.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+ushort.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_rational.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_bignum.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+vnl_bignum.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_rational.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_bignum.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+vnl_bignum.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed_ref+double.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_bignum.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+vnl_bignum.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed_ref+double.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_rational.1-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+vnl_rational.1-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed_ref+float.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_rational.2-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+vnl_rational.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_rational.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+vnl_rational.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_rational.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed+vnl_rational.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed_ref+double.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed_ref+double.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed_ref+double.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed_ref+double.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed_ref+float.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/Templates/vnl_vector_fixed_ref+float.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Linking CXX shared library ../../../../../../../lib/libitkvnl-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkvnl.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libitkvnl-4.12.so.1 -o ../../../../../../../lib/libitkvnl-4.12.so.1 CMakeFiles/itkvnl.dir/vnl_alloc.cxx.o CMakeFiles/itkvnl.dir/vnl_block.cxx.o CMakeFiles/itkvnl.dir/vnl_math.cxx.o CMakeFiles/itkvnl.dir/vnl_na.cxx.o CMakeFiles/itkvnl.dir/vnl_copy.cxx.o CMakeFiles/itkvnl.dir/vnl_error.cxx.o CMakeFiles/itkvnl.dir/vnl_matlab_print_format.cxx.o CMakeFiles/itkvnl.dir/vnl_matlab_print_scalar.cxx.o CMakeFiles/itkvnl.dir/vnl_matlab_write.cxx.o CMakeFiles/itkvnl.dir/vnl_matlab_read.cxx.o CMakeFiles/itkvnl.dir/vnl_matlab_filewrite.cxx.o CMakeFiles/itkvnl.dir/vnl_matops.cxx.o CMakeFiles/itkvnl.dir/vnl_real_polynomial.cxx.o CMakeFiles/itkvnl.dir/vnl_real_npolynomial.cxx.o CMakeFiles/itkvnl.dir/vnl_rational.cxx.o CMakeFiles/itkvnl.dir/vnl_bignum.cxx.o CMakeFiles/itkvnl.dir/vnl_decnum.cxx.o CMakeFiles/itkvnl.dir/vnl_fastops.cxx.o CMakeFiles/itkvnl.dir/vnl_numeric_traits.cxx.o CMakeFiles/itkvnl.dir/vnl_bignum_traits.cxx.o CMakeFiles/itkvnl.dir/vnl_decnum_traits.cxx.o CMakeFiles/itkvnl.dir/vnl_rational_traits.cxx.o CMakeFiles/itkvnl.dir/vnl_int_matrix.cxx.o CMakeFiles/itkvnl.dir/vnl_cost_function.cxx.o CMakeFiles/itkvnl.dir/vnl_least_squares_function.cxx.o CMakeFiles/itkvnl.dir/vnl_least_squares_cost_function.cxx.o CMakeFiles/itkvnl.dir/vnl_sparse_lst_sqr_function.cxx.o CMakeFiles/itkvnl.dir/vnl_nonlinear_minimizer.cxx.o CMakeFiles/itkvnl.dir/vnl_linear_system.cxx.o CMakeFiles/itkvnl.dir/vnl_sparse_matrix_linear_system.cxx.o CMakeFiles/itkvnl.dir/vnl_rotation_matrix.cxx.o CMakeFiles/itkvnl.dir/vnl_crs_index.cxx.o CMakeFiles/itkvnl.dir/vnl_bessel.cxx.o CMakeFiles/itkvnl.dir/vnl_gamma.cxx.o CMakeFiles/itkvnl.dir/vnl_erf.cxx.o CMakeFiles/itkvnl.dir/vnl_sample.cxx.o CMakeFiles/itkvnl.dir/vnl_random.cxx.o CMakeFiles/itkvnl.dir/vnl_definite_integral.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_na_vector+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_na_vector+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+double_complex-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+float_complex-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+int-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+long-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+long_double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+long_double_complex-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+longlong-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+schar-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+uchar-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+uint-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+ulong-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+ulonglong-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+ushort-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+vnl_bignum-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_c_vector+vnl_rational-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_complex_ops+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_complex_ops+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_complex_ops+long_double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_det+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_det+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_det+long_double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_det+vcl_complex+double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_det+vcl_complex+float--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_det+vcl_complex+long_double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_det+vnl_bignum-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_det+vnl_rational-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+int-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+long_double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+vcl_complex+double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+vcl_complex+float--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+vnl_bignum-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix+vnl_rational-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix_fixed+double.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix_fixed+double.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix_fixed+float.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_diag_matrix_fixed+float.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+long_double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_file_matrix+vnl_rational-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_file_vector+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+long_double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+vcl_complex+double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+vcl_complex+float--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy+vcl_complex+long_double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy_fixed+double.3.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy_fixed+double.3.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy_fixed+float.3.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_fortran_copy_fixed+float.3.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_hungarian_algorithm+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_hungarian_algorithm+int-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_identity+int-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+int-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+long_double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+uint-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+vcl_complex+double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+vcl_complex+float--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print+vcl_complex+long_double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_matrix+double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_matrix+float--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_matrix+vcl_complex+double---.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_vector+double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_vector+float--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matlab_print2+vnl_vector+vcl_complex+double---.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+int-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+long-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+long_double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+longlong-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+schar-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+uchar-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+uint-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+ulong-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+ulonglong-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+ushort-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vcl_complex+double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vcl_complex+float--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vcl_complex+long_double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vnl_bignum-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix+vnl_rational-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix+double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.1.1--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.2.2--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.3.3--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_exp+vnl_matrix_fixed+double.4.4--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.1.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.1.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.1.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.1.6-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.11-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.6-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.8-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.2.9-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.6-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.3.9-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.20-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.4.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.6.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.6.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.6.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+double.6.6-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.1.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.1.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.1.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.2.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.2.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.2.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.2.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.3.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.3.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.3.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.3.5-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.4.20-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.4.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.4.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.5.5-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+float.6.6-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+int.1.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+int.2.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+int.3.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+vnl_bignum.3.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+vnl_rational.3.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed+vnl_rational.4.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed_ref+double.3.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed_ref+double.3.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed_ref+float.3.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_fixed_ref+float.3.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_ref+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_ref+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_ref+vnl_bignum-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_matrix_ref+vnl_rational-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_polynomial+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_polynomial+long-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_polynomial+vnl_decnum-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_polynomial+vnl_rational-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_quaternion+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_quaternion+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_quaternion+vnl_rational-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_rank+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_rank+int-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+int-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+vcl_complex+double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+vcl_complex+float--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+vnl_bignum-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sparse_matrix+vnl_rational-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+int-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+vcl_complex+double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+vcl_complex+float--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_sym_matrix+vcl_complex+long_double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_unary_function+double.vnl_vector+double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_unary_function+int.int-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+float-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+int-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+long-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+long_double-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+longlong-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+schar-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+uchar-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+uint-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+ulong-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+ulonglong-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+ushort-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+vcl_complex+double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+vcl_complex+float--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+vcl_complex+long_double--.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+vnl_bignum-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector+vnl_rational-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.10-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.20-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.5-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.6-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+double.9-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.10-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.16-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.5-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+float.9-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+int.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+int.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+int.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+int.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+uchar.16-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+ushort.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_bignum.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_bignum.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_bignum.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_rational.1-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_rational.2-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_rational.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed+vnl_rational.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed_ref+double.3-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed_ref+double.4-.cxx.o CMakeFiles/itkvnl.dir/Templates/vnl_vector_fixed_ref+float.3-.cxx.o ../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl && /usr/bin/cmake -E cmake_symlink_library ../../../../../../../lib/libitkvnl-4.12.so.1 ../../../../../../../lib/libitkvnl-4.12.so.1 ../../../../../../../lib/libitkvnl-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 29%] Built target itkvnl make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_basic_operation_timings.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_basic_operation_timings.dir/depend make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/depend make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_include.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_include.dir/depend make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_template_include.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_template_include.dir/depend make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_basic_operation_timings.dir/DependInfo.cmake --color= Scanning dependencies of target vnl_basic_operation_timings make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_basic_operation_timings.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_basic_operation_timings.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_include.dir/DependInfo.cmake --color= Scanning dependencies of target vnl_test_include make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_include.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_include.dir/build make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_basic_operation_timings.dir/basic_operation_timings.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_include.dir/test_include.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_template_include.dir/DependInfo.cmake --color= Scanning dependencies of target vnl_test_template_include make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_template_include.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_template_include.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/DependInfo.cmake --color= Scanning dependencies of target vnl_test_all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/build make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_template_include.dir/test_template_include.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_driver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_bignum.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/DependInfo.cmake --color= Scanning dependencies of target itkvnl_algo make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/build make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_cholesky.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_driver.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_driver.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_decnum.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_include.dir/test_include.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_include.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Linking CXX executable ../../../../../../../../bin/vnl_test_include make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/vnl_test_include.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/vnl_test_include.dir/test_include.cxx.o -o ../../../../../../../../bin/vnl_test_include ../../../../../../../../lib/libitkvnl-4.12.so.1 ../../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 29%] Built target vnl_test_include make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_complex.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_cholesky.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_cholesky.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 29%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_ldl_cholesky.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_template_include.dir/test_template_include.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_template_include.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Linking CXX executable ../../../../../../../../bin/vnl_test_template_include make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/vnl_test_template_include.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/vnl_test_template_include.dir/test_template_include.cxx.o -o ../../../../../../../../bin/vnl_test_template_include ../../../../../../../../lib/libitkvnl-4.12.so.1 ../../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 30%] Built target vnl_test_template_include make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_sparse_lu.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_basic_operation_timings.dir/basic_operation_timings.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/basic_operation_timings.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Linking CXX executable ../../../../../../../../bin/vnl_basic_operation_timings make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_complex.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_complex.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_complexify.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/vnl_basic_operation_timings.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/vnl_basic_operation_timings.dir/basic_operation_timings.cxx.o -o ../../../../../../../../bin/vnl_basic_operation_timings ../../../../../../../../lib/libitkvnl-4.12.so.1 ../../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 30%] Built target vnl_basic_operation_timings make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_real_eigensystem.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_ldl_cholesky.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_ldl_cholesky.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_complex_eigensystem.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_sparse_lu.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_sparse_lu.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_generalized_eigensystem.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_real_eigensystem.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_real_eigensystem.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_complex_eigensystem.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_complex_eigensystem.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_generalized_schur.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_sparse_symmetric_eigensystem.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_generalized_eigensystem.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_generalized_eigensystem.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_complex_generalized_schur.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_complexify.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_complexify.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_inverse.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_generalized_schur.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_generalized_schur.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_discrete_diff.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_sparse_symmetric_eigensystem.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_sparse_symmetric_eigensystem.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_complex_generalized_schur.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_complex_generalized_schur.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_levenberg_marquardt.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_sparse_lm.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_discrete_diff.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_discrete_diff.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_conjugate_gradient.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_bignum.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_bignum.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_diag_matrix.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_levenberg_marquardt.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_levenberg_marquardt.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_lbfgs.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_inverse.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_inverse.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_diag_matrix_fixed.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_conjugate_gradient.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_conjugate_gradient.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_lbfgsb.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_diag_matrix.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_diag_matrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_file_matrix.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_decnum.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_decnum.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_finite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_lbfgs.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_lbfgs.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_amoeba.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_sparse_lm.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_sparse_lm.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_powell.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_file_matrix.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_file_matrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_lbfgsb.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_lbfgsb.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_brent.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_math.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_diag_matrix_fixed.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_diag_matrix_fixed.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_na.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_brent.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_brent.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_lsqr.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_powell.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_powell.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_solve_qp.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_amoeba.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_amoeba.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_bracket_minimum.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_lsqr.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_lsqr.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_brent_minimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_solve_qp.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_solve_qp.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_rpoly_roots.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_bracket_minimum.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_bracket_minimum.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_cpoly_roots.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_math.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_math.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_brent_minimizer.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_brent_minimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_matrix.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_rnpoly_solve.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_rpoly_roots.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_rpoly_roots.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_fft.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_na.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_na.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_cpoly_roots.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_cpoly_roots.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_container_interface.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_determinant.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_fft.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_fft.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_gaussian_kernel_1d.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_determinant.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_determinant.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_simpson_integral.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_container_interface.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_container_interface.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_matrix_exp.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_gaussian_kernel_1d.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_gaussian_kernel_1d.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/vnl_adaptsimpson_integral.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_simpson_integral.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_simpson_integral.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_adjugate+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_matrix.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_matrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_matrix_fixed.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_matrix_exp.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_matrix_exp.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_vector_fixed_ref.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_adaptsimpson_integral.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_adaptsimpson_integral.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_adjugate+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_adjugate+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_adjugate+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_adjugate+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_adjugate+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_adjugate+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/vnl_rnpoly_solve.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_rnpoly_solve.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_chi_squared+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_chi_squared+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_adjugate+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_adjugate+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_chi_squared+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_vector_fixed_ref.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_vector_fixed_ref.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_matrix_fixed_ref.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_chi_squared+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_chi_squared+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+double.double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_chi_squared+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_chi_squared+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+float.float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_chi_squared+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_chi_squared+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+int.double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_matrix_fixed_ref.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_matrix_fixed_ref.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_numeric_traits.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+double.double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_convolve+double.double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+int.float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+int.double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_convolve+int.double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+int.int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_matrix_fixed.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_matrix_fixed.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_power.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+float.float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_convolve+float.float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_numeric_traits.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_numeric_traits.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_quaternion.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_determinant+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+int.int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_convolve+int.int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+int-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+int.float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_convolve+int.float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+int-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_determinant+int-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_quaternion.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_quaternion.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_determinant+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 30%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_rational.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_1d+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_power.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_power.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_polynomial.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_determinant+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_1d+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_1d+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_fft_1d+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_2d+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_determinant+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_2d+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_1d+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_fft_1d+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_base+1.double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_2d+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_fft_2d+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_base+1.float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_2d+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_fft_2d+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_base+2.double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_base+1.double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_fft_base+1.double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_base+2.float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_base+1.float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_fft_base+1.float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_prime_factors+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_base+2.double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_fft_base+2.double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_prime_factors+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_prime_factors+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_fft_prime_factors+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_matrix_inverse+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_prime_factors+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_fft_prime_factors+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_matrix_inverse+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_base+2.float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_fft_base+2.float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_orthogonal_complement+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_rational.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_rational.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_real_polynomial.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_matrix_inverse+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_matrix_inverse+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_orthogonal_complement+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_matrix_inverse+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_matrix_inverse+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_orthogonal_complement+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_orthogonal_complement+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_orthogonal_complement+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_orthogonal_complement+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_orthogonal_complement+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_orthogonal_complement+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_orthogonal_complement+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_orthogonal_complement+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_qr+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_qr+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_real_polynomial.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_real_polynomial.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_real_npolynomial.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_orthogonal_complement+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_orthogonal_complement+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_qr+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_real_npolynomial.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_real_npolynomial.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_resize.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_qr+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_qr+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_qr+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_qr+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_qr+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_scatter_3x3+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_qr+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_qr+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_scatter_3x3+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_resize.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_resize.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_rotation_matrix.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_scatter_3x3+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_scatter_3x3+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_polynomial.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_polynomial.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_sym_matrix.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_scatter_3x3+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_scatter_3x3+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_rotation_matrix.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_rotation_matrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_transpose.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_qr+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_qr+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_sym_matrix.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_sym_matrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_fastops.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_transpose.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_transpose.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_vector.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_svd+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_svd+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_economy+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_svd+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_economy+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_fastops.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_fastops.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_gamma.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_economy+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_svd_economy+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_economy+vcl_complex+double--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_svd+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_economy+vcl_complex+float--.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_economy+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_svd_economy+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_fixed+double.3.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_gamma.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_gamma.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_random.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_vector.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_vector.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_alignment.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_economy+vcl_complex+double--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_svd_economy+vcl_complex+double--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_fixed+double.3.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_economy+vcl_complex+float--.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_svd_economy+vcl_complex+float--.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_fixed+float.3.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_random.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_random.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_arithmetic.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_finite.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_finite.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_hungarian_algorithm.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_fixed+double.3.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_svd_fixed+double.3.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_fixed+float.3.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_alignment.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_alignment.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_integrant.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_arithmetic.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_arithmetic.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_bessel.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_fixed+double.3.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_svd_fixed+double.3.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_symmetric_eigensystem+double-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_fixed+float.3.3-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_svd_fixed+float.3.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/CMakeFiles/itkvnl_algo.dir/Templates/vnl_symmetric_eigensystem+float-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_integrant.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_integrant.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_crs_index.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_fixed+float.3.4-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_svd_fixed+float.3.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_sparse_lst_sqr_function.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_bessel.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_bessel.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_sparse_matrix.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_hungarian_algorithm.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_hungarian_algorithm.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_pow_log.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_symmetric_eigensystem+double-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_symmetric_eigensystem+double-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/CMakeFiles/vnl_test_all.dir/test_vnl_index_sort.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -Ditkvnl_algo_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/itkvnl_algo.dir/Templates/vnl_symmetric_eigensystem+float-.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/Templates/vnl_symmetric_eigensystem+float-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Linking CXX shared library ../../../../../../../../lib/libitkvnl_algo-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_pow_log.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_pow_log.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_crs_index.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_crs_index.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkvnl_algo.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libitkvnl_algo-4.12.so.1 -o ../../../../../../../../lib/libitkvnl_algo-4.12.so.1 CMakeFiles/itkvnl_algo.dir/vnl_cholesky.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_ldl_cholesky.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_sparse_lu.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_real_eigensystem.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_complex_eigensystem.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_generalized_eigensystem.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_sparse_symmetric_eigensystem.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_generalized_schur.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_complex_generalized_schur.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_discrete_diff.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_levenberg_marquardt.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_sparse_lm.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_conjugate_gradient.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_lbfgs.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_lbfgsb.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_amoeba.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_powell.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_brent.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_lsqr.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_solve_qp.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_bracket_minimum.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_brent_minimizer.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_rpoly_roots.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_cpoly_roots.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_rnpoly_solve.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_fft.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_determinant.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_gaussian_kernel_1d.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_simpson_integral.cxx.o CMakeFiles/itkvnl_algo.dir/vnl_adaptsimpson_integral.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_adjugate+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_adjugate+float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_adjugate+int-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_chi_squared+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_chi_squared+float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_chi_squared+int-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+double.double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+float.float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+int.double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+int.float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_convolve+int.int-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+int-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+vcl_complex+double--.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_determinant+vcl_complex+float--.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_1d+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_1d+float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_2d+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_2d+float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_base+1.double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_base+1.float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_base+2.double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_base+2.float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_prime_factors+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_fft_prime_factors+float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_matrix_inverse+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_matrix_inverse+float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_orthogonal_complement+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_orthogonal_complement+float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_orthogonal_complement+vcl_complex+double--.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_orthogonal_complement+vcl_complex+float--.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_qr+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_qr+float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_qr+vcl_complex+double--.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_qr+vcl_complex+float--.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_scatter_3x3+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_scatter_3x3+float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd+float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd+vcl_complex+double--.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd+vcl_complex+float--.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_economy+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_economy+float-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_economy+vcl_complex+double--.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_economy+vcl_complex+float--.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_fixed+double.3.3-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_fixed+double.3.4-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_fixed+float.3.3-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_svd_fixed+float.3.4-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_symmetric_eigensystem+double-.cxx.o CMakeFiles/itkvnl_algo.dir/Templates/vnl_symmetric_eigensystem+float-.cxx.o ../../../../../../../../lib/libitknetlib-4.12.so.1 ../../../../../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../../../../../lib/libitkvnl-4.12.so.1 ../../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo && /usr/bin/cmake -E cmake_symlink_library ../../../../../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../../../../../lib/libitkvnl_algo-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 31%] Built target itkvnl_algo make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_include.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_include.dir/depend make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/depend make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_template_include.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_template_include.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_include.dir/DependInfo.cmake --color= Scanning dependencies of target vnl_algo_test_include make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_include.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_include.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_template_include.dir/DependInfo.cmake --color= Scanning dependencies of target vnl_algo_test_template_include make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_template_include.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_template_include.dir/build make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_include.dir/test_include.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/DependInfo.cmake --color= Scanning dependencies of target vnl_algo_test_all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/build.make Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/build make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_template_include.dir/test_template_include.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_driver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_vnl_index_sort.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_vnl_index_sort.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_driver.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_driver.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_util.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_algo.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_sparse_matrix.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_sparse_matrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_amoeba.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_test_all.dir/test_sparse_lst_sqr_function.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests/test_sparse_lst_sqr_function.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Linking CXX executable ../../../../../../../../bin/vnl_test_all make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_include.dir/test_include.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_include.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Linking CXX executable ../../../../../../../../../bin/vnl_algo_test_include make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/vnl_test_all.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/vnl_test_all.dir/test_driver.cxx.o CMakeFiles/vnl_test_all.dir/test_bignum.cxx.o CMakeFiles/vnl_test_all.dir/test_decnum.cxx.o CMakeFiles/vnl_test_all.dir/test_complex.cxx.o CMakeFiles/vnl_test_all.dir/test_complexify.cxx.o CMakeFiles/vnl_test_all.dir/test_inverse.cxx.o CMakeFiles/vnl_test_all.dir/test_diag_matrix.cxx.o CMakeFiles/vnl_test_all.dir/test_diag_matrix_fixed.cxx.o CMakeFiles/vnl_test_all.dir/test_file_matrix.cxx.o CMakeFiles/vnl_test_all.dir/test_finite.cxx.o CMakeFiles/vnl_test_all.dir/test_math.cxx.o CMakeFiles/vnl_test_all.dir/test_na.cxx.o CMakeFiles/vnl_test_all.dir/test_matrix.cxx.o CMakeFiles/vnl_test_all.dir/test_container_interface.cxx.o CMakeFiles/vnl_test_all.dir/test_matrix_exp.cxx.o CMakeFiles/vnl_test_all.dir/test_matrix_fixed.cxx.o CMakeFiles/vnl_test_all.dir/test_vector_fixed_ref.cxx.o CMakeFiles/vnl_test_all.dir/test_matrix_fixed_ref.cxx.o CMakeFiles/vnl_test_all.dir/test_numeric_traits.cxx.o CMakeFiles/vnl_test_all.dir/test_power.cxx.o CMakeFiles/vnl_test_all.dir/test_quaternion.cxx.o CMakeFiles/vnl_test_all.dir/test_rational.cxx.o CMakeFiles/vnl_test_all.dir/test_polynomial.cxx.o CMakeFiles/vnl_test_all.dir/test_real_polynomial.cxx.o CMakeFiles/vnl_test_all.dir/test_real_npolynomial.cxx.o CMakeFiles/vnl_test_all.dir/test_resize.cxx.o CMakeFiles/vnl_test_all.dir/test_rotation_matrix.cxx.o CMakeFiles/vnl_test_all.dir/test_sym_matrix.cxx.o CMakeFiles/vnl_test_all.dir/test_transpose.cxx.o CMakeFiles/vnl_test_all.dir/test_fastops.cxx.o CMakeFiles/vnl_test_all.dir/test_vector.cxx.o CMakeFiles/vnl_test_all.dir/test_gamma.cxx.o CMakeFiles/vnl_test_all.dir/test_random.cxx.o CMakeFiles/vnl_test_all.dir/test_alignment.cxx.o CMakeFiles/vnl_test_all.dir/test_arithmetic.cxx.o CMakeFiles/vnl_test_all.dir/test_hungarian_algorithm.cxx.o CMakeFiles/vnl_test_all.dir/test_integrant.cxx.o CMakeFiles/vnl_test_all.dir/test_bessel.cxx.o CMakeFiles/vnl_test_all.dir/test_crs_index.cxx.o CMakeFiles/vnl_test_all.dir/test_sparse_lst_sqr_function.cxx.o CMakeFiles/vnl_test_all.dir/test_sparse_matrix.cxx.o CMakeFiles/vnl_test_all.dir/test_pow_log.cxx.o CMakeFiles/vnl_test_all.dir/test_vnl_index_sort.cxx.o -o ../../../../../../../../bin/vnl_test_all ../../../../../../../../lib/libitkvnl-4.12.so.1 ../../../../../../../../lib/libitktestlib-4.12.so.1 ../../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_template_include.dir/test_template_include.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_template_include.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 31%] Built target vnl_test_all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/build.make Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/depend make[3]: Entering directory '/<>/BUILD' [ 31%] Linking CXX executable ../../../../../../../../../bin/vnl_algo_test_template_include make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNLInstantiation/src /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVNLInstantiation make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/build.make Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/build make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+ulonglong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/vnl_algo_test_include.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/vnl_algo_test_include.dir/test_include.cxx.o -o ../../../../../../../../../bin/vnl_algo_test_include ../../../../../../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../../../../../../lib/libitknetlib-4.12.so.1 ../../../../../../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../../../../../../lib/libitkvnl-4.12.so.1 ../../../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 31%] Built target vnl_algo_test_include make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_fft_base+float.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+ulonglong-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_vector+ulonglong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/vnl_algo_test_template_include.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/vnl_algo_test_template_include.dir/test_template_include.cxx.o -o ../../../../../../../../../bin/vnl_algo_test_template_include ../../../../../../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../../../../../../lib/libitknetlib-4.12.so.1 ../../../../../../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../../../../../../lib/libitkvnl-4.12.so.1 ../../../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_fft_base+float.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_util.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_util.cxx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 31%] Built target vnl_algo_test_template_include make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_cholesky.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_complex_algo.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_amoeba.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_amoeba.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_complex_eigensystem.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_fft_base+float.4-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_fft_base+float.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_fft_base+float.3-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_fft_base+float.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.2.2-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.2.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_algo.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_algo.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_convolve.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_complex_algo.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_complex_algo.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_cpoly_roots.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_complex_eigensystem.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_complex_eigensystem.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_determinant.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_cholesky.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_cholesky.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_fft.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.2.2-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_matrix_fixed_ref+double.2.2-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_cpoly_roots.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_cpoly_roots.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_fft_base+double.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_fft1d.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.2.3-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_matrix_fixed_ref+double.2.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_fft_base+double.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_convolve.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_convolve.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_fft2d.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_fft.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_fft.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_functions.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_determinant.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_determinant.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_generalized_eigensystem.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_fft_base+double.4-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_fft_base+double.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_fft_base+double.3-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_fft_base+double.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+ushort-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+ushort-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_fft1d.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_fft1d.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_fft2d.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_fft2d.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_levenberg_marquardt.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_ldl_cholesky.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_generalized_eigensystem.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_generalized_eigensystem.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_matrix_update.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_functions.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_functions.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_minimizers.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_minimizers.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_minimizers.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_powell.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_matrix_update.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_matrix_update.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_qr.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_levenberg_marquardt.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_levenberg_marquardt.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_qsvd.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_ldl_cholesky.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_ldl_cholesky.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_rank.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+ushort-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_c_vector+ushort-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed+double.3.12-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+ushort-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_vector+ushort-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+char-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_powell.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_powell.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_real_eigensystem.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_qr.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_qr.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_rnpoly_roots.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_qsvd.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_qsvd.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_rpoly_roots.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_rank.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_rank.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_sparse_matrix.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_rpoly_roots.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_rpoly_roots.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_svd.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_real_eigensystem.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_real_eigensystem.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_svd_fixed.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+char-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_c_vector+char-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+short-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed+double.3.12-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_matrix_fixed+double.3.12-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+short-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_sparse_matrix.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_sparse_matrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_symmetric_eigensystem.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_rnpoly_roots.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_rnpoly_roots.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_integral.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_svd_fixed.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_svd_fixed.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_solve_qp.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+short-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_c_vector+short-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.3.12-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_svd.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_svd.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_sparse_lu.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_solve_qp.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_solve_qp.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_bracket_minimum.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_integral.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_integral.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_brent_minimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_symmetric_eigensystem.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_symmetric_eigensystem.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/CMakeFiles/vnl_algo_test_all.dir/test_sparse_lm.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_bracket_minimum.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_bracket_minimum.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.4.4-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_brent_minimizer.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_brent_minimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+char-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_sparse_lu.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_sparse_lu.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 31%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+char-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.3.12-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_matrix_fixed_ref+double.3.12-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+longlong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+longlong-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_matrix+longlong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+ulonglong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+ulonglong-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_c_vector+ulonglong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.4.3-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+short-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_matrix+short-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+longlong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+longlong-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_vector+longlong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+ulonglong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+ulonglong-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_matrix+ulonglong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+longlong-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+longlong-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_c_vector+longlong-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+short-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.4.4-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_matrix_fixed_ref+double.4.4-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/ThirdParty/VNLInstantiation/src/CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+ushort-.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/c++ -DVXL_LEGACY_ERROR_REPORTING -DVXL_WARN_DEPRECATED -DVXL_WARN_DEPRECATED_ONCE -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib/linalg -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -I/<>/Modules/ThirdParty/VNL/src/vxl/core/testlib -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIE -o CMakeFiles/vnl_algo_test_all.dir/test_sparse_lm.cxx.o -c /<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests/test_sparse_lm.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Linking CXX executable ../../../../../../../../../bin/vnl_algo_test_all make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/vnl_algo_test_all.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/vnl_algo_test_all.dir/test_driver.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_util.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_algo.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_amoeba.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_cholesky.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_complex_algo.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_complex_eigensystem.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_convolve.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_cpoly_roots.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_determinant.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_fft.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_fft1d.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_fft2d.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_functions.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_generalized_eigensystem.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_ldl_cholesky.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_levenberg_marquardt.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_matrix_update.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_minimizers.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_powell.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_qr.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_qsvd.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_rank.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_real_eigensystem.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_rnpoly_roots.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_rpoly_roots.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_sparse_matrix.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_svd.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_svd_fixed.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_symmetric_eigensystem.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_integral.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_solve_qp.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_sparse_lu.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_bracket_minimum.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_brent_minimizer.cxx.o CMakeFiles/vnl_algo_test_all.dir/test_sparse_lm.cxx.o -o ../../../../../../../../../bin/vnl_algo_test_all ../../../../../../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../../../../../../lib/libitktestlib-4.12.so.1 ../../../../../../../../../lib/libitknetlib-4.12.so.1 ../../../../../../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../../../../../../lib/libitkvnl-4.12.so.1 ../../../../../../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 32%] Built target vnl_algo_test_all make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/CMakeFiles/ITKVNL-all.dir/build.make Modules/ThirdParty/VNL/CMakeFiles/ITKVNL-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNL /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNL /<>/BUILD/Modules/ThirdParty/VNL/CMakeFiles/ITKVNL-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVNL-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNL/CMakeFiles/ITKVNL-all.dir/build.make Modules/ThirdParty/VNL/CMakeFiles/ITKVNL-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/VNL/CMakeFiles/ITKVNL-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 32%] Built target ITKVNL-all make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+char-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_vector+char-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.4.3-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_matrix_fixed_ref+double.4.3-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+char-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_matrix+char-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+short-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_vector+short-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/c++ -DITKVNLInstantiation_EXPORTS -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -fPIC -o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+ushort-.cxx.o -c /<>/Modules/ThirdParty/VNLInstantiation/src/vnl_matrix+ushort-.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Linking CXX shared library ../../../../lib/libITKVNLInstantiation-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVNLInstantiation.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -w -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKVNLInstantiation-4.12.so.1 -o ../../../../lib/libITKVNLInstantiation-4.12.so.1 CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+ulonglong-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_fft_base+float.3-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_fft_base+float.4-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.2.2-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.2.3-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_fft_base+double.3-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_fft_base+double.4-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+ushort-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+ushort-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed+double.3.12-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+char-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+short-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+short-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.3.12-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.4.4-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+char-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+char-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+longlong-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+ulonglong-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix_fixed_ref+double.4.3-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+longlong-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+ulonglong-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_c_vector+longlong-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_vector+short-.cxx.o CMakeFiles/ITKVNLInstantiation.dir/vnl_matrix+ushort-.cxx.o ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/ThirdParty/VNLInstantiation/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 32%] Built target ITKVNLInstantiation make[2]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNLInstantiation/CMakeFiles/ITKVNLInstantiation-all.dir/build.make Modules/ThirdParty/VNLInstantiation/CMakeFiles/ITKVNLInstantiation-all.dir/depend make -f Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/build.make Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/ThirdParty/VNLInstantiation /<>/BUILD /<>/BUILD/Modules/ThirdParty/VNLInstantiation /<>/BUILD/Modules/ThirdParty/VNLInstantiation/CMakeFiles/ITKVNLInstantiation-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVNLInstantiation-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/ThirdParty/VNLInstantiation/CMakeFiles/ITKVNLInstantiation-all.dir/build.make Modules/ThirdParty/VNLInstantiation/CMakeFiles/ITKVNLInstantiation-all.dir/build make[3]: Nothing to be done for 'Modules/ThirdParty/VNLInstantiation/CMakeFiles/ITKVNLInstantiation-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 32%] Built target ITKVNLInstantiation-all make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/src /<>/BUILD /<>/BUILD/Modules/Core/Common/src /<>/BUILD/Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommon make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/build.make Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/build make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkMemoryProbesCollectorBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkCreateObjectFunction.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkLogger.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkLogOutput.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkLoggerOutput.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkProgressAccumulator.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkCreateObjectFunction.cxx.o -c /<>/Modules/Core/Common/src/itkCreateObjectFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkNumericTraits.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkLoggerOutput.cxx.o -c /<>/Modules/Core/Common/src/itkLoggerOutput.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkLogOutput.cxx.o -c /<>/Modules/Core/Common/src/itkLogOutput.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkMutexLock.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkLogger.cxx.o -c /<>/Modules/Core/Common/src/itkLogger.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkHexahedronCellTopology.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkIndent.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkProgressAccumulator.cxx.o -c /<>/Modules/Core/Common/src/itkProgressAccumulator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkEventObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkHexahedronCellTopology.cxx.o -c /<>/Modules/Core/Common/src/itkHexahedronCellTopology.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkFileOutputWindow.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkNumericTraits.cxx.o -c /<>/Modules/Core/Common/src/itkNumericTraits.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkSimpleFilterWatcher.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkMemoryProbesCollectorBase.cxx.o -c /<>/Modules/Core/Common/src/itkMemoryProbesCollectorBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkNumericTraitsVectorPixel.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkIndent.cxx.o -c /<>/Modules/Core/Common/src/itkIndent.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkMutexLock.cxx.o -c /<>/Modules/Core/Common/src/itkMutexLock.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkQuadrilateralCellTopology.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkEventObject.cxx.o -c /<>/Modules/Core/Common/src/itkEventObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkIterationReporter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkQuadrilateralCellTopology.cxx.o -c /<>/Modules/Core/Common/src/itkQuadrilateralCellTopology.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkMemoryProbe.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkFileOutputWindow.cxx.o -c /<>/Modules/Core/Common/src/itkFileOutputWindow.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkTextOutput.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkIterationReporter.cxx.o -c /<>/Modules/Core/Common/src/itkIterationReporter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkNumericTraitsTensorPixel2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkObject.cxx.o -c /<>/Modules/Core/Common/src/itkObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkNumericTraitsFixedArrayPixel2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkSimpleFilterWatcher.cxx.o -c /<>/Modules/Core/Common/src/itkSimpleFilterWatcher.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkConditionVariable.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkTextOutput.cxx.o -c /<>/Modules/Core/Common/src/itkTextOutput.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkProcessObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkNumericTraitsFixedArrayPixel2.cxx.o -c /<>/Modules/Core/Common/src/itkNumericTraitsFixedArrayPixel2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkConditionVariable.cxx.o -c /<>/Modules/Core/Common/src/itkConditionVariable.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkSpatialOrientationAdapter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkBarrier.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkNumericTraitsVectorPixel.cxx.o -c /<>/Modules/Core/Common/src/itkNumericTraitsVectorPixel.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 32%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkRealTimeInterval.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkRealTimeInterval.cxx.o -c /<>/Modules/Core/Common/src/itkRealTimeInterval.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkBarrier.cxx.o -c /<>/Modules/Core/Common/src/itkBarrier.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkOctreeNode.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkNumericTraitsFixedArrayPixel.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkNumericTraitsTensorPixel2.cxx.o -c /<>/Modules/Core/Common/src/itkNumericTraitsTensorPixel2.cxx In file included from /<>/Modules/Core/Common/src/itkNumericTraitsTensorPixel2.cxx:18: In file included from /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:22: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkMemoryProbe.cxx.o -c /<>/Modules/Core/Common/src/itkMemoryProbe.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkMetaDataObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkMultiThreader.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkSpatialOrientationAdapter.cxx.o -c /<>/Modules/Core/Common/src/itkSpatialOrientationAdapter.cxx In file included from /<>/Modules/Core/Common/src/itkSpatialOrientationAdapter.cxx:28: In file included from /<>/Modules/Core/Common/include/itkSpatialOrientationAdapter.h:30: In file included from /<>/Modules/Core/Common/include/itkOrientationAdapterBase.h:30: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkMetaDataDictionary.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkNumericTraitsFixedArrayPixel.cxx.o -c /<>/Modules/Core/Common/src/itkNumericTraitsFixedArrayPixel.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkDataObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkOctreeNode.cxx.o -c /<>/Modules/Core/Common/src/itkOctreeNode.cxx In file included from /<>/Modules/Core/Common/src/itkOctreeNode.cxx:19: In file included from /<>/Modules/Core/Common/include/itkOctree.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkThreadLogger.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkMetaDataDictionary.cxx.o -c /<>/Modules/Core/Common/src/itkMetaDataDictionary.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkNumericTraitsTensorPixel.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkMultiThreader.cxx.o -c /<>/Modules/Core/Common/src/itkMultiThreader.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkCommand.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkProcessObject.cxx.o -c /<>/Modules/Core/Common/src/itkProcessObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkNumericTraitsPointPixel.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkMetaDataObject.cxx.o -c /<>/Modules/Core/Common/src/itkMetaDataObject.cxx In file included from /<>/Modules/Core/Common/src/itkMetaDataObject.cxx:19: In file included from /<>/Modules/Core/Common/include/itkMetaDataObject.h:34: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkLightObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkDataObject.cxx.o -c /<>/Modules/Core/Common/src/itkDataObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkStdStreamLogOutput.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkCommand.cxx.o -c /<>/Modules/Core/Common/src/itkCommand.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkLightProcessObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkThreadLogger.cxx.o -c /<>/Modules/Core/Common/src/itkThreadLogger.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkRegion.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkLightObject.cxx.o -c /<>/Modules/Core/Common/src/itkLightObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkImageIORegion.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkStdStreamLogOutput.cxx.o -c /<>/Modules/Core/Common/src/itkStdStreamLogOutput.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkImageSourceCommon.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkNumericTraitsTensorPixel.cxx.o -c /<>/Modules/Core/Common/src/itkNumericTraitsTensorPixel.cxx In file included from /<>/Modules/Core/Common/src/itkNumericTraitsTensorPixel.cxx:18: In file included from /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:22: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkImageToImageFilterCommon.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkLightProcessObject.cxx.o -c /<>/Modules/Core/Common/src/itkLightProcessObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkImageRegionSplitterBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkRegion.cxx.o -c /<>/Modules/Core/Common/src/itkRegion.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkImageRegionSplitterSlowDimension.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkNumericTraitsPointPixel.cxx.o -c /<>/Modules/Core/Common/src/itkNumericTraitsPointPixel.cxx In file included from /<>/Modules/Core/Common/src/itkNumericTraitsPointPixel.cxx:18: In file included from /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkImageRegionSplitterDirection.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkImageSourceCommon.cxx.o -c /<>/Modules/Core/Common/src/itkImageSourceCommon.cxx In file included from /<>/Modules/Core/Common/src/itkImageSourceCommon.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterSlowDimension.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkImageRegionSplitterMultidimensional.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkImageRegionSplitterBase.cxx.o -c /<>/Modules/Core/Common/src/itkImageRegionSplitterBase.cxx In file included from /<>/Modules/Core/Common/src/itkImageRegionSplitterBase.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkFastMutexLock.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkImageIORegion.cxx.o -c /<>/Modules/Core/Common/src/itkImageIORegion.cxx In file included from /<>/Modules/Core/Common/src/itkImageIORegion.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkVersion.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkImageToImageFilterCommon.cxx.o -c /<>/Modules/Core/Common/src/itkImageToImageFilterCommon.cxx In file included from /<>/Modules/Core/Common/src/itkImageToImageFilterCommon.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkNumericTraitsRGBAPixel.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkImageRegionSplitterSlowDimension.cxx.o -c /<>/Modules/Core/Common/src/itkImageRegionSplitterSlowDimension.cxx In file included from /<>/Modules/Core/Common/src/itkImageRegionSplitterSlowDimension.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterSlowDimension.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkRealTimeClock.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkFastMutexLock.cxx.o -c /<>/Modules/Core/Common/src/itkFastMutexLock.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkMetaDataObjectBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkImageRegionSplitterDirection.cxx.o -c /<>/Modules/Core/Common/src/itkImageRegionSplitterDirection.cxx In file included from /<>/Modules/Core/Common/src/itkImageRegionSplitterDirection.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterDirection.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkCovariantVector.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkImageRegionSplitterMultidimensional.cxx.o -c /<>/Modules/Core/Common/src/itkImageRegionSplitterMultidimensional.cxx In file included from /<>/Modules/Core/Common/src/itkImageRegionSplitterMultidimensional.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterMultidimensional.h:23: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkMemoryUsageObserver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkNumericTraitsRGBAPixel.cxx.o -c /<>/Modules/Core/Common/src/itkNumericTraitsRGBAPixel.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkMersenneTwisterRandomVariateGenerator.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkVersion.cxx.o -c /<>/Modules/Core/Common/src/itkVersion.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkLoggerBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkMetaDataObjectBase.cxx.o -c /<>/Modules/Core/Common/src/itkMetaDataObjectBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkNumericTraitsCovariantVectorPixel.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkRealTimeClock.cxx.o -c /<>/Modules/Core/Common/src/itkRealTimeClock.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkProgressReporter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkCovariantVector.cxx.o -c /<>/Modules/Core/Common/src/itkCovariantVector.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkExceptionObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkMemoryUsageObserver.cxx.o -c /<>/Modules/Core/Common/src/itkMemoryUsageObserver.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkMultipleLogOutput.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkMersenneTwisterRandomVariateGenerator.cxx.o -c /<>/Modules/Core/Common/src/itkMersenneTwisterRandomVariateGenerator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkQuadraticTriangleCellTopology.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkLoggerBase.cxx.o -c /<>/Modules/Core/Common/src/itkLoggerBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkTimeProbesCollectorBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkProgressReporter.cxx.o -c /<>/Modules/Core/Common/src/itkProgressReporter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkSmapsFileParser.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkMultipleLogOutput.cxx.o -c /<>/Modules/Core/Common/src/itkMultipleLogOutput.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkTriangleCellTopology.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkQuadraticTriangleCellTopology.cxx.o -c /<>/Modules/Core/Common/src/itkQuadraticTriangleCellTopology.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkVector.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkExceptionObject.cxx.o -c /<>/Modules/Core/Common/src/itkExceptionObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkRealTimeStamp.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkTriangleCellTopology.cxx.o -c /<>/Modules/Core/Common/src/itkTriangleCellTopology.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkDirectory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkVector.cxx.o -c /<>/Modules/Core/Common/src/itkVector.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkLoggerManager.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkRealTimeStamp.cxx.o -c /<>/Modules/Core/Common/src/itkRealTimeStamp.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkTimeProbe.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkNumericTraitsCovariantVectorPixel.cxx.o -c /<>/Modules/Core/Common/src/itkNumericTraitsCovariantVectorPixel.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkDirectory.cxx.o -c /<>/Modules/Core/Common/src/itkDirectory.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkNumericTraitsRGBPixel.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkTimeStamp.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkSmapsFileParser.cxx.o -c /<>/Modules/Core/Common/src/itkSmapsFileParser.cxx In file included from /<>/Modules/Core/Common/src/itkSmapsFileParser.cxx:18: In file included from /<>/Modules/Core/Common/include/itkSmapsFileParser.h:301: /<>/Modules/Core/Common/include/itkSmapsFileParser.hxx:192:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fgets(buf, 256, vmmapCommandOutput); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkTetrahedronCellTopology.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkTimeProbesCollectorBase.cxx.o -c /<>/Modules/Core/Common/src/itkTimeProbesCollectorBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkThreadedIndexedContainerPartitioner.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkTimeStamp.cxx.o -c /<>/Modules/Core/Common/src/itkTimeStamp.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkObjectFactoryBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkNumericTraitsRGBPixel.cxx.o -c /<>/Modules/Core/Common/src/itkNumericTraitsRGBPixel.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkFloatingPointExceptions.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkLoggerManager.cxx.o -c /<>/Modules/Core/Common/src/itkLoggerManager.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkTetrahedronCellTopology.cxx.o -c /<>/Modules/Core/Common/src/itkTetrahedronCellTopology.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkOutputWindow.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkSimpleFastMutexLock.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkSimpleFastMutexLock.cxx.o -c /<>/Modules/Core/Common/src/itkSimpleFastMutexLock.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkNumericTraitsDiffusionTensor3DPixel.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkFloatingPointExceptions.cxx.o -c /<>/Modules/Core/Common/src/itkFloatingPointExceptions.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkEquivalencyTable.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkThreadedIndexedContainerPartitioner.cxx.o -c /<>/Modules/Core/Common/src/itkThreadedIndexedContainerPartitioner.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkXMLFileOutputWindow.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkOutputWindow.cxx.o -c /<>/Modules/Core/Common/src/itkOutputWindow.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkXMLFilterWatcher.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkNumericTraitsDiffusionTensor3DPixel.cxx.o -c /<>/Modules/Core/Common/src/itkNumericTraitsDiffusionTensor3DPixel.cxx In file included from /<>/Modules/Core/Common/src/itkNumericTraitsDiffusionTensor3DPixel.cxx:18: In file included from /<>/Modules/Core/Common/include/itkNumericTraitsDiffusionTensor3DPixel.h:22: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkStoppingCriterionBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkTimeProbe.cxx.o -c /<>/Modules/Core/Common/src/itkTimeProbe.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkCompensatedSummation.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkObjectFactoryBase.cxx.o -c /<>/Modules/Core/Common/src/itkObjectFactoryBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkXMLFileOutputWindow.cxx.o -c /<>/Modules/Core/Common/src/itkXMLFileOutputWindow.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkArrayOutputSpecialization.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkNumberToString.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkEquivalencyTable.cxx.o -c /<>/Modules/Core/Common/src/itkEquivalencyTable.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkSmartPointerForwardReferenceProcessObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkStoppingCriterionBase.cxx.o -c /<>/Modules/Core/Common/src/itkStoppingCriterionBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkThreadPool.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkXMLFilterWatcher.cxx.o -c /<>/Modules/Core/Common/src/itkXMLFilterWatcher.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkRandomVariateGeneratorBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkCompensatedSummation.cxx.o -c /<>/Modules/Core/Common/src/itkCompensatedSummation.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkAtomicInt.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkNumberToString.cxx.o -c /<>/Modules/Core/Common/src/itkNumberToString.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkMath.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkArrayOutputSpecialization.cxx.o -c /<>/Modules/Core/Common/src/itkArrayOutputSpecialization.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkPThreadPool.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkSmartPointerForwardReferenceProcessObject.cxx.o -c /<>/Modules/Core/Common/src/itkSmartPointerForwardReferenceProcessObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/src/CMakeFiles/ITKCommon.dir/itkDynamicLoader.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkAtomicInt.cxx.o -c /<>/Modules/Core/Common/src/itkAtomicInt.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkRandomVariateGeneratorBase.cxx.o -c /<>/Modules/Core/Common/src/itkRandomVariateGeneratorBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkMath.cxx.o -c /<>/Modules/Core/Common/src/itkMath.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python/PyBase && /usr/bin/c++ -DITKPyBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Wrapping/Generators/Python/PyBase -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPyBasePython.dir/pyBasePython.cpp.o -c /<>/BUILD/Wrapping/Generators/Python/PyBase/pyBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX shared module ../../../../lib/_ITKPyBasePython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkThreadPool.cxx.o -c /<>/Modules/Core/Common/src/itkThreadPool.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkPThreadPool.cxx.o -c /<>/Modules/Core/Common/src/itkPThreadPool.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/c++ -DITKCommon_EXPORTS -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKCommon.dir/itkDynamicLoader.cxx.o -c /<>/Modules/Core/Common/src/itkDynamicLoader.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python/PyBase && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKPyBasePython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../../lib/_ITKPyBasePython.so CMakeFiles/ITKPyBasePython.dir/ITKPyBasePython.cpp.o CMakeFiles/ITKPyBasePython.dir/pyBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX shared library ../../../../lib/libITKCommon-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKPyBasePython make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommon.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKCommon-4.12.so.1 -o ../../../../lib/libITKCommon-4.12.so.1 CMakeFiles/ITKCommon.dir/itkMemoryProbesCollectorBase.cxx.o CMakeFiles/ITKCommon.dir/itkCreateObjectFunction.cxx.o CMakeFiles/ITKCommon.dir/itkLogger.cxx.o CMakeFiles/ITKCommon.dir/itkLogOutput.cxx.o CMakeFiles/ITKCommon.dir/itkLoggerOutput.cxx.o CMakeFiles/ITKCommon.dir/itkProgressAccumulator.cxx.o CMakeFiles/ITKCommon.dir/itkNumericTraits.cxx.o CMakeFiles/ITKCommon.dir/itkMutexLock.cxx.o CMakeFiles/ITKCommon.dir/itkHexahedronCellTopology.cxx.o CMakeFiles/ITKCommon.dir/itkIndent.cxx.o CMakeFiles/ITKCommon.dir/itkEventObject.cxx.o CMakeFiles/ITKCommon.dir/itkFileOutputWindow.cxx.o CMakeFiles/ITKCommon.dir/itkSimpleFilterWatcher.cxx.o CMakeFiles/ITKCommon.dir/itkNumericTraitsVectorPixel.cxx.o CMakeFiles/ITKCommon.dir/itkObject.cxx.o CMakeFiles/ITKCommon.dir/itkQuadrilateralCellTopology.cxx.o CMakeFiles/ITKCommon.dir/itkIterationReporter.cxx.o CMakeFiles/ITKCommon.dir/itkMemoryProbe.cxx.o CMakeFiles/ITKCommon.dir/itkTextOutput.cxx.o CMakeFiles/ITKCommon.dir/itkNumericTraitsTensorPixel2.cxx.o CMakeFiles/ITKCommon.dir/itkNumericTraitsFixedArrayPixel2.cxx.o CMakeFiles/ITKCommon.dir/itkConditionVariable.cxx.o CMakeFiles/ITKCommon.dir/itkProcessObject.cxx.o CMakeFiles/ITKCommon.dir/itkBarrier.cxx.o CMakeFiles/ITKCommon.dir/itkSpatialOrientationAdapter.cxx.o CMakeFiles/ITKCommon.dir/itkRealTimeInterval.cxx.o CMakeFiles/ITKCommon.dir/itkOctreeNode.cxx.o CMakeFiles/ITKCommon.dir/itkNumericTraitsFixedArrayPixel.cxx.o CMakeFiles/ITKCommon.dir/itkMultiThreader.cxx.o CMakeFiles/ITKCommon.dir/itkMetaDataObject.cxx.o CMakeFiles/ITKCommon.dir/itkMetaDataDictionary.cxx.o CMakeFiles/ITKCommon.dir/itkDataObject.cxx.o CMakeFiles/ITKCommon.dir/itkThreadLogger.cxx.o CMakeFiles/ITKCommon.dir/itkNumericTraitsTensorPixel.cxx.o CMakeFiles/ITKCommon.dir/itkCommand.cxx.o CMakeFiles/ITKCommon.dir/itkNumericTraitsPointPixel.cxx.o CMakeFiles/ITKCommon.dir/itkLightObject.cxx.o CMakeFiles/ITKCommon.dir/itkStdStreamLogOutput.cxx.o CMakeFiles/ITKCommon.dir/itkLightProcessObject.cxx.o CMakeFiles/ITKCommon.dir/itkRegion.cxx.o CMakeFiles/ITKCommon.dir/itkImageIORegion.cxx.o CMakeFiles/ITKCommon.dir/itkImageSourceCommon.cxx.o CMakeFiles/ITKCommon.dir/itkImageToImageFilterCommon.cxx.o CMakeFiles/ITKCommon.dir/itkImageRegionSplitterBase.cxx.o CMakeFiles/ITKCommon.dir/itkImageRegionSplitterSlowDimension.cxx.o CMakeFiles/ITKCommon.dir/itkImageRegionSplitterDirection.cxx.o CMakeFiles/ITKCommon.dir/itkImageRegionSplitterMultidimensional.cxx.o CMakeFiles/ITKCommon.dir/itkFastMutexLock.cxx.o CMakeFiles/ITKCommon.dir/itkVersion.cxx.o CMakeFiles/ITKCommon.dir/itkNumericTraitsRGBAPixel.cxx.o CMakeFiles/ITKCommon.dir/itkRealTimeClock.cxx.o CMakeFiles/ITKCommon.dir/itkMetaDataObjectBase.cxx.o CMakeFiles/ITKCommon.dir/itkCovariantVector.cxx.o CMakeFiles/ITKCommon.dir/itkMemoryUsageObserver.cxx.o CMakeFiles/ITKCommon.dir/itkMersenneTwisterRandomVariateGenerator.cxx.o CMakeFiles/ITKCommon.dir/itkLoggerBase.cxx.o CMakeFiles/ITKCommon.dir/itkNumericTraitsCovariantVectorPixel.cxx.o CMakeFiles/ITKCommon.dir/itkProgressReporter.cxx.o CMakeFiles/ITKCommon.dir/itkExceptionObject.cxx.o CMakeFiles/ITKCommon.dir/itkMultipleLogOutput.cxx.o CMakeFiles/ITKCommon.dir/itkQuadraticTriangleCellTopology.cxx.o CMakeFiles/ITKCommon.dir/itkTimeProbesCollectorBase.cxx.o CMakeFiles/ITKCommon.dir/itkSmapsFileParser.cxx.o CMakeFiles/ITKCommon.dir/itkTriangleCellTopology.cxx.o CMakeFiles/ITKCommon.dir/itkVector.cxx.o CMakeFiles/ITKCommon.dir/itkRealTimeStamp.cxx.o CMakeFiles/ITKCommon.dir/itkDirectory.cxx.o CMakeFiles/ITKCommon.dir/itkLoggerManager.cxx.o CMakeFiles/ITKCommon.dir/itkTimeProbe.cxx.o CMakeFiles/ITKCommon.dir/itkNumericTraitsRGBPixel.cxx.o CMakeFiles/ITKCommon.dir/itkTimeStamp.cxx.o CMakeFiles/ITKCommon.dir/itkTetrahedronCellTopology.cxx.o CMakeFiles/ITKCommon.dir/itkThreadedIndexedContainerPartitioner.cxx.o CMakeFiles/ITKCommon.dir/itkObjectFactoryBase.cxx.o CMakeFiles/ITKCommon.dir/itkFloatingPointExceptions.cxx.o CMakeFiles/ITKCommon.dir/itkOutputWindow.cxx.o CMakeFiles/ITKCommon.dir/itkSimpleFastMutexLock.cxx.o CMakeFiles/ITKCommon.dir/itkNumericTraitsDiffusionTensor3DPixel.cxx.o CMakeFiles/ITKCommon.dir/itkEquivalencyTable.cxx.o CMakeFiles/ITKCommon.dir/itkXMLFileOutputWindow.cxx.o CMakeFiles/ITKCommon.dir/itkXMLFilterWatcher.cxx.o CMakeFiles/ITKCommon.dir/itkStoppingCriterionBase.cxx.o CMakeFiles/ITKCommon.dir/itkCompensatedSummation.cxx.o CMakeFiles/ITKCommon.dir/itkArrayOutputSpecialization.cxx.o CMakeFiles/ITKCommon.dir/itkNumberToString.cxx.o CMakeFiles/ITKCommon.dir/itkSmartPointerForwardReferenceProcessObject.cxx.o CMakeFiles/ITKCommon.dir/itkThreadPool.cxx.o CMakeFiles/ITKCommon.dir/itkRandomVariateGeneratorBase.cxx.o CMakeFiles/ITKCommon.dir/itkAtomicInt.cxx.o CMakeFiles/ITKCommon.dir/itkMath.cxx.o CMakeFiles/ITKCommon.dir/itkPThreadPool.cxx.o CMakeFiles/ITKCommon.dir/itkDynamicLoader.cxx.o -ldouble-conversion ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 -lpthread -lm -ldl ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libITKCommon-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKCommon make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest3.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest3.dir/depend make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest4.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest4.dir/depend make[3]: Entering directory '/<>/BUILD' [ 33%] Generating test/ITKCommonHeaderTest3.cxx make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest7.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest7.dir/depend make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest1.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest1.dir/depend make -f Modules/Core/Common/test/CMakeFiles/FactoryTestLib.dir/build.make Modules/Core/Common/test/CMakeFiles/FactoryTestLib.dir/depend make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest5.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest5.dir/depend make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest8.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest8.dir/depend make[3]: Entering directory '/<>/BUILD' [ 33%] Generating test/ITKCommonHeaderTest5.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Generating test/ITKCommonHeaderTest4.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Generating test/ITKCommonHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKCommon /<>/Modules/Core/Common /<>/BUILD/Modules/Core/Common 35 3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Generating test/ITKCommonHeaderTest8.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Generating test/ITKCommonHeaderTest7.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKCommon /<>/Modules/Core/Common /<>/BUILD/Modules/Core/Common 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKCommon /<>/Modules/Core/Common /<>/BUILD/Modules/Core/Common 35 5 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKCommon /<>/Modules/Core/Common /<>/BUILD/Modules/Core/Common 35 8 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKCommon /<>/Modules/Core/Common /<>/BUILD/Modules/Core/Common 35 4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKCommon /<>/Modules/Core/Common /<>/BUILD/Modules/Core/Common 35 7 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/test /<>/BUILD /<>/BUILD/Modules/Core/Common/test /<>/BUILD/Modules/Core/Common/test/CMakeFiles/FactoryTestLib.dir/DependInfo.cmake --color= Scanning dependencies of target FactoryTestLib make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/FactoryTestLib.dir/build.make Modules/Core/Common/test/CMakeFiles/FactoryTestLib.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common /<>/BUILD /<>/BUILD/Modules/Core/Common /<>/BUILD/Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest3.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonHeaderTest3 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest3.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest3.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common /<>/BUILD /<>/BUILD/Modules/Core/Common /<>/BUILD/Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest5.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonHeaderTest5 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest5.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest5.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common /<>/BUILD /<>/BUILD/Modules/Core/Common /<>/BUILD/Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest1.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common /<>/BUILD /<>/BUILD/Modules/Core/Common /<>/BUILD/Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest8.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonHeaderTest8 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest8.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest8.dir/build make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest3.dir/test/ITKCommonHeaderTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/test/CMakeFiles/FactoryTestLib.dir/itkFactoryTestLib.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest5.dir/test/ITKCommonHeaderTest5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common /<>/BUILD /<>/BUILD/Modules/Core/Common /<>/BUILD/Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest7.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonHeaderTest7 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest7.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest7.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common /<>/BUILD /<>/BUILD/Modules/Core/Common /<>/BUILD/Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest4.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonHeaderTest4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest1.dir/test/ITKCommonHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest4.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest4.dir/build make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest8.dir/test/ITKCommonHeaderTest8.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest7.dir/test/ITKCommonHeaderTest7.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest4.dir/test/ITKCommonHeaderTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/c++ -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommonHeaderTest7.dir/test/ITKCommonHeaderTest7.cxx.o -c /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest7.cxx In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest7.cxx:26: In file included from /<>/Modules/Core/Common/include/itkImageScanlineIterator.hxx:21: In file included from /<>/Modules/Core/Common/include/itkImageScanlineIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageScanlineConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/c++ -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommonHeaderTest5.dir/test/ITKCommonHeaderTest5.cxx.o -c /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest5.cxx In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest5.cxx:26: In file included from /<>/Modules/Core/Common/include/itkDefaultConvertPixelTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX executable ../../../bin/ITKCommonHeaderTest7 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX executable ../../../bin/ITKCommonHeaderTest5 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/c++ -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommonHeaderTest8.dir/test/ITKCommonHeaderTest8.cxx.o -c /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest8.cxx In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest8.cxx:23: In file included from /<>/Modules/Core/Common/include/itkImageRandomNonRepeatingIteratorWithIndex.hxx:21: In file included from /<>/Modules/Core/Common/include/itkImageRandomNonRepeatingIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRandomNonRepeatingConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest8.cxx:54: /<>/Modules/Core/Common/include/itkSmapsFileParser.hxx:192:9: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result] fgets(buf, 256, vmmapCommandOutput); ^~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommonHeaderTest5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCommonHeaderTest5.dir/test/ITKCommonHeaderTest5.cxx.o -o ../../../bin/ITKCommonHeaderTest5 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommonHeaderTest7.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCommonHeaderTest7.dir/test/ITKCommonHeaderTest7.cxx.o -o ../../../bin/ITKCommonHeaderTest7 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX executable ../../../bin/ITKCommonHeaderTest8 make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKCommonHeaderTest7 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest2.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest2.dir/depend make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKCommonHeaderTest5 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest9.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest9.dir/depend make[3]: Entering directory '/<>/BUILD' [ 33%] Generating test/ITKCommonHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Generating test/ITKCommonHeaderTest9.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKCommon /<>/Modules/Core/Common /<>/BUILD/Modules/Core/Common 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKCommon /<>/Modules/Core/Common /<>/BUILD/Modules/Core/Common 35 9 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common /<>/BUILD /<>/BUILD/Modules/Core/Common /<>/BUILD/Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest9.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonHeaderTest9 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest9.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest9.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/c++ -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommonHeaderTest3.dir/test/ITKCommonHeaderTest3.cxx.o -c /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest3.cxx In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest3.cxx:25: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.hxx:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common /<>/BUILD /<>/BUILD/Modules/Core/Common /<>/BUILD/Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest2.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest9.dir/test/ITKCommonHeaderTest9.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX executable ../../../bin/ITKCommonHeaderTest3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest2.dir/test/ITKCommonHeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommonHeaderTest8.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCommonHeaderTest8.dir/test/ITKCommonHeaderTest8.cxx.o -o ../../../bin/ITKCommonHeaderTest8 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKCommonHeaderTest8 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest6.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest6.dir/depend make[3]: Entering directory '/<>/BUILD' [ 33%] Generating test/ITKCommonHeaderTest6.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKCommon /<>/Modules/Core/Common /<>/BUILD/Modules/Core/Common 35 6 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common /<>/BUILD /<>/BUILD/Modules/Core/Common /<>/BUILD/Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest6.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonHeaderTest6 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest6.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest6.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/c++ -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommonHeaderTest4.dir/test/ITKCommonHeaderTest4.cxx.o -c /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest4.cxx In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest4.cxx:23: In file included from /<>/Modules/Core/Common/include/itkConstantBoundaryCondition.hxx:21: In file included from /<>/Modules/Core/Common/include/itkConstantBoundaryCondition.h:22: In file included from /<>/Modules/Core/Common/include/itkImageBoundaryCondition.h:23: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest6.dir/test/ITKCommonHeaderTest6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX executable ../../../bin/ITKCommonHeaderTest4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommonHeaderTest3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCommonHeaderTest3.dir/test/ITKCommonHeaderTest3.cxx.o -o ../../../bin/ITKCommonHeaderTest3 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKCommonHeaderTest3 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest10.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest10.dir/depend make[3]: Entering directory '/<>/BUILD' [ 33%] Generating test/ITKCommonHeaderTest10.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKCommon /<>/Modules/Core/Common /<>/BUILD/Modules/Core/Common 35 10 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/c++ -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommonHeaderTest1.dir/test/ITKCommonHeaderTest1.cxx.o -c /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest1.cxx In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest1.cxx:24: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.hxx:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common /<>/BUILD /<>/BUILD/Modules/Core/Common /<>/BUILD/Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest10.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonHeaderTest10 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest10.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest10.dir/build make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX executable ../../../bin/ITKCommonHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/CMakeFiles/ITKCommonHeaderTest10.dir/test/ITKCommonHeaderTest10.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommonHeaderTest4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCommonHeaderTest4.dir/test/ITKCommonHeaderTest4.cxx.o -o ../../../bin/ITKCommonHeaderTest4 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKCommonHeaderTest4 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/itkSystemInformation.dir/build.make Modules/Core/Common/test/CMakeFiles/itkSystemInformation.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/test /<>/BUILD /<>/BUILD/Modules/Core/Common/test /<>/BUILD/Modules/Core/Common/test/CMakeFiles/itkSystemInformation.dir/DependInfo.cmake --color= Scanning dependencies of target itkSystemInformation make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/itkSystemInformation.dir/build.make Modules/Core/Common/test/CMakeFiles/itkSystemInformation.dir/build make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/test/CMakeFiles/itkSystemInformation.dir/itkSystemInformation.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommonHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCommonHeaderTest1.dir/test/ITKCommonHeaderTest1.cxx.o -o ../../../bin/ITKCommonHeaderTest1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKCommonHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/itkMathTest.dir/build.make Modules/Core/Common/test/CMakeFiles/itkMathTest.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/test /<>/BUILD /<>/BUILD/Modules/Core/Common/test /<>/BUILD/Modules/Core/Common/test/CMakeFiles/itkMathTest.dir/DependInfo.cmake --color= Scanning dependencies of target itkMathTest make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/itkMathTest.dir/build.make Modules/Core/Common/test/CMakeFiles/itkMathTest.dir/build make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/test/CMakeFiles/itkMathTest.dir/itkMathTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkFixedArray;itkVector;itkCovariantVector;itkPoint;itkTriangleHelper;itkVariableSizeMatrix;itkVersor;stdcomplex;vnl_c_vector;vnl_cost_function;vnl_diag_matrix;vnl_file_matrix;vnl_file_vector;vnl_fortran_copy;vnl_least_squares_function;vnl_matrix_fixed;vnl_matrix_fixed_ref;vnl_matrix_ref;vnl_vector_ref;vnl_matrix;vnl_vector;vnl_unary_function;ITKCommonBase;itkSize;itkOffset;itkArray;itkIndex;itkContinuousIndex;itkMatrix;itkVectorContainer;itkMapContainer;itkBoundingBox;itkRGBPixel;itkRGBAPixel;itkVariableLengthVector;itkImageRegion;itkSymmetricSecondRankTensor;itkImage;itkVectorImage;itkNeighborhood;itkImageSourceCommon;itkImageSource;itkImageToImageFilterCommon;itkImageToImageFilterA;itkImageToImageFilterB;itkInPlaceImageFilterA;itkInPlaceImageFilterB;itkDefaultDynamicMeshTraits;itkDefaultStaticMeshTraits;itkFunctionBase;itkArray2D;itkBSplineInterpolationWeightFunction;itkDiffusionTensor3D;itkExtractImageFilter;itkImageBoundaryCondition;itkImageDuplicator;itkImageTransformer;itkImportImageFilter;itkKernelFunctionBase;itkMetaDataObject;itkMinimumMaximumImageCalculator;itkNumericTraits;itkOptimizerParameters;itkPointSet;itkSimpleDataObjectDecorator;itkSpatialFunction;itkSpatialOrientation;itkStreamingImageFilter" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/itkSystemInformation.dir/itkSystemInformation.cxx.o -c /<>/Modules/Core/Common/test/itkSystemInformation.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX executable ../../../../bin/itkSystemInformation make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkSystemInformation.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/itkSystemInformation.dir/itkSystemInformation.cxx.o -o ../../../../bin/itkSystemInformation ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target itkSystemInformation make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/build.make Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Statistics/src /<>/BUILD /<>/BUILD/Modules/Numerics/Statistics/src /<>/BUILD/Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/DependInfo.cmake --color= Scanning dependencies of target ITKStatistics make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/build.make Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/build make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkProbabilityDistribution.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/c++ -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommonHeaderTest2.dir/test/ITKCommonHeaderTest2.cxx.o -c /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest2.cxx In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest2.cxx:24: In file included from /<>/Modules/Core/Common/include/itkFrustumSpatialFunction.hxx:21: In file included from /<>/Modules/Core/Common/include/itkFrustumSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX executable ../../../bin/ITKCommonHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/c++ -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommonHeaderTest9.dir/test/ITKCommonHeaderTest9.cxx.o -c /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest9.cxx In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest9.cxx:24: In file included from /<>/Modules/Core/Common/include/itkTorusInteriorExteriorSpatialFunction.hxx:21: In file included from /<>/Modules/Core/Common/include/itkTorusInteriorExteriorSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX executable ../../../bin/ITKCommonHeaderTest9 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/c++ -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommonHeaderTest6.dir/test/ITKCommonHeaderTest6.cxx.o -c /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest6.cxx In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest6.cxx:23: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX executable ../../../bin/ITKCommonHeaderTest6 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommonHeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCommonHeaderTest2.dir/test/ITKCommonHeaderTest2.cxx.o -o ../../../bin/ITKCommonHeaderTest2 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKCommonHeaderTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Transform/src/CMakeFiles/ITKTransform.dir/build.make Modules/Core/Transform/src/CMakeFiles/ITKTransform.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Transform/src /<>/BUILD /<>/BUILD/Modules/Core/Transform/src /<>/BUILD/Modules/Core/Transform/src/CMakeFiles/ITKTransform.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTransform make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Transform/src/CMakeFiles/ITKTransform.dir/build.make Modules/Core/Transform/src/CMakeFiles/ITKTransform.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommonHeaderTest9.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCommonHeaderTest9.dir/test/ITKCommonHeaderTest9.cxx.o -o ../../../bin/ITKCommonHeaderTest9 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKCommonHeaderTest9 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/build.make Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/depend make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Transform/src/CMakeFiles/ITKTransform.dir/itkTransformBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommonHeaderTest6.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCommonHeaderTest6.dir/test/ITKCommonHeaderTest6.cxx.o -o ../../../bin/ITKCommonHeaderTest6 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKCommonHeaderTest6 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Path/src/CMakeFiles/ITKPath.dir/build.make Modules/Filtering/Path/src/CMakeFiles/ITKPath.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -DFactoryTestLib_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/FactoryTestLib.dir/itkFactoryTestLib.cxx.o -c /<>/Modules/Core/Common/test/itkFactoryTestLib.cxx In file included from /<>/Modules/Core/Common/test/itkFactoryTestLib.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/c++ -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommonHeaderTest10.dir/test/ITKCommonHeaderTest10.cxx.o -c /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest10.cxx In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommonHeaderTest10.cxx:25: In file included from /<>/Modules/Core/Common/include/itkAnnulusOperator.hxx:23: In file included from /<>/Modules/Core/Common/include/itkSphereSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX shared module ../../../../Testing/Temporary/libFactoryTestLib.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/ImageBase/src /<>/BUILD /<>/BUILD/Modules/IO/ImageBase/src /<>/BUILD/Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOImageBase make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/build.make Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/build make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX executable ../../../bin/ITKCommonHeaderTest10 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Path/src /<>/BUILD /<>/BUILD/Modules/Filtering/Path/src /<>/BUILD/Modules/Filtering/Path/src/CMakeFiles/ITKPath.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPath make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Path/src/CMakeFiles/ITKPath.dir/build.make Modules/Filtering/Path/src/CMakeFiles/ITKPath.dir/build make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkImageSeriesWriter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Filtering/Path/src/CMakeFiles/ITKPath.dir/itkChainCodePath2D.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FactoryTestLib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../../Testing/Temporary/libFactoryTestLib.so CMakeFiles/FactoryTestLib.dir/itkFactoryTestLib.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommonHeaderTest10.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCommonHeaderTest10.dir/test/ITKCommonHeaderTest10.cxx.o -o ../../../bin/ITKCommonHeaderTest10 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target FactoryTestLib make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/ClientTestLibraryA.dir/build.make Modules/Core/Common/test/CMakeFiles/ClientTestLibraryA.dir/depend make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKCommonHeaderTest10 make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Filtering/Path/src/CMakeFiles/ITKPath.dir/itkOrthogonallyCorrected2DParametricPath.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/test /<>/BUILD /<>/BUILD/Modules/Core/Common/test /<>/BUILD/Modules/Core/Common/test/CMakeFiles/ClientTestLibraryA.dir/DependInfo.cmake --color= Scanning dependencies of target ClientTestLibraryA make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/ClientTestLibraryA.dir/build.make Modules/Core/Common/test/CMakeFiles/ClientTestLibraryA.dir/build make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/test/CMakeFiles/ClientTestLibraryA.dir/ClientTestLibraryA.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/c++ -DITKStatistics_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKStatistics.dir/itkProbabilityDistribution.cxx.o -c /<>/Modules/Numerics/Statistics/src/itkProbabilityDistribution.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkDenseFrequencyContainer2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/src && /usr/bin/c++ -DITKTransform_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKTransform.dir/itkTransformBase.cxx.o -c /<>/Modules/Core/Transform/src/itkTransformBase.cxx In file included from /<>/Modules/Core/Transform/src/itkTransformBase.cxx:20: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX shared library ../../../../lib/libITKTransform-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/itkMathTest.dir/itkMathTest.cxx.o -c /<>/Modules/Core/Common/test/itkMathTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Linking CXX executable ../../../../bin/itkMathTest make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKTransform.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKTransform-4.12.so.1 -o ../../../../lib/libITKTransform-4.12.so.1 CMakeFiles/ITKTransform.dir/itkTransformBase.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKTransform-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 33%] Built target ITKTransform make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/ClientTestLibraryC.dir/build.make Modules/Core/Common/test/CMakeFiles/ClientTestLibraryC.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkMathTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/itkMathTest.dir/itkMathTest.cxx.o -o ../../../../bin/itkMathTest ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/test /<>/BUILD /<>/BUILD/Modules/Core/Common/test /<>/BUILD/Modules/Core/Common/test/CMakeFiles/ClientTestLibraryC.dir/DependInfo.cmake --color= Scanning dependencies of target ClientTestLibraryC make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/ClientTestLibraryC.dir/build.make Modules/Core/Common/test/CMakeFiles/ClientTestLibraryC.dir/build make[2]: Entering directory '/<>/BUILD' [ 33%] Built target itkMathTest make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/ClientTestLibraryB.dir/build.make Modules/Core/Common/test/CMakeFiles/ClientTestLibraryB.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/src && /usr/bin/c++ -DITKPath_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKPath.dir/itkChainCodePath2D.cxx.o -c /<>/Modules/Filtering/Path/src/itkChainCodePath2D.cxx make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/FiniteDifference/CMakeFiles/ITKFiniteDifferenceHeaderTest1.dir/build.make Modules/Core/FiniteDifference/CMakeFiles/ITKFiniteDifferenceHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/test/CMakeFiles/ClientTestLibraryC.dir/ClientTestLibraryC.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 33%] Generating test/ITKFiniteDifferenceHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/FiniteDifference && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKFiniteDifference /<>/Modules/Core/FiniteDifference /<>/BUILD/Modules/Core/FiniteDifference 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/test /<>/BUILD /<>/BUILD/Modules/Core/Common/test /<>/BUILD/Modules/Core/Common/test/CMakeFiles/ClientTestLibraryB.dir/DependInfo.cmake --color= Scanning dependencies of target ClientTestLibraryB make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/ClientTestLibraryB.dir/build.make Modules/Core/Common/test/CMakeFiles/ClientTestLibraryB.dir/build make[3]: Entering directory '/<>/BUILD' [ 33%] Building CXX object Modules/Core/Common/test/CMakeFiles/ClientTestLibraryB.dir/ClientTestLibraryB.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/FiniteDifference /<>/BUILD /<>/BUILD/Modules/Core/FiniteDifference /<>/BUILD/Modules/Core/FiniteDifference/CMakeFiles/ITKFiniteDifferenceHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFiniteDifferenceHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/FiniteDifference/CMakeFiles/ITKFiniteDifferenceHeaderTest1.dir/build.make Modules/Core/FiniteDifference/CMakeFiles/ITKFiniteDifferenceHeaderTest1.dir/build make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKCommonSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFilterBase/CMakeFiles/ITKImageFilterBaseHeaderTest1.dir/build.make Modules/Filtering/ImageFilterBase/CMakeFiles/ITKImageFilterBaseHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Core/FiniteDifference/CMakeFiles/ITKFiniteDifferenceHeaderTest1.dir/test/ITKFiniteDifferenceHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKImageFilterBaseHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFilterBase && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageFilterBase /<>/Modules/Filtering/ImageFilterBase /<>/BUILD/Modules/Filtering/ImageFilterBase 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFilterBase /<>/BUILD /<>/BUILD/Modules/Filtering/ImageFilterBase /<>/BUILD/Modules/Filtering/ImageFilterBase/CMakeFiles/ITKImageFilterBaseHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFilterBaseHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFilterBase/CMakeFiles/ITKImageFilterBaseHeaderTest1.dir/build.make Modules/Filtering/ImageFilterBase/CMakeFiles/ITKImageFilterBaseHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/ImageFilterBase/CMakeFiles/ITKImageFilterBaseHeaderTest1.dir/test/ITKImageFilterBaseHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/src && /usr/bin/c++ -DITKIOImageBase_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOImageBase.dir/itkImageSeriesWriter.cxx.o -c /<>/Modules/IO/ImageBase/src/itkImageSeriesWriter.cxx In file included from /<>/Modules/IO/ImageBase/src/itkImageSeriesWriter.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageSeriesWriter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkImageFileReaderException.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/src && /usr/bin/c++ -DITKPath_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKPath.dir/itkOrthogonallyCorrected2DParametricPath.cxx.o -c /<>/Modules/Filtering/Path/src/itkOrthogonallyCorrected2DParametricPath.cxx In file included from /<>/Modules/Filtering/Path/src/itkOrthogonallyCorrected2DParametricPath.cxx:18: In file included from /<>/Modules/Filtering/Path/include/itkOrthogonallyCorrected2DParametricPath.h:21: In file included from /<>/Modules/Filtering/Path/include/itkParametricPath.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../lib/libITKPath-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/c++ -DITKStatistics_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKStatistics.dir/itkDenseFrequencyContainer2.cxx.o -c /<>/Modules/Numerics/Statistics/src/itkDenseFrequencyContainer2.cxx In file included from /<>/Modules/Numerics/Statistics/src/itkDenseFrequencyContainer2.cxx:18: In file included from /<>/Modules/Numerics/Statistics/include/itkDenseFrequencyContainer2.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkSparseFrequencyContainer2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKPath.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKPath-4.12.so.1 -o ../../../../lib/libITKPath-4.12.so.1 CMakeFiles/ITKPath.dir/itkChainCodePath2D.cxx.o CMakeFiles/ITKPath.dir/itkOrthogonallyCorrected2DParametricPath.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKPath-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKPath make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/CurvatureFlow/CMakeFiles/ITKCurvatureFlowHeaderTest1.dir/build.make Modules/Filtering/CurvatureFlow/CMakeFiles/ITKCurvatureFlowHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKCurvatureFlowHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/CurvatureFlow && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKCurvatureFlow /<>/Modules/Filtering/CurvatureFlow /<>/BUILD/Modules/Filtering/CurvatureFlow 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/CurvatureFlow /<>/BUILD /<>/BUILD/Modules/Filtering/CurvatureFlow /<>/BUILD/Modules/Filtering/CurvatureFlow/CMakeFiles/ITKCurvatureFlowHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCurvatureFlowHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/CurvatureFlow/CMakeFiles/ITKCurvatureFlowHeaderTest1.dir/build.make Modules/Filtering/CurvatureFlow/CMakeFiles/ITKCurvatureFlowHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/CurvatureFlow/CMakeFiles/ITKCurvatureFlowHeaderTest1.dir/test/ITKCurvatureFlowHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/src && /usr/bin/c++ -DITKIOImageBase_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOImageBase.dir/itkImageFileReaderException.cxx.o -c /<>/Modules/IO/ImageBase/src/itkImageFileReaderException.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkImageFileWriter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/FiniteDifference && /usr/bin/c++ -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFiniteDifferenceHeaderTest1.dir/test/ITKFiniteDifferenceHeaderTest1.cxx.o -c /<>/BUILD/Modules/Core/FiniteDifference/test/ITKFiniteDifferenceHeaderTest1.cxx In file included from /<>/BUILD/Modules/Core/FiniteDifference/test/ITKFiniteDifferenceHeaderTest1.cxx:23: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.hxx:20: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFilterBase && /usr/bin/c++ -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFilterBaseHeaderTest1.dir/test/ITKImageFilterBaseHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/ImageFilterBase/test/ITKImageFilterBaseHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/ImageFilterBase/test/ITKImageFilterBaseHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.hxx:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKFiniteDifferenceHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKImageFilterBaseHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/FiniteDifference && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFiniteDifferenceHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKFiniteDifferenceHeaderTest1.dir/test/ITKFiniteDifferenceHeaderTest1.cxx.o -o ../../../bin/ITKFiniteDifferenceHeaderTest1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKFiniteDifferenceHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/ImageAdaptors/CMakeFiles/ITKImageAdaptorsHeaderTest1.dir/build.make Modules/Core/ImageAdaptors/CMakeFiles/ITKImageAdaptorsHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKImageAdaptorsHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFilterBase && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageFilterBaseHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageFilterBaseHeaderTest1.dir/test/ITKImageFilterBaseHeaderTest1.cxx.o -o ../../../bin/ITKImageFilterBaseHeaderTest1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageAdaptors && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageAdaptors /<>/Modules/Core/ImageAdaptors /<>/BUILD/Modules/Core/ImageAdaptors 35 1 make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKImageFilterBaseHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Transform/CMakeFiles/ITKTransformHeaderTest2.dir/build.make Modules/Core/Transform/CMakeFiles/ITKTransformHeaderTest2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKTransformHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -DClientTestLibraryA_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ClientTestLibraryA.dir/ClientTestLibraryA.cxx.o -c /<>/Modules/Core/Common/test/ClientTestLibraryA.cxx In file included from /<>/Modules/Core/Common/test/ClientTestLibraryA.cxx:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKTransform /<>/Modules/Core/Transform /<>/BUILD/Modules/Core/Transform 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../Testing/Temporary/libClientTestLibraryA.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/ImageAdaptors /<>/BUILD /<>/BUILD/Modules/Core/ImageAdaptors /<>/BUILD/Modules/Core/ImageAdaptors/CMakeFiles/ITKImageAdaptorsHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageAdaptorsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/ImageAdaptors/CMakeFiles/ITKImageAdaptorsHeaderTest1.dir/build.make Modules/Core/ImageAdaptors/CMakeFiles/ITKImageAdaptorsHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Core/ImageAdaptors/CMakeFiles/ITKImageAdaptorsHeaderTest1.dir/test/ITKImageAdaptorsHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Transform /<>/BUILD /<>/BUILD/Modules/Core/Transform /<>/BUILD/Modules/Core/Transform/CMakeFiles/ITKTransformHeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTransformHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Transform/CMakeFiles/ITKTransformHeaderTest2.dir/build.make Modules/Core/Transform/CMakeFiles/ITKTransformHeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Core/Transform/CMakeFiles/ITKTransformHeaderTest2.dir/test/ITKTransformHeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/c++ -DITKStatistics_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKStatistics.dir/itkSparseFrequencyContainer2.cxx.o -c /<>/Modules/Numerics/Statistics/src/itkSparseFrequencyContainer2.cxx In file included from /<>/Modules/Numerics/Statistics/src/itkSparseFrequencyContainer2.cxx:18: In file included from /<>/Modules/Numerics/Statistics/include/itkSparseFrequencyContainer2.h:25: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkChiSquareDistribution.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClientTestLibraryA.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libClientTestLibraryA.so -o ../../../../Testing/Temporary/libClientTestLibraryA.so CMakeFiles/ClientTestLibraryA.dir/ClientTestLibraryA.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ClientTestLibraryA make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Transform/CMakeFiles/ITKTransformHeaderTest1.dir/build.make Modules/Core/Transform/CMakeFiles/ITKTransformHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKTransformHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKTransform /<>/Modules/Core/Transform /<>/BUILD/Modules/Core/Transform 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Transform /<>/BUILD /<>/BUILD/Modules/Core/Transform /<>/BUILD/Modules/Core/Transform/CMakeFiles/ITKTransformHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTransformHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Transform/CMakeFiles/ITKTransformHeaderTest1.dir/build.make Modules/Core/Transform/CMakeFiles/ITKTransformHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Core/Transform/CMakeFiles/ITKTransformHeaderTest1.dir/test/ITKTransformHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/src && /usr/bin/c++ -DITKIOImageBase_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOImageBase.dir/itkImageFileWriter.cxx.o -c /<>/Modules/IO/ImageBase/src/itkImageFileWriter.cxx In file included from /<>/Modules/IO/ImageBase/src/itkImageFileWriter.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkArchetypeSeriesFileNames.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/CurvatureFlow && /usr/bin/c++ -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCurvatureFlowHeaderTest1.dir/test/ITKCurvatureFlowHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/CurvatureFlow/test/ITKCurvatureFlowHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/CurvatureFlow/test/ITKCurvatureFlowHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/CurvatureFlow/include/itkCurvatureFlowImageFilter.hxx:21: In file included from /<>/Modules/Filtering/CurvatureFlow/include/itkCurvatureFlowImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKCurvatureFlowHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/CurvatureFlow && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCurvatureFlowHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCurvatureFlowHeaderTest1.dir/test/ITKCurvatureFlowHeaderTest1.cxx.o -o ../../../bin/ITKCurvatureFlowHeaderTest1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKCurvatureFlowHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageCompose/CMakeFiles/ITKImageComposeHeaderTest1.dir/build.make Modules/Filtering/ImageCompose/CMakeFiles/ITKImageComposeHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKImageComposeHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageCompose /<>/Modules/Filtering/ImageCompose /<>/BUILD/Modules/Filtering/ImageCompose 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageCompose /<>/BUILD /<>/BUILD/Modules/Filtering/ImageCompose /<>/BUILD/Modules/Filtering/ImageCompose/CMakeFiles/ITKImageComposeHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageComposeHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageCompose/CMakeFiles/ITKImageComposeHeaderTest1.dir/build.make Modules/Filtering/ImageCompose/CMakeFiles/ITKImageComposeHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/ImageCompose/CMakeFiles/ITKImageComposeHeaderTest1.dir/test/ITKImageComposeHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -DClientTestLibraryC_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ClientTestLibraryC.dir/ClientTestLibraryC.cxx.o -c /<>/Modules/Core/Common/test/ClientTestLibraryC.cxx In file included from /<>/Modules/Core/Common/test/ClientTestLibraryC.cxx:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../Testing/Temporary/libClientTestLibraryC.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -DClientTestLibraryB_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ClientTestLibraryB.dir/ClientTestLibraryB.cxx.o -c /<>/Modules/Core/Common/test/ClientTestLibraryB.cxx In file included from /<>/Modules/Core/Common/test/ClientTestLibraryB.cxx:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClientTestLibraryC.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libClientTestLibraryC.so -o ../../../../Testing/Temporary/libClientTestLibraryC.so CMakeFiles/ClientTestLibraryC.dir/ClientTestLibraryC.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared module ../../../../Testing/Temporary/libClientTestLibraryB.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ClientTestLibraryC make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Path/CMakeFiles/ITKPathHeaderTest1.dir/build.make Modules/Filtering/Path/CMakeFiles/ITKPathHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKPathHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKPath /<>/Modules/Filtering/Path /<>/BUILD/Modules/Filtering/Path 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Path /<>/BUILD /<>/BUILD/Modules/Filtering/Path /<>/BUILD/Modules/Filtering/Path/CMakeFiles/ITKPathHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPathHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Path/CMakeFiles/ITKPathHeaderTest1.dir/build.make Modules/Filtering/Path/CMakeFiles/ITKPathHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/Path/CMakeFiles/ITKPathHeaderTest1.dir/test/ITKPathHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ClientTestLibraryB.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../../Testing/Temporary/libClientTestLibraryB.so CMakeFiles/ClientTestLibraryB.dir/ClientTestLibraryB.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ClientTestLibraryB make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageSources/CMakeFiles/ITKImageSourcesHeaderTest1.dir/build.make Modules/Filtering/ImageSources/CMakeFiles/ITKImageSourcesHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKImageSourcesHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageSources && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageSources /<>/Modules/Filtering/ImageSources /<>/BUILD/Modules/Filtering/ImageSources 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageSources /<>/BUILD /<>/BUILD/Modules/Filtering/ImageSources /<>/BUILD/Modules/Filtering/ImageSources/CMakeFiles/ITKImageSourcesHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageSourcesHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageSources/CMakeFiles/ITKImageSourcesHeaderTest1.dir/build.make Modules/Filtering/ImageSources/CMakeFiles/ITKImageSourcesHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/ImageSources/CMakeFiles/ITKImageSourcesHeaderTest1.dir/test/ITKImageSourcesHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageAdaptors && /usr/bin/c++ -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageAdaptorsHeaderTest1.dir/test/ITKImageAdaptorsHeaderTest1.cxx.o -c /<>/BUILD/Modules/Core/ImageAdaptors/test/ITKImageAdaptorsHeaderTest1.cxx In file included from /<>/BUILD/Modules/Core/ImageAdaptors/test/ITKImageAdaptorsHeaderTest1.cxx:24: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.hxx:20: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/c++ -DITKStatistics_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKStatistics.dir/itkChiSquareDistribution.cxx.o -c /<>/Modules/Numerics/Statistics/src/itkChiSquareDistribution.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKImageAdaptorsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkGaussianDistribution.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageAdaptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageAdaptorsHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageAdaptorsHeaderTest1.dir/test/ITKImageAdaptorsHeaderTest1.cxx.o -o ../../../bin/ITKImageAdaptorsHeaderTest1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKImageAdaptorsHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Polynomials/src/CMakeFiles/ITKPolynomials.dir/build.make Modules/Numerics/Polynomials/src/CMakeFiles/ITKPolynomials.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform && /usr/bin/c++ -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformHeaderTest2.dir/test/ITKTransformHeaderTest2.cxx.o -c /<>/BUILD/Modules/Core/Transform/test/ITKTransformHeaderTest2.cxx In file included from /<>/BUILD/Modules/Core/Transform/test/ITKTransformHeaderTest2.cxx:23: In file included from /<>/Modules/Core/Transform/include/itkBSplineTransformInitializer.hxx:23: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Polynomials/src /<>/BUILD /<>/BUILD/Modules/Numerics/Polynomials/src /<>/BUILD/Modules/Numerics/Polynomials/src/CMakeFiles/ITKPolynomials.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPolynomials make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Polynomials/src/CMakeFiles/ITKPolynomials.dir/build.make Modules/Numerics/Polynomials/src/CMakeFiles/ITKPolynomials.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKTransformHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Polynomials/src/CMakeFiles/ITKPolynomials.dir/itkMultivariateLegendrePolynomial.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKTransformHeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKTransformHeaderTest2.dir/test/ITKTransformHeaderTest2.cxx.o -o ../../../bin/ITKTransformHeaderTest2 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKTransformHeaderTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BiasCorrection/src/CMakeFiles/ITKBiasCorrection.dir/build.make Modules/Filtering/BiasCorrection/src/CMakeFiles/ITKBiasCorrection.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform && /usr/bin/c++ -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformHeaderTest1.dir/test/ITKTransformHeaderTest1.cxx.o -c /<>/BUILD/Modules/Core/Transform/test/ITKTransformHeaderTest1.cxx In file included from /<>/BUILD/Modules/Core/Transform/test/ITKTransformHeaderTest1.cxx:23: In file included from /<>/Modules/Core/Transform/include/itkRigid3DPerspectiveTransform.hxx:21: In file included from /<>/Modules/Core/Transform/include/itkRigid3DPerspectiveTransform.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKTransformHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BiasCorrection/src /<>/BUILD /<>/BUILD/Modules/Filtering/BiasCorrection/src /<>/BUILD/Modules/Filtering/BiasCorrection/src/CMakeFiles/ITKBiasCorrection.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBiasCorrection make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BiasCorrection/src/CMakeFiles/ITKBiasCorrection.dir/build.make Modules/Filtering/BiasCorrection/src/CMakeFiles/ITKBiasCorrection.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/BiasCorrection/src/CMakeFiles/ITKBiasCorrection.dir/itkCompositeValleyFunction.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKTransformHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKTransformHeaderTest1.dir/test/ITKTransformHeaderTest1.cxx.o -o ../../../bin/ITKTransformHeaderTest1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKTransformHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Colormap/CMakeFiles/ITKColormapHeaderTest1.dir/build.make Modules/Filtering/Colormap/CMakeFiles/ITKColormapHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKColormapHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Colormap && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKColormap /<>/Modules/Filtering/Colormap /<>/BUILD/Modules/Filtering/Colormap 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Colormap /<>/BUILD /<>/BUILD/Modules/Filtering/Colormap /<>/BUILD/Modules/Filtering/Colormap/CMakeFiles/ITKColormapHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKColormapHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/src && /usr/bin/c++ -DITKIOImageBase_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOImageBase.dir/itkArchetypeSeriesFileNames.cxx.o -c /<>/Modules/IO/ImageBase/src/itkArchetypeSeriesFileNames.cxx make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Colormap/CMakeFiles/ITKColormapHeaderTest1.dir/build.make Modules/Filtering/Colormap/CMakeFiles/ITKColormapHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/Colormap/CMakeFiles/ITKColormapHeaderTest1.dir/test/ITKColormapHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeHeaderTest1.dir/test/ITKImageComposeHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/ImageCompose/test/ITKImageComposeHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/ImageCompose/test/ITKImageComposeHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/ImageCompose/include/itkJoinSeriesImageFilter.hxx:21: In file included from /<>/Modules/Filtering/ImageCompose/include/itkJoinSeriesImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKImageComposeHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Path/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathHeaderTest1.dir/test/ITKPathHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/Path/test/ITKPathHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/Path/test/ITKPathHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/Path/include/itkParametricPath.hxx:21: In file included from /<>/Modules/Filtering/Path/include/itkParametricPath.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKPathHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageComposeHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageComposeHeaderTest1.dir/test/ITKImageComposeHeaderTest1.cxx.o -o ../../../bin/ITKImageComposeHeaderTest1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKImageComposeHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkIOCommon.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/c++ -DITKStatistics_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKStatistics.dir/itkGaussianDistribution.cxx.o -c /<>/Modules/Numerics/Statistics/src/itkGaussianDistribution.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkTDistribution.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKPathHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKPathHeaderTest1.dir/test/ITKPathHeaderTest1.cxx.o -o ../../../bin/ITKPathHeaderTest1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKPathHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkNumericSeriesFileNames.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageSources && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageSourcesHeaderTest1.dir/test/ITKImageSourcesHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/ImageSources/test/ITKImageSourcesHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/ImageSources/test/ITKImageSourcesHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/ImageSources/include/itkGridImageSource.hxx:22: In file included from /<>/Modules/Filtering/ImageSources/include/itkGridImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkGenerateImageSource.h:22: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKImageSourcesHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BiasCorrection/src && /usr/bin/c++ -DITKBiasCorrection_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKBiasCorrection.dir/itkCompositeValleyFunction.cxx.o -c /<>/Modules/Filtering/BiasCorrection/src/itkCompositeValleyFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/BiasCorrection/src/CMakeFiles/ITKBiasCorrection.dir/itkCacheableScalarFunction.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Polynomials/src && /usr/bin/c++ -DITKPolynomials_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKPolynomials.dir/itkMultivariateLegendrePolynomial.cxx.o -c /<>/Modules/Numerics/Polynomials/src/itkMultivariateLegendrePolynomial.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../lib/libITKPolynomials-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageSources && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageSourcesHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageSourcesHeaderTest1.dir/test/ITKImageSourcesHeaderTest1.cxx.o -o ../../../bin/ITKImageSourcesHeaderTest1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKImageSourcesHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FFT/src/CMakeFiles/ITKFFT.dir/build.make Modules/Filtering/FFT/src/CMakeFiles/ITKFFT.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Polynomials/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKPolynomials.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKPolynomials-4.12.so.1 -o ../../../../lib/libITKPolynomials-4.12.so.1 CMakeFiles/ITKPolynomials.dir/itkMultivariateLegendrePolynomial.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Polynomials/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKPolynomials-4.12.so.1 ../../../../lib/libITKPolynomials-4.12.so.1 ../../../../lib/libITKPolynomials-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FFT/src /<>/BUILD /<>/BUILD/Modules/Filtering/FFT/src /<>/BUILD/Modules/Filtering/FFT/src/CMakeFiles/ITKFFT.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFFT make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FFT/src/CMakeFiles/ITKFFT.dir/build.make Modules/Filtering/FFT/src/CMakeFiles/ITKFFT.dir/build make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKPolynomials make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Eigen/CMakeFiles/ITKEigenHeaderTest1.dir/build.make Modules/Numerics/Eigen/CMakeFiles/ITKEigenHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/FFT/src/CMakeFiles/ITKFFT.dir/itkFFTWGlobalConfiguration.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKEigenHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Eigen && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKEigen /<>/Modules/Numerics/Eigen /<>/BUILD/Modules/Numerics/Eigen 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Eigen /<>/BUILD /<>/BUILD/Modules/Numerics/Eigen /<>/BUILD/Modules/Numerics/Eigen/CMakeFiles/ITKEigenHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKEigenHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Eigen/CMakeFiles/ITKEigenHeaderTest1.dir/build.make Modules/Numerics/Eigen/CMakeFiles/ITKEigenHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Eigen/CMakeFiles/ITKEigenHeaderTest1.dir/test/ITKEigenHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BiasCorrection/src && /usr/bin/c++ -DITKBiasCorrection_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKBiasCorrection.dir/itkCacheableScalarFunction.cxx.o -c /<>/Modules/Filtering/BiasCorrection/src/itkCacheableScalarFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../lib/libITKBiasCorrection-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Colormap && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKColormapHeaderTest1.dir/test/ITKColormapHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/Colormap/test/ITKColormapHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/Colormap/test/ITKColormapHeaderTest1.cxx:24: In file included from /<>/Modules/Filtering/Colormap/include/itkScalarToRGBColormapImageFilter.hxx:21: In file included from /<>/Modules/Filtering/Colormap/include/itkScalarToRGBColormapImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKColormapHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Colormap && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKColormapHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKColormapHeaderTest1.dir/test/ITKColormapHeaderTest1.cxx.o -o ../../../bin/ITKColormapHeaderTest1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKColormapHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformFactory/src/CMakeFiles/ITKTransformFactory.dir/build.make Modules/IO/TransformFactory/src/CMakeFiles/ITKTransformFactory.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BiasCorrection/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKBiasCorrection.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKBiasCorrection-4.12.so.1 -o ../../../../lib/libITKBiasCorrection-4.12.so.1 CMakeFiles/ITKBiasCorrection.dir/itkCompositeValleyFunction.cxx.o CMakeFiles/ITKBiasCorrection.dir/itkCacheableScalarFunction.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BiasCorrection/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKBiasCorrection-4.12.so.1 ../../../../lib/libITKBiasCorrection-4.12.so.1 ../../../../lib/libITKBiasCorrection-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/c++ -DITKStatistics_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKStatistics.dir/itkTDistribution.cxx.o -c /<>/Modules/Numerics/Statistics/src/itkTDistribution.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkNormalVariateGenerator.cxx.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKBiasCorrection make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/KLMRegionGrowing/src/CMakeFiles/ITKKLMRegionGrowing.dir/build.make Modules/Segmentation/KLMRegionGrowing/src/CMakeFiles/ITKKLMRegionGrowing.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformFactory/src /<>/BUILD /<>/BUILD/Modules/IO/TransformFactory/src /<>/BUILD/Modules/IO/TransformFactory/src/CMakeFiles/ITKTransformFactory.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTransformFactory make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformFactory/src/CMakeFiles/ITKTransformFactory.dir/build.make Modules/IO/TransformFactory/src/CMakeFiles/ITKTransformFactory.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/KLMRegionGrowing/src /<>/BUILD /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/src /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/src/CMakeFiles/ITKKLMRegionGrowing.dir/DependInfo.cmake --color= Scanning dependencies of target ITKKLMRegionGrowing make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/KLMRegionGrowing/src/CMakeFiles/ITKKLMRegionGrowing.dir/build.make Modules/Segmentation/KLMRegionGrowing/src/CMakeFiles/ITKKLMRegionGrowing.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/IO/TransformFactory/src/CMakeFiles/ITKTransformFactory.dir/itkTransformFactoryBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Segmentation/KLMRegionGrowing/src/CMakeFiles/ITKKLMRegionGrowing.dir/itkSegmentationRegion.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Eigen && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKEigenHeaderTest1.dir/test/ITKEigenHeaderTest1.cxx.o -c /<>/BUILD/Modules/Numerics/Eigen/test/ITKEigenHeaderTest1.cxx In file included from /<>/BUILD/Modules/Numerics/Eigen/test/ITKEigenHeaderTest1.cxx:23: In file included from /<>/Modules/Numerics/Eigen/include/itkEigenAnalysis2DImageFilter.hxx:21: In file included from /<>/Modules/Numerics/Eigen/include/itkEigenAnalysis2DImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKEigenHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Eigen && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKEigenHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKEigenHeaderTest1.dir/test/ITKEigenHeaderTest1.cxx.o -o ../../../bin/ITKEigenHeaderTest1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKEigenHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Bridge/VTK/src/CMakeFiles/ITKVTK.dir/build.make Modules/Bridge/VTK/src/CMakeFiles/ITKVTK.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Bridge/VTK/src /<>/BUILD /<>/BUILD/Modules/Bridge/VTK/src /<>/BUILD/Modules/Bridge/VTK/src/CMakeFiles/ITKVTK.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVTK make[3]: Leaving directory '/<>/BUILD' make -f Modules/Bridge/VTK/src/CMakeFiles/ITKVTK.dir/build.make Modules/Bridge/VTK/src/CMakeFiles/ITKVTK.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Bridge/VTK/src/CMakeFiles/ITKVTK.dir/itkVTKImageExportBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/src && /usr/bin/c++ -DITKFFT_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFFT.dir/itkFFTWGlobalConfiguration.cxx.o -c /<>/Modules/Filtering/FFT/src/itkFFTWGlobalConfiguration.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../lib/libITKFFT-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFFT.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKFFT-4.12.so.1 -o ../../../../lib/libITKFFT-4.12.so.1 CMakeFiles/ITKFFT.dir/itkFFTWGlobalConfiguration.cxx.o ../../../../lib/libITKCommon-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3_threads -lfftw3f -lfftw3f_threads -lfftw3f_threads ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKFFT-4.12.so.1 ../../../../lib/libITKFFT-4.12.so.1 ../../../../lib/libITKFFT-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKFFT make[2]: Leaving directory '/<>/BUILD' make -f Modules/Video/Core/src/CMakeFiles/ITKVideoCore.dir/build.make Modules/Video/Core/src/CMakeFiles/ITKVideoCore.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Video/Core/src /<>/BUILD /<>/BUILD/Modules/Video/Core/src /<>/BUILD/Modules/Video/Core/src/CMakeFiles/ITKVideoCore.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVideoCore make[3]: Leaving directory '/<>/BUILD' make -f Modules/Video/Core/src/CMakeFiles/ITKVideoCore.dir/build.make Modules/Video/Core/src/CMakeFiles/ITKVideoCore.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Video/Core/src/CMakeFiles/ITKVideoCore.dir/itkTemporalRegion.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/src && /usr/bin/c++ -DITKKLMRegionGrowing_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKKLMRegionGrowing.dir/itkSegmentationRegion.cxx.o -c /<>/Modules/Segmentation/KLMRegionGrowing/src/itkSegmentationRegion.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Segmentation/KLMRegionGrowing/src/CMakeFiles/ITKKLMRegionGrowing.dir/itkKLMSegmentationRegion.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/c++ -DITKStatistics_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKStatistics.dir/itkNormalVariateGenerator.cxx.o -c /<>/Modules/Numerics/Statistics/src/itkNormalVariateGenerator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkDecisionRule.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Bridge/VTK/src && /usr/bin/c++ -DITKVTK_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKVTK.dir/itkVTKImageExportBase.cxx.o -c /<>/Modules/Bridge/VTK/src/itkVTKImageExportBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../lib/libITKVTK-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/src && /usr/bin/c++ -DITKVideoCore_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Video/Core/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKVideoCore.dir/itkTemporalRegion.cxx.o -c /<>/Modules/Video/Core/src/itkTemporalRegion.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Video/Core/src/CMakeFiles/ITKVideoCore.dir/itkTemporalDataObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Bridge/VTK/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVTK.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKVTK-4.12.so.1 -o ../../../../lib/libITKVTK-4.12.so.1 CMakeFiles/ITKVTK.dir/itkVTKImageExportBase.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Bridge/VTK/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKVTK-4.12.so.1 ../../../../lib/libITKVTK-4.12.so.1 ../../../../lib/libITKVTK-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKVTK make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferenceSwig.dir/build.make Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferenceSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/FiniteDifference/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKFiniteDifference /<>/BUILD/Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferenceSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFiniteDifferenceSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferenceSwig.dir/build.make Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferenceSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../Typedefs/itkDenseFiniteDifferenceImageFilter.i, ../../Typedefs/itkFiniteDifferenceFunction.i, ../../Typedefs/itkFiniteDifferenceImageFilter.i, ../../Typedefs/itkDenseFiniteDifferenceImageFilterSwigInterface.h, ../../Typedefs/itkFiniteDifferenceFunctionSwigInterface.h, ../../Typedefs/itkFiniteDifferenceImageFilterSwigInterface.h, ../../Typedefs/itkDenseFiniteDifferenceImageFilter.idx, ../../Typedefs/itkFiniteDifferenceFunction.idx, ../../Typedefs/itkFiniteDifferenceImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/c++ -DITKStatistics_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKStatistics.dir/itkDecisionRule.cxx.o -c /<>/Modules/Numerics/Statistics/src/itkDecisionRule.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkMaximumDecisionRule.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformFactory/src && /usr/bin/c++ -DITKTransformFactory_EXPORTS -DITK_TRANSFORM_FACTORY_MAX_DIM=4 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKTransformFactory.dir/itkTransformFactoryBase.cxx.o -c /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBase.cxx In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBase.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkAzimuthElevationToCartesianTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/IO/TransformFactory/src/CMakeFiles/ITKTransformFactory.dir/itkTransformFactoryBaseRegisterFloatParameters.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/src && /usr/bin/c++ -DITKKLMRegionGrowing_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKKLMRegionGrowing.dir/itkKLMSegmentationRegion.cxx.o -c /<>/Modules/Segmentation/KLMRegionGrowing/src/itkKLMSegmentationRegion.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Segmentation/KLMRegionGrowing/src/CMakeFiles/ITKKLMRegionGrowing.dir/itkSegmentationBorder.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/c++ -DITKStatistics_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKStatistics.dir/itkMaximumDecisionRule.cxx.o -c /<>/Modules/Numerics/Statistics/src/itkMaximumDecisionRule.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkMaximumRatioDecisionRule.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/src && /usr/bin/c++ -DITKVideoCore_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Video/Core/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKVideoCore.dir/itkTemporalDataObject.cxx.o -c /<>/Modules/Video/Core/src/itkTemporalDataObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Video/Core/src/CMakeFiles/ITKVideoCore.dir/itkTemporalProcessObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/src && /usr/bin/c++ -DITKKLMRegionGrowing_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKKLMRegionGrowing.dir/itkSegmentationBorder.cxx.o -c /<>/Modules/Segmentation/KLMRegionGrowing/src/itkSegmentationBorder.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Segmentation/KLMRegionGrowing/src/CMakeFiles/ITKKLMRegionGrowing.dir/itkKLMSegmentationBorder.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/c++ -DITKStatistics_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKStatistics.dir/itkMaximumRatioDecisionRule.cxx.o -c /<>/Modules/Numerics/Statistics/src/itkMaximumRatioDecisionRule.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Statistics/src/CMakeFiles/ITKStatistics.dir/itkMinimumDecisionRule.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/src && /usr/bin/c++ -DITKKLMRegionGrowing_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKKLMRegionGrowing.dir/itkKLMSegmentationBorder.cxx.o -c /<>/Modules/Segmentation/KLMRegionGrowing/src/itkKLMSegmentationBorder.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../lib/libITKKLMRegionGrowing-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/c++ -DITKStatistics_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKStatistics.dir/itkMinimumDecisionRule.cxx.o -c /<>/Modules/Numerics/Statistics/src/itkMinimumDecisionRule.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../lib/libITKStatistics-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKKLMRegionGrowing.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKKLMRegionGrowing-4.12.so.1 -o ../../../../lib/libITKKLMRegionGrowing-4.12.so.1 CMakeFiles/ITKKLMRegionGrowing.dir/itkSegmentationRegion.cxx.o CMakeFiles/ITKKLMRegionGrowing.dir/itkKLMSegmentationRegion.cxx.o CMakeFiles/ITKKLMRegionGrowing.dir/itkSegmentationBorder.cxx.o CMakeFiles/ITKKLMRegionGrowing.dir/itkKLMSegmentationBorder.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../../lib/libITKKLMRegionGrowing-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKKLMRegionGrowing make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBaseSwig.dir/build.make Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBaseSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFilterBase/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageFilterBase /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBaseSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFilterBaseSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBaseSwig.dir/build.make Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBaseSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../Typedefs/itkBoxImageFilter.i, ../../Typedefs/itkCastImageFilter.i, ../../Typedefs/itkNoiseImageFilter.i, ../../Typedefs/itkRecursiveSeparableImageFilter.i, ../../Typedefs/itkVectorCastImageFilter.i, ../../Typedefs/itkBoxImageFilterSwigInterface.h, ../../Typedefs/itkCastImageFilterSwigInterface.h, ../../Typedefs/itkNoiseImageFilterSwigInterface.h, ../../Typedefs/itkRecursiveSeparableImageFilterSwigInterface.h, ../../Typedefs/itkVectorCastImageFilterSwigInterface.h, ../../Typedefs/itkBoxImageFilter.idx, ../../Typedefs/itkCastImageFilter.idx, ../../Typedefs/itkNoiseImageFilter.idx, ../../Typedefs/itkRecursiveSeparableImageFilter.idx, ../../Typedefs/itkVectorCastImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/src && /usr/bin/c++ -DITKVideoCore_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Video/Core/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKVideoCore.dir/itkTemporalProcessObject.cxx.o -c /<>/Modules/Video/Core/src/itkTemporalProcessObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../lib/libITKVideoCore-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKStatistics.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKStatistics-4.12.so.1 -o ../../../../lib/libITKStatistics-4.12.so.1 CMakeFiles/ITKStatistics.dir/itkProbabilityDistribution.cxx.o CMakeFiles/ITKStatistics.dir/itkDenseFrequencyContainer2.cxx.o CMakeFiles/ITKStatistics.dir/itkSparseFrequencyContainer2.cxx.o CMakeFiles/ITKStatistics.dir/itkChiSquareDistribution.cxx.o CMakeFiles/ITKStatistics.dir/itkGaussianDistribution.cxx.o CMakeFiles/ITKStatistics.dir/itkTDistribution.cxx.o CMakeFiles/ITKStatistics.dir/itkNormalVariateGenerator.cxx.o CMakeFiles/ITKStatistics.dir/itkDecisionRule.cxx.o CMakeFiles/ITKStatistics.dir/itkMaximumDecisionRule.cxx.o CMakeFiles/ITKStatistics.dir/itkMaximumRatioDecisionRule.cxx.o CMakeFiles/ITKStatistics.dir/itkMinimumDecisionRule.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKStatistics make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsSwig.dir/build.make Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Statistics/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKStatistics /<>/BUILD/Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKStatisticsSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsSwig.dir/build.make Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../Typedefs/itkSample.i, ../../Typedefs/itkHistogram.i, ../../Typedefs/itkListSample.i, ../../Typedefs/itkMembershipFunctionBase.i, ../../Typedefs/itkDistanceMetric.i, ../../Typedefs/itkEuclideanDistanceMetric.i, ../../Typedefs/itkHistogramToEntropyImageFilter.i, ../../Typedefs/itkHistogramToIntensityImageFilter.i, ../../Typedefs/itkHistogramToLogProbabilityImageFilter.i, ../../Typedefs/itkHistogramToProbabilityImageFilter.i, ../../Typedefs/itkHistogramToRunLengthFeaturesFilter.i, ../../Typedefs/itkHistogramToTextureFeaturesFilter.i, ../../Typedefs/itkImageToHistogramFilter.i, ../../Typedefs/itkKdTree.i, ../../Typedefs/itkMaskedImageToHistogramFilter.i, ../../Typedefs/itkNormalVariateGenerator.i, ../../Typedefs/itkScalarImageToCooccurrenceMatrixFilter.i, ../../Typedefs/itkScalarImageToHistogramGenerator.i, ../../Typedefs/itkScalarImageToRunLengthFeaturesFilter.i, ../../Typedefs/itkScalarImageToRunLengthMatrixFilter.i, ../../Typedefs/itkScalarImageToTextureFeaturesFilter.i, ../../Typedefs/itkSampleSwigInterface.h, ../../Typedefs/itkHistogramSwigInterface.h, ../../Typedefs/itkListSampleSwigInterface.h, ../../Typedefs/itkMembershipFunctionBaseSwigInterface.h, ../../Typedefs/itkDistanceMetricSwigInterface.h, ../../Typedefs/itkEuclideanDistanceMetricSwigInterface.h, ../../Typedefs/itkHistogramToEntropyImageFilterSwigInterface.h, ../../Typedefs/itkHistogramToIntensityImageFilterSwigInterface.h, ../../Typedefs/itkHistogramToLogProbabilityImageFilterSwigInterface.h, ../../Typedefs/itkHistogramToProbabilityImageFilterSwigInterface.h, ../../Typedefs/itkHistogramToRunLengthFeaturesFilterSwigInterface.h, ../../Typedefs/itkHistogramToTextureFeaturesFilterSwigInterface.h, ../../Typedefs/itkImageToHistogramFilterSwigInterface.h, ../../Typedefs/itkKdTreeSwigInterface.h, ../../Typedefs/itkMaskedImageToHistogramFilterSwigInterface.h, ../../Typedefs/itkNormalVariateGeneratorSwigInterface.h, ../../Typedefs/itkScalarImageToCooccurrenceMatrixFilterSwigInterface.h, ../../Typedefs/itkScalarImageToHistogramGeneratorSwigInterface.h, ../../Typedefs/itkScalarImageToRunLengthFeaturesFilterSwigInterface.h, ../../Typedefs/itkScalarImageToRunLengthMatrixFilterSwigInterface.h, ../../Typedefs/itkScalarImageToTextureFeaturesFilterSwigInterface.h, ../../Typedefs/itkSample.idx, ../../Typedefs/itkHistogram.idx, ../../Typedefs/itkListSample.idx, ../../Typedefs/itkMembershipFunctionBase.idx, ../../Typedefs/itkDistanceMetric.idx, ../../Typedefs/itkEuclideanDistanceMetric.idx, ../../Typedefs/itkHistogramToEntropyImageFilter.idx, ../../Typedefs/itkHistogramToIntensityImageFilter.idx, ../../Typedefs/itkHistogramToLogProbabilityImageFilter.idx, ../../Typedefs/itkHistogramToProbabilityImageFilter.idx, ../../Typedefs/itkHistogramToRunLengthFeaturesFilter.idx, ../../Typedefs/itkHistogramToTextureFeaturesFilter.idx, ../../Typedefs/itkImageToHistogramFilter.idx, ../../Typedefs/itkKdTree.idx, ../../Typedefs/itkMaskedImageToHistogramFilter.idx, ../../Typedefs/itkNormalVariateGenerator.idx, ../../Typedefs/itkScalarImageToCooccurrenceMatrixFilter.idx, ../../Typedefs/itkScalarImageToHistogramGenerator.idx, ../../Typedefs/itkScalarImageToRunLengthFeaturesFilter.idx, ../../Typedefs/itkScalarImageToRunLengthMatrixFilter.idx, ../../Typedefs/itkScalarImageToTextureFeaturesFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVideoCore.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKVideoCore-4.12.so.1 -o ../../../../lib/libITKVideoCore-4.12.so.1 CMakeFiles/ITKVideoCore.dir/itkTemporalRegion.cxx.o CMakeFiles/ITKVideoCore.dir/itkTemporalDataObject.cxx.o CMakeFiles/ITKVideoCore.dir/itkTemporalProcessObject.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKVideoCore-4.12.so.1 ../../../../lib/libITKVideoCore-4.12.so.1 ../../../../lib/libITKVideoCore-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKVideoCore make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBaseSwig.dir/build.make Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBaseSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/ImageBase/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOImageBase /<>/BUILD/Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBaseSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOImageBaseSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBaseSwig.dir/build.make Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBaseSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../Typedefs/ITKIOImageBaseBase.i, ../../Typedefs/itkImageFileReader.i, ../../Typedefs/itkImageFileWriter.i, ../../Typedefs/itkImageSeriesReader.i, ../../Typedefs/itkImageSeriesWriter.i, ../../Typedefs/ITKIOImageBaseBaseSwigInterface.h, ../../Typedefs/itkImageFileReaderSwigInterface.h, ../../Typedefs/itkImageFileWriterSwigInterface.h, ../../Typedefs/itkImageSeriesReaderSwigInterface.h, ../../Typedefs/itkImageSeriesWriterSwigInterface.h, ../../Typedefs/ITKIOImageBaseBase.idx, ../../Typedefs/itkImageFileReader.idx, ../../Typedefs/itkImageFileWriter.idx, ../../Typedefs/itkImageSeriesReader.idx, ../../Typedefs/itkImageSeriesWriter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFiniteDifference && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKFiniteDifference.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkDenseFiniteDifferenceImageFilter;itkFiniteDifferenceFunction;itkFiniteDifferenceImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKFiniteDifferenceSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesSwig.dir/build.make Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageSources/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageSources /<>/BUILD/Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageSourcesSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesSwig.dir/build.make Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../Typedefs/itkGaborImageSource.i, ../../Typedefs/itkGaussianImageSource.i, ../../Typedefs/itkGenerateImageSource.i, ../../Typedefs/itkGridImageSource.i, ../../Typedefs/itkParametricImageSource.i, ../../Typedefs/itkPhysicalPointImageSource.i, ../../Typedefs/itkGaborImageSourceSwigInterface.h, ../../Typedefs/itkGaussianImageSourceSwigInterface.h, ../../Typedefs/itkGenerateImageSourceSwigInterface.h, ../../Typedefs/itkGridImageSourceSwigInterface.h, ../../Typedefs/itkParametricImageSourceSwigInterface.h, ../../Typedefs/itkPhysicalPointImageSourceSwigInterface.h, ../../Typedefs/itkGaborImageSource.idx, ../../Typedefs/itkGaussianImageSource.idx, ../../Typedefs/itkGenerateImageSource.idx, ../../Typedefs/itkGridImageSource.idx, ../../Typedefs/itkParametricImageSource.idx, ../../Typedefs/itkPhysicalPointImageSource.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFilterBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkBoxImageFilter;itkCastImageFilter;itkNoiseImageFilter;itkRecursiveSeparableImageFilter;itkVectorCastImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKImageFilterBaseSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapSwig.dir/build.make Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Colormap/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKColormap /<>/BUILD/Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKColormapSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapSwig.dir/build.make Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../Typedefs/itkColormapFunction.i, ../../Typedefs/itkCustomColormapFunction.i, ../../Typedefs/itkScalarToRGBColormapImageFilter.i, ../../Typedefs/itkColormapFunctionSwigInterface.h, ../../Typedefs/itkCustomColormapFunctionSwigInterface.h, ../../Typedefs/itkScalarToRGBColormapImageFilterSwigInterface.h, ../../Typedefs/itkColormapFunction.idx, ../../Typedefs/itkCustomColormapFunction.idx, ../../Typedefs/itkScalarToRGBColormapImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "ITKIOImageBaseBase;itkImageFileReader;itkImageFileWriter;itkImageSeriesReader;itkImageSeriesWriter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKIOImageBaseSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenSwig.dir/build.make Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Eigen/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKEigen /<>/BUILD/Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKEigenSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenSwig.dir/build.make Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../Typedefs/itkEigenAnalysis2DImageFilter.i, ../../Typedefs/itkEigenAnalysis2DImageFilterSwigInterface.h, ../../Typedefs/itkEigenAnalysis2DImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKEigen && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKEigen.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFilterBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkEigenAnalysis2DImageFilter make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKEigenSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLSwig.dir/build.make Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/IPL/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOIPL /<>/BUILD/Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOIPLSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLSwig.dir/build.make Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../Typedefs/itkIPLCommonImageIO.i, ../../Typedefs/itkIPLCommonImageIOSwigInterface.h, ../../Typedefs/itkIPLCommonImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKColormap && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKColormap.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkColormapFunction;itkCustomColormapFunction;itkScalarToRGBColormapImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKColormapSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5Swig.dir/build.make Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5Swig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/HDF5/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOHDF5 /<>/BUILD/Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5Swig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOHDF5Swig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5Swig.dir/build.make Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5Swig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../Typedefs/itkHDF5ImageIO.i, ../../Typedefs/itkHDF5ImageIOSwigInterface.h, ../../Typedefs/itkHDF5ImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOIPL && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOIPL.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkIPLCommonImageIO make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKIOIPLSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCSwig.dir/build.make Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/MRC/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOMRC /<>/BUILD/Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMRCSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCSwig.dir/build.make Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../Typedefs/itkMRCImageIO.i, ../../Typedefs/itkMRCImageIOSwigInterface.h, ../../Typedefs/itkMRCImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOHDF5 && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOHDF5.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkHDF5ImageIO make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKIOHDF5Swig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWSwig.dir/build.make Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/RAW/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIORAW /<>/BUILD/Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIORAWSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWSwig.dir/build.make Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../Typedefs/itkRawImageIO.i, ../../Typedefs/itkRawImageIOSwigInterface.h, ../../Typedefs/itkRawImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOMRC && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOMRC.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkMRCImageIO make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKIOMRCSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKSwig.dir/build.make Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Bridge/VTK/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKVTK /<>/BUILD/Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVTKSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKSwig.dir/build.make Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../Typedefs/itkVTKImageExport.i, ../../Typedefs/itkVTKImageImport.i, ../../Typedefs/itkVTKImageExportSwigInterface.h, ../../Typedefs/itkVTKImageImportSwigInterface.h, ../../Typedefs/itkVTKImageExport.idx, ../../Typedefs/itkVTKImageImport.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIORAW && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIORAW.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkRawImageIO make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKIORAWSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsSwig.dir/build.make Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Wrapping/Generators/Python/PyUtils /<>/BUILD /<>/BUILD/Wrapping/Generators/Python/PyUtils /<>/BUILD/Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPyUtilsSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsSwig.dir/build.make Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating ../../../Typedefs/itkPyCommand.i, ../../../Typedefs/itkPyImageFilter.i, ../../../Typedefs/itkPyCommandSwigInterface.h, ../../../Typedefs/itkPyImageFilterSwigInterface.h, ../../../Typedefs/itkPyCommand.idx, ../../../Typedefs/itkPyImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python/PyUtils && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKPyUtils.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkPyCommand;itkPyImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKPyUtilsSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Mesh/src/CMakeFiles/ITKMesh.dir/build.make Modules/Core/Mesh/src/CMakeFiles/ITKMesh.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Mesh/src /<>/BUILD /<>/BUILD/Modules/Core/Mesh/src /<>/BUILD/Modules/Core/Mesh/src/CMakeFiles/ITKMesh.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMesh make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Mesh/src/CMakeFiles/ITKMesh.dir/build.make Modules/Core/Mesh/src/CMakeFiles/ITKMesh.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Core/Mesh/src/CMakeFiles/ITKMesh.dir/itkMeshRegion.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/src && /usr/bin/c++ -DITKMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKMesh.dir/itkMeshRegion.cxx.o -c /<>/Modules/Core/Mesh/src/itkMeshRegion.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Core/Mesh/src/CMakeFiles/ITKMesh.dir/itkSimplexMeshGeometry.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/src && /usr/bin/c++ -DITKMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKMesh.dir/itkSimplexMeshGeometry.cxx.o -c /<>/Modules/Core/Mesh/src/itkSimplexMeshGeometry.cxx In file included from /<>/Modules/Core/Mesh/src/itkSimplexMeshGeometry.cxx:18: In file included from /<>/Modules/Core/Mesh/include/itkSimplexMeshGeometry.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../lib/libITKMesh-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKVTK && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKVTK.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkVTKImageExport;itkVTKImageImport" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKVTKSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/FiniteDifference/CMakeFiles/ITKFiniteDifference-all.dir/build.make Modules/Core/FiniteDifference/CMakeFiles/ITKFiniteDifference-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/FiniteDifference /<>/BUILD /<>/BUILD/Modules/Core/FiniteDifference /<>/BUILD/Modules/Core/FiniteDifference/CMakeFiles/ITKFiniteDifference-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFiniteDifference-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/FiniteDifference/CMakeFiles/ITKFiniteDifference-all.dir/build.make Modules/Core/FiniteDifference/CMakeFiles/ITKFiniteDifference-all.dir/build make[3]: Nothing to be done for 'Modules/Core/FiniteDifference/CMakeFiles/ITKFiniteDifference-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKFiniteDifference-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest1.dir/build.make Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKStatisticsHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMesh.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKMesh-4.12.so.1 -o ../../../../lib/libITKMesh-4.12.so.1 CMakeFiles/ITKMesh.dir/itkMeshRegion.cxx.o CMakeFiles/ITKMesh.dir/itkSimplexMeshGeometry.cxx.o ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKStatistics /<>/Modules/Numerics/Statistics /<>/BUILD/Modules/Numerics/Statistics 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKMesh-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Statistics /<>/BUILD /<>/BUILD/Modules/Numerics/Statistics /<>/BUILD/Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKStatisticsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest1.dir/build.make Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest1.dir/build make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKMesh make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/src && /usr/bin/c++ -DITKIOImageBase_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOImageBase.dir/itkImageIOFactory.cxx.o -c /<>/Modules/IO/ImageBase/src/itkImageIOFactory.cxx In file included from /<>/Modules/IO/ImageBase/src/itkImageIOFactory.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOFactory.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/src && /usr/bin/c++ -DITKIOImageBase_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOImageBase.dir/itkIOCommon.cxx.o -c /<>/Modules/IO/ImageBase/src/itkIOCommon.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/src && /usr/bin/c++ -DITKIOImageBase_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOImageBase.dir/itkNumericSeriesFileNames.cxx.o -c /<>/Modules/IO/ImageBase/src/itkNumericSeriesFileNames.cxx make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest2.dir/build.make Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkImageIOBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkRegularExpressionSeriesFileNames.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/IO/TransformFactory/src/CMakeFiles/ITKTransformFactory.dir/itkTransformFactoryBaseRegisterDoubleParameters.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest1.dir/test/ITKStatisticsHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKStatisticsHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKStatistics /<>/Modules/Numerics/Statistics /<>/BUILD/Modules/Numerics/Statistics 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Statistics /<>/BUILD /<>/BUILD/Modules/Numerics/Statistics /<>/BUILD/Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKStatisticsHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest2.dir/build.make Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest2.dir/test/ITKStatisticsHeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics && /usr/bin/c++ -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsHeaderTest1.dir/test/ITKStatisticsHeaderTest1.cxx.o -c /<>/BUILD/Modules/Numerics/Statistics/test/ITKStatisticsHeaderTest1.cxx In file included from /<>/BUILD/Modules/Numerics/Statistics/test/ITKStatisticsHeaderTest1.cxx:23: In file included from /<>/Modules/Numerics/Statistics/include/itkManhattanDistanceMetric.hxx:21: In file included from /<>/Modules/Numerics/Statistics/include/itkManhattanDistanceMetric.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkDistanceMetric.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKStatisticsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKStatisticsHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKStatisticsHeaderTest1.dir/test/ITKStatisticsHeaderTest1.cxx.o -o ../../../bin/ITKStatisticsHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKStatisticsHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest3.dir/build.make Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest3.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKStatisticsHeaderTest3.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKStatistics /<>/Modules/Numerics/Statistics /<>/BUILD/Modules/Numerics/Statistics 35 3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Statistics /<>/BUILD /<>/BUILD/Modules/Numerics/Statistics /<>/BUILD/Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest3.dir/DependInfo.cmake --color= Scanning dependencies of target ITKStatisticsHeaderTest3 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest3.dir/build.make Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest3.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Statistics/CMakeFiles/ITKStatisticsHeaderTest3.dir/test/ITKStatisticsHeaderTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/src && /usr/bin/c++ -DITKIOImageBase_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOImageBase.dir/itkRegularExpressionSeriesFileNames.cxx.o -c /<>/Modules/IO/ImageBase/src/itkRegularExpressionSeriesFileNames.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/IO/ImageBase/src/CMakeFiles/ITKIOImageBase.dir/itkStreamingImageIOBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics && /usr/bin/c++ -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsHeaderTest2.dir/test/ITKStatisticsHeaderTest2.cxx.o -c /<>/BUILD/Modules/Numerics/Statistics/test/ITKStatisticsHeaderTest2.cxx In file included from /<>/BUILD/Modules/Numerics/Statistics/test/ITKStatisticsHeaderTest2.cxx:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSubsamplerBase.hxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkSubsamplerBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKStatisticsHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKStatisticsHeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKStatisticsHeaderTest2.dir/test/ITKStatisticsHeaderTest2.cxx.o -o ../../../bin/ITKStatisticsHeaderTest2 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKStatisticsHeaderTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/ImageFunction/CMakeFiles/ITKImageFunctionHeaderTest1.dir/build.make Modules/Core/ImageFunction/CMakeFiles/ITKImageFunctionHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKImageFunctionHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageFunction /<>/Modules/Core/ImageFunction /<>/BUILD/Modules/Core/ImageFunction 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/ImageFunction /<>/BUILD /<>/BUILD/Modules/Core/ImageFunction /<>/BUILD/Modules/Core/ImageFunction/CMakeFiles/ITKImageFunctionHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFunctionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/ImageFunction/CMakeFiles/ITKImageFunctionHeaderTest1.dir/build.make Modules/Core/ImageFunction/CMakeFiles/ITKImageFunctionHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Core/ImageFunction/CMakeFiles/ITKImageFunctionHeaderTest1.dir/test/ITKImageFunctionHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics && /usr/bin/c++ -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsHeaderTest3.dir/test/ITKStatisticsHeaderTest3.cxx.o -c /<>/BUILD/Modules/Numerics/Statistics/test/ITKStatisticsHeaderTest3.cxx In file included from /<>/BUILD/Modules/Numerics/Statistics/test/ITKStatisticsHeaderTest3.cxx:23: In file included from /<>/Modules/Numerics/Statistics/include/itkStandardDeviationPerComponentSampleFilter.hxx:21: In file included from /<>/Modules/Numerics/Statistics/include/itkStandardDeviationPerComponentSampleFilter.h:23: In file included from /<>/Modules/Core/Common/include/itkVariableSizeMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKStatisticsHeaderTest3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKStatisticsHeaderTest3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKStatisticsHeaderTest3.dir/test/ITKStatisticsHeaderTest3.cxx.o -o ../../../bin/ITKStatisticsHeaderTest3 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKStatisticsHeaderTest3 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageGrid/CMakeFiles/ITKImageGridHeaderTest1.dir/build.make Modules/Filtering/ImageGrid/CMakeFiles/ITKImageGridHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKImageGridHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/src && /usr/bin/c++ -DITKIOImageBase_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOImageBase.dir/itkImageIOBase.cxx.o -c /<>/Modules/IO/ImageBase/src/itkImageIOBase.cxx In file included from /<>/Modules/IO/ImageBase/src/itkImageIOBase.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/AnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingHeaderTest1.dir/build.make Modules/Filtering/AnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKAnisotropicSmoothingHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageGrid /<>/Modules/Filtering/ImageGrid /<>/BUILD/Modules/Filtering/ImageGrid 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AnisotropicSmoothing && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKAnisotropicSmoothing /<>/Modules/Filtering/AnisotropicSmoothing /<>/BUILD/Modules/Filtering/AnisotropicSmoothing 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageGrid /<>/BUILD /<>/BUILD/Modules/Filtering/ImageGrid /<>/BUILD/Modules/Filtering/ImageGrid/CMakeFiles/ITKImageGridHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageGridHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageGrid/CMakeFiles/ITKImageGridHeaderTest1.dir/build.make Modules/Filtering/ImageGrid/CMakeFiles/ITKImageGridHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/AnisotropicSmoothing /<>/BUILD /<>/BUILD/Modules/Filtering/AnisotropicSmoothing /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAnisotropicSmoothingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/AnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingHeaderTest1.dir/build.make Modules/Filtering/AnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/AnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingHeaderTest1.dir/test/ITKAnisotropicSmoothingHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/ImageGrid/CMakeFiles/ITKImageGridHeaderTest1.dir/test/ITKImageGridHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageSources.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkGaborImageSource;itkGaussianImageSource;itkGenerateImageSource;itkGridImageSource;itkParametricImageSource;itkPhysicalPointImageSource" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction && /usr/bin/c++ -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionHeaderTest1.dir/test/ITKImageFunctionHeaderTest1.cxx.o -c /<>/BUILD/Modules/Core/ImageFunction/test/ITKImageFunctionHeaderTest1.cxx In file included from /<>/BUILD/Modules/Core/ImageFunction/test/ITKImageFunctionHeaderTest1.cxx:23: In file included from /<>/Modules/Core/ImageFunction/include/itkLinearInterpolateImageFunction.hxx:22: In file included from /<>/Modules/Core/ImageFunction/include/itkLinearInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKImageFunctionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageFunctionHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageFunctionHeaderTest1.dir/test/ITKImageFunctionHeaderTest1.cxx.o -o ../../../bin/ITKImageFunctionHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKImageFunctionHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/LabelMap/src/CMakeFiles/ITKLabelMap.dir/build.make Modules/Filtering/LabelMap/src/CMakeFiles/ITKLabelMap.dir/depend make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKImageSourcesSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Mesh/CMakeFiles/ITKMeshHeaderTest1.dir/build.make Modules/Core/Mesh/CMakeFiles/ITKMeshHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/src && /usr/bin/c++ -DITKIOImageBase_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOImageBase.dir/itkStreamingImageIOBase.cxx.o -c /<>/Modules/IO/ImageBase/src/itkStreamingImageIOBase.cxx In file included from /<>/Modules/IO/ImageBase/src/itkStreamingImageIOBase.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkStreamingImageIOBase.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/LabelMap/src /<>/BUILD /<>/BUILD/Modules/Filtering/LabelMap/src /<>/BUILD/Modules/Filtering/LabelMap/src/CMakeFiles/ITKLabelMap.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelMap make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/LabelMap/src/CMakeFiles/ITKLabelMap.dir/build.make Modules/Filtering/LabelMap/src/CMakeFiles/ITKLabelMap.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKMeshHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKMesh /<>/Modules/Core/Mesh /<>/BUILD/Modules/Core/Mesh 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../lib/libITKIOImageBase-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/LabelMap/src/CMakeFiles/ITKLabelMap.dir/itkGeometryUtilities.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Mesh /<>/BUILD /<>/BUILD/Modules/Core/Mesh /<>/BUILD/Modules/Core/Mesh/CMakeFiles/ITKMeshHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMeshHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Mesh/CMakeFiles/ITKMeshHeaderTest1.dir/build.make Modules/Core/Mesh/CMakeFiles/ITKMeshHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Core/Mesh/CMakeFiles/ITKMeshHeaderTest1.dir/test/ITKMeshHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOImageBase.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOImageBase-4.12.so.1 -o ../../../../lib/libITKIOImageBase-4.12.so.1 CMakeFiles/ITKIOImageBase.dir/itkImageSeriesWriter.cxx.o CMakeFiles/ITKIOImageBase.dir/itkImageFileReaderException.cxx.o CMakeFiles/ITKIOImageBase.dir/itkImageFileWriter.cxx.o CMakeFiles/ITKIOImageBase.dir/itkArchetypeSeriesFileNames.cxx.o CMakeFiles/ITKIOImageBase.dir/itkImageIOFactory.cxx.o CMakeFiles/ITKIOImageBase.dir/itkIOCommon.cxx.o CMakeFiles/ITKIOImageBase.dir/itkNumericSeriesFileNames.cxx.o CMakeFiles/ITKIOImageBase.dir/itkImageIOBase.cxx.o CMakeFiles/ITKIOImageBase.dir/itkRegularExpressionSeriesFileNames.cxx.o CMakeFiles/ITKIOImageBase.dir/itkStreamingImageIOBase.cxx.o ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKIOImageBase make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/QuadEdgeMesh/src/CMakeFiles/ITKQuadEdgeMesh.dir/build.make Modules/Core/QuadEdgeMesh/src/CMakeFiles/ITKQuadEdgeMesh.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/QuadEdgeMesh/src /<>/BUILD /<>/BUILD/Modules/Core/QuadEdgeMesh/src /<>/BUILD/Modules/Core/QuadEdgeMesh/src/CMakeFiles/ITKQuadEdgeMesh.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMesh make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/QuadEdgeMesh/src/CMakeFiles/ITKQuadEdgeMesh.dir/build.make Modules/Core/QuadEdgeMesh/src/CMakeFiles/ITKQuadEdgeMesh.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Core/QuadEdgeMesh/src/CMakeFiles/ITKQuadEdgeMesh.dir/itkQuadEdge.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AnisotropicSmoothing && /usr/bin/c++ -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKAnisotropicSmoothingHeaderTest1.dir/test/ITKAnisotropicSmoothingHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test/ITKAnisotropicSmoothingHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test/ITKAnisotropicSmoothingHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkVectorCurvatureNDAnisotropicDiffusionFunction.hxx:21: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkVectorCurvatureNDAnisotropicDiffusionFunction.h:21: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkVectorAnisotropicDiffusionFunction.h:21: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkAnisotropicDiffusionFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKAnisotropicSmoothingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AnisotropicSmoothing && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKAnisotropicSmoothingHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKAnisotropicSmoothingHeaderTest1.dir/test/ITKAnisotropicSmoothingHeaderTest1.cxx.o -o ../../../bin/ITKAnisotropicSmoothingHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKAnisotropicSmoothingHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Smoothing/CMakeFiles/ITKSmoothingHeaderTest1.dir/build.make Modules/Filtering/Smoothing/CMakeFiles/ITKSmoothingHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKSmoothingHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKSmoothing /<>/Modules/Filtering/Smoothing /<>/BUILD/Modules/Filtering/Smoothing 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Smoothing /<>/BUILD /<>/BUILD/Modules/Filtering/Smoothing /<>/BUILD/Modules/Filtering/Smoothing/CMakeFiles/ITKSmoothingHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSmoothingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Smoothing/CMakeFiles/ITKSmoothingHeaderTest1.dir/build.make Modules/Filtering/Smoothing/CMakeFiles/ITKSmoothingHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/Smoothing/CMakeFiles/ITKSmoothingHeaderTest1.dir/test/ITKSmoothingHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/src && /usr/bin/c++ -DITKQuadEdgeMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKQuadEdgeMesh.dir/itkQuadEdge.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/src/itkQuadEdge.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../lib/libITKQuadEdgeMesh-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKQuadEdgeMesh.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKQuadEdgeMesh-4.12.so.1 -o ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 CMakeFiles/ITKQuadEdgeMesh.dir/itkQuadEdge.cxx.o ../../../../lib/libITKMesh-4.12.so.1 -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKQuadEdgeMesh make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/build.make Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/src && /usr/bin/c++ -DITKLabelMap_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKLabelMap.dir/itkGeometryUtilities.cxx.o -c /<>/Modules/Filtering/LabelMap/src/itkGeometryUtilities.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX shared library ../../../../lib/libITKLabelMap-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizers/src /<>/BUILD /<>/BUILD/Modules/Numerics/Optimizers/src /<>/BUILD/Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizers make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/build.make Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkNonLinearOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid && /usr/bin/c++ -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridHeaderTest1.dir/test/ITKImageGridHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/ImageGrid/test/ITKImageGridHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/ImageGrid/test/ITKImageGridHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/ImageGrid/include/itkResampleImageFilter.hxx:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkResampleImageFilter.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKImageGridHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLabelMap.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKLabelMap-4.12.so.1 -o ../../../../lib/libITKLabelMap-4.12.so.1 CMakeFiles/ITKLabelMap.dir/itkGeometryUtilities.cxx.o ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKLabelMap-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKLabelMap make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/SignedDistanceFunction/CMakeFiles/ITKSignedDistanceFunctionHeaderTest1.dir/build.make Modules/Segmentation/SignedDistanceFunction/CMakeFiles/ITKSignedDistanceFunctionHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKSignedDistanceFunctionHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/SignedDistanceFunction && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKSignedDistanceFunction /<>/Modules/Segmentation/SignedDistanceFunction /<>/BUILD/Modules/Segmentation/SignedDistanceFunction 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageGridHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageGridHeaderTest1.dir/test/ITKImageGridHeaderTest1.cxx.o -o ../../../bin/ITKImageGridHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKImageGridHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Polynomials/CMakeFiles/ITKPolynomialsHeaderTest1.dir/build.make Modules/Numerics/Polynomials/CMakeFiles/ITKPolynomialsHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/SignedDistanceFunction /<>/BUILD /<>/BUILD/Modules/Segmentation/SignedDistanceFunction /<>/BUILD/Modules/Segmentation/SignedDistanceFunction/CMakeFiles/ITKSignedDistanceFunctionHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSignedDistanceFunctionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/SignedDistanceFunction/CMakeFiles/ITKSignedDistanceFunctionHeaderTest1.dir/build.make Modules/Segmentation/SignedDistanceFunction/CMakeFiles/ITKSignedDistanceFunctionHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKPolynomialsHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Polynomials && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKPolynomials /<>/Modules/Numerics/Polynomials /<>/BUILD/Modules/Numerics/Polynomials 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Segmentation/SignedDistanceFunction/CMakeFiles/ITKSignedDistanceFunctionHeaderTest1.dir/test/ITKSignedDistanceFunctionHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Polynomials /<>/BUILD /<>/BUILD/Modules/Numerics/Polynomials /<>/BUILD/Modules/Numerics/Polynomials/CMakeFiles/ITKPolynomialsHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPolynomialsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Polynomials/CMakeFiles/ITKPolynomialsHeaderTest1.dir/build.make Modules/Numerics/Polynomials/CMakeFiles/ITKPolynomialsHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Polynomials/CMakeFiles/ITKPolynomialsHeaderTest1.dir/test/ITKPolynomialsHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/Mesh/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshHeaderTest1.dir/test/ITKMeshHeaderTest1.cxx.o -c /<>/BUILD/Modules/Core/Mesh/test/ITKMeshHeaderTest1.cxx In file included from /<>/BUILD/Modules/Core/Mesh/test/ITKMeshHeaderTest1.cxx:23: In file included from /<>/Modules/Core/Mesh/include/itkSphereMeshSource.hxx:22: In file included from /<>/Modules/Core/Mesh/include/itkSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Linking CXX executable ../../../bin/ITKMeshHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMeshHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKMeshHeaderTest1.dir/test/ITKMeshHeaderTest1.cxx.o -o ../../../bin/ITKMeshHeaderTest1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 34%] Built target ITKMeshHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BiasCorrection/CMakeFiles/ITKBiasCorrectionHeaderTest1.dir/build.make Modules/Filtering/BiasCorrection/CMakeFiles/ITKBiasCorrectionHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 34%] Generating test/ITKBiasCorrectionHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BiasCorrection && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKBiasCorrection /<>/Modules/Filtering/BiasCorrection /<>/BUILD/Modules/Filtering/BiasCorrection 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BiasCorrection /<>/BUILD /<>/BUILD/Modules/Filtering/BiasCorrection /<>/BUILD/Modules/Filtering/BiasCorrection/CMakeFiles/ITKBiasCorrectionHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBiasCorrectionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BiasCorrection/CMakeFiles/ITKBiasCorrectionHeaderTest1.dir/build.make Modules/Filtering/BiasCorrection/CMakeFiles/ITKBiasCorrectionHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Filtering/BiasCorrection/CMakeFiles/ITKBiasCorrectionHeaderTest1.dir/test/ITKBiasCorrectionHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkNonLinearOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkNonLinearOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 34%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkMultipleValuedCostFunction.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Polynomials && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPolynomialsHeaderTest1.dir/test/ITKPolynomialsHeaderTest1.cxx.o -c /<>/BUILD/Modules/Numerics/Polynomials/test/ITKPolynomialsHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKPolynomialsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Polynomials && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKPolynomialsHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKPolynomialsHeaderTest1.dir/test/ITKPolynomialsHeaderTest1.cxx.o -o ../../../bin/ITKPolynomialsHeaderTest1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingHeaderTest1.dir/test/ITKSmoothingHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/Smoothing/test/ITKSmoothingHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/Smoothing/test/ITKSmoothingHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/Smoothing/include/itkDiscreteGaussianImageFilter.hxx:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkDiscreteGaussianImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKPolynomialsHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/build.make Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKSmoothingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/BioCell/src /<>/BUILD /<>/BUILD/Modules/Segmentation/BioCell/src /<>/BUILD/Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBioCell make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/build.make Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/itkBioGenome.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKSmoothingHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKSmoothingHeaderTest1.dir/test/ITKSmoothingHeaderTest1.cxx.o -o ../../../bin/ITKSmoothingHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKSmoothingHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FFT/CMakeFiles/ITKFFTHeaderTest1.dir/build.make Modules/Filtering/FFT/CMakeFiles/ITKFFTHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKFFTHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKFFT /<>/Modules/Filtering/FFT /<>/BUILD/Modules/Filtering/FFT 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FFT /<>/BUILD /<>/BUILD/Modules/Filtering/FFT /<>/BUILD/Modules/Filtering/FFT/CMakeFiles/ITKFFTHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFFTHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FFT/CMakeFiles/ITKFFTHeaderTest1.dir/build.make Modules/Filtering/FFT/CMakeFiles/ITKFFTHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Filtering/FFT/CMakeFiles/ITKFFTHeaderTest1.dir/test/ITKFFTHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/SignedDistanceFunction && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSignedDistanceFunctionHeaderTest1.dir/test/ITKSignedDistanceFunctionHeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/SignedDistanceFunction/test/ITKSignedDistanceFunctionHeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/SignedDistanceFunction/test/ITKSignedDistanceFunctionHeaderTest1.cxx:23: In file included from /<>/Modules/Segmentation/SignedDistanceFunction/include/itkSphereSignedDistanceFunction.hxx:21: In file included from /<>/Modules/Segmentation/SignedDistanceFunction/include/itkSphereSignedDistanceFunction.h:21: In file included from /<>/Modules/Segmentation/SignedDistanceFunction/include/itkShapeSignedDistanceFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKSignedDistanceFunctionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/SignedDistanceFunction && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKSignedDistanceFunctionHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKSignedDistanceFunctionHeaderTest1.dir/test/ITKSignedDistanceFunctionHeaderTest1.cxx.o -o ../../../bin/ITKSignedDistanceFunctionHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKSignedDistanceFunctionHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/BioRad/src/CMakeFiles/ITKIOBioRad.dir/build.make Modules/IO/BioRad/src/CMakeFiles/ITKIOBioRad.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BioRad/src /<>/BUILD /<>/BUILD/Modules/IO/BioRad/src /<>/BUILD/Modules/IO/BioRad/src/CMakeFiles/ITKIOBioRad.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBioRad make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/BioRad/src/CMakeFiles/ITKIOBioRad.dir/build.make Modules/IO/BioRad/src/CMakeFiles/ITKIOBioRad.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/BioRad/src/CMakeFiles/ITKIOBioRad.dir/itkBioRadImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkMultipleValuedCostFunction.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkMultipleValuedCostFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkSingleValuedCostFunction.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/src && /usr/bin/c++ -DITKBioCell_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKBioCell.dir/itkBioGenome.cxx.o -c /<>/Modules/Segmentation/BioCell/src/itkBioGenome.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/itkBioGene.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BiasCorrection && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBiasCorrectionHeaderTest1.dir/test/ITKBiasCorrectionHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/BiasCorrection/test/ITKBiasCorrectionHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/BiasCorrection/test/ITKBiasCorrectionHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/BiasCorrection/include/itkMRIBiasFieldCorrectionFilter.hxx:21: In file included from /<>/Modules/Filtering/BiasCorrection/include/itkMRIBiasFieldCorrectionFilter.h:23: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKBiasCorrectionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BiasCorrection && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKBiasCorrectionHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKBiasCorrectionHeaderTest1.dir/test/ITKBiasCorrectionHeaderTest1.cxx.o -o ../../../bin/ITKBiasCorrectionHeaderTest1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKBiasCorrectionHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkConjugateGradientOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTHeaderTest1.dir/test/ITKFFTHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/FFT/test/ITKFFTHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/FFT/test/ITKFFTHeaderTest1.cxx:24: In file included from /<>/Modules/Filtering/FFT/include/itkVnlHalfHermitianToRealInverseFFTImageFilter.hxx:21: In file included from /<>/Modules/Filtering/FFT/include/itkHalfHermitianToRealInverseFFTImageFilter.hxx:21: In file included from /<>/Modules/Filtering/FFT/include/itkVnlHalfHermitianToRealInverseFFTImageFilter.h:21: In file included from /<>/Modules/Filtering/FFT/include/itkHalfHermitianToRealInverseFFTImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkSingleValuedCostFunction.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkSingleValuedCostFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKFFTHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkRegularStepGradientDescentOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFFTHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKFFTHeaderTest1.dir/test/ITKFFTHeaderTest1.cxx.o -o ../../../bin/ITKFFTHeaderTest1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BioRad/src && /usr/bin/c++ -DITKIOBioRad_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOBioRad.dir/itkBioRadImageIOFactory.cxx.o -c /<>/Modules/IO/BioRad/src/itkBioRadImageIOFactory.cxx In file included from /<>/Modules/IO/BioRad/src/itkBioRadImageIOFactory.cxx:28: In file included from /<>/Modules/IO/BioRad/include/itkBioRadImageIOFactory.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/BioRad/src/CMakeFiles/ITKIOBioRad.dir/itkBioRadImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/src && /usr/bin/c++ -DITKBioCell_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKBioCell.dir/itkBioGene.cxx.o -c /<>/Modules/Segmentation/BioCell/src/itkBioGene.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/itkBioGeneNetwork.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkConjugateGradientOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkConjugateGradientOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkLBFGSOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/src && /usr/bin/c++ -DITKBioCell_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKBioCell.dir/itkBioGeneNetwork.cxx.o -c /<>/Modules/Segmentation/BioCell/src/itkBioGeneNetwork.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/itkBioCellBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkRegularStepGradientDescentOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkRegularStepGradientDescentOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkExhaustiveOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BioRad/src && /usr/bin/c++ -DITKIOBioRad_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOBioRad.dir/itkBioRadImageIO.cxx.o -c /<>/Modules/IO/BioRad/src/itkBioRadImageIO.cxx In file included from /<>/Modules/IO/BioRad/src/itkBioRadImageIO.cxx:28: In file included from /<>/Modules/IO/BioRad/include/itkBioRadImageIO.h:32: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOBioRad-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BioRad/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOBioRad.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOBioRad-4.12.so.1 -o ../../../../lib/libITKIOBioRad-4.12.so.1 CMakeFiles/ITKIOBioRad.dir/itkBioRadImageIOFactory.cxx.o CMakeFiles/ITKIOBioRad.dir/itkBioRadImageIO.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BioRad/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOBioRad-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/src && /usr/bin/c++ -DITKBioCell_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKBioCell.dir/itkBioCellBase.cxx.o -c /<>/Modules/Segmentation/BioCell/src/itkBioCellBase.cxx In file included from /<>/Modules/Segmentation/BioCell/src/itkBioCellBase.cxx:18: In file included from /<>/Modules/Segmentation/BioCell/include/itkBioCellBase.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Segmentation/BioCell/src/CMakeFiles/ITKBioCell.dir/itkBioCellularAggregateBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkLBFGSOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkLBFGSOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkLevenbergMarquardtOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkExhaustiveOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkExhaustiveOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkSingleValuedNonLinearVnlOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKStatistics.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkSample;itkHistogram;itkListSample;itkMembershipFunctionBase;itkDistanceMetric;itkEuclideanDistanceMetric;itkHistogramToEntropyImageFilter;itkHistogramToIntensityImageFilter;itkHistogramToLogProbabilityImageFilter;itkHistogramToProbabilityImageFilter;itkHistogramToRunLengthFeaturesFilter;itkHistogramToTextureFeaturesFilter;itkImageToHistogramFilter;itkKdTree;itkMaskedImageToHistogramFilter;itkNormalVariateGenerator;itkScalarImageToCooccurrenceMatrixFilter;itkScalarImageToHistogramGenerator;itkScalarImageToRunLengthFeaturesFilter;itkScalarImageToRunLengthMatrixFilter;itkScalarImageToTextureFeaturesFilter" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/src && /usr/bin/c++ -DITKBioCell_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKBioCell.dir/itkBioCellularAggregateBase.cxx.o -c /<>/Modules/Segmentation/BioCell/src/itkBioCellularAggregateBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKBioCell-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKBioCell.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKBioCell-4.12.so.1 -o ../../../../lib/libITKBioCell-4.12.so.1 CMakeFiles/ITKBioCell.dir/itkBioGenome.cxx.o CMakeFiles/ITKBioCell.dir/itkBioGene.cxx.o CMakeFiles/ITKBioCell.dir/itkBioGeneNetwork.cxx.o CMakeFiles/ITKBioCell.dir/itkBioCellBase.cxx.o CMakeFiles/ITKBioCell.dir/itkBioCellularAggregateBase.cxx.o ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKBioCell-4.12.so.1 ../../../../lib/libITKBioCell-4.12.so.1 ../../../../lib/libITKBioCell-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkSingleValuedNonLinearVnlOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkSingleValuedNonLinearVnlOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkQuaternionRigidTransformGradientDescentOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkLevenbergMarquardtOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkLevenbergMarquardtOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkSPSAOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkQuaternionRigidTransformGradientDescentOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkQuaternionRigidTransformGradientDescentOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkSingleValuedVnlCostFunctionAdaptor.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkSPSAOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkSPSAOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkMultipleValuedNonLinearVnlOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkSingleValuedVnlCostFunctionAdaptor.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkSingleValuedVnlCostFunctionAdaptor.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkPowellOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkMultipleValuedNonLinearVnlOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkMultipleValuedNonLinearVnlOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkVersorRigid3DTransformOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkPowellOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkPowellOptimizer.cxx In file included from /<>/Modules/Numerics/Optimizers/src/itkPowellOptimizer.cxx:21: In file included from /<>/Modules/Numerics/Optimizers/include/itkPowellOptimizer.h:22: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkVersorTransformOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkVersorRigid3DTransformOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkVersorRigid3DTransformOptimizer.cxx In file included from /<>/Modules/Numerics/Optimizers/src/itkVersorRigid3DTransformOptimizer.cxx:21: In file included from /<>/Modules/Numerics/Optimizers/include/itkVersorRigid3DTransformOptimizer.h:22: In file included from /<>/Modules/Core/Common/include/itkVersor.h:21: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkOnePlusOneEvolutionaryOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkVersorTransformOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkVersorTransformOptimizer.cxx In file included from /<>/Modules/Numerics/Optimizers/src/itkVersorTransformOptimizer.cxx:21: In file included from /<>/Modules/Numerics/Optimizers/include/itkVersorTransformOptimizer.h:22: In file included from /<>/Modules/Core/Common/include/itkVersor.h:21: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkMultipleValuedNonLinearOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkMultipleValuedNonLinearOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkMultipleValuedNonLinearOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkLBFGSBOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkOnePlusOneEvolutionaryOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkOnePlusOneEvolutionaryOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkCumulativeGaussianOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkLBFGSBOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkLBFGSBOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkAmoebaOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkCumulativeGaussianOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkCumulativeGaussianOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkCumulativeGaussianCostFunction.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkCumulativeGaussianCostFunction.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkCumulativeGaussianCostFunction.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkAmoebaOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkAmoebaOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkFRPROptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkGradientDescentOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkFRPROptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkFRPROptimizer.cxx In file included from /<>/Modules/Numerics/Optimizers/src/itkFRPROptimizer.cxx:21: In file included from /<>/Modules/Numerics/Optimizers/include/itkFRPROptimizer.h:21: In file included from /<>/Modules/Numerics/Optimizers/include/itkPowellOptimizer.h:22: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkSingleValuedNonLinearOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkGradientDescentOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkGradientDescentOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkRegularStepGradientDescentBaseOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkSingleValuedNonLinearOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkSingleValuedNonLinearOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkMultipleValuedVnlCostFunctionAdaptor.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkRegularStepGradientDescentBaseOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkRegularStepGradientDescentBaseOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkParticleSwarmOptimizerBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkMultipleValuedVnlCostFunctionAdaptor.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkMultipleValuedVnlCostFunctionAdaptor.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkParticleSwarmOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkParticleSwarmOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkParticleSwarmOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/src/CMakeFiles/ITKOptimizers.dir/itkInitializationBiasedParticleSwarmOptimizer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkParticleSwarmOptimizerBase.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkParticleSwarmOptimizerBase.cxx make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Stimulate/src/CMakeFiles/ITKIOStimulate.dir/build.make Modules/IO/Stimulate/src/CMakeFiles/ITKIOStimulate.dir/depend make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKStatisticsSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/CSV/src/CMakeFiles/ITKIOCSV.dir/build.make Modules/IO/CSV/src/CMakeFiles/ITKIOCSV.dir/depend make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKBioCell make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/IPL/src/CMakeFiles/ITKIOIPL.dir/build.make Modules/IO/IPL/src/CMakeFiles/ITKIOIPL.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Stimulate/src /<>/BUILD /<>/BUILD/Modules/IO/Stimulate/src /<>/BUILD/Modules/IO/Stimulate/src/CMakeFiles/ITKIOStimulate.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOStimulate make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKFFTHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Stimulate/src/CMakeFiles/ITKIOStimulate.dir/build.make Modules/IO/Stimulate/src/CMakeFiles/ITKIOStimulate.dir/build make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOBioRad make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/HDF5/src/CMakeFiles/ITKIOHDF5.dir/build.make Modules/IO/HDF5/src/CMakeFiles/ITKIOHDF5.dir/depend make -f Modules/IO/MRC/src/CMakeFiles/ITKIOMRC.dir/build.make Modules/IO/MRC/src/CMakeFiles/ITKIOMRC.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/CSV/src /<>/BUILD /<>/BUILD/Modules/IO/CSV/src /<>/BUILD/Modules/IO/CSV/src/CMakeFiles/ITKIOCSV.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOCSV make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/CSV/src/CMakeFiles/ITKIOCSV.dir/build.make Modules/IO/CSV/src/CMakeFiles/ITKIOCSV.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Stimulate/src/CMakeFiles/ITKIOStimulate.dir/itkStimulateImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/CSV/src/CMakeFiles/ITKIOCSV.dir/itkCSVFileReaderBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/IPL/src /<>/BUILD /<>/BUILD/Modules/IO/IPL/src /<>/BUILD/Modules/IO/IPL/src/CMakeFiles/ITKIOIPL.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOIPL make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/IPL/src/CMakeFiles/ITKIOIPL.dir/build.make Modules/IO/IPL/src/CMakeFiles/ITKIOIPL.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/MRC/src /<>/BUILD /<>/BUILD/Modules/IO/MRC/src /<>/BUILD/Modules/IO/MRC/src/CMakeFiles/ITKIOMRC.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMRC make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/MRC/src/CMakeFiles/ITKIOMRC.dir/build.make Modules/IO/MRC/src/CMakeFiles/ITKIOMRC.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/HDF5/src /<>/BUILD /<>/BUILD/Modules/IO/HDF5/src /<>/BUILD/Modules/IO/HDF5/src/CMakeFiles/ITKIOHDF5.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOHDF5 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/HDF5/src/CMakeFiles/ITKIOHDF5.dir/build.make Modules/IO/HDF5/src/CMakeFiles/ITKIOHDF5.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/IPL/src/CMakeFiles/ITKIOIPL.dir/itkIPLCommonImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/MRC/src/CMakeFiles/ITKIOMRC.dir/itkMRCHeaderObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/HDF5/src/CMakeFiles/ITKIOHDF5.dir/itkHDF5ImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/c++ -DITKOptimizers_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizers.dir/itkInitializationBiasedParticleSwarmOptimizer.cxx.o -c /<>/Modules/Numerics/Optimizers/src/itkInitializationBiasedParticleSwarmOptimizer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKOptimizers-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKOptimizers.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKOptimizers-4.12.so.1 -o ../../../../lib/libITKOptimizers-4.12.so.1 CMakeFiles/ITKOptimizers.dir/itkNonLinearOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkMultipleValuedCostFunction.cxx.o CMakeFiles/ITKOptimizers.dir/itkSingleValuedCostFunction.cxx.o CMakeFiles/ITKOptimizers.dir/itkConjugateGradientOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkRegularStepGradientDescentOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkLBFGSOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkExhaustiveOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkLevenbergMarquardtOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkSingleValuedNonLinearVnlOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkQuaternionRigidTransformGradientDescentOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkSPSAOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkSingleValuedVnlCostFunctionAdaptor.cxx.o CMakeFiles/ITKOptimizers.dir/itkMultipleValuedNonLinearVnlOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkPowellOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkVersorRigid3DTransformOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkVersorTransformOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkOnePlusOneEvolutionaryOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkMultipleValuedNonLinearOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkLBFGSBOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkCumulativeGaussianOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkAmoebaOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkCumulativeGaussianCostFunction.cxx.o CMakeFiles/ITKOptimizers.dir/itkOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkFRPROptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkGradientDescentOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkSingleValuedNonLinearOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkRegularStepGradientDescentBaseOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkMultipleValuedVnlCostFunctionAdaptor.cxx.o CMakeFiles/ITKOptimizers.dir/itkParticleSwarmOptimizerBase.cxx.o CMakeFiles/ITKOptimizers.dir/itkParticleSwarmOptimizer.cxx.o CMakeFiles/ITKOptimizers.dir/itkInitializationBiasedParticleSwarmOptimizer.cxx.o ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKOptimizers-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKOptimizers make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/RAW/CMakeFiles/ITKIORAWHeaderTest1.dir/build.make Modules/IO/RAW/CMakeFiles/ITKIORAWHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIORAWHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/RAW && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIORAW /<>/Modules/IO/RAW /<>/BUILD/Modules/IO/RAW 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/RAW /<>/BUILD /<>/BUILD/Modules/IO/RAW /<>/BUILD/Modules/IO/RAW/CMakeFiles/ITKIORAWHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIORAWHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/RAW/CMakeFiles/ITKIORAWHeaderTest1.dir/build.make Modules/IO/RAW/CMakeFiles/ITKIORAWHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/RAW/CMakeFiles/ITKIORAWHeaderTest1.dir/test/ITKIORAWHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/CSV/src && /usr/bin/c++ -DITKIOCSV_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/CSV/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOCSV.dir/itkCSVFileReaderBase.cxx.o -c /<>/Modules/IO/CSV/src/itkCSVFileReaderBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOCSV-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/MRC/src && /usr/bin/c++ -DITKIOMRC_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMRC.dir/itkMRCHeaderObject.cxx.o -c /<>/Modules/IO/MRC/src/itkMRCHeaderObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/MRC/src/CMakeFiles/ITKIOMRC.dir/itkMRCImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/CSV/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOCSV.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOCSV-4.12.so.1 -o ../../../../lib/libITKIOCSV-4.12.so.1 CMakeFiles/ITKIOCSV.dir/itkCSVFileReaderBase.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/CSV/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOCSV-4.12.so.1 ../../../../lib/libITKIOCSV-4.12.so.1 ../../../../lib/libITKIOCSV-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/HDF5/src && /usr/bin/c++ -DITKIOHDF5_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOHDF5.dir/itkHDF5ImageIOFactory.cxx.o -c /<>/Modules/IO/HDF5/src/itkHDF5ImageIOFactory.cxx In file included from /<>/Modules/IO/HDF5/src/itkHDF5ImageIOFactory.cxx:18: In file included from /<>/Modules/IO/HDF5/include/itkHDF5ImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOCSV make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageNoise/CMakeFiles/ITKImageNoiseHeaderTest1.dir/build.make Modules/Filtering/ImageNoise/CMakeFiles/ITKImageNoiseHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/HDF5/src/CMakeFiles/ITKIOHDF5.dir/itkHDF5ImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKImageNoiseHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageNoise && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageNoise /<>/Modules/Filtering/ImageNoise /<>/BUILD/Modules/Filtering/ImageNoise 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageNoise /<>/BUILD /<>/BUILD/Modules/Filtering/ImageNoise /<>/BUILD/Modules/Filtering/ImageNoise/CMakeFiles/ITKImageNoiseHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageNoiseHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageNoise/CMakeFiles/ITKImageNoiseHeaderTest1.dir/build.make Modules/Filtering/ImageNoise/CMakeFiles/ITKImageNoiseHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Filtering/ImageNoise/CMakeFiles/ITKImageNoiseHeaderTest1.dir/test/ITKImageNoiseHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/RAW && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIORAWHeaderTest1.dir/test/ITKIORAWHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/RAW/test/ITKIORAWHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/RAW/test/ITKIORAWHeaderTest1.cxx:23: In file included from /<>/Modules/IO/RAW/include/itkRawImageIO.hxx:21: In file included from /<>/Modules/IO/RAW/include/itkRawImageIO.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIORAWHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/RAW && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIORAWHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIORAWHeaderTest1.dir/test/ITKIORAWHeaderTest1.cxx.o -o ../../../bin/ITKIORAWHeaderTest1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Stimulate/src && /usr/bin/c++ -DITKIOStimulate_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOStimulate.dir/itkStimulateImageIO.cxx.o -c /<>/Modules/IO/Stimulate/src/itkStimulateImageIO.cxx In file included from /<>/Modules/IO/Stimulate/src/itkStimulateImageIO.cxx:28: In file included from /<>/Modules/IO/Stimulate/include/itkStimulateImageIO.h:34: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIORAWHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/KLMRegionGrowing/CMakeFiles/ITKKLMRegionGrowingHeaderTest1.dir/build.make Modules/Segmentation/KLMRegionGrowing/CMakeFiles/ITKKLMRegionGrowingHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Stimulate/src/CMakeFiles/ITKIOStimulate.dir/itkStimulateImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKKLMRegionGrowingHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/KLMRegionGrowing && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKKLMRegionGrowing /<>/Modules/Segmentation/KLMRegionGrowing /<>/BUILD/Modules/Segmentation/KLMRegionGrowing 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/KLMRegionGrowing /<>/BUILD /<>/BUILD/Modules/Segmentation/KLMRegionGrowing /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/CMakeFiles/ITKKLMRegionGrowingHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKKLMRegionGrowingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/KLMRegionGrowing/CMakeFiles/ITKKLMRegionGrowingHeaderTest1.dir/build.make Modules/Segmentation/KLMRegionGrowing/CMakeFiles/ITKKLMRegionGrowingHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Segmentation/KLMRegionGrowing/CMakeFiles/ITKKLMRegionGrowingHeaderTest1.dir/test/ITKKLMRegionGrowingHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/IPL/src && /usr/bin/c++ -DITKIOIPL_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOIPL.dir/itkIPLCommonImageIO.cxx.o -c /<>/Modules/IO/IPL/src/itkIPLCommonImageIO.cxx In file included from /<>/Modules/IO/IPL/src/itkIPLCommonImageIO.cxx:20: In file included from /<>/Modules/IO/IPL/include/itkIPLCommonImageIO.h:36: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/IPL/src/CMakeFiles/ITKIOIPL.dir/itkIPLFileNameList.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageNoise && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageNoiseHeaderTest1.dir/test/ITKImageNoiseHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/ImageNoise/test/ITKImageNoiseHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/ImageNoise/test/ITKImageNoiseHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/ImageNoise/include/itkShotNoiseImageFilter.hxx:21: In file included from /<>/Modules/Filtering/ImageNoise/include/itkShotNoiseImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageNoise/include/itkNoiseBaseImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKImageNoiseHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Stimulate/src && /usr/bin/c++ -DITKIOStimulate_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOStimulate.dir/itkStimulateImageIOFactory.cxx.o -c /<>/Modules/IO/Stimulate/src/itkStimulateImageIOFactory.cxx In file included from /<>/Modules/IO/Stimulate/src/itkStimulateImageIOFactory.cxx:28: In file included from /<>/Modules/IO/Stimulate/include/itkStimulateImageIOFactory.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOStimulate-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageNoise && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageNoiseHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageNoiseHeaderTest1.dir/test/ITKImageNoiseHeaderTest1.cxx.o -o ../../../bin/ITKImageNoiseHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKImageNoiseHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworksHeaderTest2.dir/build.make Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworksHeaderTest2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKNeuralNetworksHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKNeuralNetworks /<>/Modules/Numerics/NeuralNetworks /<>/BUILD/Modules/Numerics/NeuralNetworks 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Stimulate/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOStimulate.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOStimulate-4.12.so.1 -o ../../../../lib/libITKIOStimulate-4.12.so.1 CMakeFiles/ITKIOStimulate.dir/itkStimulateImageIO.cxx.o CMakeFiles/ITKIOStimulate.dir/itkStimulateImageIOFactory.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/NeuralNetworks /<>/BUILD /<>/BUILD/Modules/Numerics/NeuralNetworks /<>/BUILD/Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworksHeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNeuralNetworksHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworksHeaderTest2.dir/build.make Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworksHeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Stimulate/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworksHeaderTest2.dir/test/ITKNeuralNetworksHeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOStimulate make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworksHeaderTest1.dir/build.make Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworksHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKNeuralNetworksHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKNeuralNetworks /<>/Modules/Numerics/NeuralNetworks /<>/BUILD/Modules/Numerics/NeuralNetworks 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/NeuralNetworks /<>/BUILD /<>/BUILD/Modules/Numerics/NeuralNetworks /<>/BUILD/Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworksHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNeuralNetworksHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworksHeaderTest1.dir/build.make Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworksHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/KLMRegionGrowing && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKKLMRegionGrowingHeaderTest1.dir/test/ITKKLMRegionGrowingHeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/test/ITKKLMRegionGrowingHeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/test/ITKKLMRegionGrowingHeaderTest1.cxx:27: In file included from /<>/Modules/Segmentation/KLMRegionGrowing/include/itkKLMRegionGrowImageFilter.hxx:20: In file included from /<>/Modules/Segmentation/KLMRegionGrowing/include/itkKLMRegionGrowImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworksHeaderTest1.dir/test/ITKNeuralNetworksHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKKLMRegionGrowingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/MRC/src && /usr/bin/c++ -DITKIOMRC_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMRC.dir/itkMRCImageIO.cxx.o -c /<>/Modules/IO/MRC/src/itkMRCImageIO.cxx In file included from /<>/Modules/IO/MRC/src/itkMRCImageIO.cxx:18: In file included from /<>/Modules/IO/MRC/include/itkMRCImageIO.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkStreamingImageIOBase.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/MRC/src/CMakeFiles/ITKIOMRC.dir/itkMRCImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/KLMRegionGrowing && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKKLMRegionGrowingHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKKLMRegionGrowingHeaderTest1.dir/test/ITKKLMRegionGrowingHeaderTest1.cxx.o -o ../../../bin/ITKKLMRegionGrowingHeaderTest1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKKLMRegionGrowingHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/QuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringHeaderTest1.dir/build.make Modules/Filtering/QuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKQuadEdgeMeshFilteringHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKQuadEdgeMeshFiltering /<>/Modules/Filtering/QuadEdgeMeshFiltering /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/QuadEdgeMeshFiltering /<>/BUILD /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMeshFilteringHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/QuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringHeaderTest1.dir/build.make Modules/Filtering/QuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/IPL/src && /usr/bin/c++ -DITKIOIPL_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOIPL.dir/itkIPLFileNameList.cxx.o -c /<>/Modules/IO/IPL/src/itkIPLFileNameList.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringHeaderTest1.dir/test/ITKQuadEdgeMeshFilteringHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOIPL-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/IPL/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOIPL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOIPL-4.12.so.1 -o ../../../../lib/libITKIOIPL-4.12.so.1 CMakeFiles/ITKIOIPL.dir/itkIPLCommonImageIO.cxx.o CMakeFiles/ITKIOIPL.dir/itkIPLFileNameList.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/IPL/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOIPL-4.12.so.1 ../../../../lib/libITKIOIPL-4.12.so.1 ../../../../lib/libITKIOIPL-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOIPL make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/SpatialFunction/CMakeFiles/ITKSpatialFunctionHeaderTest1.dir/build.make Modules/Filtering/SpatialFunction/CMakeFiles/ITKSpatialFunctionHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKSpatialFunctionHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/SpatialFunction && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKSpatialFunction /<>/Modules/Filtering/SpatialFunction /<>/BUILD/Modules/Filtering/SpatialFunction 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/SpatialFunction /<>/BUILD /<>/BUILD/Modules/Filtering/SpatialFunction /<>/BUILD/Modules/Filtering/SpatialFunction/CMakeFiles/ITKSpatialFunctionHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSpatialFunctionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/SpatialFunction/CMakeFiles/ITKSpatialFunctionHeaderTest1.dir/build.make Modules/Filtering/SpatialFunction/CMakeFiles/ITKSpatialFunctionHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Filtering/SpatialFunction/CMakeFiles/ITKSpatialFunctionHeaderTest1.dir/test/ITKSpatialFunctionHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksHeaderTest2.dir/test/ITKNeuralNetworksHeaderTest2.cxx.o -c /<>/BUILD/Modules/Numerics/NeuralNetworks/test/ITKNeuralNetworksHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKNeuralNetworksHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKNeuralNetworksHeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKNeuralNetworksHeaderTest2.dir/test/ITKNeuralNetworksHeaderTest2.cxx.o -o ../../../bin/ITKNeuralNetworksHeaderTest2 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKNeuralNetworksHeaderTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Bridge/VTK/CMakeFiles/ITKVTKHeaderTest1.dir/build.make Modules/Bridge/VTK/CMakeFiles/ITKVTKHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKVTKHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Bridge/VTK && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKVTK /<>/Modules/Bridge/VTK /<>/BUILD/Modules/Bridge/VTK 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Bridge/VTK /<>/BUILD /<>/BUILD/Modules/Bridge/VTK /<>/BUILD/Modules/Bridge/VTK/CMakeFiles/ITKVTKHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVTKHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Bridge/VTK/CMakeFiles/ITKVTKHeaderTest1.dir/build.make Modules/Bridge/VTK/CMakeFiles/ITKVTKHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Bridge/VTK/CMakeFiles/ITKVTKHeaderTest1.dir/test/ITKVTKHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Bridge/VTK && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Bridge/VTK/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVTKHeaderTest1.dir/test/ITKVTKHeaderTest1.cxx.o -c /<>/BUILD/Modules/Bridge/VTK/test/ITKVTKHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKVTKHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksHeaderTest1.dir/test/ITKNeuralNetworksHeaderTest1.cxx.o -c /<>/BUILD/Modules/Numerics/NeuralNetworks/test/ITKNeuralNetworksHeaderTest1.cxx In file included from /<>/BUILD/Modules/Numerics/NeuralNetworks/test/ITKNeuralNetworksHeaderTest1.cxx:23: In file included from /<>/Modules/Numerics/NeuralNetworks/include/itkRBFLayer.hxx:21: In file included from /<>/Modules/Numerics/NeuralNetworks/include/itkRBFLayer.h:26: In file included from /<>/Modules/Numerics/Statistics/include/itkEuclideanDistanceMetric.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkDistanceMetric.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKNeuralNetworksHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Bridge/VTK && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVTKHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKVTKHeaderTest1.dir/test/ITKVTKHeaderTest1.cxx.o -o ../../../bin/ITKVTKHeaderTest1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKVTKHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Voronoi/CMakeFiles/ITKVoronoiHeaderTest1.dir/build.make Modules/Segmentation/Voronoi/CMakeFiles/ITKVoronoiHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKVoronoiHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Voronoi && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKVoronoi /<>/Modules/Segmentation/Voronoi /<>/BUILD/Modules/Segmentation/Voronoi 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Voronoi /<>/BUILD /<>/BUILD/Modules/Segmentation/Voronoi /<>/BUILD/Modules/Segmentation/Voronoi/CMakeFiles/ITKVoronoiHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVoronoiHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Voronoi/CMakeFiles/ITKVoronoiHeaderTest1.dir/build.make Modules/Segmentation/Voronoi/CMakeFiles/ITKVoronoiHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Segmentation/Voronoi/CMakeFiles/ITKVoronoiHeaderTest1.dir/test/ITKVoronoiHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKNeuralNetworksHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKNeuralNetworksHeaderTest1.dir/test/ITKNeuralNetworksHeaderTest1.cxx.o -o ../../../bin/ITKNeuralNetworksHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKNeuralNetworksHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizersv4/src/CMakeFiles/ITKOptimizersv4.dir/build.make Modules/Numerics/Optimizersv4/src/CMakeFiles/ITKOptimizersv4.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizersv4/src /<>/BUILD /<>/BUILD/Modules/Numerics/Optimizersv4/src /<>/BUILD/Modules/Numerics/Optimizersv4/src/CMakeFiles/ITKOptimizersv4.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizersv4 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizersv4/src/CMakeFiles/ITKOptimizersv4.dir/build.make Modules/Numerics/Optimizersv4/src/CMakeFiles/ITKOptimizersv4.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizersv4/src/CMakeFiles/ITKOptimizersv4.dir/itkObjectToObjectOptimizerBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/MRC/src && /usr/bin/c++ -DITKIOMRC_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMRC.dir/itkMRCImageIOFactory.cxx.o -c /<>/Modules/IO/MRC/src/itkMRCImageIOFactory.cxx In file included from /<>/Modules/IO/MRC/src/itkMRCImageIOFactory.cxx:28: In file included from /<>/Modules/IO/MRC/include/itkMRCImageIOFactory.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOMRC-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringHeaderTest1.dir/test/ITKQuadEdgeMeshFilteringHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test/ITKQuadEdgeMeshFilteringHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test/ITKQuadEdgeMeshFilteringHeaderTest1.cxx:24: In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/include/itkDiscreteMaximumCurvatureQuadEdgeMeshFilter.h:21: In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/include/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilter.h:22: In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/include/itkQuadEdgeMeshParamMatrixCoefficients.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKQuadEdgeMeshFilteringHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKQuadEdgeMeshFilteringHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKQuadEdgeMeshFilteringHeaderTest1.dir/test/ITKQuadEdgeMeshFilteringHeaderTest1.cxx.o -o ../../../bin/ITKQuadEdgeMeshFilteringHeaderTest1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKQuadEdgeMeshFilteringHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Video/IO/src/CMakeFiles/ITKVideoIO.dir/build.make Modules/Video/IO/src/CMakeFiles/ITKVideoIO.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Video/IO/src /<>/BUILD /<>/BUILD/Modules/Video/IO/src /<>/BUILD/Modules/Video/IO/src/CMakeFiles/ITKVideoIO.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVideoIO make[3]: Leaving directory '/<>/BUILD' make -f Modules/Video/IO/src/CMakeFiles/ITKVideoIO.dir/build.make Modules/Video/IO/src/CMakeFiles/ITKVideoIO.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/MRC/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOMRC.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOMRC-4.12.so.1 -o ../../../../lib/libITKIOMRC-4.12.so.1 CMakeFiles/ITKIOMRC.dir/itkMRCHeaderObject.cxx.o CMakeFiles/ITKIOMRC.dir/itkMRCImageIO.cxx.o CMakeFiles/ITKIOMRC.dir/itkMRCImageIOFactory.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Video/IO/src/CMakeFiles/ITKVideoIO.dir/itkFileListVideoIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/MRC/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOMRC-4.12.so.1 ../../../../lib/libITKIOMRC-4.12.so.1 ../../../../lib/libITKIOMRC-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOMRC make[2]: Leaving directory '/<>/BUILD' make -f Modules/Video/Core/CMakeFiles/ITKVideoCoreHeaderTest1.dir/build.make Modules/Video/Core/CMakeFiles/ITKVideoCoreHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKVideoCoreHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKVideoCore /<>/Modules/Video/Core /<>/BUILD/Modules/Video/Core 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Video/Core /<>/BUILD /<>/BUILD/Modules/Video/Core /<>/BUILD/Modules/Video/Core/CMakeFiles/ITKVideoCoreHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVideoCoreHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Video/Core/CMakeFiles/ITKVideoCoreHeaderTest1.dir/build.make Modules/Video/Core/CMakeFiles/ITKVideoCoreHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/SpatialFunction && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialFunctionHeaderTest1.dir/test/ITKSpatialFunctionHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/SpatialFunction/test/ITKSpatialFunctionHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/SpatialFunction/test/ITKSpatialFunctionHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/SpatialFunction/include/itkSpatialFunctionImageEvaluatorFilter.hxx:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Video/Core/CMakeFiles/ITKVideoCoreHeaderTest1.dir/test/ITKVideoCoreHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKSpatialFunctionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/SpatialFunction && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKSpatialFunctionHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKSpatialFunctionHeaderTest1.dir/test/ITKSpatialFunctionHeaderTest1.cxx.o -o ../../../bin/ITKSpatialFunctionHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKSpatialFunctionHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Video/Filtering/CMakeFiles/ITKVideoFilteringHeaderTest1.dir/build.make Modules/Video/Filtering/CMakeFiles/ITKVideoFilteringHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKVideoFilteringHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Filtering && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKVideoFiltering /<>/Modules/Video/Filtering /<>/BUILD/Modules/Video/Filtering 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Video/Filtering /<>/BUILD /<>/BUILD/Modules/Video/Filtering /<>/BUILD/Modules/Video/Filtering/CMakeFiles/ITKVideoFilteringHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVideoFilteringHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Video/Filtering/CMakeFiles/ITKVideoFilteringHeaderTest1.dir/build.make Modules/Video/Filtering/CMakeFiles/ITKVideoFilteringHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Video/Filtering/CMakeFiles/ITKVideoFilteringHeaderTest1.dir/test/ITKVideoFilteringHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Voronoi && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVoronoiHeaderTest1.dir/test/ITKVoronoiHeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/Voronoi/test/ITKVoronoiHeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/Voronoi/test/ITKVoronoiHeaderTest1.cxx:23: In file included from /<>/Modules/Segmentation/Voronoi/include/itkVoronoiPartitioningImageFilter.hxx:20: In file included from /<>/Modules/Segmentation/Voronoi/include/itkVoronoiPartitioningImageFilter.h:21: In file included from /<>/Modules/Segmentation/Voronoi/include/itkVoronoiSegmentationImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKVoronoiHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Voronoi && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVoronoiHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKVoronoiHeaderTest1.dir/test/ITKVoronoiHeaderTest1.cxx.o -o ../../../bin/ITKVoronoiHeaderTest1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKVoronoiHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowSwig.dir/build.make Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/CurvatureFlow/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCurvatureFlowSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowSwig.dir/build.make Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkCurvatureFlowImageFilter.i, ../../Typedefs/itkMinMaxCurvatureFlowImageFilter.i, ../../Typedefs/itkBinaryMinMaxCurvatureFlowImageFilter.i, ../../Typedefs/itkCurvatureFlowImageFilterSwigInterface.h, ../../Typedefs/itkMinMaxCurvatureFlowImageFilterSwigInterface.h, ../../Typedefs/itkBinaryMinMaxCurvatureFlowImageFilterSwigInterface.h, ../../Typedefs/itkCurvatureFlowImageFilter.idx, ../../Typedefs/itkMinMaxCurvatureFlowImageFilter.idx, ../../Typedefs/itkBinaryMinMaxCurvatureFlowImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Video/Core/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoCoreHeaderTest1.dir/test/ITKVideoCoreHeaderTest1.cxx.o -c /<>/BUILD/Modules/Video/Core/test/ITKVideoCoreHeaderTest1.cxx In file included from /<>/BUILD/Modules/Video/Core/test/ITKVideoCoreHeaderTest1.cxx:23: In file included from /<>/Modules/Video/Core/include/itkVideoStream.hxx:21: In file included from /<>/Modules/Video/Core/include/itkVideoStream.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKVideoCoreHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/src && /usr/bin/c++ -DITKOptimizersv4_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizersv4.dir/itkObjectToObjectOptimizerBase.cxx.o -c /<>/Modules/Numerics/Optimizersv4/src/itkObjectToObjectOptimizerBase.cxx In file included from /<>/Modules/Numerics/Optimizersv4/src/itkObjectToObjectOptimizerBase.cxx:19: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVideoCoreHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKVideoCoreHeaderTest1.dir/test/ITKVideoCoreHeaderTest1.cxx.o -o ../../../bin/ITKVideoCoreHeaderTest1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizersv4/src/CMakeFiles/ITKOptimizersv4.dir/itkSingleValuedNonLinearVnlOptimizerv4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKVideoCoreHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformSwig.dir/build.make Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Transform/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKTransform /<>/BUILD/Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTransformSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformSwig.dir/build.make Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkCompositeTransform.i, ../../Typedefs/itkTransformBase.i, ../../Typedefs/itkMatrixOffsetTransformBase.i, ../../Typedefs/itkEuler2DTransform.i, ../../Typedefs/itkEuler3DTransform.i, ../../Typedefs/itkMultiTransform.i, ../../Typedefs/itkVersorTransform.i, ../../Typedefs/itkVersorRigid3DTransform.i, ../../Typedefs/itkSimilarity2DTransform.i, ../../Typedefs/itkSimilarity3DTransform.i, ../../Typedefs/itkAffineTransform.i, ../../Typedefs/itkScalableAffineTransform.i, ../../Typedefs/itkScaleTransform.i, ../../Typedefs/itkKernelTransform.i, ../../Typedefs/itkAzimuthElevationToCartesianTransform.i, ../../Typedefs/itkBSplineBaseTransform.i, ../../Typedefs/itkBSplineTransform.i, ../../Typedefs/itkCenteredAffineTransform.i, ../../Typedefs/itkCenteredEuler3DTransform.i, ../../Typedefs/itkCenteredRigid2DTransform.i, ../../Typedefs/itkCenteredSimilarity2DTransform.i, ../../Typedefs/itkElasticBodyReciprocalSplineKernelTransform.i, ../../Typedefs/itkElasticBodySplineKernelTransform.i, ../../Typedefs/itkFixedCenterOfRotationAffineTransform.i, ../../Typedefs/itkIdentityTransform.i, ../../Typedefs/itkQuaternionRigidTransform.i, ../../Typedefs/itkRigid2DTransform.i, ../../Typedefs/itkRigid3DPerspectiveTransform.i, ../../Typedefs/itkRigid3DTransform.i, ../../Typedefs/itkScaleLogarithmicTransform.i, ../../Typedefs/itkScaleSkewVersor3DTransform.i, ../../Typedefs/itkScaleVersor3DTransform.i, ../../Typedefs/itkThinPlateR2LogRSplineKernelTransform.i, ../../Typedefs/itkThinPlateSplineKernelTransform.i, ../../Typedefs/itkTranslationTransform.i, ../../Typedefs/itkVolumeSplineKernelTransform.i, ../../Typedefs/itkCompositeTransformSwigInterface.h, ../../Typedefs/itkTransformBaseSwigInterface.h, ../../Typedefs/itkMatrixOffsetTransformBaseSwigInterface.h, ../../Typedefs/itkEuler2DTransformSwigInterface.h, ../../Typedefs/itkEuler3DTransformSwigInterface.h, ../../Typedefs/itkMultiTransformSwigInterface.h, ../../Typedefs/itkVersorTransformSwigInterface.h, ../../Typedefs/itkVersorRigid3DTransformSwigInterface.h, ../../Typedefs/itkSimilarity2DTransformSwigInterface.h, ../../Typedefs/itkSimilarity3DTransformSwigInterface.h, ../../Typedefs/itkAffineTransformSwigInterface.h, ../../Typedefs/itkScalableAffineTransformSwigInterface.h, ../../Typedefs/itkScaleTransformSwigInterface.h, ../../Typedefs/itkKernelTransformSwigInterface.h, ../../Typedefs/itkAzimuthElevationToCartesianTransformSwigInterface.h, ../../Typedefs/itkBSplineBaseTransformSwigInterface.h, ../../Typedefs/itkBSplineTransformSwigInterface.h, ../../Typedefs/itkCenteredAffineTransformSwigInterface.h, ../../Typedefs/itkCenteredEuler3DTransformSwigInterface.h, ../../Typedefs/itkCenteredRigid2DTransformSwigInterface.h, ../../Typedefs/itkCenteredSimilarity2DTransformSwigInterface.h, ../../Typedefs/itkElasticBodyReciprocalSplineKernelTransformSwigInterface.h, ../../Typedefs/itkElasticBodySplineKernelTransformSwigInterface.h, ../../Typedefs/itkFixedCenterOfRotationAffineTransformSwigInterface.h, ../../Typedefs/itkIdentityTransformSwigInterface.h, ../../Typedefs/itkQuaternionRigidTransformSwigInterface.h, ../../Typedefs/itkRigid2DTransformSwigInterface.h, ../../Typedefs/itkRigid3DPerspectiveTransformSwigInterface.h, ../../Typedefs/itkRigid3DTransformSwigInterface.h, ../../Typedefs/itkScaleLogarithmicTransformSwigInterface.h, ../../Typedefs/itkScaleSkewVersor3DTransformSwigInterface.h, ../../Typedefs/itkScaleVersor3DTransformSwigInterface.h, ../../Typedefs/itkThinPlateR2LogRSplineKernelTransformSwigInterface.h, ../../Typedefs/itkThinPlateSplineKernelTransformSwigInterface.h, ../../Typedefs/itkTranslationTransformSwigInterface.h, ../../Typedefs/itkVolumeSplineKernelTransformSwigInterface.h, ../../Typedefs/itkCompositeTransform.idx, ../../Typedefs/itkTransformBase.idx, ../../Typedefs/itkMatrixOffsetTransformBase.idx, ../../Typedefs/itkEuler2DTransform.idx, ../../Typedefs/itkEuler3DTransform.idx, ../../Typedefs/itkMultiTransform.idx, ../../Typedefs/itkVersorTransform.idx, ../../Typedefs/itkVersorRigid3DTransform.idx, ../../Typedefs/itkSimilarity2DTransform.idx, ../../Typedefs/itkSimilarity3DTransform.idx, ../../Typedefs/itkAffineTransform.idx, ../../Typedefs/itkScalableAffineTransform.idx, ../../Typedefs/itkScaleTransform.idx, ../../Typedefs/itkKernelTransform.idx, ../../Typedefs/itkAzimuthElevationToCartesianTransform.idx, ../../Typedefs/itkBSplineBaseTransform.idx, ../../Typedefs/itkBSplineTransform.idx, ../../Typedefs/itkCenteredAffineTransform.idx, ../../Typedefs/itkCenteredEuler3DTransform.idx, ../../Typedefs/itkCenteredRigid2DTransform.idx, ../../Typedefs/itkCenteredSimilarity2DTransform.idx, ../../Typedefs/itkElasticBodyReciprocalSplineKernelTransform.idx, ../../Typedefs/itkElasticBodySplineKernelTransform.idx, ../../Typedefs/itkFixedCenterOfRotationAffineTransform.idx, ../../Typedefs/itkIdentityTransform.idx, ../../Typedefs/itkQuaternionRigidTransform.idx, ../../Typedefs/itkRigid2DTransform.idx, ../../Typedefs/itkRigid3DPerspectiveTransform.idx, ../../Typedefs/itkRigid3DTransform.idx, ../../Typedefs/itkScaleLogarithmicTransform.idx, ../../Typedefs/itkScaleSkewVersor3DTransform.idx, ../../Typedefs/itkScaleVersor3DTransform.idx, ../../Typedefs/itkThinPlateR2LogRSplineKernelTransform.idx, ../../Typedefs/itkThinPlateSplineKernelTransform.idx, ../../Typedefs/itkTranslationTransform.idx, ../../Typedefs/itkVolumeSplineKernelTransform.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Filtering && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/Filtering/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoFilteringHeaderTest1.dir/test/ITKVideoFilteringHeaderTest1.cxx.o -c /<>/BUILD/Modules/Video/Filtering/test/ITKVideoFilteringHeaderTest1.cxx In file included from /<>/BUILD/Modules/Video/Filtering/test/ITKVideoFilteringHeaderTest1.cxx:23: In file included from /<>/Modules/Video/Filtering/include/itkFrameDifferenceVideoFilter.hxx:21: In file included from /<>/Modules/Video/Filtering/include/itkFrameDifferenceVideoFilter.h:21: In file included from /<>/Modules/Video/Core/include/itkVideoToVideoFilter.h:21: In file included from /<>/Modules/Video/Core/include/itkVideoSource.h:22: In file included from /<>/Modules/Video/Core/include/itkVideoStream.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKVideoFilteringHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVideoFilteringHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKVideoFilteringHeaderTest1.dir/test/ITKVideoFilteringHeaderTest1.cxx.o -o ../../../bin/ITKVideoFilteringHeaderTest1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKVideoFilteringHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizersv4/src/CMakeFiles/ITKOptimizersv4.dir/itkSingleValuedVnlCostFunctionAdaptorv4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO/src && /usr/bin/c++ -DITKVideoIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKVideoIO.dir/itkFileListVideoIO.cxx.o -c /<>/Modules/Video/IO/src/itkFileListVideoIO.cxx In file included from /<>/Modules/Video/IO/src/itkFileListVideoIO.cxx:18: In file included from /<>/Modules/Video/IO/include/itkFileListVideoIO.h:21: In file included from /<>/Modules/Video/IO/include/itkVideoIOBase.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Video/IO/src/CMakeFiles/ITKVideoIO.dir/itkFileListVideoIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/HDF5/src && /usr/bin/c++ -DITKIOHDF5_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOHDF5.dir/itkHDF5ImageIO.cxx.o -c /<>/Modules/IO/HDF5/src/itkHDF5ImageIO.cxx In file included from /<>/Modules/IO/HDF5/src/itkHDF5ImageIO.cxx:19: In file included from /<>/Modules/IO/HDF5/include/itkHDF5ImageIO.h:45: In file included from /<>/Modules/IO/ImageBase/include/itkStreamingImageIOBase.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOHDF5-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/HDF5/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOHDF5.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOHDF5-4.12.so.1 -o ../../../../lib/libITKIOHDF5-4.12.so.1 CMakeFiles/ITKIOHDF5.dir/itkHDF5ImageIOFactory.cxx.o CMakeFiles/ITKIOHDF5.dir/itkHDF5ImageIO.cxx.o /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/HDF5/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOHDF5-4.12.so.1 ../../../../lib/libITKIOHDF5-4.12.so.1 ../../../../lib/libITKIOHDF5-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/src && /usr/bin/c++ -DITKOptimizersv4_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizersv4.dir/itkSingleValuedNonLinearVnlOptimizerv4.cxx.o -c /<>/Modules/Numerics/Optimizersv4/src/itkSingleValuedNonLinearVnlOptimizerv4.cxx In file included from /<>/Modules/Numerics/Optimizersv4/src/itkSingleValuedNonLinearVnlOptimizerv4.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkSingleValuedNonLinearVnlOptimizerv4.h:23: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizersv4/src/CMakeFiles/ITKOptimizersv4.dir/itkLBFGSOptimizerv4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/src && /usr/bin/c++ -DITKOptimizersv4_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizersv4.dir/itkSingleValuedVnlCostFunctionAdaptorv4.cxx.o -c /<>/Modules/Numerics/Optimizersv4/src/itkSingleValuedVnlCostFunctionAdaptorv4.cxx In file included from /<>/Modules/Numerics/Optimizersv4/src/itkSingleValuedVnlCostFunctionAdaptorv4.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkSingleValuedVnlCostFunctionAdaptorv4.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizersv4/src/CMakeFiles/ITKOptimizersv4.dir/itkLBFGSBOptimizerv4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO/src && /usr/bin/c++ -DITKVideoIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKVideoIO.dir/itkFileListVideoIOFactory.cxx.o -c /<>/Modules/Video/IO/src/itkFileListVideoIOFactory.cxx In file included from /<>/Modules/Video/IO/src/itkFileListVideoIOFactory.cxx:18: In file included from /<>/Modules/Video/IO/include/itkFileListVideoIOFactory.h:22: In file included from /<>/Modules/Video/IO/include/itkVideoIOBase.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Video/IO/src/CMakeFiles/ITKVideoIO.dir/itkVideoIOBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/src && /usr/bin/c++ -DITKOptimizersv4_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizersv4.dir/itkLBFGSOptimizerv4.cxx.o -c /<>/Modules/Numerics/Optimizersv4/src/itkLBFGSOptimizerv4.cxx In file included from /<>/Modules/Numerics/Optimizersv4/src/itkLBFGSOptimizerv4.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkLBFGSOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkLBFGSOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkSingleValuedNonLinearVnlOptimizerv4.h:23: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizersv4/src/CMakeFiles/ITKOptimizersv4.dir/itkAmoebaOptimizerv4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/src && /usr/bin/c++ -DITKOptimizersv4_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizersv4.dir/itkLBFGSBOptimizerv4.cxx.o -c /<>/Modules/Numerics/Optimizersv4/src/itkLBFGSBOptimizerv4.cxx In file included from /<>/Modules/Numerics/Optimizersv4/src/itkLBFGSBOptimizerv4.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkLBFGSBOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkLBFGSOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkSingleValuedNonLinearVnlOptimizerv4.h:23: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPSwig.dir/build.make Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO/src && /usr/bin/c++ -DITKVideoIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKVideoIO.dir/itkVideoIOBase.cxx.o -c /<>/Modules/Video/IO/src/itkVideoIOBase.cxx In file included from /<>/Modules/Video/IO/src/itkVideoIOBase.cxx:22: In file included from /<>/Modules/Video/IO/include/itkVideoIOBase.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BMP/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOBMP /<>/BUILD/Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBMPSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPSwig.dir/build.make Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Video/IO/src/CMakeFiles/ITKVideoIO.dir/itkVideoIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOHDF5 make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMSwig.dir/build.make Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GDCM/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOGDCM /<>/BUILD/Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGDCMSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMSwig.dir/build.make Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkBMPImageIO.i, ../../Typedefs/itkBMPImageIOSwigInterface.h, ../../Typedefs/itkBMPImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkGDCMImageIO.i, ../../Typedefs/itkGDCMImageIOSwigInterface.h, ../../Typedefs/itkGDCMImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOBMP && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOBMP.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkBMPImageIO make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOBMPSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLSwig.dir/build.make Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GIPL/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOGIPL /<>/BUILD/Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGIPLSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLSwig.dir/build.make Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkGiplImageIO.i, ../../Typedefs/itkGiplImageIOSwigInterface.h, ../../Typedefs/itkGiplImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformFactory/src && /usr/bin/c++ -DITKTransformFactory_EXPORTS -DITK_TRANSFORM_FACTORY_MAX_DIM=4 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKTransformFactory.dir/itkTransformFactoryBaseRegisterFloatParameters.cxx.o -c /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegisterFloatParameters.cxx In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegisterFloatParameters.cxx:18: In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegister.hxx:23: In file included from /<>/Modules/Core/Transform/include/itkAzimuthElevationToCartesianTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegisterFloatParameters.cxx:18: In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegister.hxx:25: In file included from /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:38:10: note: in instantiation of template class 'itk::Euler3DTransform' requested here public Euler3DTransform ^ /<>/Modules/IO/TransformFactory/include/itkTransformFactory.h:46:14: note: in instantiation of template class 'itk::CenteredEuler3DTransform' requested here typename T::Pointer t = T::New(); ^ /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegister.hxx:117:66: note: in instantiation of member function 'itk::TransformFactory >::RegisterTransform' requested here TransformFactory< CenteredEuler3DTransform >::RegisterTransform (); ^ /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegisterFloatParameters.cxx:28:9: note: in instantiation of function template specialization 'itk::TransformFactoryBase::RegisterTransformFactory' requested here Self::RegisterTransformFactory(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegisterFloatParameters.cxx:18: In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegister.hxx:35: In file included from /<>/Modules/Core/Transform/include/itkScaleVersor3DTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/include/itkScaleSkewVersor3DTransform.h:55:10: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here public VersorRigid3DTransform ^ /<>/Modules/IO/TransformFactory/include/itkTransformFactory.h:46:14: note: in instantiation of template class 'itk::ScaleSkewVersor3DTransform' requested here typename T::Pointer t = T::New(); ^ /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegister.hxx:141:68: note: in instantiation of member function 'itk::TransformFactory >::RegisterTransform' requested here TransformFactory< ScaleSkewVersor3DTransform >::RegisterTransform (); ^ /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegisterFloatParameters.cxx:28:9: note: in instantiation of function template specialization 'itk::TransformFactoryBase::RegisterTransformFactory' requested here Self::RegisterTransformFactory(); ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGSwig.dir/build.make Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/JPEG/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOJPEG /<>/BUILD/Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOJPEGSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGSwig.dir/build.make Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkJPEGImageIO.i, ../../Typedefs/itkJPEGImageIOSwigInterface.h, ../../Typedefs/itkJPEGImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKCurvatureFlow.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKFiniteDifference.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFilterBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkCurvatureFlowImageFilter;itkMinMaxCurvatureFlowImageFilter;itkBinaryMinMaxCurvatureFlowImageFilter" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGDCM && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOGDCM.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkGDCMImageIO make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOGDCMSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaSwig.dir/build.make Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Meta/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOMeta /<>/BUILD/Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMetaSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaSwig.dir/build.make Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkMetaImageIO.i, ../../Typedefs/itkMetaImageIOSwigInterface.h, ../../Typedefs/itkMetaImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKCurvatureFlowSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDSwig.dir/build.make Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NRRD/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIONRRD /<>/BUILD/Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONRRDSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDSwig.dir/build.make Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkNrrdImageIO.i, ../../Typedefs/itkNrrdImageIOSwigInterface.h, ../../Typedefs/itkNrrdImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO/src && /usr/bin/c++ -DITKVideoIO_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKVideoIO.dir/itkVideoIOFactory.cxx.o -c /<>/Modules/Video/IO/src/itkVideoIOFactory.cxx In file included from /<>/Modules/Video/IO/src/itkVideoIOFactory.cxx:22: In file included from /<>/Modules/Video/IO/include/itkVideoIOFactory.h:21: In file included from /<>/Modules/Video/IO/include/itkVideoIOBase.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKVideoIO-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGIPL && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOGIPL.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkGiplImageIO make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/src && /usr/bin/c++ -DITKOptimizersv4_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKOptimizersv4.dir/itkAmoebaOptimizerv4.cxx.o -c /<>/Modules/Numerics/Optimizersv4/src/itkAmoebaOptimizerv4.cxx In file included from /<>/Modules/Numerics/Optimizersv4/src/itkAmoebaOptimizerv4.cxx:19: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkAmoebaOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkSingleValuedNonLinearVnlOptimizerv4.h:23: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKOptimizersv4-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOGIPLSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGSwig.dir/build.make Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/PNG/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOPNG /<>/BUILD/Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOPNGSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGSwig.dir/build.make Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkPNGImageIO.i, ../../Typedefs/itkPNGImageIOSwigInterface.h, ../../Typedefs/itkPNGImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOJPEG && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOJPEG.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkJPEGImageIO make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVideoIO.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKVideoIO-4.12.so.1 -o ../../../../lib/libITKVideoIO-4.12.so.1 CMakeFiles/ITKVideoIO.dir/itkFileListVideoIO.cxx.o CMakeFiles/ITKVideoIO.dir/itkFileListVideoIOFactory.cxx.o CMakeFiles/ITKVideoIO.dir/itkVideoIOBase.cxx.o CMakeFiles/ITKVideoIO.dir/itkVideoIOFactory.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKVideoCore-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOJPEGSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFSwig.dir/build.make Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKVideoIO-4.12.so.1 ../../../../lib/libITKVideoIO-4.12.so.1 ../../../../lib/libITKVideoIO-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TIFF/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOTIFF /<>/BUILD/Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTIFFSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFSwig.dir/build.make Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFSwig.dir/build make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKVideoIO make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKSwig.dir/build.make Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKSwig.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkTIFFImageIO.i, ../../Typedefs/itkTIFFImageIOSwigInterface.h, ../../Typedefs/itkTIFFImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/VTK/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOVTK /<>/BUILD/Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOVTKSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKSwig.dir/build.make Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkVTKImageIO.i, ../../Typedefs/itkVTKImageIOSwigInterface.h, ../../Typedefs/itkVTKImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKOptimizersv4.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKOptimizersv4-4.12.so.1 -o ../../../../lib/libITKOptimizersv4-4.12.so.1 CMakeFiles/ITKOptimizersv4.dir/itkObjectToObjectOptimizerBase.cxx.o CMakeFiles/ITKOptimizersv4.dir/itkSingleValuedNonLinearVnlOptimizerv4.cxx.o CMakeFiles/ITKOptimizersv4.dir/itkSingleValuedVnlCostFunctionAdaptorv4.cxx.o CMakeFiles/ITKOptimizersv4.dir/itkLBFGSOptimizerv4.cxx.o CMakeFiles/ITKOptimizersv4.dir/itkLBFGSBOptimizerv4.cxx.o CMakeFiles/ITKOptimizersv4.dir/itkAmoebaOptimizerv4.cxx.o ../../../../lib/libITKOptimizers-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKOptimizersv4-4.12.so.1 ../../../../lib/libITKOptimizersv4-4.12.so.1 ../../../../lib/libITKOptimizersv4-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIONRRD && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIONRRD.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkNrrdImageIO make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKOptimizersv4 make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposeSwig.dir/build.make Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposeSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOMeta && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOMeta.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkMetaImageIO make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageCompose/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageCompose /<>/BUILD/Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposeSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageComposeSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposeSwig.dir/build.make Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposeSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkComposeImageFilter.i, ../../Typedefs/itkJoinSeriesImageFilter.i, ../../Typedefs/itkComposeImageFilterSwigInterface.h, ../../Typedefs/itkJoinSeriesImageFilterSwigInterface.h, ../../Typedefs/itkComposeImageFilter.idx, ../../Typedefs/itkJoinSeriesImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIONRRDSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersSwig.dir/build.make Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersSwig.dir/depend make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOMetaSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadSwig.dir/build.make Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BioRad/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOBioRad /<>/BUILD/Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBioRadSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadSwig.dir/build.make Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadSwig.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizers/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKOptimizers /<>/BUILD/Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizersSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersSwig.dir/build.make Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkBioRadImageIO.i, ../../Typedefs/itkBioRadImageIOSwigInterface.h, ../../Typedefs/itkBioRadImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/ITKCostFunctions.i, ../../Typedefs/ITKOptimizersBase.i, ../../Typedefs/itkCostFunction.i, ../../Typedefs/ITKCostFunctionsSwigInterface.h, ../../Typedefs/ITKOptimizersBaseSwigInterface.h, ../../Typedefs/itkCostFunctionSwigInterface.h, ../../Typedefs/ITKCostFunctions.idx, ../../Typedefs/ITKOptimizersBase.idx, ../../Typedefs/itkCostFunction.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOPNG && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOPNG.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkPNGImageIO make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOVTK && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOVTK.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkVTKImageIO make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOPNGSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulateSwig.dir/build.make Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulateSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTIFF && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOTIFF.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkTIFFImageIO make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Stimulate/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOStimulate /<>/BUILD/Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulateSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOStimulateSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulateSwig.dir/build.make Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulateSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkStimulateImageIO.i, ../../Typedefs/itkStimulateImageIOSwigInterface.h, ../../Typedefs/itkStimulateImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOVTKSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGESwig.dir/build.make Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGESwig.dir/depend make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOTIFFSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensSwig.dir/build.make Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GE/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOGE /<>/BUILD/Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGESwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGESwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGESwig.dir/build.make Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGESwig.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Siemens/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOSiemens /<>/BUILD/Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSiemensSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensSwig.dir/build.make Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkGE4ImageIO.i, ../../Typedefs/itkGE5ImageIO.i, ../../Typedefs/itkGEAdwImageIO.i, ../../Typedefs/itkGE4ImageIOSwigInterface.h, ../../Typedefs/itkGE5ImageIOSwigInterface.h, ../../Typedefs/itkGEAdwImageIOSwigInterface.h, ../../Typedefs/itkGE4ImageIO.idx, ../../Typedefs/itkGE5ImageIO.idx, ../../Typedefs/itkGEAdwImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkSiemensVisionImageIO.i, ../../Typedefs/itkSiemensVisionImageIOSwigInterface.h, ../../Typedefs/itkSiemensVisionImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOBioRad && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOBioRad.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkBioRadImageIO make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOBioRadSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoiseSwig.dir/build.make Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoiseSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageNoise/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageNoise /<>/BUILD/Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoiseSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageNoiseSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoiseSwig.dir/build.make Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoiseSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating ../../Typedefs/itkAdditiveGaussianNoiseImageFilter.i, ../../Typedefs/itkNoiseBaseImageFilter.i, ../../Typedefs/itkSaltAndPepperNoiseImageFilter.i, ../../Typedefs/itkShotNoiseImageFilter.i, ../../Typedefs/itkSpeckleNoiseImageFilter.i, ../../Typedefs/itkAdditiveGaussianNoiseImageFilterSwigInterface.h, ../../Typedefs/itkNoiseBaseImageFilterSwigInterface.h, ../../Typedefs/itkSaltAndPepperNoiseImageFilterSwigInterface.h, ../../Typedefs/itkShotNoiseImageFilterSwigInterface.h, ../../Typedefs/itkSpeckleNoiseImageFilterSwigInterface.h, ../../Typedefs/itkAdditiveGaussianNoiseImageFilter.idx, ../../Typedefs/itkNoiseBaseImageFilter.idx, ../../Typedefs/itkSaltAndPepperNoiseImageFilter.idx, ../../Typedefs/itkShotNoiseImageFilter.idx, ../../Typedefs/itkSpeckleNoiseImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOStimulate && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOStimulate.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkStimulateImageIO make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOSiemens && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOSiemens.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOIPL.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkSiemensVisionImageIO make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOStimulateSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/BMP/src/CMakeFiles/ITKIOBMP.dir/build.make Modules/IO/BMP/src/CMakeFiles/ITKIOBMP.dir/depend make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOSiemensSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/GDCM/src/CMakeFiles/ITKIOGDCM.dir/build.make Modules/IO/GDCM/src/CMakeFiles/ITKIOGDCM.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BMP/src /<>/BUILD /<>/BUILD/Modules/IO/BMP/src /<>/BUILD/Modules/IO/BMP/src/CMakeFiles/ITKIOBMP.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBMP make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/BMP/src/CMakeFiles/ITKIOBMP.dir/build.make Modules/IO/BMP/src/CMakeFiles/ITKIOBMP.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/BMP/src/CMakeFiles/ITKIOBMP.dir/itkBMPImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GDCM/src /<>/BUILD /<>/BUILD/Modules/IO/GDCM/src /<>/BUILD/Modules/IO/GDCM/src/CMakeFiles/ITKIOGDCM.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGDCM make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GDCM/src/CMakeFiles/ITKIOGDCM.dir/build.make Modules/IO/GDCM/src/CMakeFiles/ITKIOGDCM.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/GDCM/src/CMakeFiles/ITKIOGDCM.dir/itkGDCMImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizers && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKOptimizers.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKStatistics.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "ITKCostFunctions;ITKOptimizersBase;itkCostFunction" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKOptimizersSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/GIPL/src/CMakeFiles/ITKIOGIPL.dir/build.make Modules/IO/GIPL/src/CMakeFiles/ITKIOGIPL.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GIPL/src /<>/BUILD /<>/BUILD/Modules/IO/GIPL/src /<>/BUILD/Modules/IO/GIPL/src/CMakeFiles/ITKIOGIPL.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGIPL make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GIPL/src/CMakeFiles/ITKIOGIPL.dir/build.make Modules/IO/GIPL/src/CMakeFiles/ITKIOGIPL.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/GIPL/src/CMakeFiles/ITKIOGIPL.dir/itkGiplImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGE && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOGE.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOIPL.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkGE4ImageIO;itkGE5ImageIO;itkGEAdwImageIO" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOGESwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/JPEG/src/CMakeFiles/ITKIOJPEG.dir/build.make Modules/IO/JPEG/src/CMakeFiles/ITKIOJPEG.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/JPEG/src /<>/BUILD /<>/BUILD/Modules/IO/JPEG/src /<>/BUILD/Modules/IO/JPEG/src/CMakeFiles/ITKIOJPEG.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOJPEG make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/JPEG/src/CMakeFiles/ITKIOJPEG.dir/build.make Modules/IO/JPEG/src/CMakeFiles/ITKIOJPEG.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/JPEG/src/CMakeFiles/ITKIOJPEG.dir/itkJPEGImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GIPL/src && /usr/bin/c++ -DITKIOGIPL_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GIPL/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOGIPL.dir/itkGiplImageIOFactory.cxx.o -c /<>/Modules/IO/GIPL/src/itkGiplImageIOFactory.cxx In file included from /<>/Modules/IO/GIPL/src/itkGiplImageIOFactory.cxx:18: In file included from /<>/Modules/IO/GIPL/include/itkGiplImageIOFactory.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/GIPL/src/CMakeFiles/ITKIOGIPL.dir/itkGiplImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/JPEG/src && /usr/bin/c++ -DITKIOJPEG_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/JPEG/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOJPEG.dir/itkJPEGImageIOFactory.cxx.o -c /<>/Modules/IO/JPEG/src/itkJPEGImageIOFactory.cxx In file included from /<>/Modules/IO/JPEG/src/itkJPEGImageIOFactory.cxx:18: In file included from /<>/Modules/IO/JPEG/include/itkJPEGImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/JPEG/src/CMakeFiles/ITKIOJPEG.dir/itkJPEGImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP/src && /usr/bin/c++ -DITKIOBMP_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOBMP.dir/itkBMPImageIO.cxx.o -c /<>/Modules/IO/BMP/src/itkBMPImageIO.cxx In file included from /<>/Modules/IO/BMP/src/itkBMPImageIO.cxx:18: In file included from /<>/Modules/IO/BMP/include/itkBMPImageIO.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/BMP/src/CMakeFiles/ITKIOBMP.dir/itkBMPImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompose && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageCompose.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFilterBase.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkComposeImageFilter;itkJoinSeriesImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKImageComposeSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Meta/src/CMakeFiles/ITKIOMeta.dir/build.make Modules/IO/Meta/src/CMakeFiles/ITKIOMeta.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Meta/src /<>/BUILD /<>/BUILD/Modules/IO/Meta/src /<>/BUILD/Modules/IO/Meta/src/CMakeFiles/ITKIOMeta.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMeta make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Meta/src/CMakeFiles/ITKIOMeta.dir/build.make Modules/IO/Meta/src/CMakeFiles/ITKIOMeta.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Meta/src/CMakeFiles/ITKIOMeta.dir/itkMetaArrayWriter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP/src && /usr/bin/c++ -DITKIOBMP_EXPORTS -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOBMP.dir/itkBMPImageIOFactory.cxx.o -c /<>/Modules/IO/BMP/src/itkBMPImageIOFactory.cxx In file included from /<>/Modules/IO/BMP/src/itkBMPImageIOFactory.cxx:18: In file included from /<>/Modules/IO/BMP/include/itkBMPImageIOFactory.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOBMP-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOBMP.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOBMP-4.12.so.1 -o ../../../../lib/libITKIOBMP-4.12.so.1 CMakeFiles/ITKIOBMP.dir/itkBMPImageIO.cxx.o CMakeFiles/ITKIOBMP.dir/itkBMPImageIOFactory.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOBMP-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOBMP make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/NIFTI/src/CMakeFiles/ITKIONIFTI.dir/build.make Modules/IO/NIFTI/src/CMakeFiles/ITKIONIFTI.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NIFTI/src /<>/BUILD /<>/BUILD/Modules/IO/NIFTI/src /<>/BUILD/Modules/IO/NIFTI/src/CMakeFiles/ITKIONIFTI.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONIFTI make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/NIFTI/src/CMakeFiles/ITKIONIFTI.dir/build.make Modules/IO/NIFTI/src/CMakeFiles/ITKIONIFTI.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/NIFTI/src/CMakeFiles/ITKIONIFTI.dir/itkNiftiImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/src && /usr/bin/c++ -DITKIOMeta_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMeta.dir/itkMetaArrayWriter.cxx.o -c /<>/Modules/IO/Meta/src/itkMetaArrayWriter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Meta/src/CMakeFiles/ITKIOMeta.dir/itkMetaImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GIPL/src && /usr/bin/c++ -DITKIOGIPL_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GIPL/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOGIPL.dir/itkGiplImageIO.cxx.o -c /<>/Modules/IO/GIPL/src/itkGiplImageIO.cxx In file included from /<>/Modules/IO/GIPL/src/itkGiplImageIO.cxx:18: In file included from /<>/Modules/IO/GIPL/include/itkGiplImageIO.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/JPEG/src && /usr/bin/c++ -DITKIOJPEG_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/JPEG/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOJPEG.dir/itkJPEGImageIO.cxx.o -c /<>/Modules/IO/JPEG/src/itkJPEGImageIO.cxx In file included from /<>/Modules/IO/JPEG/src/itkJPEGImageIO.cxx:19: In file included from /<>/Modules/IO/JPEG/include/itkJPEGImageIO.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOGIPL-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOJPEG-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GIPL/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOGIPL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOGIPL-4.12.so.1 -o ../../../../lib/libITKIOGIPL-4.12.so.1 CMakeFiles/ITKIOGIPL.dir/itkGiplImageIOFactory.cxx.o CMakeFiles/ITKIOGIPL.dir/itkGiplImageIO.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 -lz ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/JPEG/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOJPEG.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOJPEG-4.12.so.1 -o ../../../../lib/libITKIOJPEG-4.12.so.1 CMakeFiles/ITKIOJPEG.dir/itkJPEGImageIOFactory.cxx.o CMakeFiles/ITKIOJPEG.dir/itkJPEGImageIO.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 -ljpeg ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GIPL/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/JPEG/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOGIPL make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/NRRD/src/CMakeFiles/ITKIONRRD.dir/build.make Modules/IO/NRRD/src/CMakeFiles/ITKIONRRD.dir/depend make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOJPEG make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/PNG/src/CMakeFiles/ITKIOPNG.dir/build.make Modules/IO/PNG/src/CMakeFiles/ITKIOPNG.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NRRD/src /<>/BUILD /<>/BUILD/Modules/IO/NRRD/src /<>/BUILD/Modules/IO/NRRD/src/CMakeFiles/ITKIONRRD.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONRRD make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/NRRD/src/CMakeFiles/ITKIONRRD.dir/build.make Modules/IO/NRRD/src/CMakeFiles/ITKIONRRD.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/PNG/src /<>/BUILD /<>/BUILD/Modules/IO/PNG/src /<>/BUILD/Modules/IO/PNG/src/CMakeFiles/ITKIOPNG.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOPNG make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/PNG/src/CMakeFiles/ITKIOPNG.dir/build.make Modules/IO/PNG/src/CMakeFiles/ITKIOPNG.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/NRRD/src/CMakeFiles/ITKIONRRD.dir/itkNrrdImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/PNG/src/CMakeFiles/ITKIOPNG.dir/itkPNGImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/src && /usr/bin/c++ -DITKIONIFTI_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIONIFTI.dir/itkNiftiImageIOFactory.cxx.o -c /<>/Modules/IO/NIFTI/src/itkNiftiImageIOFactory.cxx In file included from /<>/Modules/IO/NIFTI/src/itkNiftiImageIOFactory.cxx:18: In file included from /<>/Modules/IO/NIFTI/include/itkNiftiImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/NIFTI/src/CMakeFiles/ITKIONIFTI.dir/itkNiftiImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/src && /usr/bin/c++ -DITKIONRRD_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIONRRD.dir/itkNrrdImageIOFactory.cxx.o -c /<>/Modules/IO/NRRD/src/itkNrrdImageIOFactory.cxx In file included from /<>/Modules/IO/NRRD/src/itkNrrdImageIOFactory.cxx:18: In file included from /<>/Modules/IO/NRRD/include/itkNrrdImageIOFactory.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/NRRD/src/CMakeFiles/ITKIONRRD.dir/itkNrrdImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/PNG/src && /usr/bin/c++ -DITKIOPNG_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/PNG/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOPNG.dir/itkPNGImageIOFactory.cxx.o -c /<>/Modules/IO/PNG/src/itkPNGImageIOFactory.cxx In file included from /<>/Modules/IO/PNG/src/itkPNGImageIOFactory.cxx:18: In file included from /<>/Modules/IO/PNG/include/itkPNGImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/PNG/src/CMakeFiles/ITKIOPNG.dir/itkPNGImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageNoise.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKStatistics.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkAdditiveGaussianNoiseImageFilter;itkNoiseBaseImageFilter;itkSaltAndPepperNoiseImageFilter;itkShotNoiseImageFilter;itkSpeckleNoiseImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKImageNoiseSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TIFF/src/CMakeFiles/ITKIOTIFF.dir/build.make Modules/IO/TIFF/src/CMakeFiles/ITKIOTIFF.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TIFF/src /<>/BUILD /<>/BUILD/Modules/IO/TIFF/src /<>/BUILD/Modules/IO/TIFF/src/CMakeFiles/ITKIOTIFF.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTIFF make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TIFF/src/CMakeFiles/ITKIOTIFF.dir/build.make Modules/IO/TIFF/src/CMakeFiles/ITKIOTIFF.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/TIFF/src/CMakeFiles/ITKIOTIFF.dir/itkTIFFImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/src && /usr/bin/c++ -DITKIOMeta_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMeta.dir/itkMetaImageIO.cxx.o -c /<>/Modules/IO/Meta/src/itkMetaImageIO.cxx In file included from /<>/Modules/IO/Meta/src/itkMetaImageIO.cxx:19: In file included from /<>/Modules/IO/Meta/include/itkMetaImageIO.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Meta/src/CMakeFiles/ITKIOMeta.dir/itkMetaArrayReader.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/PNG/src && /usr/bin/c++ -DITKIOPNG_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/PNG/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOPNG.dir/itkPNGImageIO.cxx.o -c /<>/Modules/IO/PNG/src/itkPNGImageIO.cxx In file included from /<>/Modules/IO/PNG/src/itkPNGImageIO.cxx:18: In file included from /<>/Modules/IO/PNG/include/itkPNGImageIO.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOPNG-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/PNG/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOPNG.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOPNG-4.12.so.1 -o ../../../../lib/libITKIOPNG-4.12.so.1 CMakeFiles/ITKIOPNG.dir/itkPNGImageIOFactory.cxx.o CMakeFiles/ITKIOPNG.dir/itkPNGImageIO.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 -lpng -lz ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/PNG/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOPNG make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/VTK/src/CMakeFiles/ITKIOVTK.dir/build.make Modules/IO/VTK/src/CMakeFiles/ITKIOVTK.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/VTK/src /<>/BUILD /<>/BUILD/Modules/IO/VTK/src /<>/BUILD/Modules/IO/VTK/src/CMakeFiles/ITKIOVTK.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOVTK make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/VTK/src/CMakeFiles/ITKIOVTK.dir/build.make Modules/IO/VTK/src/CMakeFiles/ITKIOVTK.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/src && /usr/bin/c++ -DITKIOMeta_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMeta.dir/itkMetaArrayReader.cxx.o -c /<>/Modules/IO/Meta/src/itkMetaArrayReader.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/VTK/src/CMakeFiles/ITKIOVTK.dir/itkVTKImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Meta/src/CMakeFiles/ITKIOMeta.dir/itkMetaImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/src && /usr/bin/c++ -DITKIONIFTI_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIONIFTI.dir/itkNiftiImageIO.cxx.o -c /<>/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx In file included from /<>/Modules/IO/NIFTI/src/itkNiftiImageIO.cxx:18: In file included from /<>/Modules/IO/NIFTI/include/itkNiftiImageIO.h:25: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIONIFTI-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIONIFTI.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIONIFTI-4.12.so.1 -o ../../../../lib/libITKIONIFTI-4.12.so.1 CMakeFiles/ITKIONIFTI.dir/itkNiftiImageIOFactory.cxx.o CMakeFiles/ITKIONIFTI.dir/itkNiftiImageIO.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 -lznz -lniftiio ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/src && /usr/bin/c++ -DITKIONRRD_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIONRRD.dir/itkNrrdImageIO.cxx.o -c /<>/Modules/IO/NRRD/src/itkNrrdImageIO.cxx In file included from /<>/Modules/IO/NRRD/src/itkNrrdImageIO.cxx:19: In file included from /<>/Modules/IO/NRRD/include/itkNrrdImageIO.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIONIFTI make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/build.make Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIONRRD-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/SpatialObjects/src /<>/BUILD /<>/BUILD/Modules/Core/SpatialObjects/src /<>/BUILD/Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSpatialObjects make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/build.make Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/itkMetaEvent.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIONRRD.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIONRRD-4.12.so.1 -o ../../../../lib/libITKIONRRD-4.12.so.1 CMakeFiles/ITKIONRRD.dir/itkNrrdImageIOFactory.cxx.o CMakeFiles/ITKIONRRD.dir/itkNrrdImageIO.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKNrrdIO-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lz -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIONRRD make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/ImageBase/CMakeFiles/ITKIOImageBaseHeaderTest1.dir/build.make Modules/IO/ImageBase/CMakeFiles/ITKIOImageBaseHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIOImageBaseHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOImageBase /<>/Modules/IO/ImageBase /<>/BUILD/Modules/IO/ImageBase 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/ImageBase /<>/BUILD /<>/BUILD/Modules/IO/ImageBase /<>/BUILD/Modules/IO/ImageBase/CMakeFiles/ITKIOImageBaseHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOImageBaseHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/ImageBase/CMakeFiles/ITKIOImageBaseHeaderTest1.dir/build.make Modules/IO/ImageBase/CMakeFiles/ITKIOImageBaseHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/ImageBase/CMakeFiles/ITKIOImageBaseHeaderTest1.dir/test/ITKIOImageBaseHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK/src && /usr/bin/c++ -DITKIOVTK_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOVTK.dir/itkVTKImageIOFactory.cxx.o -c /<>/Modules/IO/VTK/src/itkVTKImageIOFactory.cxx In file included from /<>/Modules/IO/VTK/src/itkVTKImageIOFactory.cxx:28: In file included from /<>/Modules/IO/VTK/include/itkVTKImageIOFactory.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/VTK/src/CMakeFiles/ITKIOVTK.dir/itkVTKImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/src && /usr/bin/c++ -DITKIOMeta_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMeta.dir/itkMetaImageIOFactory.cxx.o -c /<>/Modules/IO/Meta/src/itkMetaImageIOFactory.cxx In file included from /<>/Modules/IO/Meta/src/itkMetaImageIOFactory.cxx:18: In file included from /<>/Modules/IO/Meta/include/itkMetaImageIOFactory.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/src && /usr/bin/c++ -DITKSpatialObjects_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKSpatialObjects.dir/itkMetaEvent.cxx.o -c /<>/Modules/Core/SpatialObjects/src/itkMetaEvent.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOMeta-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/itkCylinderSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOMeta.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOMeta-4.12.so.1 -o ../../../../lib/libITKIOMeta-4.12.so.1 CMakeFiles/ITKIOMeta.dir/itkMetaArrayWriter.cxx.o CMakeFiles/ITKIOMeta.dir/itkMetaImageIO.cxx.o CMakeFiles/ITKIOMeta.dir/itkMetaArrayReader.cxx.o CMakeFiles/ITKIOMeta.dir/itkMetaImageIOFactory.cxx.o ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 -lz ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOMeta make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/ImageBase/test/CMakeFiles/FileFreeTestLib.dir/build.make Modules/IO/ImageBase/test/CMakeFiles/FileFreeTestLib.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/ImageBase/test /<>/BUILD /<>/BUILD/Modules/IO/ImageBase/test /<>/BUILD/Modules/IO/ImageBase/test/CMakeFiles/FileFreeTestLib.dir/DependInfo.cmake --color= Scanning dependencies of target FileFreeTestLib make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/ImageBase/test/CMakeFiles/FileFreeTestLib.dir/build.make Modules/IO/ImageBase/test/CMakeFiles/FileFreeTestLib.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/FileFreeTestLib.dir/itkFileFreeImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/src && /usr/bin/c++ -DITKIOTIFF_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/usr/include/x86_64-linux-gnu -I/<>/Modules/IO/TIFF/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTIFF.dir/itkTIFFImageIO.cxx.o -c /<>/Modules/IO/TIFF/src/itkTIFFImageIO.cxx In file included from /<>/Modules/IO/TIFF/src/itkTIFFImageIO.cxx:19: In file included from /<>/Modules/IO/TIFF/include/itkTIFFImageIO.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/TIFF/src/CMakeFiles/ITKIOTIFF.dir/itkTIFFReaderInternal.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/src && /usr/bin/c++ -DITKIOTIFF_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/usr/include/x86_64-linux-gnu -I/<>/Modules/IO/TIFF/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTIFF.dir/itkTIFFReaderInternal.cxx.o -c /<>/Modules/IO/TIFF/src/itkTIFFReaderInternal.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/TIFF/src/CMakeFiles/ITKIOTIFF.dir/itkTIFFImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase && /usr/bin/c++ -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseHeaderTest1.dir/test/ITKIOImageBaseHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/ImageBase/test/ITKIOImageBaseHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/ImageBase/test/ITKIOImageBaseHeaderTest1.cxx:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageSeriesReader.hxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageSeriesReader.h:26: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIOImageBaseHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOImageBaseHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOImageBaseHeaderTest1.dir/test/ITKIOImageBaseHeaderTest1.cxx.o -o ../../../bin/ITKIOImageBaseHeaderTest1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOImageBaseHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/BMP/CMakeFiles/ITKIOBMPHeaderTest1.dir/build.make Modules/IO/BMP/CMakeFiles/ITKIOBMPHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIOBMPHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOBMP /<>/Modules/IO/BMP /<>/BUILD/Modules/IO/BMP 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BMP /<>/BUILD /<>/BUILD/Modules/IO/BMP /<>/BUILD/Modules/IO/BMP/CMakeFiles/ITKIOBMPHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBMPHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/BMP/CMakeFiles/ITKIOBMPHeaderTest1.dir/build.make Modules/IO/BMP/CMakeFiles/ITKIOBMPHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/BMP/CMakeFiles/ITKIOBMPHeaderTest1.dir/test/ITKIOBMPHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -DFileFreeTestLib_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/FileFreeTestLib.dir/itkFileFreeImageIO.cxx.o -c /<>/Modules/IO/ImageBase/test/itkFileFreeImageIO.cxx In file included from /<>/Modules/IO/ImageBase/test/itkFileFreeImageIO.cxx:18: In file included from /<>/Modules/IO/ImageBase/test/itkFileFreeImageIO.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/FileFreeTestLib.dir/itkFileFreeImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK/src && /usr/bin/c++ -DITKIOVTK_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOVTK.dir/itkVTKImageIO.cxx.o -c /<>/Modules/IO/VTK/src/itkVTKImageIO.cxx In file included from /<>/Modules/IO/VTK/src/itkVTKImageIO.cxx:18: In file included from /<>/Modules/IO/VTK/include/itkVTKImageIO.h:34: In file included from /<>/Modules/IO/ImageBase/include/itkStreamingImageIOBase.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOVTK-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP && /usr/bin/c++ -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/BMP/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOBMPHeaderTest1.dir/test/ITKIOBMPHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/BMP/test/ITKIOBMPHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/BMP/test/ITKIOBMPHeaderTest1.cxx:23: In file included from /<>/Modules/IO/BMP/include/itkBMPImageIOFactory.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIOBMPHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/src && /usr/bin/c++ -DITKIOTIFF_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/usr/include/x86_64-linux-gnu -I/<>/Modules/IO/TIFF/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTIFF.dir/itkTIFFImageIOFactory.cxx.o -c /<>/Modules/IO/TIFF/src/itkTIFFImageIOFactory.cxx In file included from /<>/Modules/IO/TIFF/src/itkTIFFImageIOFactory.cxx:18: In file included from /<>/Modules/IO/TIFF/include/itkTIFFImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOTIFF-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOBMPHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOBMPHeaderTest1.dir/test/ITKIOBMPHeaderTest1.cxx.o -o ../../../bin/ITKIOBMPHeaderTest1 ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOBMPHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/GIPL/CMakeFiles/ITKIOGIPLHeaderTest1.dir/build.make Modules/IO/GIPL/CMakeFiles/ITKIOGIPLHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOVTK.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOVTK-4.12.so.1 -o ../../../../lib/libITKIOVTK-4.12.so.1 CMakeFiles/ITKIOVTK.dir/itkVTKImageIOFactory.cxx.o CMakeFiles/ITKIOVTK.dir/itkVTKImageIO.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIOGIPLHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GIPL && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOGIPL /<>/Modules/IO/GIPL /<>/BUILD/Modules/IO/GIPL 35 1 make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOVTK make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/JPEG/CMakeFiles/ITKIOJPEGHeaderTest1.dir/build.make Modules/IO/JPEG/CMakeFiles/ITKIOJPEGHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GIPL /<>/BUILD /<>/BUILD/Modules/IO/GIPL /<>/BUILD/Modules/IO/GIPL/CMakeFiles/ITKIOGIPLHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGIPLHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GIPL/CMakeFiles/ITKIOGIPLHeaderTest1.dir/build.make Modules/IO/GIPL/CMakeFiles/ITKIOGIPLHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIOJPEGHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTIFF.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOTIFF-4.12.so.1 -o ../../../../lib/libITKIOTIFF-4.12.so.1 CMakeFiles/ITKIOTIFF.dir/itkTIFFImageIO.cxx.o CMakeFiles/ITKIOTIFF.dir/itkTIFFReaderInternal.cxx.o CMakeFiles/ITKIOTIFF.dir/itkTIFFImageIOFactory.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 -ltiff ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/GIPL/CMakeFiles/ITKIOGIPLHeaderTest1.dir/test/ITKIOGIPLHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/JPEG && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOJPEG /<>/Modules/IO/JPEG /<>/BUILD/Modules/IO/JPEG 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOTIFF make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Meta/CMakeFiles/ITKIOMetaHeaderTest1.dir/build.make Modules/IO/Meta/CMakeFiles/ITKIOMetaHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/JPEG /<>/BUILD /<>/BUILD/Modules/IO/JPEG /<>/BUILD/Modules/IO/JPEG/CMakeFiles/ITKIOJPEGHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOJPEGHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/JPEG/CMakeFiles/ITKIOJPEGHeaderTest1.dir/build.make Modules/IO/JPEG/CMakeFiles/ITKIOJPEGHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIOMetaHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/JPEG/CMakeFiles/ITKIOJPEGHeaderTest1.dir/test/ITKIOJPEGHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOMeta /<>/Modules/IO/Meta /<>/BUILD/Modules/IO/Meta 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Meta /<>/BUILD /<>/BUILD/Modules/IO/Meta /<>/BUILD/Modules/IO/Meta/CMakeFiles/ITKIOMetaHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMetaHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Meta/CMakeFiles/ITKIOMetaHeaderTest1.dir/build.make Modules/IO/Meta/CMakeFiles/ITKIOMetaHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Meta/CMakeFiles/ITKIOMetaHeaderTest1.dir/test/ITKIOMetaHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GIPL && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GIPL/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGIPLHeaderTest1.dir/test/ITKIOGIPLHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/GIPL/test/ITKIOGIPLHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/GIPL/test/ITKIOGIPLHeaderTest1.cxx:23: In file included from /<>/Modules/IO/GIPL/include/itkGiplImageIO.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIOGIPLHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/JPEG && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/JPEG/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOJPEGHeaderTest1.dir/test/ITKIOJPEGHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/JPEG/test/ITKIOJPEGHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/JPEG/test/ITKIOJPEGHeaderTest1.cxx:23: In file included from /<>/Modules/IO/JPEG/include/itkJPEGImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIOJPEGHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -DFileFreeTestLib_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/FileFreeTestLib.dir/itkFileFreeImageIOFactory.cxx.o -c /<>/Modules/IO/ImageBase/test/itkFileFreeImageIOFactory.cxx In file included from /<>/Modules/IO/ImageBase/test/itkFileFreeImageIOFactory.cxx:19: In file included from /<>/Modules/IO/ImageBase/test/itkFileFreeImageIO.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared module ../../../../Testing/Temporary/libFileFreeTestLib.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GIPL && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOGIPLHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOGIPLHeaderTest1.dir/test/ITKIOGIPLHeaderTest1.cxx.o -o ../../../bin/ITKIOGIPLHeaderTest1 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOGIPLHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/NIFTI/CMakeFiles/ITKIONIFTIHeaderTest1.dir/build.make Modules/IO/NIFTI/CMakeFiles/ITKIONIFTIHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIONIFTIHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIONIFTI /<>/Modules/IO/NIFTI /<>/BUILD/Modules/IO/NIFTI 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NIFTI /<>/BUILD /<>/BUILD/Modules/IO/NIFTI /<>/BUILD/Modules/IO/NIFTI/CMakeFiles/ITKIONIFTIHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONIFTIHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/NIFTI/CMakeFiles/ITKIONIFTIHeaderTest1.dir/build.make Modules/IO/NIFTI/CMakeFiles/ITKIONIFTIHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/NIFTI/CMakeFiles/ITKIONIFTIHeaderTest1.dir/test/ITKIONIFTIHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/JPEG && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOJPEGHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOJPEGHeaderTest1.dir/test/ITKIOJPEGHeaderTest1.cxx.o -o ../../../bin/ITKIOJPEGHeaderTest1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOJPEGHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/NRRD/CMakeFiles/ITKIONRRDHeaderTest1.dir/build.make Modules/IO/NRRD/CMakeFiles/ITKIONRRDHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIONRRDHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileFreeTestLib.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../../Testing/Temporary/libFileFreeTestLib.so CMakeFiles/FileFreeTestLib.dir/itkFileFreeImageIO.cxx.o CMakeFiles/FileFreeTestLib.dir/itkFileFreeImageIOFactory.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target FileFreeTestLib make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/PNG/CMakeFiles/ITKIOPNGHeaderTest1.dir/build.make Modules/IO/PNG/CMakeFiles/ITKIOPNGHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIONRRD /<>/Modules/IO/NRRD /<>/BUILD/Modules/IO/NRRD 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIOPNGHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NRRD /<>/BUILD /<>/BUILD/Modules/IO/NRRD /<>/BUILD/Modules/IO/NRRD/CMakeFiles/ITKIONRRDHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONRRDHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/NRRD/CMakeFiles/ITKIONRRDHeaderTest1.dir/build.make Modules/IO/NRRD/CMakeFiles/ITKIONRRDHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/PNG && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOPNG /<>/Modules/IO/PNG /<>/BUILD/Modules/IO/PNG 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/NRRD/CMakeFiles/ITKIONRRDHeaderTest1.dir/test/ITKIONRRDHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/PNG /<>/BUILD /<>/BUILD/Modules/IO/PNG /<>/BUILD/Modules/IO/PNG/CMakeFiles/ITKIOPNGHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOPNGHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/PNG/CMakeFiles/ITKIOPNGHeaderTest1.dir/build.make Modules/IO/PNG/CMakeFiles/ITKIOPNGHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/PNG/CMakeFiles/ITKIOPNGHeaderTest1.dir/test/ITKIOPNGHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaHeaderTest1.dir/test/ITKIOMetaHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/Meta/test/ITKIOMetaHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/Meta/test/ITKIOMetaHeaderTest1.cxx:23: In file included from /<>/Modules/IO/Meta/include/itkMetaImageIOFactory.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIOMetaHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOMetaHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOMetaHeaderTest1.dir/test/ITKIOMetaHeaderTest1.cxx.o -o ../../../bin/ITKIOMetaHeaderTest1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOMetaHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TIFF/CMakeFiles/ITKIOTIFFHeaderTest1.dir/build.make Modules/IO/TIFF/CMakeFiles/ITKIOTIFFHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIOTIFFHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOTIFF /<>/Modules/IO/TIFF /<>/BUILD/Modules/IO/TIFF 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TIFF /<>/BUILD /<>/BUILD/Modules/IO/TIFF /<>/BUILD/Modules/IO/TIFF/CMakeFiles/ITKIOTIFFHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTIFFHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TIFF/CMakeFiles/ITKIOTIFFHeaderTest1.dir/build.make Modules/IO/TIFF/CMakeFiles/ITKIOTIFFHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/TIFF/CMakeFiles/ITKIOTIFFHeaderTest1.dir/test/ITKIOTIFFHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTIHeaderTest1.dir/test/ITKIONIFTIHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/NIFTI/test/ITKIONIFTIHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/NIFTI/test/ITKIONIFTIHeaderTest1.cxx:23: In file included from /<>/Modules/IO/NIFTI/include/itkNiftiImageIO.h:25: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIONIFTIHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIONIFTIHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIONIFTIHeaderTest1.dir/test/ITKIONIFTIHeaderTest1.cxx.o -o ../../../bin/ITKIONIFTIHeaderTest1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIONIFTIHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/VTK/CMakeFiles/ITKIOVTKHeaderTest1.dir/build.make Modules/IO/VTK/CMakeFiles/ITKIOVTKHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NRRD/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDHeaderTest1.dir/test/ITKIONRRDHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/NRRD/test/ITKIONRRDHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/NRRD/test/ITKIONRRDHeaderTest1.cxx:23: In file included from /<>/Modules/IO/NRRD/include/itkNrrdImageIO.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIOVTKHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIONRRDHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOVTK /<>/Modules/IO/VTK /<>/BUILD/Modules/IO/VTK 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/PNG && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/PNG/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOPNGHeaderTest1.dir/test/ITKIOPNGHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/PNG/test/ITKIOPNGHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/PNG/test/ITKIOPNGHeaderTest1.cxx:23: In file included from /<>/Modules/IO/PNG/include/itkPNGImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/VTK /<>/BUILD /<>/BUILD/Modules/IO/VTK /<>/BUILD/Modules/IO/VTK/CMakeFiles/ITKIOVTKHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOVTKHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/VTK/CMakeFiles/ITKIOVTKHeaderTest1.dir/build.make Modules/IO/VTK/CMakeFiles/ITKIOVTKHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/VTK/CMakeFiles/ITKIOVTKHeaderTest1.dir/test/ITKIOVTKHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIOPNGHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/usr/include/x86_64-linux-gnu -I/<>/Modules/IO/TIFF/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTIFFHeaderTest1.dir/test/ITKIOTIFFHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/TIFF/test/ITKIOTIFFHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/TIFF/test/ITKIOTIFFHeaderTest1.cxx:23: In file included from /<>/Modules/IO/TIFF/include/itkTIFFImageIO.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIONRRDHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIONRRDHeaderTest1.dir/test/ITKIONRRDHeaderTest1.cxx.o -o ../../../bin/ITKIONRRDHeaderTest1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIONRRDHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest1.dir/build.make Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIOTIFFHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/VTK/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOVTKHeaderTest1.dir/test/ITKIOVTKHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/VTK/test/ITKIOVTKHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKLabelMapHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/PNG && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOPNGHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOPNGHeaderTest1.dir/test/ITKIOPNGHeaderTest1.cxx.o -o ../../../bin/ITKIOPNGHeaderTest1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIOVTKHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKLabelMap /<>/Modules/Filtering/LabelMap /<>/BUILD/Modules/Filtering/LabelMap 35 1 make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOPNGHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest3.dir/build.make Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest3.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKLabelMapHeaderTest3.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKLabelMap /<>/Modules/Filtering/LabelMap /<>/BUILD/Modules/Filtering/LabelMap 35 3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTIFFHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOTIFFHeaderTest1.dir/test/ITKIOTIFFHeaderTest1.cxx.o -o ../../../bin/ITKIOTIFFHeaderTest1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/LabelMap /<>/BUILD /<>/BUILD/Modules/Filtering/LabelMap /<>/BUILD/Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelMapHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest1.dir/build.make Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/LabelMap /<>/BUILD /<>/BUILD/Modules/Filtering/LabelMap /<>/BUILD/Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest3.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelMapHeaderTest3 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest3.dir/build.make Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest3.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOVTKHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOVTKHeaderTest1.dir/test/ITKIOVTKHeaderTest1.cxx.o -o ../../../bin/ITKIOVTKHeaderTest1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOTIFFHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest2.dir/build.make Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest3.dir/test/ITKLabelMapHeaderTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOVTKHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/build.make Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKLabelMapHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest1.dir/test/ITKLabelMapHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKLabelMap /<>/Modules/Filtering/LabelMap /<>/BUILD/Modules/Filtering/LabelMap 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/LabelMap /<>/BUILD /<>/BUILD/Modules/Filtering/LabelMap /<>/BUILD/Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelMapHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest2.dir/build.make Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Mesh/src /<>/BUILD /<>/BUILD/Modules/IO/Mesh/src /<>/BUILD/Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMesh make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/build.make Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/src && /usr/bin/c++ -DITKSpatialObjects_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKSpatialObjects.dir/itkCylinderSpatialObject.cxx.o -c /<>/Modules/Core/SpatialObjects/src/itkCylinderSpatialObject.cxx In file included from /<>/Modules/Core/SpatialObjects/src/itkCylinderSpatialObject.cxx:18: In file included from /<>/Modules/Core/SpatialObjects/include/itkCylinderSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMapHeaderTest2.dir/test/ITKLabelMapHeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/itkSpatialObjectFactoryBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkMeshFileReaderException.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkMeshFileReaderException.cxx.o -c /<>/Modules/IO/Mesh/src/itkMeshFileReaderException.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkMeshFileWriterException.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkMeshFileWriterException.cxx.o -c /<>/Modules/IO/Mesh/src/itkMeshFileWriterException.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkBYUMeshIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapHeaderTest3.dir/test/ITKLabelMapHeaderTest3.cxx.o -c /<>/BUILD/Modules/Filtering/LabelMap/test/ITKLabelMapHeaderTest3.cxx In file included from /<>/BUILD/Modules/Filtering/LabelMap/test/ITKLabelMapHeaderTest3.cxx:23: In file included from /<>/Modules/Filtering/LabelMap/include/itkAttributePositionLabelMapFilter.hxx:21: In file included from /<>/Modules/Filtering/LabelMap/include/itkAttributePositionLabelMapFilter.h:21: In file included from /<>/Modules/Filtering/LabelMap/include/itkInPlaceLabelMapFilter.h:31: In file included from /<>/Modules/Filtering/LabelMap/include/itkLabelMapFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKLabelMapHeaderTest3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLabelMapHeaderTest3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKLabelMapHeaderTest3.dir/test/ITKLabelMapHeaderTest3.cxx.o -o ../../../bin/ITKLabelMapHeaderTest3 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKLabelMapHeaderTest3 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/XML/src/CMakeFiles/ITKIOXML.dir/build.make Modules/IO/XML/src/CMakeFiles/ITKIOXML.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/XML/src /<>/BUILD /<>/BUILD/Modules/IO/XML/src /<>/BUILD/Modules/IO/XML/src/CMakeFiles/ITKIOXML.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOXML make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/XML/src/CMakeFiles/ITKIOXML.dir/build.make Modules/IO/XML/src/CMakeFiles/ITKIOXML.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/XML/src/CMakeFiles/ITKIOXML.dir/itkXMLFile.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapHeaderTest1.dir/test/ITKLabelMapHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/LabelMap/test/ITKLabelMapHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/LabelMap/test/ITKLabelMapHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/LabelMap/include/itkBinaryFillholeImageFilter.hxx:21: In file included from /<>/Modules/Filtering/LabelMap/include/itkBinaryFillholeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKLabelMapHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLabelMapHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKLabelMapHeaderTest1.dir/test/ITKLabelMapHeaderTest1.cxx.o -o ../../../bin/ITKLabelMapHeaderTest1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKLabelMapHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/QuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshHeaderTest1.dir/build.make Modules/Core/QuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKQuadEdgeMeshHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKQuadEdgeMesh /<>/Modules/Core/QuadEdgeMesh /<>/BUILD/Modules/Core/QuadEdgeMesh 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/QuadEdgeMesh /<>/BUILD /<>/BUILD/Modules/Core/QuadEdgeMesh /<>/BUILD/Modules/Core/QuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMeshHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/QuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshHeaderTest1.dir/build.make Modules/Core/QuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Core/QuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshHeaderTest1.dir/test/ITKQuadEdgeMeshHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapHeaderTest2.dir/test/ITKLabelMapHeaderTest2.cxx.o -c /<>/BUILD/Modules/Filtering/LabelMap/test/ITKLabelMapHeaderTest2.cxx In file included from /<>/BUILD/Modules/Filtering/LabelMap/test/ITKLabelMapHeaderTest2.cxx:23: In file included from /<>/Modules/Filtering/LabelMap/include/itkStatisticsPositionLabelMapFilter.hxx:21: In file included from /<>/Modules/Filtering/LabelMap/include/itkStatisticsPositionLabelMapFilter.h:21: In file included from /<>/Modules/Filtering/LabelMap/include/itkShapePositionLabelMapFilter.h:21: In file included from /<>/Modules/Filtering/LabelMap/include/itkInPlaceLabelMapFilter.h:31: In file included from /<>/Modules/Filtering/LabelMap/include/itkLabelMapFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKLabelMapHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLabelMapHeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKLabelMapHeaderTest2.dir/test/ITKLabelMapHeaderTest2.cxx.o -o ../../../bin/ITKLabelMapHeaderTest2 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKLabelMapHeaderTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizers/CMakeFiles/ITKOptimizersHeaderTest1.dir/build.make Modules/Numerics/Optimizers/CMakeFiles/ITKOptimizersHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKOptimizersHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKOptimizers /<>/Modules/Numerics/Optimizers /<>/BUILD/Modules/Numerics/Optimizers 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizers /<>/BUILD /<>/BUILD/Modules/Numerics/Optimizers /<>/BUILD/Modules/Numerics/Optimizers/CMakeFiles/ITKOptimizersHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizersHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizers/CMakeFiles/ITKOptimizersHeaderTest1.dir/build.make Modules/Numerics/Optimizers/CMakeFiles/ITKOptimizersHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Numerics/Optimizers/CMakeFiles/ITKOptimizersHeaderTest1.dir/test/ITKOptimizersHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/src && /usr/bin/c++ -DITKIOXML_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOXML.dir/itkXMLFile.cxx.o -c /<>/Modules/IO/XML/src/itkXMLFile.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/XML/src/CMakeFiles/ITKIOXML.dir/itkDOMNode.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshHeaderTest1.dir/test/ITKQuadEdgeMeshHeaderTest1.cxx.o -c /<>/BUILD/Modules/Core/QuadEdgeMesh/test/ITKQuadEdgeMeshHeaderTest1.cxx In file included from /<>/BUILD/Modules/Core/QuadEdgeMesh/test/ITKQuadEdgeMeshHeaderTest1.cxx:25: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.hxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKQuadEdgeMeshHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKQuadEdgeMeshHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKQuadEdgeMeshHeaderTest1.dir/test/ITKQuadEdgeMeshHeaderTest1.cxx.o -o ../../../bin/ITKQuadEdgeMeshHeaderTest1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKQuadEdgeMeshHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/BioCell/CMakeFiles/ITKBioCellHeaderTest1.dir/build.make Modules/Segmentation/BioCell/CMakeFiles/ITKBioCellHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKBioCellHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKBioCell /<>/Modules/Segmentation/BioCell /<>/BUILD/Modules/Segmentation/BioCell 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersHeaderTest1.dir/test/ITKOptimizersHeaderTest1.cxx.o -c /<>/BUILD/Modules/Numerics/Optimizers/test/ITKOptimizersHeaderTest1.cxx In file included from /<>/BUILD/Modules/Numerics/Optimizers/test/ITKOptimizersHeaderTest1.cxx:23: In file included from /<>/Modules/Numerics/Optimizers/include/itkVersorRigid3DTransformOptimizer.h:22: In file included from /<>/Modules/Core/Common/include/itkVersor.h:21: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/BioCell /<>/BUILD /<>/BUILD/Modules/Segmentation/BioCell /<>/BUILD/Modules/Segmentation/BioCell/CMakeFiles/ITKBioCellHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBioCellHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/BioCell/CMakeFiles/ITKBioCellHeaderTest1.dir/build.make Modules/Segmentation/BioCell/CMakeFiles/ITKBioCellHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Segmentation/BioCell/CMakeFiles/ITKBioCellHeaderTest1.dir/test/ITKBioCellHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKOptimizersHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKOptimizersHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKOptimizersHeaderTest1.dir/test/ITKOptimizersHeaderTest1.cxx.o -o ../../../bin/ITKOptimizersHeaderTest1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKOptimizersHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/LSM/src/CMakeFiles/ITKIOLSM.dir/build.make Modules/IO/LSM/src/CMakeFiles/ITKIOLSM.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/LSM/src /<>/BUILD /<>/BUILD/Modules/IO/LSM/src /<>/BUILD/Modules/IO/LSM/src/CMakeFiles/ITKIOLSM.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOLSM make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/LSM/src/CMakeFiles/ITKIOLSM.dir/build.make Modules/IO/LSM/src/CMakeFiles/ITKIOLSM.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/LSM/src/CMakeFiles/ITKIOLSM.dir/itkLSMImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkBYUMeshIO.cxx.o -c /<>/Modules/IO/Mesh/src/itkBYUMeshIO.cxx In file included from /<>/Modules/IO/Mesh/src/itkBYUMeshIO.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkBYUMeshIO.h:23: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkBYUMeshIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/BioCell/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBioCellHeaderTest1.dir/test/ITKBioCellHeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/BioCell/test/ITKBioCellHeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/BioCell/test/ITKBioCellHeaderTest1.cxx:24: In file included from /<>/Modules/Segmentation/BioCell/include/itkBioCellBase.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKBioCellHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKBioCellHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKBioCellHeaderTest1.dir/test/ITKBioCellHeaderTest1.cxx.o -o ../../../bin/ITKBioCellHeaderTest1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKBioCellHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/BioRad/CMakeFiles/ITKIOBioRadHeaderTest1.dir/build.make Modules/IO/BioRad/CMakeFiles/ITKIOBioRadHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIOBioRadHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BioRad && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOBioRad /<>/Modules/IO/BioRad /<>/BUILD/Modules/IO/BioRad 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BioRad /<>/BUILD /<>/BUILD/Modules/IO/BioRad /<>/BUILD/Modules/IO/BioRad/CMakeFiles/ITKIOBioRadHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBioRadHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/BioRad/CMakeFiles/ITKIOBioRadHeaderTest1.dir/build.make Modules/IO/BioRad/CMakeFiles/ITKIOBioRadHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/BioRad/CMakeFiles/ITKIOBioRadHeaderTest1.dir/test/ITKIOBioRadHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/src && /usr/bin/c++ -DITKIOXML_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOXML.dir/itkDOMNode.cxx.o -c /<>/Modules/IO/XML/src/itkDOMNode.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/XML/src/CMakeFiles/ITKIOXML.dir/itkDOMNodeXMLReader.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/LSM/src && /usr/bin/c++ -DITKIOLSM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/TIFF/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/usr/include/x86_64-linux-gnu -I/<>/Modules/IO/LSM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOLSM.dir/itkLSMImageIOFactory.cxx.o -c /<>/Modules/IO/LSM/src/itkLSMImageIOFactory.cxx In file included from /<>/Modules/IO/LSM/src/itkLSMImageIOFactory.cxx:28: In file included from /<>/Modules/IO/LSM/include/itkLSMImageIOFactory.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/LSM/src/CMakeFiles/ITKIOLSM.dir/itkLSMImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkBYUMeshIOFactory.cxx.o -c /<>/Modules/IO/Mesh/src/itkBYUMeshIOFactory.cxx In file included from /<>/Modules/IO/Mesh/src/itkBYUMeshIOFactory.cxx:18: In file included from /<>/Modules/IO/Mesh/include/itkBYUMeshIOFactory.h:22: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkFreeSurferAsciiMeshIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BioRad && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/BioRad/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOBioRadHeaderTest1.dir/test/ITKIOBioRadHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/BioRad/test/ITKIOBioRadHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/BioRad/test/ITKIOBioRadHeaderTest1.cxx:23: In file included from /<>/Modules/IO/BioRad/include/itkBioRadImageIOFactory.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIOBioRadHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BioRad && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOBioRadHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOBioRadHeaderTest1.dir/test/ITKIOBioRadHeaderTest1.cxx.o -o ../../../bin/ITKIOBioRadHeaderTest1 ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOBioRadHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Stimulate/CMakeFiles/ITKIOStimulateHeaderTest1.dir/build.make Modules/IO/Stimulate/CMakeFiles/ITKIOStimulateHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIOStimulateHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Stimulate && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOStimulate /<>/Modules/IO/Stimulate /<>/BUILD/Modules/IO/Stimulate 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Stimulate /<>/BUILD /<>/BUILD/Modules/IO/Stimulate /<>/BUILD/Modules/IO/Stimulate/CMakeFiles/ITKIOStimulateHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOStimulateHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Stimulate/CMakeFiles/ITKIOStimulateHeaderTest1.dir/build.make Modules/IO/Stimulate/CMakeFiles/ITKIOStimulateHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/src && /usr/bin/c++ -DITKIOXML_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOXML.dir/itkDOMNodeXMLReader.cxx.o -c /<>/Modules/IO/XML/src/itkDOMNodeXMLReader.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/XML/src/CMakeFiles/ITKIOXML.dir/itkDOMNodeXMLWriter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Stimulate/CMakeFiles/ITKIOStimulateHeaderTest1.dir/test/ITKIOStimulateHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/src && /usr/bin/c++ -DITKSpatialObjects_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKSpatialObjects.dir/itkSpatialObjectFactoryBase.cxx.o -c /<>/Modules/Core/SpatialObjects/src/itkSpatialObjectFactoryBase.cxx In file included from /<>/Modules/Core/SpatialObjects/src/itkSpatialObjectFactoryBase.cxx:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkGroupSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/Core/SpatialObjects/src/CMakeFiles/ITKSpatialObjects.dir/itkArrowSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/LSM/src && /usr/bin/c++ -DITKIOLSM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/TIFF/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/usr/include/x86_64-linux-gnu -I/<>/Modules/IO/LSM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOLSM.dir/itkLSMImageIO.cxx.o -c /<>/Modules/IO/LSM/src/itkLSMImageIO.cxx In file included from /<>/Modules/IO/LSM/src/itkLSMImageIO.cxx:28: In file included from /<>/Modules/IO/LSM/include/itkLSMImageIO.h:32: In file included from /<>/Modules/IO/TIFF/include/itkTIFFImageIO.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKIOLSM-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/LSM/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOLSM.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOLSM-4.12.so.1 -o ../../../../lib/libITKIOLSM-4.12.so.1 CMakeFiles/ITKIOLSM.dir/itkLSMImageIOFactory.cxx.o CMakeFiles/ITKIOLSM.dir/itkLSMImageIO.cxx.o ../../../../lib/libITKIOTIFF-4.12.so.1 -ltiff ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/LSM/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOLSM make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/CSV/CMakeFiles/ITKIOCSVHeaderTest1.dir/build.make Modules/IO/CSV/CMakeFiles/ITKIOCSVHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Stimulate && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/Stimulate/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOStimulateHeaderTest1.dir/test/ITKIOStimulateHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/Stimulate/test/ITKIOStimulateHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/Stimulate/test/ITKIOStimulateHeaderTest1.cxx:23: In file included from /<>/Modules/IO/Stimulate/include/itkStimulateImageIO.h:34: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIOCSVHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIOStimulateHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/CSV && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOCSV /<>/Modules/IO/CSV /<>/BUILD/Modules/IO/CSV 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/CSV /<>/BUILD /<>/BUILD/Modules/IO/CSV /<>/BUILD/Modules/IO/CSV/CMakeFiles/ITKIOCSVHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOCSVHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/CSV/CMakeFiles/ITKIOCSVHeaderTest1.dir/build.make Modules/IO/CSV/CMakeFiles/ITKIOCSVHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/CSV/CMakeFiles/ITKIOCSVHeaderTest1.dir/test/ITKIOCSVHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Stimulate && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOStimulateHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOStimulateHeaderTest1.dir/test/ITKIOStimulateHeaderTest1.cxx.o -o ../../../bin/ITKIOStimulateHeaderTest1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKIOStimulateHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/IPL/CMakeFiles/ITKIOIPLHeaderTest1.dir/build.make Modules/IO/IPL/CMakeFiles/ITKIOIPLHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 35%] Generating test/ITKIOIPLHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/IPL && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOIPL /<>/Modules/IO/IPL /<>/BUILD/Modules/IO/IPL 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/IPL /<>/BUILD /<>/BUILD/Modules/IO/IPL /<>/BUILD/Modules/IO/IPL/CMakeFiles/ITKIOIPLHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOIPLHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/IPL/CMakeFiles/ITKIOIPLHeaderTest1.dir/build.make Modules/IO/IPL/CMakeFiles/ITKIOIPLHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/IPL/CMakeFiles/ITKIOIPLHeaderTest1.dir/test/ITKIOIPLHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformFactory/src && /usr/bin/c++ -DITKTransformFactory_EXPORTS -DITK_TRANSFORM_FACTORY_MAX_DIM=4 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKTransformFactory.dir/itkTransformFactoryBaseRegisterDoubleParameters.cxx.o -c /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegisterDoubleParameters.cxx In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegisterDoubleParameters.cxx:18: In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegister.hxx:23: In file included from /<>/Modules/Core/Transform/include/itkAzimuthElevationToCartesianTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegisterDoubleParameters.cxx:18: In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegister.hxx:25: In file included from /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:38:10: note: in instantiation of template class 'itk::Euler3DTransform' requested here public Euler3DTransform ^ /<>/Modules/IO/TransformFactory/include/itkTransformFactory.h:46:14: note: in instantiation of template class 'itk::CenteredEuler3DTransform' requested here typename T::Pointer t = T::New(); ^ /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegister.hxx:117:66: note: in instantiation of member function 'itk::TransformFactory >::RegisterTransform' requested here TransformFactory< CenteredEuler3DTransform >::RegisterTransform (); ^ /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegisterDoubleParameters.cxx:28:9: note: in instantiation of function template specialization 'itk::TransformFactoryBase::RegisterTransformFactory' requested here Self::RegisterTransformFactory(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegisterDoubleParameters.cxx:18: In file included from /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegister.hxx:35: In file included from /<>/Modules/Core/Transform/include/itkScaleVersor3DTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/include/itkScaleSkewVersor3DTransform.h:55:10: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here public VersorRigid3DTransform ^ /<>/Modules/IO/TransformFactory/include/itkTransformFactory.h:46:14: note: in instantiation of template class 'itk::ScaleSkewVersor3DTransform' requested here typename T::Pointer t = T::New(); ^ /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegister.hxx:141:68: note: in instantiation of member function 'itk::TransformFactory >::RegisterTransform' requested here TransformFactory< ScaleSkewVersor3DTransform >::RegisterTransform (); ^ /<>/Modules/IO/TransformFactory/src/itkTransformFactoryBaseRegisterDoubleParameters.cxx:28:9: note: in instantiation of function template specialization 'itk::TransformFactoryBase::RegisterTransformFactory' requested here Self::RegisterTransformFactory(); ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX shared library ../../../../lib/libITKTransformFactory-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkFreeSurferAsciiMeshIO.cxx.o -c /<>/Modules/IO/Mesh/src/itkFreeSurferAsciiMeshIO.cxx In file included from /<>/Modules/IO/Mesh/src/itkFreeSurferAsciiMeshIO.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkFreeSurferAsciiMeshIO.h:23: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkFreeSurferAsciiMeshIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/src && /usr/bin/c++ -DITKIOXML_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOXML.dir/itkDOMNodeXMLWriter.cxx.o -c /<>/Modules/IO/XML/src/itkDOMNodeXMLWriter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/XML/src/CMakeFiles/ITKIOXML.dir/itkStringTools.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKTransform.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFilterBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKStatistics.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkCompositeTransform;itkTransformBase;itkMatrixOffsetTransformBase;itkEuler2DTransform;itkEuler3DTransform;itkMultiTransform;itkVersorTransform;itkVersorRigid3DTransform;itkSimilarity2DTransform;itkSimilarity3DTransform;itkAffineTransform;itkScalableAffineTransform;itkScaleTransform;itkKernelTransform;itkAzimuthElevationToCartesianTransform;itkBSplineBaseTransform;itkBSplineTransform;itkCenteredAffineTransform;itkCenteredEuler3DTransform;itkCenteredRigid2DTransform;itkCenteredSimilarity2DTransform;itkElasticBodyReciprocalSplineKernelTransform;itkElasticBodySplineKernelTransform;itkFixedCenterOfRotationAffineTransform;itkIdentityTransform;itkQuaternionRigidTransform;itkRigid2DTransform;itkRigid3DPerspectiveTransform;itkRigid3DTransform;itkScaleLogarithmicTransform;itkScaleSkewVersor3DTransform;itkScaleVersor3DTransform;itkThinPlateR2LogRSplineKernelTransform;itkThinPlateSplineKernelTransform;itkTranslationTransform;itkVolumeSplineKernelTransform" make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformFactory/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKTransformFactory.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKTransformFactory-4.12.so.1 -o ../../../../lib/libITKTransformFactory-4.12.so.1 CMakeFiles/ITKTransformFactory.dir/itkTransformFactoryBase.cxx.o CMakeFiles/ITKTransformFactory.dir/itkTransformFactoryBaseRegisterFloatParameters.cxx.o CMakeFiles/ITKTransformFactory.dir/itkTransformFactoryBaseRegisterDoubleParameters.cxx.o ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformFactory/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/CSV && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/CSV/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOCSVHeaderTest1.dir/test/ITKIOCSVHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/CSV/test/ITKIOCSVHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/CSV/test/ITKIOCSVHeaderTest1.cxx:23: In file included from /<>/Modules/IO/CSV/include/itkCSVNumericObjectFileWriter.hxx:21: In file included from /<>/Modules/IO/CSV/include/itkCSVNumericObjectFileWriter.h:27: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 35%] Built target ITKTransformFactory make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/src && /usr/bin/c++ -DITKIOGDCM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOGDCM.dir/itkGDCMImageIO.cxx.o -c /<>/Modules/IO/GDCM/src/itkGDCMImageIO.cxx In file included from /<>/Modules/IO/GDCM/src/itkGDCMImageIO.cxx:30: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIO.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIOCSVHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/GDCM/src/CMakeFiles/ITKIOGDCM.dir/itkGDCMImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/GDCM/src/CMakeFiles/ITKIOGDCM.dir/itkGDCMSeriesFileNames.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/CSV && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOCSVHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOCSVHeaderTest1.dir/test/ITKIOCSVHeaderTest1.cxx.o -o ../../../bin/ITKIOCSVHeaderTest1 ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/IPL && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/IPL/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOIPLHeaderTest1.dir/test/ITKIOIPLHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/IPL/test/ITKIOIPLHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/IPL/test/ITKIOIPLHeaderTest1.cxx:25: In file included from /<>/Modules/IO/IPL/include/itkIPLCommonImageIO.h:36: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Linking CXX executable ../../../bin/ITKIOIPLHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/IPL && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOIPLHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOIPLHeaderTest1.dir/test/ITKIOIPLHeaderTest1.cxx.o -o ../../../bin/ITKIOIPLHeaderTest1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkFreeSurferAsciiMeshIOFactory.cxx.o -c /<>/Modules/IO/Mesh/src/itkFreeSurferAsciiMeshIOFactory.cxx In file included from /<>/Modules/IO/Mesh/src/itkFreeSurferAsciiMeshIOFactory.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkFreeSurferAsciiMeshIO.h:23: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkFreeSurferBinaryMeshIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/src && /usr/bin/c++ -DITKIOXML_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOXML.dir/itkStringTools.cxx.o -c /<>/Modules/IO/XML/src/itkStringTools.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 35%] Building CXX object Modules/IO/XML/src/CMakeFiles/ITKIOXML.dir/itkFancyString.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/src && /usr/bin/c++ -DITKIOGDCM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOGDCM.dir/itkGDCMImageIOFactory.cxx.o -c /<>/Modules/IO/GDCM/src/itkGDCMImageIOFactory.cxx In file included from /<>/Modules/IO/GDCM/src/itkGDCMImageIOFactory.cxx:18: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Siemens/src/CMakeFiles/ITKIOSiemens.dir/build.make Modules/IO/Siemens/src/CMakeFiles/ITKIOSiemens.dir/depend make[2]: Entering directory '/<>/BUILD' [ 36%] Built target ITKTransformSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/build.make Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/depend make[2]: Entering directory '/<>/BUILD' [ 36%] Built target ITKIOCSVHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 36%] Built target ITKIOIPLHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/HDF5/CMakeFiles/ITKIOHDF5HeaderTest1.dir/build.make Modules/IO/HDF5/CMakeFiles/ITKIOHDF5HeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Siemens/src /<>/BUILD /<>/BUILD/Modules/IO/Siemens/src /<>/BUILD/Modules/IO/Siemens/src/CMakeFiles/ITKIOSiemens.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSiemens make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Siemens/src/CMakeFiles/ITKIOSiemens.dir/build.make Modules/IO/Siemens/src/CMakeFiles/ITKIOSiemens.dir/build make[3]: Entering directory '/<>/BUILD' [ 36%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkFreeSurferBinaryMeshIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 36%] Generating test/ITKIOHDF5HeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 36%] Building CXX object Modules/IO/Siemens/src/CMakeFiles/ITKIOSiemens.dir/itkSiemensVisionImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/HDF5 && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOHDF5 /<>/Modules/IO/HDF5 /<>/BUILD/Modules/IO/HDF5 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/src && /usr/bin/c++ -DITKIOXML_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOXML.dir/itkFancyString.cxx.o -c /<>/Modules/IO/XML/src/itkFancyString.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GE/src /<>/BUILD /<>/BUILD/Modules/IO/GE/src /<>/BUILD/Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGE make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/build.make Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/build make[3]: Entering directory '/<>/BUILD' [ 36%] Linking CXX shared library ../../../../lib/libITKIOXML-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 36%] Building CXX object Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/itkGE5ImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/HDF5 /<>/BUILD /<>/BUILD/Modules/IO/HDF5 /<>/BUILD/Modules/IO/HDF5/CMakeFiles/ITKIOHDF5HeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOHDF5HeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/HDF5/CMakeFiles/ITKIOHDF5HeaderTest1.dir/build.make Modules/IO/HDF5/CMakeFiles/ITKIOHDF5HeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 36%] Building CXX object Modules/IO/HDF5/CMakeFiles/ITKIOHDF5HeaderTest1.dir/test/ITKIOHDF5HeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOXML.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOXML-4.12.so.1 -o ../../../../lib/libITKIOXML-4.12.so.1 CMakeFiles/ITKIOXML.dir/itkXMLFile.cxx.o CMakeFiles/ITKIOXML.dir/itkDOMNode.cxx.o CMakeFiles/ITKIOXML.dir/itkDOMNodeXMLReader.cxx.o CMakeFiles/ITKIOXML.dir/itkDOMNodeXMLWriter.cxx.o CMakeFiles/ITKIOXML.dir/itkStringTools.cxx.o CMakeFiles/ITKIOXML.dir/itkFancyString.cxx.o ../../../../lib/libITKIOImageBase-4.12.so.1 -lexpat ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOXML-4.12.so.1 ../../../../lib/libITKIOXML-4.12.so.1 ../../../../lib/libITKIOXML-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 36%] Built target ITKIOXML make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/MRC/CMakeFiles/ITKIOMRCHeaderTest1.dir/build.make Modules/IO/MRC/CMakeFiles/ITKIOMRCHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 37%] Generating test/ITKIOMRCHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/MRC && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOMRC /<>/Modules/IO/MRC /<>/BUILD/Modules/IO/MRC 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/MRC /<>/BUILD /<>/BUILD/Modules/IO/MRC /<>/BUILD/Modules/IO/MRC/CMakeFiles/ITKIOMRCHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMRCHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/MRC/CMakeFiles/ITKIOMRCHeaderTest1.dir/build.make Modules/IO/MRC/CMakeFiles/ITKIOMRCHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/MRC/CMakeFiles/ITKIOMRCHeaderTest1.dir/test/ITKIOMRCHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/src && /usr/bin/c++ -DITKSpatialObjects_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKSpatialObjects.dir/itkArrowSpatialObject.cxx.o -c /<>/Modules/Core/SpatialObjects/src/itkArrowSpatialObject.cxx In file included from /<>/Modules/Core/SpatialObjects/src/itkArrowSpatialObject.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkArrowSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/SpatialObjects/src/itkArrowSpatialObject.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkArrowSpatialObject.h:145: In file included from /<>/Modules/Core/SpatialObjects/include/itkArrowSpatialObject.hxx:22: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Core/SpatialObjects/src/itkArrowSpatialObject.cxx:82:3: note: in instantiation of template class 'itk::Euler3DTransform' requested here EulerTransformType::Pointer euler = EulerTransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX shared library ../../../../lib/libITKSpatialObjects-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKSpatialObjects.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKSpatialObjects-4.12.so.1 -o ../../../../lib/libITKSpatialObjects-4.12.so.1 CMakeFiles/ITKSpatialObjects.dir/itkMetaEvent.cxx.o CMakeFiles/ITKSpatialObjects.dir/itkCylinderSpatialObject.cxx.o CMakeFiles/ITKSpatialObjects.dir/itkSpatialObjectFactoryBase.cxx.o CMakeFiles/ITKSpatialObjects.dir/itkArrowSpatialObject.cxx.o ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKSpatialObjects make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformFactory/CMakeFiles/ITKTransformFactoryHeaderTest1.dir/build.make Modules/IO/TransformFactory/CMakeFiles/ITKTransformFactoryHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 37%] Generating test/ITKTransformFactoryHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformFactory && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKTransformFactory /<>/Modules/IO/TransformFactory /<>/BUILD/Modules/IO/TransformFactory 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformFactory /<>/BUILD /<>/BUILD/Modules/IO/TransformFactory /<>/BUILD/Modules/IO/TransformFactory/CMakeFiles/ITKTransformFactoryHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTransformFactoryHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformFactory/CMakeFiles/ITKTransformFactoryHeaderTest1.dir/build.make Modules/IO/TransformFactory/CMakeFiles/ITKTransformFactoryHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/TransformFactory/CMakeFiles/ITKTransformFactoryHeaderTest1.dir/test/ITKTransformFactoryHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/src && /usr/bin/c++ -DITKIOGDCM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOGDCM.dir/itkGDCMSeriesFileNames.cxx.o -c /<>/Modules/IO/GDCM/src/itkGDCMSeriesFileNames.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX shared library ../../../../lib/libITKIOGDCM-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOGDCM.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOGDCM-4.12.so.1 -o ../../../../lib/libITKIOGDCM-4.12.so.1 CMakeFiles/ITKIOGDCM.dir/itkGDCMImageIO.cxx.o CMakeFiles/ITKIOGDCM.dir/itkGDCMImageIOFactory.cxx.o CMakeFiles/ITKIOGDCM.dir/itkGDCMSeriesFileNames.cxx.o /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 ../../../../lib/libITKIOImageBase-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/MRC && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/MRC/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMRCHeaderTest1.dir/test/ITKIOMRCHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/MRC/test/ITKIOMRCHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/MRC/test/ITKIOMRCHeaderTest1.cxx:24: In file included from /<>/Modules/IO/MRC/include/itkMRCImageIO.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkStreamingImageIOBase.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/HDF5 && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/HDF5/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOHDF5HeaderTest1.dir/test/ITKIOHDF5HeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/HDF5/test/ITKIOHDF5HeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/HDF5/test/ITKIOHDF5HeaderTest1.cxx:23: In file included from /<>/Modules/IO/HDF5/include/itkHDF5ImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX executable ../../../bin/ITKIOMRCHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKIOGDCM make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/build.make Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/depend make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX executable ../../../bin/ITKIOHDF5HeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformBase/src /<>/BUILD /<>/BUILD/Modules/IO/TransformBase/src /<>/BUILD/Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformBase make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/build.make Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE/src && /usr/bin/c++ -DITKIOGE_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/IPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/GE/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOGE.dir/itkGE5ImageIOFactory.cxx.o -c /<>/Modules/IO/GE/src/itkGE5ImageIOFactory.cxx In file included from /<>/Modules/IO/GE/src/itkGE5ImageIOFactory.cxx:18: In file included from /<>/Modules/IO/GE/include/itkGE5ImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/itkGEAdwImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkCompositeTransformIOHelper.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/MRC && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOMRCHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOMRCHeaderTest1.dir/test/ITKIOMRCHeaderTest1.cxx.o -o ../../../bin/ITKIOMRCHeaderTest1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/HDF5 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOHDF5HeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOHDF5HeaderTest1.dir/test/ITKIOHDF5HeaderTest1.cxx.o -o ../../../bin/ITKIOHDF5HeaderTest1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkFreeSurferBinaryMeshIOFactory.cxx.o -c /<>/Modules/IO/Mesh/src/itkFreeSurferBinaryMeshIOFactory.cxx In file included from /<>/Modules/IO/Mesh/src/itkFreeSurferBinaryMeshIOFactory.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkFreeSurferBinaryMeshIO.h:24: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKIOMRCHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/build.make Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkGiftiMeshIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKIOHDF5HeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFusion/CMakeFiles/ITKImageFusionHeaderTest1.dir/build.make Modules/Filtering/ImageFusion/CMakeFiles/ITKImageFusionHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 37%] Generating test/ITKImageFusionHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageFusion /<>/Modules/Filtering/ImageFusion /<>/BUILD/Modules/Filtering/ImageFusion 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFusion /<>/BUILD /<>/BUILD/Modules/Filtering/ImageFusion /<>/BUILD/Modules/Filtering/ImageFusion/CMakeFiles/ITKImageFusionHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFusionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFusion/CMakeFiles/ITKImageFusionHeaderTest1.dir/build.make Modules/Filtering/ImageFusion/CMakeFiles/ITKImageFusionHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageFusion/CMakeFiles/ITKImageFusionHeaderTest1.dir/test/ITKImageFusionHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformFactory && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformFactoryHeaderTest1.dir/test/ITKTransformFactoryHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/TransformFactory/test/ITKTransformFactoryHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Siemens/src && /usr/bin/c++ -DITKIOSiemens_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/IPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOSiemens.dir/itkSiemensVisionImageIOFactory.cxx.o -c /<>/Modules/IO/Siemens/src/itkSiemensVisionImageIOFactory.cxx In file included from /<>/Modules/IO/Siemens/src/itkSiemensVisionImageIOFactory.cxx:18: In file included from /<>/Modules/IO/Siemens/include/itkSiemensVisionImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX executable ../../../bin/ITKTransformFactoryHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/Siemens/src/CMakeFiles/ITKIOSiemens.dir/itkSiemensVisionImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFusion/test /<>/BUILD /<>/BUILD/Modules/Filtering/ImageFusion/test /<>/BUILD/Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFusionTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/build.make Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/ITKImageFusionTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformFactory && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKTransformFactoryHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKTransformFactoryHeaderTest1.dir/test/ITKTransformFactoryHeaderTest1.cxx.o -o ../../../bin/ITKTransformFactoryHeaderTest1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKTransformFactoryHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageNoise/test/CMakeFiles/ITKImageNoiseTestDriver.dir/build.make Modules/Filtering/ImageNoise/test/CMakeFiles/ITKImageNoiseTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageNoise/test /<>/BUILD /<>/BUILD/Modules/Filtering/ImageNoise/test /<>/BUILD/Modules/Filtering/ImageNoise/test/CMakeFiles/ITKImageNoiseTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageNoiseTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageNoise/test/CMakeFiles/ITKImageNoiseTestDriver.dir/build.make Modules/Filtering/ImageNoise/test/CMakeFiles/ITKImageNoiseTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageNoise/test/CMakeFiles/ITKImageNoiseTestDriver.dir/ITKImageNoiseTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkFreeSurferBinaryMeshIO.cxx.o -c /<>/Modules/IO/Mesh/src/itkFreeSurferBinaryMeshIO.cxx In file included from /<>/Modules/IO/Mesh/src/itkFreeSurferBinaryMeshIO.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkFreeSurferBinaryMeshIO.h:24: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkGiftiMeshIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionHeaderTest1.dir/test/ITKImageFusionHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/ImageFusion/test/ITKImageFusionHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/ImageFusion/test/ITKImageFusionHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/ImageFusion/include/itkLabelOverlayImageFilter.hxx:21: In file included from /<>/Modules/Filtering/ImageFusion/include/itkLabelOverlayImageFilter.h:22: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Siemens/src && /usr/bin/c++ -DITKIOSiemens_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/IPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOSiemens.dir/itkSiemensVisionImageIO.cxx.o -c /<>/Modules/IO/Siemens/src/itkSiemensVisionImageIO.cxx In file included from /<>/Modules/IO/Siemens/src/itkSiemensVisionImageIO.cxx:18: In file included from /<>/Modules/IO/Siemens/include/itkSiemensVisionImageIO.h:38: In file included from /<>/Modules/IO/IPL/include/itkIPLCommonImageIO.h:36: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE/src && /usr/bin/c++ -DITKIOGE_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/IPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/GE/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOGE.dir/itkGEAdwImageIO.cxx.o -c /<>/Modules/IO/GE/src/itkGEAdwImageIO.cxx In file included from /<>/Modules/IO/GE/src/itkGEAdwImageIO.cxx:18: In file included from /<>/Modules/IO/GE/include/itkGEAdwImageIO.h:37: In file included from /<>/Modules/IO/IPL/include/itkIPLCommonImageIO.h:36: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX executable ../../../bin/ITKImageFusionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/itkGE4ImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX shared library ../../../../lib/libITKIOSiemens-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageFusionHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageFusionHeaderTest1.dir/test/ITKImageFusionHeaderTest1.cxx.o -o ../../../bin/ITKImageFusionHeaderTest1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Siemens/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOSiemens.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOSiemens-4.12.so.1 -o ../../../../lib/libITKIOSiemens-4.12.so.1 CMakeFiles/ITKIOSiemens.dir/itkSiemensVisionImageIOFactory.cxx.o CMakeFiles/ITKIOSiemens.dir/itkSiemensVisionImageIO.cxx.o ../../../../lib/libITKIOIPL-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Siemens/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOSiemens-4.12.so.1 ../../../../lib/libITKIOSiemens-4.12.so.1 ../../../../lib/libITKIOSiemens-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKImageFusionHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Watersheds/src/CMakeFiles/ITKWatersheds.dir/build.make Modules/Segmentation/Watersheds/src/CMakeFiles/ITKWatersheds.dir/depend make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKIOSiemens make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/KLMRegionGrowing/test/CMakeFiles/ITKKLMRegionGrowingTestDriver.dir/build.make Modules/Segmentation/KLMRegionGrowing/test/CMakeFiles/ITKKLMRegionGrowingTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Watersheds/src /<>/BUILD /<>/BUILD/Modules/Segmentation/Watersheds/src /<>/BUILD/Modules/Segmentation/Watersheds/src/CMakeFiles/ITKWatersheds.dir/DependInfo.cmake --color= Scanning dependencies of target ITKWatersheds make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Watersheds/src/CMakeFiles/ITKWatersheds.dir/build.make Modules/Segmentation/Watersheds/src/CMakeFiles/ITKWatersheds.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/Watersheds/src/CMakeFiles/ITKWatersheds.dir/itkWatershedMiniPipelineProgressCommand.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/KLMRegionGrowing/test /<>/BUILD /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/test /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/test/CMakeFiles/ITKKLMRegionGrowingTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKKLMRegionGrowingTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/KLMRegionGrowing/test/CMakeFiles/ITKKLMRegionGrowingTestDriver.dir/build.make Modules/Segmentation/KLMRegionGrowing/test/CMakeFiles/ITKKLMRegionGrowingTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/KLMRegionGrowing/test/CMakeFiles/ITKKLMRegionGrowingTestDriver.dir/ITKKLMRegionGrowingTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkGiftiMeshIOFactory.cxx.o -c /<>/Modules/IO/Mesh/src/itkGiftiMeshIOFactory.cxx In file included from /<>/Modules/IO/Mesh/src/itkGiftiMeshIOFactory.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkGiftiMeshIO.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkMeshIOBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase/src && /usr/bin/c++ -DITKIOTransformBase_EXPORTS -DITK_TRANSFORM_FACTORY_MAX_DIM=4 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTransformBase.dir/itkCompositeTransformIOHelper.cxx.o -c /<>/Modules/IO/TransformBase/src/itkCompositeTransformIOHelper.cxx In file included from /<>/Modules/IO/TransformBase/src/itkCompositeTransformIOHelper.cxx:20: In file included from /<>/Modules/IO/TransformBase/include/itkCompositeTransformIOHelper.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkTransformFileReader.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds/src && /usr/bin/c++ -DITKWatersheds_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKWatersheds.dir/itkWatershedMiniPipelineProgressCommand.cxx.o -c /<>/Modules/Segmentation/Watersheds/src/itkWatershedMiniPipelineProgressCommand.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/Watersheds/src/CMakeFiles/ITKWatersheds.dir/itkOneWayEquivalencyTable.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE/src && /usr/bin/c++ -DITKIOGE_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/IPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/GE/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOGE.dir/itkGE4ImageIO.cxx.o -c /<>/Modules/IO/GE/src/itkGE4ImageIO.cxx In file included from /<>/Modules/IO/GE/src/itkGE4ImageIO.cxx:18: In file included from /<>/Modules/IO/GE/include/itkGE4ImageIO.h:46: In file included from /<>/Modules/IO/IPL/include/itkIPLCommonImageIO.h:36: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/itkGEAdwImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds/src && /usr/bin/c++ -DITKWatersheds_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKWatersheds.dir/itkOneWayEquivalencyTable.cxx.o -c /<>/Modules/Segmentation/Watersheds/src/itkOneWayEquivalencyTable.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX shared library ../../../../lib/libITKWatersheds-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKWatersheds.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKWatersheds-4.12.so.1 -o ../../../../lib/libITKWatersheds-4.12.so.1 CMakeFiles/ITKWatersheds.dir/itkWatershedMiniPipelineProgressCommand.cxx.o CMakeFiles/ITKWatersheds.dir/itkOneWayEquivalencyTable.cxx.o ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKWatersheds-4.12.so.1 ../../../../lib/libITKWatersheds-4.12.so.1 ../../../../lib/libITKWatersheds-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKWatersheds make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LabelVoting/CMakeFiles/ITKLabelVotingHeaderTest1.dir/build.make Modules/Segmentation/LabelVoting/CMakeFiles/ITKLabelVotingHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 37%] Generating test/ITKLabelVotingHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LabelVoting && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKLabelVoting /<>/Modules/Segmentation/LabelVoting /<>/BUILD/Modules/Segmentation/LabelVoting 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkMeshIOBase.cxx.o -c /<>/Modules/IO/Mesh/src/itkMeshIOBase.cxx In file included from /<>/Modules/IO/Mesh/src/itkMeshIOBase.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LabelVoting /<>/BUILD /<>/BUILD/Modules/Segmentation/LabelVoting /<>/BUILD/Modules/Segmentation/LabelVoting/CMakeFiles/ITKLabelVotingHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelVotingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LabelVoting/CMakeFiles/ITKLabelVotingHeaderTest1.dir/build.make Modules/Segmentation/LabelVoting/CMakeFiles/ITKLabelVotingHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkMeshIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/LabelVoting/CMakeFiles/ITKLabelVotingHeaderTest1.dir/test/ITKLabelVotingHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkGiftiMeshIO.cxx.o -c /<>/Modules/IO/Mesh/src/itkGiftiMeshIO.cxx In file included from /<>/Modules/IO/Mesh/src/itkGiftiMeshIO.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkGiftiMeshIO.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkOBJMeshIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkMeshIOFactory.cxx.o -c /<>/Modules/IO/Mesh/src/itkMeshIOFactory.cxx In file included from /<>/Modules/IO/Mesh/src/itkMeshIOFactory.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkBYUMeshIOFactory.h:22: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkOBJMeshIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LabelVoting && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelVotingHeaderTest1.dir/test/ITKLabelVotingHeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/LabelVoting/test/ITKLabelVotingHeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/LabelVoting/test/ITKLabelVotingHeaderTest1.cxx:23: In file included from /<>/Modules/Segmentation/LabelVoting/include/itkLabelVotingImageFilter.hxx:21: In file included from /<>/Modules/Segmentation/LabelVoting/include/itkLabelVotingImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX executable ../../../bin/ITKLabelVotingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LabelVoting && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLabelVotingHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKLabelVotingHeaderTest1.dir/test/ITKLabelVotingHeaderTest1.cxx.o -o ../../../bin/ITKLabelVotingHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKLabelVotingHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LabelVoting/test/CMakeFiles/ITKLabelVotingTestDriver.dir/build.make Modules/Segmentation/LabelVoting/test/CMakeFiles/ITKLabelVotingTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LabelVoting/test /<>/BUILD /<>/BUILD/Modules/Segmentation/LabelVoting/test /<>/BUILD/Modules/Segmentation/LabelVoting/test/CMakeFiles/ITKLabelVotingTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelVotingTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LabelVoting/test/CMakeFiles/ITKLabelVotingTestDriver.dir/build.make Modules/Segmentation/LabelVoting/test/CMakeFiles/ITKLabelVotingTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/LabelVoting/test/CMakeFiles/ITKLabelVotingTestDriver.dir/ITKLabelVotingTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkOBJMeshIOFactory.cxx.o -c /<>/Modules/IO/Mesh/src/itkOBJMeshIOFactory.cxx In file included from /<>/Modules/IO/Mesh/src/itkOBJMeshIOFactory.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkOBJMeshIO.h:23: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkOFFMeshIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkOBJMeshIO.cxx.o -c /<>/Modules/IO/Mesh/src/itkOBJMeshIO.cxx In file included from /<>/Modules/IO/Mesh/src/itkOBJMeshIO.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkOBJMeshIO.h:23: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE/src && /usr/bin/c++ -DITKIOGE_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/IPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/GE/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOGE.dir/itkGEAdwImageIOFactory.cxx.o -c /<>/Modules/IO/GE/src/itkGEAdwImageIOFactory.cxx In file included from /<>/Modules/IO/GE/src/itkGEAdwImageIOFactory.cxx:18: In file included from /<>/Modules/IO/GE/include/itkGEAdwImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/itkGE5ImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/GE/src/CMakeFiles/ITKIOGE.dir/itkGE4ImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase/src && /usr/bin/c++ -DITKIOTransformBase_EXPORTS -DITK_TRANSFORM_FACTORY_MAX_DIM=4 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTransformBase.dir/itkTransformFileReader.cxx.o -c /<>/Modules/IO/TransformBase/src/itkTransformFileReader.cxx In file included from /<>/Modules/IO/TransformBase/src/itkTransformFileReader.cxx:20: In file included from /<>/Modules/IO/TransformBase/include/itkTransformFileReader.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkTransformFileWriterSpecializations.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE/src && /usr/bin/c++ -DITKIOGE_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/IPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/GE/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOGE.dir/itkGE4ImageIOFactory.cxx.o -c /<>/Modules/IO/GE/src/itkGE4ImageIOFactory.cxx In file included from /<>/Modules/IO/GE/src/itkGE4ImageIOFactory.cxx:18: In file included from /<>/Modules/IO/GE/include/itkGE4ImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkTransformIOBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE/src && /usr/bin/c++ -DITKIOGE_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/IPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/GE/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOGE.dir/itkGE5ImageIO.cxx.o -c /<>/Modules/IO/GE/src/itkGE5ImageIO.cxx In file included from /<>/Modules/IO/GE/src/itkGE5ImageIO.cxx:18: In file included from /<>/Modules/IO/GE/include/itkGE5ImageIO.h:37: In file included from /<>/Modules/IO/IPL/include/itkIPLCommonImageIO.h:36: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX shared library ../../../../lib/libITKIOGE-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOGE.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOGE-4.12.so.1 -o ../../../../lib/libITKIOGE-4.12.so.1 CMakeFiles/ITKIOGE.dir/itkGE5ImageIOFactory.cxx.o CMakeFiles/ITKIOGE.dir/itkGEAdwImageIO.cxx.o CMakeFiles/ITKIOGE.dir/itkGE4ImageIO.cxx.o CMakeFiles/ITKIOGE.dir/itkGEAdwImageIOFactory.cxx.o CMakeFiles/ITKIOGE.dir/itkGE5ImageIO.cxx.o CMakeFiles/ITKIOGE.dir/itkGE4ImageIOFactory.cxx.o ../../../../lib/libITKIOIPL-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOGE-4.12.so.1 ../../../../lib/libITKIOGE-4.12.so.1 ../../../../lib/libITKIOGE-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKIOGE make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkOFFMeshIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkOFFMeshIO.cxx.o -c /<>/Modules/IO/Mesh/src/itkOFFMeshIO.cxx In file included from /<>/Modules/IO/Mesh/src/itkOFFMeshIO.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkOFFMeshIO.h:23: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkVTKPolyDataMeshIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase/src && /usr/bin/c++ -DITKIOTransformBase_EXPORTS -DITK_TRANSFORM_FACTORY_MAX_DIM=4 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTransformBase.dir/itkTransformIOBase.cxx.o -c /<>/Modules/IO/TransformBase/src/itkTransformIOBase.cxx In file included from /<>/Modules/IO/TransformBase/src/itkTransformIOBase.cxx:20: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/TransformBase/src/CMakeFiles/ITKIOTransformBase.dir/itkTransformIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase/src && /usr/bin/c++ -DITKIOTransformBase_EXPORTS -DITK_TRANSFORM_FACTORY_MAX_DIM=4 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTransformBase.dir/itkTransformFileWriterSpecializations.cxx.o -c /<>/Modules/IO/TransformBase/src/itkTransformFileWriterSpecializations.cxx In file included from /<>/Modules/IO/TransformBase/src/itkTransformFileWriterSpecializations.cxx:20: In file included from /<>/Modules/IO/TransformBase/include/itkTransformFileWriter.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/IO/Mesh/src/CMakeFiles/ITKIOMesh.dir/itkVTKPolyDataMeshIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkOFFMeshIOFactory.cxx.o -c /<>/Modules/IO/Mesh/src/itkOFFMeshIOFactory.cxx In file included from /<>/Modules/IO/Mesh/src/itkOFFMeshIOFactory.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkOFFMeshIO.h:23: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/MarkovRandomFieldsClassifiers/test/CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/build.make Modules/Segmentation/MarkovRandomFieldsClassifiers/test/CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/test /<>/BUILD /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers/test /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers/test/CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMarkovRandomFieldsClassifiersTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/MarkovRandomFieldsClassifiers/test/CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/build.make Modules/Segmentation/MarkovRandomFieldsClassifiers/test/CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/MarkovRandomFieldsClassifiers/test/CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/ITKMarkovRandomFieldsClassifiersTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase/src && /usr/bin/c++ -DITKIOTransformBase_EXPORTS -DITK_TRANSFORM_FACTORY_MAX_DIM=4 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTransformBase.dir/itkTransformIOFactory.cxx.o -c /<>/Modules/IO/TransformBase/src/itkTransformIOFactory.cxx In file included from /<>/Modules/IO/TransformBase/src/itkTransformIOFactory.cxx:20: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOFactory.h:24: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX shared library ../../../../lib/libITKIOTransformBase-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformBase.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOTransformBase-4.12.so.1 -o ../../../../lib/libITKIOTransformBase-4.12.so.1 CMakeFiles/ITKIOTransformBase.dir/itkCompositeTransformIOHelper.cxx.o CMakeFiles/ITKIOTransformBase.dir/itkTransformFileReader.cxx.o CMakeFiles/ITKIOTransformBase.dir/itkTransformFileWriterSpecializations.cxx.o CMakeFiles/ITKIOTransformBase.dir/itkTransformIOBase.cxx.o CMakeFiles/ITKIOTransformBase.dir/itkTransformIOFactory.cxx.o ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKIOTransformBase make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/MarkovRandomFieldsClassifiers/CMakeFiles/ITKMarkovRandomFieldsClassifiersHeaderTest1.dir/build.make Modules/Segmentation/MarkovRandomFieldsClassifiers/CMakeFiles/ITKMarkovRandomFieldsClassifiersHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 37%] Generating test/ITKMarkovRandomFieldsClassifiersHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKMarkovRandomFieldsClassifiers /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers /<>/BUILD /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers/CMakeFiles/ITKMarkovRandomFieldsClassifiersHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMarkovRandomFieldsClassifiersHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/MarkovRandomFieldsClassifiers/CMakeFiles/ITKMarkovRandomFieldsClassifiersHeaderTest1.dir/build.make Modules/Segmentation/MarkovRandomFieldsClassifiers/CMakeFiles/ITKMarkovRandomFieldsClassifiersHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/MarkovRandomFieldsClassifiers/CMakeFiles/ITKMarkovRandomFieldsClassifiersHeaderTest1.dir/test/ITKMarkovRandomFieldsClassifiersHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkVTKPolyDataMeshIOFactory.cxx.o -c /<>/Modules/IO/Mesh/src/itkVTKPolyDataMeshIOFactory.cxx In file included from /<>/Modules/IO/Mesh/src/itkVTKPolyDataMeshIOFactory.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkVTKPolyDataMeshIO.h:23: In file included from /<>/Modules/Core/Common/include/itkMetaDataObject.h:34: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/build.make Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/NeuralNetworks/test /<>/BUILD /<>/BUILD/Modules/Numerics/NeuralNetworks/test /<>/BUILD/Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNeuralNetworksTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/build.make Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/ITKNeuralNetworksTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMarkovRandomFieldsClassifiersHeaderTest1.dir/test/ITKMarkovRandomFieldsClassifiersHeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers/test/ITKMarkovRandomFieldsClassifiersHeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers/test/ITKMarkovRandomFieldsClassifiersHeaderTest1.cxx:23: In file included from /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include/itkRGBGibbsPriorFilter.hxx:21: In file included from /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include/itkRGBGibbsPriorFilter.h:24: In file included from /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include/itkMRFImageFilter.h:24: In file included from /<>/Modules/Segmentation/Classifiers/include/itkImageClassifierBase.h:21: In file included from /<>/Modules/Segmentation/Classifiers/include/itkClassifierBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipFunctionBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX executable ../../../bin/ITKMarkovRandomFieldsClassifiersHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMarkovRandomFieldsClassifiersHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKMarkovRandomFieldsClassifiersHeaderTest1.dir/test/ITKMarkovRandomFieldsClassifiersHeaderTest1.cxx.o -o ../../../bin/ITKMarkovRandomFieldsClassifiersHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKMarkovRandomFieldsClassifiersHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/RegionGrowing/test/CMakeFiles/ITKRegionGrowingTestDriver.dir/build.make Modules/Segmentation/RegionGrowing/test/CMakeFiles/ITKRegionGrowingTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/RegionGrowing/test /<>/BUILD /<>/BUILD/Modules/Segmentation/RegionGrowing/test /<>/BUILD/Modules/Segmentation/RegionGrowing/test/CMakeFiles/ITKRegionGrowingTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegionGrowingTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/RegionGrowing/test/CMakeFiles/ITKRegionGrowingTestDriver.dir/build.make Modules/Segmentation/RegionGrowing/test/CMakeFiles/ITKRegionGrowingTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/RegionGrowing/test/CMakeFiles/ITKRegionGrowingTestDriver.dir/ITKRegionGrowingTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/c++ -DITKIOMesh_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOMesh.dir/itkVTKPolyDataMeshIO.cxx.o -c /<>/Modules/IO/Mesh/src/itkVTKPolyDataMeshIO.cxx In file included from /<>/Modules/IO/Mesh/src/itkVTKPolyDataMeshIO.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkVTKPolyDataMeshIO.h:23: In file included from /<>/Modules/Core/Common/include/itkMetaDataObject.h:34: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX shared library ../../../../lib/libITKIOMesh-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOMesh.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOMesh-4.12.so.1 -o ../../../../lib/libITKIOMesh-4.12.so.1 CMakeFiles/ITKIOMesh.dir/itkMeshFileReaderException.cxx.o CMakeFiles/ITKIOMesh.dir/itkMeshFileWriterException.cxx.o CMakeFiles/ITKIOMesh.dir/itkBYUMeshIO.cxx.o CMakeFiles/ITKIOMesh.dir/itkBYUMeshIOFactory.cxx.o CMakeFiles/ITKIOMesh.dir/itkFreeSurferAsciiMeshIO.cxx.o CMakeFiles/ITKIOMesh.dir/itkFreeSurferAsciiMeshIOFactory.cxx.o CMakeFiles/ITKIOMesh.dir/itkFreeSurferBinaryMeshIO.cxx.o CMakeFiles/ITKIOMesh.dir/itkFreeSurferBinaryMeshIOFactory.cxx.o CMakeFiles/ITKIOMesh.dir/itkGiftiMeshIO.cxx.o CMakeFiles/ITKIOMesh.dir/itkGiftiMeshIOFactory.cxx.o CMakeFiles/ITKIOMesh.dir/itkMeshIOBase.cxx.o CMakeFiles/ITKIOMesh.dir/itkMeshIOFactory.cxx.o CMakeFiles/ITKIOMesh.dir/itkOBJMeshIO.cxx.o CMakeFiles/ITKIOMesh.dir/itkOBJMeshIOFactory.cxx.o CMakeFiles/ITKIOMesh.dir/itkOFFMeshIO.cxx.o CMakeFiles/ITKIOMesh.dir/itkOFFMeshIOFactory.cxx.o CMakeFiles/ITKIOMesh.dir/itkVTKPolyDataMeshIO.cxx.o CMakeFiles/ITKIOMesh.dir/itkVTKPolyDataMeshIOFactory.cxx.o -ldouble-conversion ../../../../lib/libITKgiftiio-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 -lexpat ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOMesh-4.12.so.1 ../../../../lib/libITKIOMesh-4.12.so.1 ../../../../lib/libITKIOMesh-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKIOMesh make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/RegionGrowing/CMakeFiles/ITKRegionGrowingHeaderTest1.dir/build.make Modules/Segmentation/RegionGrowing/CMakeFiles/ITKRegionGrowingHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 37%] Generating test/ITKRegionGrowingHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/RegionGrowing && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKRegionGrowing /<>/Modules/Segmentation/RegionGrowing /<>/BUILD/Modules/Segmentation/RegionGrowing 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/RegionGrowing /<>/BUILD /<>/BUILD/Modules/Segmentation/RegionGrowing /<>/BUILD/Modules/Segmentation/RegionGrowing/CMakeFiles/ITKRegionGrowingHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegionGrowingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/RegionGrowing/CMakeFiles/ITKRegionGrowingHeaderTest1.dir/build.make Modules/Segmentation/RegionGrowing/CMakeFiles/ITKRegionGrowingHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/RegionGrowing/CMakeFiles/ITKRegionGrowingHeaderTest1.dir/test/ITKRegionGrowingHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/RegionGrowing && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegionGrowingHeaderTest1.dir/test/ITKRegionGrowingHeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/RegionGrowing/test/ITKRegionGrowingHeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/RegionGrowing/test/ITKRegionGrowingHeaderTest1.cxx:23: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkIsolatedConnectedImageFilter.hxx:21: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkIsolatedConnectedImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX executable ../../../bin/ITKRegionGrowingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/RegionGrowing && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKRegionGrowingHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKRegionGrowingHeaderTest1.dir/test/ITKRegionGrowingHeaderTest1.cxx.o -o ../../../bin/ITKRegionGrowingHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKRegionGrowingHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/SpatialFunction/test/CMakeFiles/ITKSpatialFunctionTestDriver.dir/build.make Modules/Filtering/SpatialFunction/test/CMakeFiles/ITKSpatialFunctionTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/SpatialFunction/test /<>/BUILD /<>/BUILD/Modules/Filtering/SpatialFunction/test /<>/BUILD/Modules/Filtering/SpatialFunction/test/CMakeFiles/ITKSpatialFunctionTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSpatialFunctionTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/SpatialFunction/test/CMakeFiles/ITKSpatialFunctionTestDriver.dir/build.make Modules/Filtering/SpatialFunction/test/CMakeFiles/ITKSpatialFunctionTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/SpatialFunction/test/CMakeFiles/ITKSpatialFunctionTestDriver.dir/ITKSpatialFunctionTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionTestDriver.dir/ITKImageFusionTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/ImageFusion/test/ITKImageFusionTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/ImageFusion/test/ITKImageFusionTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/itkScalarToRGBPixelFunctorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageNoise/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageNoise/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageNoiseTestDriver.dir/ITKImageNoiseTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/ImageNoise/test/ITKImageNoiseTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/ImageNoise/test/ITKImageNoiseTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageNoise/test/CMakeFiles/ITKImageNoiseTestDriver.dir/itkAdditiveGaussianNoiseImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionTestDriver.dir/itkScalarToRGBPixelFunctorTest.cxx.o -c /<>/Modules/Filtering/ImageFusion/test/itkScalarToRGBPixelFunctorTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelOverlayImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKKLMRegionGrowingTestDriver.dir/ITKKLMRegionGrowingTestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/test/ITKKLMRegionGrowingTestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/test/ITKKLMRegionGrowingTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/KLMRegionGrowing/test/CMakeFiles/ITKKLMRegionGrowingTestDriver.dir/itkRegionGrow2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LabelVoting/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelVotingTestDriver.dir/ITKLabelVotingTestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/LabelVoting/test/ITKLabelVotingTestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/LabelVoting/test/ITKLabelVotingTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/LabelVoting/test/CMakeFiles/ITKLabelVotingTestDriver.dir/itkVotingBinaryImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageNoise/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageNoise/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageNoiseTestDriver.dir/itkAdditiveGaussianNoiseImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageNoise/test/itkAdditiveGaussianNoiseImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageNoise/test/itkAdditiveGaussianNoiseImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageNoise/test/CMakeFiles/ITKImageNoiseTestDriver.dir/itkShotNoiseImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelOverlayImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFusion/test/itkLabelOverlayImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFusion/test/itkLabelOverlayImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelToRGBImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/ITKMarkovRandomFieldsClassifiersTestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers/test/ITKMarkovRandomFieldsClassifiersTestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers/test/ITKMarkovRandomFieldsClassifiersTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/MarkovRandomFieldsClassifiers/test/CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/itkMRFImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksTestDriver.dir/ITKNeuralNetworksTestDriver.cxx.o -c /<>/BUILD/Modules/Numerics/NeuralNetworks/test/ITKNeuralNetworksTestDriver.cxx In file included from /<>/BUILD/Modules/Numerics/NeuralNetworks/test/ITKNeuralNetworksTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/NNetClassifierTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/RegionGrowing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegionGrowingTestDriver.dir/ITKRegionGrowingTestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/RegionGrowing/test/ITKRegionGrowingTestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/RegionGrowing/test/ITKRegionGrowingTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/RegionGrowing/test/CMakeFiles/ITKRegionGrowingTestDriver.dir/itkNeighborhoodConnectedImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageNoise/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageNoise/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageNoiseTestDriver.dir/itkShotNoiseImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageNoise/test/itkShotNoiseImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageNoise/test/itkShotNoiseImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageNoise/test/CMakeFiles/ITKImageNoiseTestDriver.dir/itkSpeckleNoiseImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelToRGBImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFusion/test/itkLabelToRGBImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFusion/test/itkLabelToRGBImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapToRGBImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksTestDriver.dir/NNetClassifierTest1.cxx.o -c /<>/Modules/Numerics/NeuralNetworks/test/NNetClassifierTest1.cxx In file included from /<>/Modules/Numerics/NeuralNetworks/test/NNetClassifierTest1.cxx:29: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/NNetClassifierTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageNoise/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageNoise/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageNoiseTestDriver.dir/itkSpeckleNoiseImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageNoise/test/itkSpeckleNoiseImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageNoise/test/itkSpeckleNoiseImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageNoise/test/CMakeFiles/ITKImageNoiseTestDriver.dir/itkSaltAndPepperNoiseImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/RegionGrowing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegionGrowingTestDriver.dir/itkNeighborhoodConnectedImageFilterTest.cxx.o -c /<>/Modules/Segmentation/RegionGrowing/test/itkNeighborhoodConnectedImageFilterTest.cxx In file included from /<>/Modules/Segmentation/RegionGrowing/test/itkNeighborhoodConnectedImageFilterTest.cxx:20: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkNeighborhoodConnectedImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/RegionGrowing/test/CMakeFiles/ITKRegionGrowingTestDriver.dir/itkIsolatedConnectedImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/itkMRFImageFilterTest.cxx.o -c /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/test/itkMRFImageFilterTest.cxx In file included from /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/test/itkMRFImageFilterTest.cxx:20: In file included from /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include/itkMRFImageFilter.h:24: In file included from /<>/Modules/Segmentation/Classifiers/include/itkImageClassifierBase.h:21: In file included from /<>/Modules/Segmentation/Classifiers/include/itkClassifierBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipFunctionBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/MarkovRandomFieldsClassifiers/test/CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/itkGibbsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksTestDriver.dir/NNetClassifierTest2.cxx.o -c /<>/Modules/Numerics/NeuralNetworks/test/NNetClassifierTest2.cxx In file included from /<>/Modules/Numerics/NeuralNetworks/test/NNetClassifierTest2.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/NNetClassifierTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapToRGBImageFilterTest1.cxx.o -c /<>/Modules/Filtering/ImageFusion/test/itkLabelMapToRGBImageFilterTest1.cxx In file included from /<>/Modules/Filtering/ImageFusion/test/itkLabelMapToRGBImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapToRGBImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKKLMRegionGrowingTestDriver.dir/itkRegionGrow2DTest.cxx.o -c /<>/Modules/Segmentation/KLMRegionGrowing/test/itkRegionGrow2DTest.cxx In file included from /<>/Modules/Segmentation/KLMRegionGrowing/test/itkRegionGrow2DTest.cxx:22: In file included from /<>/Modules/Segmentation/KLMRegionGrowing/include/itkKLMRegionGrowImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX executable ../../../../bin/ITKKLMRegionGrowingTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKKLMRegionGrowingTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKKLMRegionGrowingTestDriver.dir/ITKKLMRegionGrowingTestDriver.cxx.o CMakeFiles/ITKKLMRegionGrowingTestDriver.dir/itkRegionGrow2DTest.cxx.o -o ../../../../bin/ITKKLMRegionGrowingTestDriver ../../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKKLMRegionGrowingTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Bridge/VTK/CMakeFiles/ITKVTK-all.dir/build.make Modules/Bridge/VTK/CMakeFiles/ITKVTK-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Bridge/VTK /<>/BUILD /<>/BUILD/Modules/Bridge/VTK /<>/BUILD/Modules/Bridge/VTK/CMakeFiles/ITKVTK-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVTK-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Bridge/VTK/CMakeFiles/ITKVTK-all.dir/build.make Modules/Bridge/VTK/CMakeFiles/ITKVTK-all.dir/build make[3]: Nothing to be done for 'Modules/Bridge/VTK/CMakeFiles/ITKVTK-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKVTK-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Voronoi/test/CMakeFiles/ITKVoronoiTestDriver.dir/build.make Modules/Segmentation/Voronoi/test/CMakeFiles/ITKVoronoiTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksTestDriver.dir/NNetClassifierTest3.cxx.o -c /<>/Modules/Numerics/NeuralNetworks/test/NNetClassifierTest3.cxx In file included from /<>/Modules/Numerics/NeuralNetworks/test/NNetClassifierTest3.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/NNetClassifierTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Voronoi/test /<>/BUILD /<>/BUILD/Modules/Segmentation/Voronoi/test /<>/BUILD/Modules/Segmentation/Voronoi/test/CMakeFiles/ITKVoronoiTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVoronoiTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Voronoi/test/CMakeFiles/ITKVoronoiTestDriver.dir/build.make Modules/Segmentation/Voronoi/test/CMakeFiles/ITKVoronoiTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/Voronoi/test/CMakeFiles/ITKVoronoiTestDriver.dir/ITKVoronoiTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/RegionGrowing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegionGrowingTestDriver.dir/itkIsolatedConnectedImageFilterTest.cxx.o -c /<>/Modules/Segmentation/RegionGrowing/test/itkIsolatedConnectedImageFilterTest.cxx In file included from /<>/Modules/Segmentation/RegionGrowing/test/itkIsolatedConnectedImageFilterTest.cxx:20: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkIsolatedConnectedImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/RegionGrowing/test/CMakeFiles/ITKRegionGrowingTestDriver.dir/itkConfidenceConnectedImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageNoise/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageNoise/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageNoiseTestDriver.dir/itkSaltAndPepperNoiseImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageNoise/test/itkSaltAndPepperNoiseImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageNoise/test/itkSaltAndPepperNoiseImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageNoise/test/CMakeFiles/ITKImageNoiseTestDriver.dir/itkPeakSignalToNoiseRatioCalculatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/itkGibbsTest.cxx.o -c /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/test/itkGibbsTest.cxx In file included from /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/test/itkGibbsTest.cxx:21: In file included from /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include/itkRGBGibbsPriorFilter.h:24: In file included from /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include/itkMRFImageFilter.h:24: In file included from /<>/Modules/Segmentation/Classifiers/include/itkImageClassifierBase.h:21: In file included from /<>/Modules/Segmentation/Classifiers/include/itkClassifierBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipFunctionBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX executable ../../../../bin/ITKMarkovRandomFieldsClassifiersTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/ITKMarkovRandomFieldsClassifiersTestDriver.cxx.o CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/itkMRFImageFilterTest.cxx.o CMakeFiles/ITKMarkovRandomFieldsClassifiersTestDriver.dir/itkGibbsTest.cxx.o -o ../../../../bin/ITKMarkovRandomFieldsClassifiersTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKMarkovRandomFieldsClassifiersTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Watersheds/test/CMakeFiles/ITKWatershedsTestDriver.dir/build.make Modules/Segmentation/Watersheds/test/CMakeFiles/ITKWatershedsTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksTestDriver.dir/NNetClassifierTest4.cxx.o -c /<>/Modules/Numerics/NeuralNetworks/test/NNetClassifierTest4.cxx In file included from /<>/Modules/Numerics/NeuralNetworks/test/NNetClassifierTest4.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/RBFTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Watersheds/test /<>/BUILD /<>/BUILD/Modules/Segmentation/Watersheds/test /<>/BUILD/Modules/Segmentation/Watersheds/test/CMakeFiles/ITKWatershedsTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKWatershedsTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Watersheds/test/CMakeFiles/ITKWatershedsTestDriver.dir/build.make Modules/Segmentation/Watersheds/test/CMakeFiles/ITKWatershedsTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/Watersheds/test/CMakeFiles/ITKWatershedsTestDriver.dir/ITKWatershedsTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/SpatialFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialFunctionTestDriver.dir/ITKSpatialFunctionTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/SpatialFunction/test/ITKSpatialFunctionTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/SpatialFunction/test/ITKSpatialFunctionTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/SpatialFunction/test/CMakeFiles/ITKSpatialFunctionTestDriver.dir/itkSpatialFunctionImageEvaluatorFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapToRGBImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageFusion/test/itkLabelMapToRGBImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageFusion/test/itkLabelMapToRGBImageFilterTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapContourOverlayImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LabelVoting/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelVotingTestDriver.dir/itkVotingBinaryImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LabelVoting/test/itkVotingBinaryImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LabelVoting/test/itkVotingBinaryImageFilterTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/LabelVoting/test/CMakeFiles/ITKLabelVotingTestDriver.dir/itkLabelVotingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageNoise/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageNoise/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageNoiseTestDriver.dir/itkPeakSignalToNoiseRatioCalculatorTest.cxx.o -c /<>/Modules/Filtering/ImageNoise/test/itkPeakSignalToNoiseRatioCalculatorTest.cxx In file included from /<>/Modules/Filtering/ImageNoise/test/itkPeakSignalToNoiseRatioCalculatorTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX executable ../../../../bin/ITKImageNoiseTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageNoise/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageNoiseTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageNoiseTestDriver.dir/ITKImageNoiseTestDriver.cxx.o CMakeFiles/ITKImageNoiseTestDriver.dir/itkAdditiveGaussianNoiseImageFilterTest.cxx.o CMakeFiles/ITKImageNoiseTestDriver.dir/itkShotNoiseImageFilterTest.cxx.o CMakeFiles/ITKImageNoiseTestDriver.dir/itkSpeckleNoiseImageFilterTest.cxx.o CMakeFiles/ITKImageNoiseTestDriver.dir/itkSaltAndPepperNoiseImageFilterTest.cxx.o CMakeFiles/ITKImageNoiseTestDriver.dir/itkPeakSignalToNoiseRatioCalculatorTest.cxx.o -o ../../../../bin/ITKImageNoiseTestDriver ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 37%] Built target ITKImageNoiseTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Watersheds/CMakeFiles/ITKWatershedsHeaderTest1.dir/build.make Modules/Segmentation/Watersheds/CMakeFiles/ITKWatershedsHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 37%] Generating test/ITKWatershedsHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKWatersheds /<>/Modules/Segmentation/Watersheds /<>/BUILD/Modules/Segmentation/Watersheds 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Watersheds /<>/BUILD /<>/BUILD/Modules/Segmentation/Watersheds /<>/BUILD/Modules/Segmentation/Watersheds/CMakeFiles/ITKWatershedsHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKWatershedsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Watersheds/CMakeFiles/ITKWatershedsHeaderTest1.dir/build.make Modules/Segmentation/Watersheds/CMakeFiles/ITKWatershedsHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 37%] Building CXX object Modules/Segmentation/Watersheds/CMakeFiles/ITKWatershedsHeaderTest1.dir/test/ITKWatershedsHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/SpatialFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialFunctionTestDriver.dir/itkSpatialFunctionImageEvaluatorFilterTest.cxx.o -c /<>/Modules/Filtering/SpatialFunction/test/itkSpatialFunctionImageEvaluatorFilterTest.cxx In file included from /<>/Modules/Filtering/SpatialFunction/test/itkSpatialFunctionImageEvaluatorFilterTest.cxx:23: In file included from /<>/Modules/Core/Common/include/itkGaussianSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 37%] Linking CXX executable ../../../../bin/ITKSpatialFunctionTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKWatershedsHeaderTest1.dir/test/ITKWatershedsHeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/Watersheds/test/ITKWatershedsHeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/Watersheds/test/ITKWatershedsHeaderTest1.cxx:24: In file included from /<>/Modules/Segmentation/Watersheds/include/itkWatershedImageFilter.hxx:20: In file included from /<>/Modules/Segmentation/Watersheds/include/itkWatershedImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../bin/ITKWatershedsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/SpatialFunction/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKSpatialFunctionTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKSpatialFunctionTestDriver.dir/ITKSpatialFunctionTestDriver.cxx.o CMakeFiles/ITKSpatialFunctionTestDriver.dir/itkSpatialFunctionImageEvaluatorFilterTest.cxx.o -o ../../../../bin/ITKSpatialFunctionTestDriver ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKWatershedsHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKWatershedsHeaderTest1.dir/test/ITKWatershedsHeaderTest1.cxx.o -o ../../../bin/ITKWatershedsHeaderTest1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKWatershedsHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/build.make Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/depend make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKSpatialFunctionTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4HeaderTest2.dir/build.make Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4HeaderTest2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 38%] Generating test/ITKLevelSetsv4HeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4 && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKLevelSetsv4 /<>/Modules/Segmentation/LevelSetsv4 /<>/BUILD/Modules/Segmentation/LevelSetsv4 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LevelSetsv4 /<>/BUILD /<>/BUILD/Modules/Segmentation/LevelSetsv4 /<>/BUILD/Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4HeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLevelSetsv4HeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4HeaderTest2.dir/build.make Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4HeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4HeaderTest2.dir/test/ITKLevelSetsv4HeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LevelSetsv4/test /<>/BUILD /<>/BUILD/Modules/Segmentation/LevelSetsv4/test /<>/BUILD/Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLevelSetsv4TestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/build.make Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/RegionGrowing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegionGrowingTestDriver.dir/itkConfidenceConnectedImageFilterTest.cxx.o -c /<>/Modules/Segmentation/RegionGrowing/test/itkConfidenceConnectedImageFilterTest.cxx In file included from /<>/Modules/Segmentation/RegionGrowing/test/itkConfidenceConnectedImageFilterTest.cxx:20: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkConfidenceConnectedImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/RegionGrowing/test/CMakeFiles/ITKRegionGrowingTestDriver.dir/itkVectorConfidenceConnectedImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/ITKLevelSetsv4TestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LabelVoting/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelVotingTestDriver.dir/itkLabelVotingImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LabelVoting/test/itkLabelVotingImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LabelVoting/test/itkLabelVotingImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LabelVoting/include/itkLabelVotingImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4 && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4HeaderTest2.dir/test/ITKLevelSetsv4HeaderTest2.cxx.o -c /<>/BUILD/Modules/Segmentation/LevelSetsv4/test/ITKLevelSetsv4HeaderTest2.cxx In file included from /<>/BUILD/Modules/Segmentation/LevelSetsv4/test/ITKLevelSetsv4HeaderTest2.cxx:23: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetImage.hxx:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetBase.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LabelVoting/test/CMakeFiles/ITKLabelVotingTestDriver.dir/itkMultiLabelSTAPLEImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../bin/ITKLevelSetsv4HeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLevelSetsv4HeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKLevelSetsv4HeaderTest2.dir/test/ITKLevelSetsv4HeaderTest2.cxx.o -o ../../../bin/ITKLevelSetsv4HeaderTest2 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKLevelSetsv4HeaderTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4HeaderTest1.dir/build.make Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4HeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 38%] Generating test/ITKLevelSetsv4HeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4 && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKLevelSetsv4 /<>/Modules/Segmentation/LevelSetsv4 /<>/BUILD/Modules/Segmentation/LevelSetsv4 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LevelSetsv4 /<>/BUILD /<>/BUILD/Modules/Segmentation/LevelSetsv4 /<>/BUILD/Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4HeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLevelSetsv4HeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4HeaderTest1.dir/build.make Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4HeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4HeaderTest1.dir/test/ITKLevelSetsv4HeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4 && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4HeaderTest1.dir/test/ITKLevelSetsv4HeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/LevelSetsv4/test/ITKLevelSetsv4HeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/LevelSetsv4/test/ITKLevelSetsv4HeaderTest1.cxx:25: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkUpdateShiSparseLevelSet.hxx:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkUpdateShiSparseLevelSet.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../bin/ITKLevelSetsv4HeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLevelSetsv4HeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKLevelSetsv4HeaderTest1.dir/test/ITKLevelSetsv4HeaderTest1.cxx.o -o ../../../bin/ITKLevelSetsv4HeaderTest1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKLevelSetsv4HeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/build.make Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizersv4/test /<>/BUILD /<>/BUILD/Modules/Numerics/Optimizersv4/test /<>/BUILD/Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizersv4TestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/build.make Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/ITKOptimizersv4TestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksTestDriver.dir/RBFTest1.cxx.o -c /<>/Modules/Numerics/NeuralNetworks/test/RBFTest1.cxx In file included from /<>/Modules/Numerics/NeuralNetworks/test/RBFTest1.cxx:20: In file included from /<>/Modules/Numerics/NeuralNetworks/include/itkRBFNetwork.h:34: In file included from /<>/Modules/Numerics/NeuralNetworks/include/itkRBFLayer.h:26: In file included from /<>/Modules/Numerics/Statistics/include/itkEuclideanDistanceMetric.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkDistanceMetric.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/QPropXORTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LabelVoting/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelVotingTestDriver.dir/itkMultiLabelSTAPLEImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LabelVoting/test/itkMultiLabelSTAPLEImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LabelVoting/test/itkMultiLabelSTAPLEImageFilterTest.cxx:18: In file included from /<>/Modules/Segmentation/LabelVoting/include/itkMultiLabelSTAPLEImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LabelVoting/test/CMakeFiles/ITKLabelVotingTestDriver.dir/itkVotingBinaryIterativeHoleFillingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksTestDriver.dir/QPropXORTest1.cxx.o -c /<>/Modules/Numerics/NeuralNetworks/test/QPropXORTest1.cxx In file included from /<>/Modules/Numerics/NeuralNetworks/test/QPropXORTest1.cxx:21: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/XORTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LabelVoting/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelVotingTestDriver.dir/itkVotingBinaryIterativeHoleFillingImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LabelVoting/test/itkVotingBinaryIterativeHoleFillingImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LabelVoting/test/itkVotingBinaryIterativeHoleFillingImageFilterTest.cxx:19: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LabelVoting/test/CMakeFiles/ITKLabelVotingTestDriver.dir/itkBinaryMedianImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksTestDriver.dir/XORTest1.cxx.o -c /<>/Modules/Numerics/NeuralNetworks/test/XORTest1.cxx In file included from /<>/Modules/Numerics/NeuralNetworks/test/XORTest1.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/XORTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/RegionGrowing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegionGrowingTestDriver.dir/itkVectorConfidenceConnectedImageFilterTest.cxx.o -c /<>/Modules/Segmentation/RegionGrowing/test/itkVectorConfidenceConnectedImageFilterTest.cxx In file included from /<>/Modules/Segmentation/RegionGrowing/test/itkVectorConfidenceConnectedImageFilterTest.cxx:20: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkVectorConfidenceConnectedImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/RegionGrowing/test/CMakeFiles/ITKRegionGrowingTestDriver.dir/itkConnectedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LabelVoting/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelVotingTestDriver.dir/itkBinaryMedianImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LabelVoting/test/itkBinaryMedianImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LabelVoting/test/itkBinaryMedianImageFilterTest.cxx:19: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LabelVoting/test/CMakeFiles/ITKLabelVotingTestDriver.dir/itkVotingBinaryHoleFillingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksTestDriver.dir/XORTest2.cxx.o -c /<>/Modules/Numerics/NeuralNetworks/test/XORTest2.cxx In file included from /<>/Modules/Numerics/NeuralNetworks/test/XORTest2.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/itkLogSigmoidTransferFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksTestDriver.dir/itkLogSigmoidTransferFunctionTest.cxx.o -c /<>/Modules/Numerics/NeuralNetworks/test/itkLogSigmoidTransferFunctionTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/NeuralNetworks/test/CMakeFiles/ITKNeuralNetworksTestDriver.dir/itkSigmoidTransferFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNeuralNetworksTestDriver.dir/itkSigmoidTransferFunctionTest.cxx.o -c /<>/Modules/Numerics/NeuralNetworks/test/itkSigmoidTransferFunctionTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../../bin/ITKNeuralNetworksTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/RegionGrowing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegionGrowingTestDriver.dir/itkConnectedThresholdImageFilterTest.cxx.o -c /<>/Modules/Segmentation/RegionGrowing/test/itkConnectedThresholdImageFilterTest.cxx In file included from /<>/Modules/Segmentation/RegionGrowing/test/itkConnectedThresholdImageFilterTest.cxx:20: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkConnectedThresholdImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../../bin/ITKRegionGrowingTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NeuralNetworks/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKNeuralNetworksTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKNeuralNetworksTestDriver.dir/ITKNeuralNetworksTestDriver.cxx.o CMakeFiles/ITKNeuralNetworksTestDriver.dir/NNetClassifierTest1.cxx.o CMakeFiles/ITKNeuralNetworksTestDriver.dir/NNetClassifierTest2.cxx.o CMakeFiles/ITKNeuralNetworksTestDriver.dir/NNetClassifierTest3.cxx.o CMakeFiles/ITKNeuralNetworksTestDriver.dir/NNetClassifierTest4.cxx.o CMakeFiles/ITKNeuralNetworksTestDriver.dir/RBFTest1.cxx.o CMakeFiles/ITKNeuralNetworksTestDriver.dir/QPropXORTest1.cxx.o CMakeFiles/ITKNeuralNetworksTestDriver.dir/XORTest1.cxx.o CMakeFiles/ITKNeuralNetworksTestDriver.dir/XORTest2.cxx.o CMakeFiles/ITKNeuralNetworksTestDriver.dir/itkLogSigmoidTransferFunctionTest.cxx.o CMakeFiles/ITKNeuralNetworksTestDriver.dir/itkSigmoidTransferFunctionTest.cxx.o -o ../../../../bin/ITKNeuralNetworksTestDriver ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKNeuralNetworksTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizersv4/CMakeFiles/ITKOptimizersv4HeaderTest1.dir/build.make Modules/Numerics/Optimizersv4/CMakeFiles/ITKOptimizersv4HeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 38%] Generating test/ITKOptimizersv4HeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4 && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKOptimizersv4 /<>/Modules/Numerics/Optimizersv4 /<>/BUILD/Modules/Numerics/Optimizersv4 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizersv4 /<>/BUILD /<>/BUILD/Modules/Numerics/Optimizersv4 /<>/BUILD/Modules/Numerics/Optimizersv4/CMakeFiles/ITKOptimizersv4HeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizersv4HeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizersv4/CMakeFiles/ITKOptimizersv4HeaderTest1.dir/build.make Modules/Numerics/Optimizersv4/CMakeFiles/ITKOptimizersv4HeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/CMakeFiles/ITKOptimizersv4HeaderTest1.dir/test/ITKOptimizersv4HeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/RegionGrowing/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKRegionGrowingTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKRegionGrowingTestDriver.dir/ITKRegionGrowingTestDriver.cxx.o CMakeFiles/ITKRegionGrowingTestDriver.dir/itkNeighborhoodConnectedImageFilterTest.cxx.o CMakeFiles/ITKRegionGrowingTestDriver.dir/itkIsolatedConnectedImageFilterTest.cxx.o CMakeFiles/ITKRegionGrowingTestDriver.dir/itkConfidenceConnectedImageFilterTest.cxx.o CMakeFiles/ITKRegionGrowingTestDriver.dir/itkVectorConfidenceConnectedImageFilterTest.cxx.o CMakeFiles/ITKRegionGrowingTestDriver.dir/itkConnectedThresholdImageFilterTest.cxx.o -o ../../../../bin/ITKRegionGrowingTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKRegionGrowingTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/build.make Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LabelVoting/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelVotingTestDriver.dir/itkVotingBinaryHoleFillingImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LabelVoting/test/itkVotingBinaryHoleFillingImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LabelVoting/test/itkVotingBinaryHoleFillingImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/Thresholding/include/itkBinaryThresholdImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../../bin/ITKLabelVotingTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Metricsv4/test /<>/BUILD /<>/BUILD/Modules/Registration/Metricsv4/test /<>/BUILD/Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMetricsv4TestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/build.make Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/ITKMetricsv4TestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapContourOverlayImageFilterTest1.cxx.o -c /<>/Modules/Filtering/ImageFusion/test/itkLabelMapContourOverlayImageFilterTest1.cxx In file included from /<>/Modules/Filtering/ImageFusion/test/itkLabelMapContourOverlayImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapContourOverlayImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LabelVoting/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLabelVotingTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKLabelVotingTestDriver.dir/ITKLabelVotingTestDriver.cxx.o CMakeFiles/ITKLabelVotingTestDriver.dir/itkVotingBinaryImageFilterTest.cxx.o CMakeFiles/ITKLabelVotingTestDriver.dir/itkLabelVotingImageFilterTest.cxx.o CMakeFiles/ITKLabelVotingTestDriver.dir/itkMultiLabelSTAPLEImageFilterTest.cxx.o CMakeFiles/ITKLabelVotingTestDriver.dir/itkVotingBinaryIterativeHoleFillingImageFilterTest.cxx.o CMakeFiles/ITKLabelVotingTestDriver.dir/itkBinaryMedianImageFilterTest.cxx.o CMakeFiles/ITKLabelVotingTestDriver.dir/itkVotingBinaryHoleFillingImageFilterTest.cxx.o -o ../../../../bin/ITKLabelVotingTestDriver -ldouble-conversion ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKLabelVotingTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Metricsv4/CMakeFiles/ITKMetricsv4HeaderTest1.dir/build.make Modules/Registration/Metricsv4/CMakeFiles/ITKMetricsv4HeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 38%] Generating test/ITKMetricsv4HeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4 && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKMetricsv4 /<>/Modules/Registration/Metricsv4 /<>/BUILD/Modules/Registration/Metricsv4 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Metricsv4 /<>/BUILD /<>/BUILD/Modules/Registration/Metricsv4 /<>/BUILD/Modules/Registration/Metricsv4/CMakeFiles/ITKMetricsv4HeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMetricsv4HeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Metricsv4/CMakeFiles/ITKMetricsv4HeaderTest1.dir/build.make Modules/Registration/Metricsv4/CMakeFiles/ITKMetricsv4HeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/Metricsv4/CMakeFiles/ITKMetricsv4HeaderTest1.dir/test/ITKMetricsv4HeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4 && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4HeaderTest1.dir/test/ITKOptimizersv4HeaderTest1.cxx.o -c /<>/BUILD/Modules/Numerics/Optimizersv4/test/ITKOptimizersv4HeaderTest1.cxx In file included from /<>/BUILD/Modules/Numerics/Optimizersv4/test/ITKOptimizersv4HeaderTest1.cxx:23: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesFromShiftBase.hxx:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesFromShiftBase.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesEstimator.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../bin/ITKOptimizersv4HeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKOptimizersv4HeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKOptimizersv4HeaderTest1.dir/test/ITKOptimizersv4HeaderTest1.cxx.o -o ../../../bin/ITKOptimizersv4HeaderTest1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKOptimizersv4HeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/build.make Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/RegistrationMethodsv4/test /<>/BUILD /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationMethodsv4TestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/build.make Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/ITKRegistrationMethodsv4TestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Voronoi/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVoronoiTestDriver.dir/ITKVoronoiTestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/Voronoi/test/ITKVoronoiTestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/Voronoi/test/ITKVoronoiTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/Voronoi/test/CMakeFiles/ITKVoronoiTestDriver.dir/itkVoronoiSegmentationImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4 && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4HeaderTest1.dir/test/ITKMetricsv4HeaderTest1.cxx.o -c /<>/BUILD/Modules/Registration/Metricsv4/test/ITKMetricsv4HeaderTest1.cxx In file included from /<>/BUILD/Modules/Registration/Metricsv4/test/ITKMetricsv4HeaderTest1.cxx:23: In file included from /<>/Modules/Registration/Metricsv4/include/itkManifoldParzenWindowsPointSetFunction.hxx:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkManifoldParzenWindowsPointSetFunction.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkPointSetFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../bin/ITKMetricsv4HeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMetricsv4HeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKMetricsv4HeaderTest1.dir/test/ITKMetricsv4HeaderTest1.cxx.o -o ../../../bin/ITKMetricsv4HeaderTest1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKMetricsv4HeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/RegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4HeaderTest1.dir/build.make Modules/Registration/RegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4HeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 38%] Generating test/ITKRegistrationMethodsv4HeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4 && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKRegistrationMethodsv4 /<>/Modules/Registration/RegistrationMethodsv4 /<>/BUILD/Modules/Registration/RegistrationMethodsv4 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/RegistrationMethodsv4 /<>/BUILD /<>/BUILD/Modules/Registration/RegistrationMethodsv4 /<>/BUILD/Modules/Registration/RegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4HeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationMethodsv4HeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/RegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4HeaderTest1.dir/build.make Modules/Registration/RegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4HeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/RegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4HeaderTest1.dir/test/ITKRegistrationMethodsv4HeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKWatershedsTestDriver.dir/ITKWatershedsTestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/Watersheds/test/ITKWatershedsTestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/Watersheds/test/ITKWatershedsTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/Watersheds/test/CMakeFiles/ITKWatershedsTestDriver.dir/itkTobogganImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4 && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4HeaderTest1.dir/test/ITKRegistrationMethodsv4HeaderTest1.cxx.o -c /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test/ITKRegistrationMethodsv4HeaderTest1.cxx In file included from /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test/ITKRegistrationMethodsv4HeaderTest1.cxx:23: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkTimeVaryingBSplineVelocityFieldImageRegistrationMethod.hxx:21: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkTimeVaryingBSplineVelocityFieldImageRegistrationMethod.h:21: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../bin/ITKRegistrationMethodsv4HeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKRegistrationMethodsv4HeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKRegistrationMethodsv4HeaderTest1.dir/test/ITKRegistrationMethodsv4HeaderTest1.cxx.o -o ../../../bin/ITKRegistrationMethodsv4HeaderTest1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKRegistrationMethodsv4HeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/build.make Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Video/Core/test /<>/BUILD /<>/BUILD/Modules/Video/Core/test /<>/BUILD/Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVideoCoreTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/build.make Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/ITKVideoCoreTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/ITKLevelSetsv4TestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/LevelSetsv4/test/ITKLevelSetsv4TestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/LevelSetsv4/test/ITKLevelSetsv4TestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDenseImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Voronoi/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVoronoiTestDriver.dir/itkVoronoiSegmentationImageFilterTest.cxx.o -c /<>/Modules/Segmentation/Voronoi/test/itkVoronoiSegmentationImageFilterTest.cxx In file included from /<>/Modules/Segmentation/Voronoi/test/itkVoronoiSegmentationImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/Voronoi/include/itkVoronoiSegmentationImageFilter.h:21: In file included from /<>/Modules/Segmentation/Voronoi/include/itkVoronoiSegmentationImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/Voronoi/test/CMakeFiles/ITKVoronoiTestDriver.dir/itkVoronoiSegmentationRGBImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDenseImageTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetDenseImageTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetDenseImageTest.cxx:20: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDenseImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkDiscreteLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetBase.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkWhitakerSparseLevelSetImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/ITKOptimizersv4TestDriver.cxx.o -c /<>/BUILD/Modules/Numerics/Optimizersv4/test/ITKOptimizersv4TestDriver.cxx In file included from /<>/BUILD/Modules/Numerics/Optimizersv4/test/ITKOptimizersv4TestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkObjectToObjectOptimizerBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkObjectToObjectOptimizerBaseTest.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkObjectToObjectOptimizerBaseTest.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkObjectToObjectOptimizerBaseTest.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkGradientDescentOptimizerBasev4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKWatershedsTestDriver.dir/itkTobogganImageFilterTest.cxx.o -c /<>/Modules/Segmentation/Watersheds/test/itkTobogganImageFilterTest.cxx In file included from /<>/Modules/Segmentation/Watersheds/test/itkTobogganImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/Watersheds/include/itkTobogganImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/Watersheds/test/CMakeFiles/ITKWatershedsTestDriver.dir/itkIsolatedWatershedImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkWhitakerSparseLevelSetImageTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkWhitakerSparseLevelSetImageTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkWhitakerSparseLevelSetImageTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkWhitakerSparseLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetSparseImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkDiscreteLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetBase.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkShiSparseLevelSetImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Voronoi/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVoronoiTestDriver.dir/itkVoronoiSegmentationRGBImageFilterTest.cxx.o -c /<>/Modules/Segmentation/Voronoi/test/itkVoronoiSegmentationRGBImageFilterTest.cxx In file included from /<>/Modules/Segmentation/Voronoi/test/itkVoronoiSegmentationRGBImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/Voronoi/test/CMakeFiles/ITKVoronoiTestDriver.dir/itkVoronoiDiagram2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkShiSparseLevelSetImageTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkShiSparseLevelSetImageTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkShiSparseLevelSetImageTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkShiSparseLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetSparseImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkDiscreteLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetBase.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMalcolmSparseLevelSetImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkGradientDescentOptimizerBasev4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkGradientDescentOptimizerBasev4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkGradientDescentOptimizerBasev4Test.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkGradientDescentOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMalcolmSparseLevelSetImageTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkMalcolmSparseLevelSetImageTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkMalcolmSparseLevelSetImageTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkMalcolmSparseLevelSetImage.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkBinaryImageToWhitakerSparseLevelSetAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapContourOverlayImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageFusion/test/itkLabelMapContourOverlayImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageFusion/test/itkLabelMapContourOverlayImageFilterTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapContourOverlayImageFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Voronoi/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVoronoiTestDriver.dir/itkVoronoiDiagram2DTest.cxx.o -c /<>/Modules/Segmentation/Voronoi/test/itkVoronoiDiagram2DTest.cxx In file included from /<>/Modules/Segmentation/Voronoi/test/itkVoronoiDiagram2DTest.cxx:19: In file included from /<>/Modules/Segmentation/Voronoi/include/itkVoronoiDiagram2DGenerator.h:22: In file included from /<>/Modules/Segmentation/Voronoi/include/itkVoronoiDiagram2D.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/Voronoi/test/CMakeFiles/ITKVoronoiTestDriver.dir/itkVoronoiPartitioningImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkGradientDescentOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkGradientDescentOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkGradientDescentOptimizerv4Test.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkGradientDescentOptimizerv4Test2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/ITKMetricsv4TestDriver.cxx.o -c /<>/BUILD/Modules/Registration/Metricsv4/test/ITKMetricsv4TestDriver.cxx In file included from /<>/BUILD/Modules/Registration/Metricsv4/test/ITKMetricsv4TestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkEuclideanDistancePointSetMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKWatershedsTestDriver.dir/itkIsolatedWatershedImageFilterTest.cxx.o -c /<>/Modules/Segmentation/Watersheds/test/itkIsolatedWatershedImageFilterTest.cxx In file included from /<>/Modules/Segmentation/Watersheds/test/itkIsolatedWatershedImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/Watersheds/include/itkIsolatedWatershedImageFilter.h:21: In file included from /<>/Modules/Segmentation/Watersheds/include/itkWatershedImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/Watersheds/test/CMakeFiles/ITKWatershedsTestDriver.dir/itkWatershedImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/ITKRegistrationMethodsv4TestDriver.cxx.o -c /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test/ITKRegistrationMethodsv4TestDriver.cxx In file included from /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test/ITKRegistrationMethodsv4TestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkImageRegistrationSamplingTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkBinaryImageToWhitakerSparseLevelSetAdaptorTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkBinaryImageToWhitakerSparseLevelSetAdaptorTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkBinaryImageToWhitakerSparseLevelSetAdaptorTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkBinaryImageToMalcolmSparseLevelSetAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoCoreTestDriver.dir/ITKVideoCoreTestDriver.cxx.o -c /<>/BUILD/Modules/Video/Core/test/ITKVideoCoreTestDriver.cxx In file included from /<>/BUILD/Modules/Video/Core/test/ITKVideoCoreTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/itkRingBufferTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkGradientDescentOptimizerv4Test2.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkGradientDescentOptimizerv4Test2.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkGradientDescentOptimizerv4Test2.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkGradientDescentLineSearchOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoCoreTestDriver.dir/itkRingBufferTest.cxx.o -c /<>/Modules/Video/Core/test/itkRingBufferTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/itkTemporalRegionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoCoreTestDriver.dir/itkTemporalRegionTest.cxx.o -c /<>/Modules/Video/Core/test/itkTemporalRegionTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/itkTemporalDataObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Voronoi/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVoronoiTestDriver.dir/itkVoronoiPartitioningImageFilterTest.cxx.o -c /<>/Modules/Segmentation/Voronoi/test/itkVoronoiPartitioningImageFilterTest.cxx In file included from /<>/Modules/Segmentation/Voronoi/test/itkVoronoiPartitioningImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../../bin/ITKVoronoiTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoCoreTestDriver.dir/itkTemporalDataObjectTest.cxx.o -c /<>/Modules/Video/Core/test/itkTemporalDataObjectTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/itkTemporalProcessObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Voronoi/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVoronoiTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKVoronoiTestDriver.dir/ITKVoronoiTestDriver.cxx.o CMakeFiles/ITKVoronoiTestDriver.dir/itkVoronoiSegmentationImageFilterTest.cxx.o CMakeFiles/ITKVoronoiTestDriver.dir/itkVoronoiSegmentationRGBImageFilterTest.cxx.o CMakeFiles/ITKVoronoiTestDriver.dir/itkVoronoiDiagram2DTest.cxx.o CMakeFiles/ITKVoronoiTestDriver.dir/itkVoronoiPartitioningImageFilterTest.cxx.o -o ../../../../bin/ITKVoronoiTestDriver ../../../../lib/libITKIOMesh-4.12.so.1 ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion ../../../../lib/libITKMesh-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKVoronoiTestDriver make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/itkVideoStreamTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkEuclideanDistancePointSetMetricTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkEuclideanDistancePointSetMetricTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkEuclideanDistancePointSetMetricTest.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkEuclideanDistancePointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetric.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkExpectationBasedPointSetMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkBinaryImageToMalcolmSparseLevelSetAdaptorTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkBinaryImageToMalcolmSparseLevelSetAdaptorTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkBinaryImageToMalcolmSparseLevelSetAdaptorTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkBinaryImageToShiSparseLevelSetAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoCoreTestDriver.dir/itkTemporalProcessObjectTest.cxx.o -c /<>/Modules/Video/Core/test/itkTemporalProcessObjectTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/itkVideoSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKWatershedsTestDriver.dir/itkWatershedImageFilterTest.cxx.o -c /<>/Modules/Segmentation/Watersheds/test/itkWatershedImageFilterTest.cxx In file included from /<>/Modules/Segmentation/Watersheds/test/itkWatershedImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/Watersheds/include/itkWatershedImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/Watersheds/test/CMakeFiles/ITKWatershedsTestDriver.dir/itkMorphologicalWatershedFromMarkersImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoCoreTestDriver.dir/itkVideoStreamTest.cxx.o -c /<>/Modules/Video/Core/test/itkVideoStreamTest.cxx In file included from /<>/Modules/Video/Core/test/itkVideoStreamTest.cxx:19: In file included from /<>/Modules/Video/Core/include/itkVideoStream.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Core/test/CMakeFiles/ITKVideoCoreTestDriver.dir/itkVideoToVideoFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoCoreTestDriver.dir/itkVideoSourceTest.cxx.o -c /<>/Modules/Video/Core/test/itkVideoSourceTest.cxx In file included from /<>/Modules/Video/Core/test/itkVideoSourceTest.cxx:19: In file included from /<>/Modules/Video/Core/include/itkVideoSource.h:22: In file included from /<>/Modules/Video/Core/include/itkVideoStream.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/Watersheds/test/CMakeFiles/ITKWatershedsTestDriver.dir/itkMorphologicalWatershedImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkGradientDescentLineSearchOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkGradientDescentLineSearchOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkGradientDescentLineSearchOptimizerv4Test.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentLineSearchOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkConjugateGradientLineSearchOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapContourOverlayImageFilterTest3.cxx.o -c /<>/Modules/Filtering/ImageFusion/test/itkLabelMapContourOverlayImageFilterTest3.cxx In file included from /<>/Modules/Filtering/ImageFusion/test/itkLabelMapContourOverlayImageFilterTest3.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapOverlayImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoCoreTestDriver.dir/itkVideoToVideoFilterTest.cxx.o -c /<>/Modules/Video/Core/test/itkVideoToVideoFilterTest.cxx In file included from /<>/Modules/Video/Core/test/itkVideoToVideoFilterTest.cxx:19: In file included from /<>/Modules/Video/Core/include/itkVideoToVideoFilter.h:21: In file included from /<>/Modules/Video/Core/include/itkVideoSource.h:22: In file included from /<>/Modules/Video/Core/include/itkVideoStream.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../../bin/ITKVideoCoreTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkBinaryImageToShiSparseLevelSetAdaptorTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkBinaryImageToShiSparseLevelSetAdaptorTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkBinaryImageToShiSparseLevelSetAdaptorTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Core/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVideoCoreTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKVideoCoreTestDriver.dir/ITKVideoCoreTestDriver.cxx.o CMakeFiles/ITKVideoCoreTestDriver.dir/itkRingBufferTest.cxx.o CMakeFiles/ITKVideoCoreTestDriver.dir/itkTemporalRegionTest.cxx.o CMakeFiles/ITKVideoCoreTestDriver.dir/itkTemporalDataObjectTest.cxx.o CMakeFiles/ITKVideoCoreTestDriver.dir/itkTemporalProcessObjectTest.cxx.o CMakeFiles/ITKVideoCoreTestDriver.dir/itkVideoStreamTest.cxx.o CMakeFiles/ITKVideoCoreTestDriver.dir/itkVideoSourceTest.cxx.o CMakeFiles/ITKVideoCoreTestDriver.dir/itkVideoToVideoFilterTest.cxx.o -o ../../../../bin/ITKVideoCoreTestDriver -ldouble-conversion ../../../../lib/libITKVideoIO-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKVideoCore-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKVideoCoreTestDriver make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationChanAndVeseExternalTermTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkMultiStartOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkExpectationBasedPointSetMetricTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkExpectationBasedPointSetMetricTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkExpectationBasedPointSetMetricTest.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkExpectationBasedPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetric.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkJensenHavrdaCharvatTsallisPointSetMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKWatershedsTestDriver.dir/itkMorphologicalWatershedFromMarkersImageFilterTest.cxx.o -c /<>/Modules/Segmentation/Watersheds/test/itkMorphologicalWatershedFromMarkersImageFilterTest.cxx In file included from /<>/Modules/Segmentation/Watersheds/test/itkMorphologicalWatershedFromMarkersImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapOverlayImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkConjugateGradientLineSearchOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkConjugateGradientLineSearchOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkConjugateGradientLineSearchOptimizerv4Test.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkConjugateGradientLineSearchOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentLineSearchOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkMultiGradientOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapOverlayImageFilterTest1.cxx.o -c /<>/Modules/Filtering/ImageFusion/test/itkLabelMapOverlayImageFilterTest1.cxx In file included from /<>/Modules/Filtering/ImageFusion/test/itkLabelMapOverlayImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Filtering/ImageFusion/test/CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapOverlayImageFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkMultiStartOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkMultiStartOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkMultiStartOptimizerv4Test.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkMultiStartOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkOptimizerParameterScalesEstimatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkOptimizerParameterScalesEstimatorTest.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkOptimizerParameterScalesEstimatorTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationChanAndVeseExternalTermTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationChanAndVeseExternalTermTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationChanAndVeseExternalTermTest.cxx:21: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainer.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainerBase.h:26: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDomainMapImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesEstimatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationChanAndVeseInternalTermTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkImageRegistrationSamplingTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkImageRegistrationSamplingTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkImageRegistrationSamplingTest.cxx:19: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapOverlayImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageFusion/test/itkLabelMapOverlayImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageFusion/test/itkLabelMapOverlayImageFilterTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKWatershedsTestDriver.dir/itkMorphologicalWatershedImageFilterTest.cxx.o -c /<>/Modules/Segmentation/Watersheds/test/itkMorphologicalWatershedImageFilterTest.cxx In file included from /<>/Modules/Segmentation/Watersheds/test/itkMorphologicalWatershedImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../../bin/ITKWatershedsTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkMultiGradientOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkMultiGradientOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkMultiGradientOptimizerv4Test.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkMultiGradientOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesFromPhysicalShiftTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Watersheds/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKWatershedsTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKWatershedsTestDriver.dir/ITKWatershedsTestDriver.cxx.o CMakeFiles/ITKWatershedsTestDriver.dir/itkTobogganImageFilterTest.cxx.o CMakeFiles/ITKWatershedsTestDriver.dir/itkIsolatedWatershedImageFilterTest.cxx.o CMakeFiles/ITKWatershedsTestDriver.dir/itkWatershedImageFilterTest.cxx.o CMakeFiles/ITKWatershedsTestDriver.dir/itkMorphologicalWatershedFromMarkersImageFilterTest.cxx.o CMakeFiles/ITKWatershedsTestDriver.dir/itkMorphologicalWatershedImageFilterTest.cxx.o -o ../../../../bin/ITKWatershedsTestDriver ../../../../lib/libITKLabelMap-4.12.so.1 -ldouble-conversion ../../../../lib/libITKWatersheds-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKWatershedsTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Video/IO/test/CMakeFiles/ITKVideoIOTestDriver.dir/build.make Modules/Video/IO/test/CMakeFiles/ITKVideoIOTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Video/IO/test /<>/BUILD /<>/BUILD/Modules/Video/IO/test /<>/BUILD/Modules/Video/IO/test/CMakeFiles/ITKVideoIOTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVideoIOTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Video/IO/test/CMakeFiles/ITKVideoIOTestDriver.dir/build.make Modules/Video/IO/test/CMakeFiles/ITKVideoIOTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/IO/test/CMakeFiles/ITKVideoIOTestDriver.dir/ITKVideoIOTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/ImageFusion/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapOverlayImageFilterTest3.cxx.o -c /<>/Modules/Filtering/ImageFusion/test/itkLabelMapOverlayImageFilterTest3.cxx In file included from /<>/Modules/Filtering/ImageFusion/test/itkLabelMapOverlayImageFilterTest3.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../../bin/ITKImageFusionTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkJensenHavrdaCharvatTsallisPointSetMetricTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkJensenHavrdaCharvatTsallisPointSetMetricTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkJensenHavrdaCharvatTsallisPointSetMetricTest.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkJensenHavrdaCharvatTsallisPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetric.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkJensenHavrdaCharvatTsallisPointSetMetricRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFusion/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageFusionTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageFusionTestDriver.dir/ITKImageFusionTestDriver.cxx.o CMakeFiles/ITKImageFusionTestDriver.dir/itkScalarToRGBPixelFunctorTest.cxx.o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelOverlayImageFilterTest.cxx.o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelToRGBImageFilterTest.cxx.o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapToRGBImageFilterTest1.cxx.o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapToRGBImageFilterTest2.cxx.o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapContourOverlayImageFilterTest1.cxx.o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapContourOverlayImageFilterTest2.cxx.o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapContourOverlayImageFilterTest3.cxx.o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapOverlayImageFilterTest1.cxx.o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapOverlayImageFilterTest2.cxx.o CMakeFiles/ITKImageFusionTestDriver.dir/itkLabelMapOverlayImageFilterTest3.cxx.o -o ../../../../bin/ITKImageFusionTestDriver ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKImageFusionTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Video/IO/CMakeFiles/ITKVideoIOHeaderTest1.dir/build.make Modules/Video/IO/CMakeFiles/ITKVideoIOHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 38%] Generating test/ITKVideoIOHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKVideoIO /<>/Modules/Video/IO /<>/BUILD/Modules/Video/IO 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Video/IO /<>/BUILD /<>/BUILD/Modules/Video/IO /<>/BUILD/Modules/Video/IO/CMakeFiles/ITKVideoIOHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVideoIOHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Video/IO/CMakeFiles/ITKVideoIOHeaderTest1.dir/build.make Modules/Video/IO/CMakeFiles/ITKVideoIOHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/IO/CMakeFiles/ITKVideoIOHeaderTest1.dir/test/ITKVideoIOHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationChanAndVeseInternalTermTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationChanAndVeseInternalTermTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationChanAndVeseInternalTermTest.cxx:21: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainer.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainerBase.h:26: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDomainMapImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationCurvatureTermTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoIOHeaderTest1.dir/test/ITKVideoIOHeaderTest1.cxx.o -c /<>/BUILD/Modules/Video/IO/test/ITKVideoIOHeaderTest1.cxx In file included from /<>/BUILD/Modules/Video/IO/test/ITKVideoIOHeaderTest1.cxx:23: In file included from /<>/Modules/Video/IO/include/itkVideoIOBase.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../bin/ITKVideoIOHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVideoIOHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKVideoIOHeaderTest1.dir/test/ITKVideoIOHeaderTest1.cxx.o -o ../../../bin/ITKVideoIOHeaderTest1 ../../../lib/libITKVideoIO-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKVideoIOHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Video/Filtering/test/CMakeFiles/ITKVideoFilteringTestDriver.dir/build.make Modules/Video/Filtering/test/CMakeFiles/ITKVideoFilteringTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Video/Filtering/test /<>/BUILD /<>/BUILD/Modules/Video/Filtering/test /<>/BUILD/Modules/Video/Filtering/test/CMakeFiles/ITKVideoFilteringTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVideoFilteringTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Video/Filtering/test/CMakeFiles/ITKVideoFilteringTestDriver.dir/build.make Modules/Video/Filtering/test/CMakeFiles/ITKVideoFilteringTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Filtering/test/CMakeFiles/ITKVideoFilteringTestDriver.dir/ITKVideoFilteringTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesEstimatorTest.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkRegistrationParameterScalesEstimatorTest.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkRegistrationParameterScalesEstimatorTest.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesEstimator.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesFromPhysicalShiftPointSetTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesFromPhysicalShiftTest.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkRegistrationParameterScalesFromPhysicalShiftTest.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkRegistrationParameterScalesFromPhysicalShiftTest.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesFromPhysicalShift.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesFromShiftBase.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesEstimator.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesFromIndexShiftTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationCurvatureTermTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationCurvatureTermTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationCurvatureTermTest.cxx:20: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainer.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainerBase.h:26: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDomainMapImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationLaplacianTermTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesFromPhysicalShiftPointSetTest.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkRegistrationParameterScalesFromPhysicalShiftPointSetTest.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkRegistrationParameterScalesFromPhysicalShiftPointSetTest.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesFromPhysicalShift.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesFromShiftBase.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesEstimator.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesFromJacobianTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkJensenHavrdaCharvatTsallisPointSetMetricRegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkJensenHavrdaCharvatTsallisPointSetMetricRegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkJensenHavrdaCharvatTsallisPointSetMetricRegistrationTest.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkJensenHavrdaCharvatTsallisPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetric.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkLabeledPointSetMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationLaplacianTermTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationLaplacianTermTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationLaplacianTermTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainer.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainerBase.h:26: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDomainMapImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationPropagationTermTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesFromIndexShiftTest.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkRegistrationParameterScalesFromIndexShiftTest.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkRegistrationParameterScalesFromIndexShiftTest.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesFromIndexShift.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesFromShiftBase.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesEstimator.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkAutoScaledGradientDescentRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesFromJacobianTest.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkRegistrationParameterScalesFromJacobianTest.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkRegistrationParameterScalesFromJacobianTest.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesFromJacobian.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegistrationParameterScalesEstimator.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkAutoScaledGradientDescentRegistrationOnVectorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoIOTestDriver.dir/ITKVideoIOTestDriver.cxx.o -c /<>/BUILD/Modules/Video/IO/test/ITKVideoIOTestDriver.cxx In file included from /<>/BUILD/Modules/Video/IO/test/ITKVideoIOTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/IO/test/CMakeFiles/ITKVideoIOTestDriver.dir/itkVideoFileReaderWriterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationPropagationTermTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationPropagationTermTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationPropagationTermTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainer.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainerBase.h:26: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDomainMapImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationBinaryMaskTermTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkLabeledPointSetMetricTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkLabeledPointSetMetricTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkLabeledPointSetMetricTest.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkLabeledPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetric.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkLabeledPointSetMetricRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoIOTestDriver.dir/itkVideoFileReaderWriterTest.cxx.o -c /<>/Modules/Video/IO/test/itkVideoFileReaderWriterTest.cxx In file included from /<>/Modules/Video/IO/test/itkVideoFileReaderWriterTest.cxx:20: In file included from /<>/Modules/Video/IO/include/itkVideoFileReader.h:21: In file included from /<>/Modules/Video/Core/include/itkVideoSource.h:22: In file included from /<>/Modules/Video/Core/include/itkVideoStream.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/IO/test/CMakeFiles/ITKVideoIOTestDriver.dir/itkFileListVideoIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Filtering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoFilteringTestDriver.dir/ITKVideoFilteringTestDriver.cxx.o -c /<>/BUILD/Modules/Video/Filtering/test/ITKVideoFilteringTestDriver.cxx In file included from /<>/BUILD/Modules/Video/Filtering/test/ITKVideoFilteringTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Filtering/test/CMakeFiles/ITKVideoFilteringTestDriver.dir/itkFrameAverageVideoFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationBinaryMaskTermTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationBinaryMaskTermTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationBinaryMaskTermTest.cxx:21: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainer.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainerBase.h:26: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDomainMapImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationOverlapPenaltyTermTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoIOTestDriver.dir/itkFileListVideoIOTest.cxx.o -c /<>/Modules/Video/IO/test/itkFileListVideoIOTest.cxx In file included from /<>/Modules/Video/IO/test/itkFileListVideoIOTest.cxx:21: In file included from /<>/Modules/Video/IO/include/itkFileListVideoIO.h:21: In file included from /<>/Modules/Video/IO/include/itkVideoIOBase.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/IO/test/CMakeFiles/ITKVideoIOTestDriver.dir/itkFileListVideoIOFactoryTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoIOTestDriver.dir/itkFileListVideoIOFactoryTest.cxx.o -c /<>/Modules/Video/IO/test/itkFileListVideoIOFactoryTest.cxx In file included from /<>/Modules/Video/IO/test/itkFileListVideoIOFactoryTest.cxx:20: In file included from /<>/Modules/Video/IO/include/itkVideoIOFactory.h:21: In file included from /<>/Modules/Video/IO/include/itkVideoIOBase.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../../bin/ITKVideoIOTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/IO/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVideoIOTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKVideoIOTestDriver.dir/ITKVideoIOTestDriver.cxx.o CMakeFiles/ITKVideoIOTestDriver.dir/itkVideoFileReaderWriterTest.cxx.o CMakeFiles/ITKVideoIOTestDriver.dir/itkFileListVideoIOTest.cxx.o CMakeFiles/ITKVideoIOTestDriver.dir/itkFileListVideoIOFactoryTest.cxx.o -o ../../../../bin/ITKVideoIOTestDriver -ldouble-conversion ../../../../lib/libITKVideoIO-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKVideoCore-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKVideoIOTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionSwig.dir/build.make Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/ImageFunction/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageFunction /<>/BUILD/Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFunctionSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionSwig.dir/build.make Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Generating ../../Typedefs/itkImageFunctionBase.i, ../../Typedefs/itkBSplineDecompositionImageFilter.i, ../../Typedefs/itkBSplineInterpolateImageFunction.i, ../../Typedefs/itkBSplineResampleImageFunction.i, ../../Typedefs/itkInterpolateImageFunction.i, ../../Typedefs/itkLinearInterpolateImageFunction.i, ../../Typedefs/itkNearestNeighborInterpolateImageFunction.i, ../../Typedefs/itkRayCastInterpolateImageFunction.i, ../../Typedefs/itkImageFunctionBaseSwigInterface.h, ../../Typedefs/itkBSplineDecompositionImageFilterSwigInterface.h, ../../Typedefs/itkBSplineInterpolateImageFunctionSwigInterface.h, ../../Typedefs/itkBSplineResampleImageFunctionSwigInterface.h, ../../Typedefs/itkInterpolateImageFunctionSwigInterface.h, ../../Typedefs/itkLinearInterpolateImageFunctionSwigInterface.h, ../../Typedefs/itkNearestNeighborInterpolateImageFunctionSwigInterface.h, ../../Typedefs/itkRayCastInterpolateImageFunctionSwigInterface.h, ../../Typedefs/itkImageFunctionBase.idx, ../../Typedefs/itkBSplineDecompositionImageFilter.idx, ../../Typedefs/itkBSplineInterpolateImageFunction.idx, ../../Typedefs/itkBSplineResampleImageFunction.idx, ../../Typedefs/itkInterpolateImageFunction.idx, ../../Typedefs/itkLinearInterpolateImageFunction.idx, ../../Typedefs/itkNearestNeighborInterpolateImageFunction.idx, ../../Typedefs/itkRayCastInterpolateImageFunction.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Filtering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoFilteringTestDriver.dir/itkFrameAverageVideoFilterTest.cxx.o -c /<>/Modules/Video/Filtering/test/itkFrameAverageVideoFilterTest.cxx In file included from /<>/Modules/Video/Filtering/test/itkFrameAverageVideoFilterTest.cxx:20: In file included from /<>/Modules/Video/Filtering/include/itkFrameAverageVideoFilter.h:21: In file included from /<>/Modules/Video/Core/include/itkVideoToVideoFilter.h:21: In file included from /<>/Modules/Video/Core/include/itkVideoSource.h:22: In file included from /<>/Modules/Video/Core/include/itkVideoStream.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Filtering/test/CMakeFiles/ITKVideoFilteringTestDriver.dir/itkDecimateFramesVideoFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkAutoScaledGradientDescentRegistrationTest.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkAutoScaledGradientDescentRegistrationTest.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkAutoScaledGradientDescentRegistrationTest.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkWindowConvergenceMonitoringFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkAutoScaledGradientDescentRegistrationOnVectorTest.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkAutoScaledGradientDescentRegistrationOnVectorTest.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkAutoScaledGradientDescentRegistrationOnVectorTest.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkQuasiNewtonOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationOverlapPenaltyTermTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationOverlapPenaltyTermTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationOverlapPenaltyTermTest.cxx:21: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainer.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainerBase.h:26: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDomainMapImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationRegionTermTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationRegionTermTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationRegionTermTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationTermBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkLabeledPointSetMetricRegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkLabeledPointSetMetricRegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkLabeledPointSetMetricRegistrationTest.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkEuclideanDistancePointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetric.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkImageToImageMetricv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Filtering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoFilteringTestDriver.dir/itkDecimateFramesVideoFilterTest.cxx.o -c /<>/Modules/Video/Filtering/test/itkDecimateFramesVideoFilterTest.cxx In file included from /<>/Modules/Video/Filtering/test/itkDecimateFramesVideoFilterTest.cxx:20: In file included from /<>/Modules/Video/Filtering/include/itkDecimateFramesVideoFilter.h:21: In file included from /<>/Modules/Video/Core/include/itkVideoToVideoFilter.h:21: In file included from /<>/Modules/Video/Core/include/itkVideoSource.h:22: In file included from /<>/Modules/Video/Core/include/itkVideoStream.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Filtering/test/CMakeFiles/ITKVideoFilteringTestDriver.dir/itkImageFilterToVideoFilterWrapperTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationTermBaseTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationTermBaseTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationTermContainerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkWindowConvergenceMonitoringFunctionTest.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkWindowConvergenceMonitoringFunctionTest.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkWindowConvergenceMonitoringFunctionTest.cxx:19: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkWindowConvergenceMonitoringFunction.h:96: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkWindowConvergenceMonitoringFunction.hxx:23: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBSplineControlPointImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkObjectToObjectMetricBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkObjectToObjectMetricBaseTest.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkObjectToObjectMetricBaseTest.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkObjectToObjectMetricBaseTest.cxx:18: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkLBFGSOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkLBFGSOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkLBFGSOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkLBFGSOptimizerv4Test.cxx:19: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkLBFGSOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkLBFGSOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkSingleValuedNonLinearVnlOptimizerv4.h:23: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkLBFGSBOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkLBFGSBOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkLBFGSBOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkLBFGSBOptimizerv4Test.cxx:19: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkLBFGSBOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkLBFGSOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkSingleValuedNonLinearVnlOptimizerv4.h:23: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegularStepGradientDescentOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFunction.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKStatistics.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKTransform.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkImageFunctionBase;itkBSplineDecompositionImageFilter;itkBSplineInterpolateImageFunction;itkBSplineResampleImageFunction;itkInterpolateImageFunction;itkLinearInterpolateImageFunction;itkNearestNeighborInterpolateImageFunction;itkRayCastInterpolateImageFunction" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKImageFunctionSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTISwig.dir/build.make Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTISwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NIFTI/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIONIFTI /<>/BUILD/Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTISwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONIFTISwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTISwig.dir/build.make Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTISwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Generating ../../Typedefs/itkNiftiImageIO.i, ../../Typedefs/itkNiftiImageIOSwigInterface.h, ../../Typedefs/itkNiftiImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIONIFTI && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIONIFTI.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKTransform.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkNiftiImageIO make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKIONIFTISwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapSwig.dir/build.make Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/LabelMap/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKLabelMap /<>/BUILD/Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelMapSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapSwig.dir/build.make Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Generating ../../Typedefs/itkLabelObjectLine.i, ../../Typedefs/itkLabelObject.i, ../../Typedefs/itkShapeLabelObject.i, ../../Typedefs/itkStatisticsLabelObject.i, ../../Typedefs/ITKLabelMapBase.i, ../../Typedefs/itkLabelMapFilter.i, ../../Typedefs/itkInPlaceLabelMapFilter.i, ../../Typedefs/itkChangeRegionLabelMapFilter.i, ../../Typedefs/itkAggregateLabelMapFilter.i, ../../Typedefs/itkAutoCropLabelMapFilter.i, ../../Typedefs/itkBinaryFillholeImageFilter.i, ../../Typedefs/itkBinaryGrindPeakImageFilter.i, ../../Typedefs/itkBinaryImageToLabelMapFilter.i, ../../Typedefs/itkBinaryImageToShapeLabelMapFilter.i, ../../Typedefs/itkBinaryImageToStatisticsLabelMapFilter.i, ../../Typedefs/itkBinaryNotImageFilter.i, ../../Typedefs/itkBinaryReconstructionByDilationImageFilter.i, ../../Typedefs/itkBinaryReconstructionByErosionImageFilter.i, ../../Typedefs/itkBinaryShapeKeepNObjectsImageFilter.i, ../../Typedefs/itkBinaryShapeOpeningImageFilter.i, ../../Typedefs/itkBinaryStatisticsKeepNObjectsImageFilter.i, ../../Typedefs/itkBinaryStatisticsOpeningImageFilter.i, ../../Typedefs/itkChangeLabelLabelMapFilter.i, ../../Typedefs/itkCropLabelMapFilter.i, ../../Typedefs/itkLabelImageToLabelMapFilter.i, ../../Typedefs/itkLabelImageToShapeLabelMapFilter.i, ../../Typedefs/itkLabelImageToStatisticsLabelMapFilter.i, ../../Typedefs/itkLabelMapMaskImageFilter.i, ../../Typedefs/itkLabelMapToBinaryImageFilter.i, ../../Typedefs/itkLabelMapToLabelImageFilter.i, ../../Typedefs/itkLabelSelectionLabelMapFilter.i, ../../Typedefs/itkLabelShapeKeepNObjectsImageFilter.i, ../../Typedefs/itkLabelShapeOpeningImageFilter.i, ../../Typedefs/itkLabelStatisticsKeepNObjectsImageFilter.i, ../../Typedefs/itkLabelStatisticsOpeningImageFilter.i, ../../Typedefs/itkLabelUniqueLabelMapFilter.i, ../../Typedefs/itkMergeLabelMapFilter.i, ../../Typedefs/itkObjectByObjectLabelMapFilter.i, ../../Typedefs/itkPadLabelMapFilter.i, ../../Typedefs/itkRegionFromReferenceLabelMapFilter.i, ../../Typedefs/itkRelabelLabelMapFilter.i, ../../Typedefs/itkShapeKeepNObjectsLabelMapFilter.i, ../../Typedefs/itkShapeLabelMapFilter.i, ../../Typedefs/itkShapeOpeningLabelMapFilter.i, ../../Typedefs/itkShapePositionLabelMapFilter.i, ../../Typedefs/itkShapeRelabelImageFilter.i, ../../Typedefs/itkShapeRelabelLabelMapFilter.i, ../../Typedefs/itkShapeUniqueLabelMapFilter.i, ../../Typedefs/itkShiftScaleLabelMapFilter.i, ../../Typedefs/itkStatisticsKeepNObjectsLabelMapFilter.i, ../../Typedefs/itkStatisticsLabelMapFilter.i, ../../Typedefs/itkStatisticsOpeningLabelMapFilter.i, ../../Typedefs/itkStatisticsPositionLabelMapFilter.i, ../../Typedefs/itkStatisticsRelabelImageFilter.i, ../../Typedefs/itkStatisticsRelabelLabelMapFilter.i, ../../Typedefs/itkStatisticsUniqueLabelMapFilter.i, ../../Typedefs/itkLabelObjectLineSwigInterface.h, ../../Typedefs/itkLabelObjectSwigInterface.h, ../../Typedefs/itkShapeLabelObjectSwigInterface.h, ../../Typedefs/itkStatisticsLabelObjectSwigInterface.h, ../../Typedefs/ITKLabelMapBaseSwigInterface.h, ../../Typedefs/itkLabelMapFilterSwigInterface.h, ../../Typedefs/itkInPlaceLabelMapFilterSwigInterface.h, ../../Typedefs/itkChangeRegionLabelMapFilterSwigInterface.h, ../../Typedefs/itkAggregateLabelMapFilterSwigInterface.h, ../../Typedefs/itkAutoCropLabelMapFilterSwigInterface.h, ../../Typedefs/itkBinaryFillholeImageFilterSwigInterface.h, ../../Typedefs/itkBinaryGrindPeakImageFilterSwigInterface.h, ../../Typedefs/itkBinaryImageToLabelMapFilterSwigInterface.h, ../../Typedefs/itkBinaryImageToShapeLabelMapFilterSwigInterface.h, ../../Typedefs/itkBinaryImageToStatisticsLabelMapFilterSwigInterface.h, ../../Typedefs/itkBinaryNotImageFilterSwigInterface.h, ../../Typedefs/itkBinaryReconstructionByDilationImageFilterSwigInterface.h, ../../Typedefs/itkBinaryReconstructionByErosionImageFilterSwigInterface.h, ../../Typedefs/itkBinaryShapeKeepNObjectsImageFilterSwigInterface.h, ../../Typedefs/itkBinaryShapeOpeningImageFilterSwigInterface.h, ../../Typedefs/itkBinaryStatisticsKeepNObjectsImageFilterSwigInterface.h, ../../Typedefs/itkBinaryStatisticsOpeningImageFilterSwigInterface.h, ../../Typedefs/itkChangeLabelLabelMapFilterSwigInterface.h, ../../Typedefs/itkCropLabelMapFilterSwigInterface.h, ../../Typedefs/itkLabelImageToLabelMapFilterSwigInterface.h, ../../Typedefs/itkLabelImageToShapeLabelMapFilterSwigInterface.h, ../../Typedefs/itkLabelImageToStatisticsLabelMapFilterSwigInterface.h, ../../Typedefs/itkLabelMapMaskImageFilterSwigInterface.h, ../../Typedefs/itkLabelMapToBinaryImageFilterSwigInterface.h, ../../Typedefs/itkLabelMapToLabelImageFilterSwigInterface.h, ../../Typedefs/itkLabelSelectionLabelMapFilterSwigInterface.h, ../../Typedefs/itkLabelShapeKeepNObjectsImageFilterSwigInterface.h, ../../Typedefs/itkLabelShapeOpeningImageFilterSwigInterface.h, ../../Typedefs/itkLabelStatisticsKeepNObjectsImageFilterSwigInterface.h, ../../Typedefs/itkLabelStatisticsOpeningImageFilterSwigInterface.h, ../../Typedefs/itkLabelUniqueLabelMapFilterSwigInterface.h, ../../Typedefs/itkMergeLabelMapFilterSwigInterface.h, ../../Typedefs/itkObjectByObjectLabelMapFilterSwigInterface.h, ../../Typedefs/itkPadLabelMapFilterSwigInterface.h, ../../Typedefs/itkRegionFromReferenceLabelMapFilterSwigInterface.h, ../../Typedefs/itkRelabelLabelMapFilterSwigInterface.h, ../../Typedefs/itkShapeKeepNObjectsLabelMapFilterSwigInterface.h, ../../Typedefs/itkShapeLabelMapFilterSwigInterface.h, ../../Typedefs/itkShapeOpeningLabelMapFilterSwigInterface.h, ../../Typedefs/itkShapePositionLabelMapFilterSwigInterface.h, ../../Typedefs/itkShapeRelabelImageFilterSwigInterface.h, ../../Typedefs/itkShapeRelabelLabelMapFilterSwigInterface.h, ../../Typedefs/itkShapeUniqueLabelMapFilterSwigInterface.h, ../../Typedefs/itkShiftScaleLabelMapFilterSwigInterface.h, ../../Typedefs/itkStatisticsKeepNObjectsLabelMapFilterSwigInterface.h, ../../Typedefs/itkStatisticsLabelMapFilterSwigInterface.h, ../../Typedefs/itkStatisticsOpeningLabelMapFilterSwigInterface.h, ../../Typedefs/itkStatisticsPositionLabelMapFilterSwigInterface.h, ../../Typedefs/itkStatisticsRelabelImageFilterSwigInterface.h, ../../Typedefs/itkStatisticsRelabelLabelMapFilterSwigInterface.h, ../../Typedefs/itkStatisticsUniqueLabelMapFilterSwigInterface.h, ../../Typedefs/itkLabelObjectLine.idx, ../../Typedefs/itkLabelObject.idx, ../../Typedefs/itkShapeLabelObject.idx, ../../Typedefs/itkStatisticsLabelObject.idx, ../../Typedefs/ITKLabelMapBase.idx, ../../Typedefs/itkLabelMapFilter.idx, ../../Typedefs/itkInPlaceLabelMapFilter.idx, ../../Typedefs/itkChangeRegionLabelMapFilter.idx, ../../Typedefs/itkAggregateLabelMapFilter.idx, ../../Typedefs/itkAutoCropLabelMapFilter.idx, ../../Typedefs/itkBinaryFillholeImageFilter.idx, ../../Typedefs/itkBinaryGrindPeakImageFilter.idx, ../../Typedefs/itkBinaryImageToLabelMapFilter.idx, ../../Typedefs/itkBinaryImageToShapeLabelMapFilter.idx, ../../Typedefs/itkBinaryImageToStatisticsLabelMapFilter.idx, ../../Typedefs/itkBinaryNotImageFilter.idx, ../../Typedefs/itkBinaryReconstructionByDilationImageFilter.idx, ../../Typedefs/itkBinaryReconstructionByErosionImageFilter.idx, ../../Typedefs/itkBinaryShapeKeepNObjectsImageFilter.idx, ../../Typedefs/itkBinaryShapeOpeningImageFilter.idx, ../../Typedefs/itkBinaryStatisticsKeepNObjectsImageFilter.idx, ../../Typedefs/itkBinaryStatisticsOpeningImageFilter.idx, ../../Typedefs/itkChangeLabelLabelMapFilter.idx, ../../Typedefs/itkCropLabelMapFilter.idx, ../../Typedefs/itkLabelImageToLabelMapFilter.idx, ../../Typedefs/itkLabelImageToShapeLabelMapFilter.idx, ../../Typedefs/itkLabelImageToStatisticsLabelMapFilter.idx, ../../Typedefs/itkLabelMapMaskImageFilter.idx, ../../Typedefs/itkLabelMapToBinaryImageFilter.idx, ../../Typedefs/itkLabelMapToLabelImageFilter.idx, ../../Typedefs/itkLabelSelectionLabelMapFilter.idx, ../../Typedefs/itkLabelShapeKeepNObjectsImageFilter.idx, ../../Typedefs/itkLabelShapeOpeningImageFilter.idx, ../../Typedefs/itkLabelStatisticsKeepNObjectsImageFilter.idx, ../../Typedefs/itkLabelStatisticsOpeningImageFilter.idx, ../../Typedefs/itkLabelUniqueLabelMapFilter.idx, ../../Typedefs/itkMergeLabelMapFilter.idx, ../../Typedefs/itkObjectByObjectLabelMapFilter.idx, ../../Typedefs/itkPadLabelMapFilter.idx, ../../Typedefs/itkRegionFromReferenceLabelMapFilter.idx, ../../Typedefs/itkRelabelLabelMapFilter.idx, ../../Typedefs/itkShapeKeepNObjectsLabelMapFilter.idx, ../../Typedefs/itkShapeLabelMapFilter.idx, ../../Typedefs/itkShapeOpeningLabelMapFilter.idx, ../../Typedefs/itkShapePositionLabelMapFilter.idx, ../../Typedefs/itkShapeRelabelImageFilter.idx, ../../Typedefs/itkShapeRelabelLabelMapFilter.idx, ../../Typedefs/itkShapeUniqueLabelMapFilter.idx, ../../Typedefs/itkShiftScaleLabelMapFilter.idx, ../../Typedefs/itkStatisticsKeepNObjectsLabelMapFilter.idx, ../../Typedefs/itkStatisticsLabelMapFilter.idx, ../../Typedefs/itkStatisticsOpeningLabelMapFilter.idx, ../../Typedefs/itkStatisticsPositionLabelMapFilter.idx, ../../Typedefs/itkStatisticsRelabelImageFilter.idx, ../../Typedefs/itkStatisticsRelabelLabelMapFilter.idx, ../../Typedefs/itkStatisticsUniqueLabelMapFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTest2.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest2.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest2.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest2.cxx:27: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest2.cxx:184:12: note: in instantiation of template class 'itk::Euler3DTransform' requested here typename RigidTransformType::Pointer rigidTransform = RigidTransformType::New(); ^ /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest2.cxx:357:13: note: in instantiation of function template specialization 'PerformSimpleImageRegistration2<3>' requested here return PerformSimpleImageRegistration2<3>( argc, argv ); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Filtering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoFilteringTestDriver.dir/itkImageFilterToVideoFilterWrapperTest.cxx.o -c /<>/Modules/Video/Filtering/test/itkImageFilterToVideoFilterWrapperTest.cxx In file included from /<>/Modules/Video/Filtering/test/itkImageFilterToVideoFilterWrapperTest.cxx:20: In file included from /<>/Modules/Video/Filtering/include/itkImageFilterToVideoFilterWrapper.h:21: In file included from /<>/Modules/Video/Core/include/itkVideoToVideoFilter.h:21: In file included from /<>/Modules/Video/Core/include/itkVideoSource.h:22: In file included from /<>/Modules/Video/Core/include/itkVideoStream.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Video/Filtering/test/CMakeFiles/ITKVideoFilteringTestDriver.dir/itkFrameDifferenceVideoFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationTermContainerTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationTermContainerTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEquationTermContainerTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainer.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainerBase.h:26: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDomainMapImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDomainPartitionBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkImageToImageMetricv4Test.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkImageToImageMetricv4Test.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkImageToImageMetricv4Test.cxx:18: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkJointHistogramMutualInformationImageToImageMetricv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDomainPartitionBaseTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetDomainPartitionBaseTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetDomainPartitionBaseTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDomainPartitionImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegularStepGradientDescentOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkRegularStepGradientDescentOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkRegularStepGradientDescentOptimizerv4Test.cxx:19: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkRegularStepGradientDescentOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkAmoebaOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkQuasiNewtonOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkQuasiNewtonOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkQuasiNewtonOptimizerv4Test.cxx:18: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkQuasiNewtonOptimizerv4.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkGradientDescentOptimizerBasev4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkExhaustiveOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Filtering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKVideoFilteringTestDriver.dir/itkFrameDifferenceVideoFilterTest.cxx.o -c /<>/Modules/Video/Filtering/test/itkFrameDifferenceVideoFilterTest.cxx In file included from /<>/Modules/Video/Filtering/test/itkFrameDifferenceVideoFilterTest.cxx:20: In file included from /<>/Modules/Video/Filtering/include/itkFrameDifferenceVideoFilter.h:21: In file included from /<>/Modules/Video/Core/include/itkVideoToVideoFilter.h:21: In file included from /<>/Modules/Video/Core/include/itkVideoSource.h:22: In file included from /<>/Modules/Video/Core/include/itkVideoStream.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDomainPartitionImageTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetDomainPartitionImageTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetDomainPartitionImageTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkBinaryImageToLevelSetImageAdaptor.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkBinaryImageToLevelSetImageAdaptorBase.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Linking CXX executable ../../../../bin/ITKVideoFilteringTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDomainPartitionImageWithKdTreeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Video/Filtering/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVideoFilteringTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKVideoFilteringTestDriver.dir/ITKVideoFilteringTestDriver.cxx.o CMakeFiles/ITKVideoFilteringTestDriver.dir/itkFrameAverageVideoFilterTest.cxx.o CMakeFiles/ITKVideoFilteringTestDriver.dir/itkDecimateFramesVideoFilterTest.cxx.o CMakeFiles/ITKVideoFilteringTestDriver.dir/itkImageFilterToVideoFilterWrapperTest.cxx.o CMakeFiles/ITKVideoFilteringTestDriver.dir/itkFrameDifferenceVideoFilterTest.cxx.o -o ../../../../bin/ITKVideoFilteringTestDriver ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion ../../../../lib/libITKVideoIO-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKVideoCore-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 38%] Built target ITKVideoFilteringTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshSwig.dir/build.make Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Mesh/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKMesh /<>/BUILD/Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMeshSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshSwig.dir/build.make Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 38%] Generating ../../Typedefs/itkMeshBase.i, ../../Typedefs/itkMeshSource.i, ../../Typedefs/itkImageToMeshFilter.i, ../../Typedefs/itkMeshToMeshFilter.i, ../../Typedefs/itkBinaryMask3DMeshSource.i, ../../Typedefs/itkMeshBaseSwigInterface.h, ../../Typedefs/itkMeshSourceSwigInterface.h, ../../Typedefs/itkImageToMeshFilterSwigInterface.h, ../../Typedefs/itkMeshToMeshFilterSwigInterface.h, ../../Typedefs/itkBinaryMask3DMeshSourceSwigInterface.h, ../../Typedefs/itkMeshBase.idx, ../../Typedefs/itkMeshSource.idx, ../../Typedefs/itkImageToMeshFilter.idx, ../../Typedefs/itkMeshToMeshFilter.idx, ../../Typedefs/itkBinaryMask3DMeshSource.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkAmoebaOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkAmoebaOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkAmoebaOptimizerv4Test.cxx:19: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkAmoebaOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkSingleValuedNonLinearVnlOptimizerv4.h:23: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 38%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkPowellOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkExhaustiveOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkExhaustiveOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkExhaustiveOptimizerv4Test.cxx:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkExhaustiveOptimizerv4.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Numerics/Optimizersv4/test/CMakeFiles/ITKOptimizersv4TestDriver.dir/itkOnePlusOneEvolutionaryOptimizerv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkPowellOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkPowellOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkPowellOptimizerv4Test.cxx:19: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkPowellOptimizerv4.h:22: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKPath/CMakeFiles/ITKPathSwig.dir/build.make Wrapping/Modules/ITKPath/CMakeFiles/ITKPathSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Path/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKPath /<>/BUILD/Wrapping/Modules/ITKPath/CMakeFiles/ITKPathSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPathSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKPath/CMakeFiles/ITKPathSwig.dir/build.make Wrapping/Modules/ITKPath/CMakeFiles/ITKPathSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 39%] Generating ../../Typedefs/itkPathBase.i, ../../Typedefs/itkPolyLineParametricPath.i, ../../Typedefs/itkPathToImageFilter.i, ../../Typedefs/itkParametricPath.i, ../../Typedefs/itkImageToPathFilter.i, ../../Typedefs/itkPathSource.i, ../../Typedefs/itkPathBaseSwigInterface.h, ../../Typedefs/itkPolyLineParametricPathSwigInterface.h, ../../Typedefs/itkPathToImageFilterSwigInterface.h, ../../Typedefs/itkParametricPathSwigInterface.h, ../../Typedefs/itkImageToPathFilterSwigInterface.h, ../../Typedefs/itkPathSourceSwigInterface.h, ../../Typedefs/itkPathBase.idx, ../../Typedefs/itkPolyLineParametricPath.idx, ../../Typedefs/itkPathToImageFilter.idx, ../../Typedefs/itkParametricPath.idx, ../../Typedefs/itkImageToPathFilter.idx, ../../Typedefs/itkPathSource.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkOnePlusOneEvolutionaryOptimizerv4Test.cxx.o -c /<>/Modules/Numerics/Optimizersv4/test/itkOnePlusOneEvolutionaryOptimizerv4Test.cxx In file included from /<>/Modules/Numerics/Optimizersv4/test/itkOnePlusOneEvolutionaryOptimizerv4Test.cxx:19: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkOnePlusOneEvolutionaryOptimizerv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectOptimizerBase.h:25: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Linking CXX executable ../../../../bin/ITKOptimizersv4TestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDomainPartitionImageWithKdTreeTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetDomainPartitionImageWithKdTreeTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetDomainPartitionImageWithKdTreeTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkBinaryImageToLevelSetImageAdaptor.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkBinaryImageToLevelSetImageAdaptorBase.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDomainMapImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizersv4/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKOptimizersv4TestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKOptimizersv4TestDriver.dir/ITKOptimizersv4TestDriver.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkObjectToObjectOptimizerBaseTest.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkGradientDescentOptimizerBasev4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkGradientDescentOptimizerv4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkGradientDescentOptimizerv4Test2.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkGradientDescentLineSearchOptimizerv4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkConjugateGradientLineSearchOptimizerv4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkMultiStartOptimizerv4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkMultiGradientOptimizerv4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkOptimizerParameterScalesEstimatorTest.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesEstimatorTest.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesFromPhysicalShiftTest.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesFromPhysicalShiftPointSetTest.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesFromIndexShiftTest.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegistrationParameterScalesFromJacobianTest.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkAutoScaledGradientDescentRegistrationTest.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkAutoScaledGradientDescentRegistrationOnVectorTest.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkWindowConvergenceMonitoringFunctionTest.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkQuasiNewtonOptimizerv4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkObjectToObjectMetricBaseTest.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkLBFGSOptimizerv4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkLBFGSBOptimizerv4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkRegularStepGradientDescentOptimizerv4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkAmoebaOptimizerv4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkExhaustiveOptimizerv4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkPowellOptimizerv4Test.cxx.o CMakeFiles/ITKOptimizersv4TestDriver.dir/itkOnePlusOneEvolutionaryOptimizerv4Test.cxx.o -o ../../../../bin/ITKOptimizersv4TestDriver ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizersv4-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 39%] Built target ITKOptimizersv4TestDriver make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingSwig.dir/build.make Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Smoothing/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKSmoothing /<>/BUILD/Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSmoothingSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingSwig.dir/build.make Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 39%] Generating ../../Typedefs/itkBinomialBlurImageFilter.i, ../../Typedefs/itkDiscreteGaussianImageFilter.i, ../../Typedefs/itkMeanImageFilter.i, ../../Typedefs/itkMedianImageFilter.i, ../../Typedefs/itkRecursiveGaussianImageFilter.i, ../../Typedefs/itkSmoothingRecursiveGaussianImageFilter.i, ../../Typedefs/itkBinomialBlurImageFilterSwigInterface.h, ../../Typedefs/itkDiscreteGaussianImageFilterSwigInterface.h, ../../Typedefs/itkMeanImageFilterSwigInterface.h, ../../Typedefs/itkMedianImageFilterSwigInterface.h, ../../Typedefs/itkRecursiveGaussianImageFilterSwigInterface.h, ../../Typedefs/itkSmoothingRecursiveGaussianImageFilterSwigInterface.h, ../../Typedefs/itkBinomialBlurImageFilter.idx, ../../Typedefs/itkDiscreteGaussianImageFilter.idx, ../../Typedefs/itkMeanImageFilter.idx, ../../Typedefs/itkMedianImageFilter.idx, ../../Typedefs/itkRecursiveGaussianImageFilter.idx, ../../Typedefs/itkSmoothingRecursiveGaussianImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKPath.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFunction.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkPathBase;itkPolyLineParametricPath;itkPathToImageFilter;itkParametricPath;itkImageToPathFilter;itkPathSource" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 39%] Built target ITKPathSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMSwig.dir/build.make Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/LSM/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOLSM /<>/BUILD/Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOLSMSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMSwig.dir/build.make Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 39%] Generating ../../Typedefs/itkLSMImageIO.i, ../../Typedefs/itkLSMImageIOSwigInterface.h, ../../Typedefs/itkLSMImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDomainMapImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetDomainMapImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetDomainMapImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDomainMapImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkDenseLevelSetContainerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOLSM && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOLSM.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOTIFF.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkLSMImageIO make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 39%] Built target ITKIOLSMSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/build.make Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/test /<>/BUILD /<>/BUILD/Modules/Core/Common/test /<>/BUILD/Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommon2TestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/build.make Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/ITKCommon2TestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkDenseLevelSetContainerTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkDenseLevelSetContainerTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkDenseLevelSetContainerTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainer.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainerBase.h:26: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDomainMapImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSparseLevelSetContainerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKSmoothing.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFunction.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkBinomialBlurImageFilter;itkDiscreteGaussianImageFilter;itkMeanImageFilter;itkMedianImageFilter;itkRecursiveGaussianImageFilter;itkSmoothingRecursiveGaussianImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 39%] Built target ITKSmoothingSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/build.make Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSparseLevelSetContainerTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkSparseLevelSetContainerTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkSparseLevelSetContainerTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkWhitakerSparseLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetSparseImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkDiscreteLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetBase.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetDenseImage2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/test /<>/BUILD /<>/BUILD/Modules/Core/Common/test /<>/BUILD/Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommon1TestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/build.make Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/ITKCommon1TestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkJointHistogramMutualInformationImageToImageMetricv4Test.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkJointHistogramMutualInformationImageToImageMetricv4Test.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkJointHistogramMutualInformationImageToImageMetricv4Test.cxx:20: In file included from /<>/Modules/Registration/Metricsv4/include/itkJointHistogramMutualInformationImageToImageMetricv4.h:22: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkJointHistogramMutualInformationImageToImageRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKMesh.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKTransform.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkMeshBase;itkMeshSource;itkImageToMeshFilter;itkMeshToMeshFilter;itkBinaryMask3DMeshSource" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 39%] Built target ITKMeshSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFilterBase/test/CMakeFiles/ITKImageFilterBaseTestDriver.dir/build.make Modules/Filtering/ImageFilterBase/test/CMakeFiles/ITKImageFilterBaseTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFilterBase/test /<>/BUILD /<>/BUILD/Modules/Filtering/ImageFilterBase/test /<>/BUILD/Modules/Filtering/ImageFilterBase/test/CMakeFiles/ITKImageFilterBaseTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFilterBaseTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFilterBase/test/CMakeFiles/ITKImageFilterBaseTestDriver.dir/build.make Modules/Filtering/ImageFilterBase/test/CMakeFiles/ITKImageFilterBaseTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Filtering/ImageFilterBase/test/CMakeFiles/ITKImageFilterBaseTestDriver.dir/ITKImageFilterBaseTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetDenseImage2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetDenseImage2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetDenseImage2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetDenseAdvectionImage2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/ITKCommon2TestDriver.cxx.o -c /<>/BUILD/Modules/Core/Common/test/ITKCommon2TestDriver.cxx In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommon2TestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkMetaProgrammingLibraryTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkMetaProgrammingLibraryTest.cxx.o -c /<>/Modules/Core/Common/test/itkMetaProgrammingLibraryTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkIsConvertible.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkIsConvertible.cxx.o -c /<>/Modules/Core/Common/test/itkIsConvertible.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkIsBaseOf.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkIsBaseOf.cxx.o -c /<>/Modules/Core/Common/test/itkIsBaseOf.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkPromoteType.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkPromoteType.cxx.o -c /<>/Modules/Core/Common/test/itkPromoteType.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedIndexedContainerPartitionerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedIndexedContainerPartitionerTest.cxx.o -c /<>/Modules/Core/Common/test/itkThreadedIndexedContainerPartitionerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedIteratorRangePartitionerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedIteratorRangePartitionerTest.cxx.o -c /<>/Modules/Core/Common/test/itkThreadedIteratorRangePartitionerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedIteratorRangePartitionerTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkJointHistogramMutualInformationImageToImageRegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkJointHistogramMutualInformationImageToImageRegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkJointHistogramMutualInformationImageToImageRegistrationTest.cxx:27: In file included from /<>/Modules/Registration/Metricsv4/include/itkJointHistogramMutualInformationImageToImageMetricv4.h:22: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedIteratorRangePartitionerTest2.cxx.o -c /<>/Modules/Core/Common/test/itkThreadedIteratorRangePartitionerTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedIteratorRangePartitionerTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFilterBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFilterBaseTestDriver.dir/ITKImageFilterBaseTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/ImageFilterBase/test/ITKImageFilterBaseTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/ImageFilterBase/test/ITKImageFilterBaseTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Filtering/ImageFilterBase/test/CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkNeighborhoodOperatorImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetDenseAdvectionImage2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetDenseAdvectionImage2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetDenseAdvectionImage2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetWhitakerImage2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedIteratorRangePartitionerTest3.cxx.o -c /<>/Modules/Core/Common/test/itkThreadedIteratorRangePartitionerTest3.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedImageRegionPartitionerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedImageRegionPartitionerTest.cxx.o -c /<>/Modules/Core/Common/test/itkThreadedImageRegionPartitionerTest.cxx In file included from /<>/Modules/Core/Common/test/itkThreadedImageRegionPartitionerTest.cxx:18: In file included from /<>/Modules/Core/Common/include/itkThreadedImageRegionPartitioner.h:22: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkMetaDataDictionaryTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFilterBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkNeighborhoodOperatorImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFilterBase/test/itkNeighborhoodOperatorImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFilterBase/test/itkNeighborhoodOperatorImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkNeighborhoodOperatorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Filtering/ImageFilterBase/test/CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkImageToImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkMetaDataDictionaryTest.cxx.o -c /<>/Modules/Core/Common/test/itkMetaDataDictionaryTest.cxx In file included from /<>/Modules/Core/Common/test/itkMetaDataDictionaryTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkMetaDataObject.h:34: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkStdStreamLogOutputTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkStdStreamLogOutputTest.cxx.o -c /<>/Modules/Core/Common/test/itkStdStreamLogOutputTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkOctreeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFilterBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkImageToImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFilterBase/test/itkImageToImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFilterBase/test/itkImageToImageFilterTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Filtering/ImageFilterBase/test/CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkVectorNeighborhoodOperatorImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkOctreeTest.cxx.o -c /<>/Modules/Core/Common/test/itkOctreeTest.cxx In file included from /<>/Modules/Core/Common/test/itkOctreeTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkOctree.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkLoggerThreadWrapperTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkLoggerThreadWrapperTest.cxx.o -c /<>/Modules/Core/Common/test/itkLoggerThreadWrapperTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkThreadLoggerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTest3.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest3.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest3.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest3.cxx:30: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:127:20: note: in instantiation of template class 'itk::Euler3DTransform' requested here typedef typename OutputTransformType::Pointer OutputTransformPointer; ^ /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest3.cxx:180:12: note: in instantiation of template class 'itk::ImageRegistrationMethodv4, itk::Image, itk::Euler3DTransform, itk::Image, itk::PointSet > >' requested here typename RigidRegistrationType::Pointer rigidRegistration = RigidRegistrationType::New(); ^ /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest3.cxx:342:14: note: in instantiation of function template specialization 'PerformCompositeImageRegistration<3>' requested here return PerformCompositeImageRegistration<3>( argc, argv ); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTestWithMaskAndSampling.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadLoggerTest.cxx.o -c /<>/Modules/Core/Common/test/itkThreadLoggerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkThreadDefsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFilterBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkVectorNeighborhoodOperatorImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFilterBase/test/itkVectorNeighborhoodOperatorImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFilterBase/test/itkVectorNeighborhoodOperatorImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkVectorNeighborhoodOperatorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Filtering/ImageFilterBase/test/CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkMaskNeighborhoodOperatorImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadDefsTest.cxx.o -c /<>/Modules/Core/Common/test/itkThreadDefsTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkTimeProbesTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4Test.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4Test.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4Test.cxx:18: In file included from /<>/Modules/Registration/Metricsv4/include/itkMeanSquaresImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkCorrelationImageToImageMetricv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkTimeProbesTest.cxx.o -c /<>/Modules/Core/Common/test/itkTimeProbesTest.cxx In file included from /<>/Modules/Core/Common/test/itkTimeProbesTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkTreeContainerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetWhitakerImage2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetWhitakerImage2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetWhitakerImage2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 39%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetMalcolmImage2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkTreeContainerTest.cxx.o -c /<>/Modules/Core/Common/test/itkTreeContainerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkVariableLengthVectorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFilterBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkMaskNeighborhoodOperatorImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFilterBase/test/itkMaskNeighborhoodOperatorImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFilterBase/test/itkMaskNeighborhoodOperatorImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkMaskNeighborhoodOperatorImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkNeighborhoodOperatorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Filtering/ImageFilterBase/test/CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkCastImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTest4.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest4.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTest4.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimplePointSetRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkVariableLengthVectorTest.cxx.o -c /<>/Modules/Core/Common/test/itkVariableLengthVectorTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkSpatialFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkSpatialFunctionTest.cxx.o -c /<>/Modules/Core/Common/test/itkSpatialFunctionTest.cxx In file included from /<>/Modules/Core/Common/test/itkSpatialFunctionTest.cxx:22: In file included from /<>/Modules/Core/Common/include/itkSphereSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkPeriodicBoundaryConditionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkCorrelationImageToImageMetricv4Test.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkCorrelationImageToImageMetricv4Test.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkCorrelationImageToImageMetricv4Test.cxx:18: In file included from /<>/Modules/Registration/Metricsv4/include/itkCorrelationImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4OnVectorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkPeriodicBoundaryConditionTest.cxx.o -c /<>/Modules/Core/Common/test/itkPeriodicBoundaryConditionTest.cxx In file included from /<>/Modules/Core/Common/test/itkPeriodicBoundaryConditionTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkPeriodicBoundaryCondition.h:20: In file included from /<>/Modules/Core/Common/include/itkImageBoundaryCondition.h:23: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkSmartPointerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkSmartPointerTest.cxx.o -c /<>/Modules/Core/Common/test/itkSmartPointerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkBarrierTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkBarrierTest.cxx.o -c /<>/Modules/Core/Common/test/itkBarrierTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkVariableSizeMatrixTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkVariableSizeMatrixTest.cxx.o -c /<>/Modules/Core/Common/test/itkVariableSizeMatrixTest.cxx In file included from /<>/Modules/Core/Common/test/itkVariableSizeMatrixTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkVariableSizeMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkConicShellInteriorExteriorSpatialFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkConicShellInteriorExteriorSpatialFunctionTest.cxx.o -c /<>/Modules/Core/Common/test/itkConicShellInteriorExteriorSpatialFunctionTest.cxx In file included from /<>/Modules/Core/Common/test/itkConicShellInteriorExteriorSpatialFunctionTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkConicShellInteriorExteriorSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkEllipsoidInteriorExteriorSpatialFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkEllipsoidInteriorExteriorSpatialFunctionTest.cxx.o -c /<>/Modules/Core/Common/test/itkEllipsoidInteriorExteriorSpatialFunctionTest.cxx In file included from /<>/Modules/Core/Common/test/itkEllipsoidInteriorExteriorSpatialFunctionTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkEllipsoidInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkFrustumSpatialFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetMalcolmImage2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetMalcolmImage2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetMalcolmImage2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetShiImage2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkFrustumSpatialFunctionTest.cxx.o -c /<>/Modules/Core/Common/test/itkFrustumSpatialFunctionTest.cxx In file included from /<>/Modules/Core/Common/test/itkFrustumSpatialFunctionTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkFrustumSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkTorusInteriorExteriorSpatialFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkTorusInteriorExteriorSpatialFunctionTest.cxx.o -c /<>/Modules/Core/Common/test/itkTorusInteriorExteriorSpatialFunctionTest.cxx In file included from /<>/Modules/Core/Common/test/itkTorusInteriorExteriorSpatialFunctionTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkTorusInteriorExteriorSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkTimeStampTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkTimeStampTest.cxx.o -c /<>/Modules/Core/Common/test/itkTimeStampTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkConstNeighborhoodIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4OnVectorTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4OnVectorTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4OnVectorTest.cxx:18: In file included from /<>/Modules/Registration/Metricsv4/include/itkMeanSquaresImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4OnVectorTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkConstNeighborhoodIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkConstNeighborhoodIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkConstNeighborhoodIteratorTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodIteratorTestCommon.hxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkShapedNeighborhoodIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkShapedNeighborhoodIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkShapedNeighborhoodIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkShapedNeighborhoodIteratorTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodIteratorTestCommon.hxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkSizeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkSizeTest.cxx.o -c /<>/Modules/Core/Common/test/itkSizeTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkMatrixTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkMatrixTest.cxx.o -c /<>/Modules/Core/Common/test/itkMatrixTest.cxx In file included from /<>/Modules/Core/Common/test/itkMatrixTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkAutoPointerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkAutoPointerTest.cxx.o -c /<>/Modules/Core/Common/test/itkAutoPointerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkNeighborhoodIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetShiImage2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetShiImage2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetShiImage2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetWhitakerImage2DWithCurvatureTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkNeighborhoodIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkNeighborhoodIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkNeighborhoodIteratorTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodIteratorTestCommon.hxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkLoggerManagerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkLoggerManagerTest.cxx.o -c /<>/Modules/Core/Common/test/itkLoggerManagerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o -c /<>/Modules/Core/Common/test/itkBSplineInterpolationWeightFunctionTest.cxx In file included from /<>/Modules/Core/Common/test/itkBSplineInterpolationWeightFunctionTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkBSplineInterpolationWeightFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkSymmetricSecondRankTensorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimplePointSetRegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimplePointSetRegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimplePointSetRegistrationTest.cxx:19: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkExponentialImageRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkSymmetricSecondRankTensorTest.cxx.o -c /<>/Modules/Core/Common/test/itkSymmetricSecondRankTensorTest.cxx In file included from /<>/Modules/Core/Common/test/itkSymmetricSecondRankTensorTest.cxx:22: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkConstShapedNeighborhoodIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4OnVectorTest2.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4OnVectorTest2.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4OnVectorTest2.cxx:18: In file included from /<>/Modules/Registration/Metricsv4/include/itkMeanSquaresImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkANTSNeighborhoodCorrelationImageToImageMetricv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkConstShapedNeighborhoodIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkConstShapedNeighborhoodIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkConstShapedNeighborhoodIteratorTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodIteratorTestCommon.hxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkConstShapedNeighborhoodIteratorTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetWhitakerImage2DWithCurvatureTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetWhitakerImage2DWithCurvatureTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetWhitakerImage2DWithCurvatureTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetWhitakerImage2DWithLaplacianTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkConstShapedNeighborhoodIteratorTest2.cxx.o -c /<>/Modules/Core/Common/test/itkConstShapedNeighborhoodIteratorTest2.cxx In file included from /<>/Modules/Core/Common/test/itkConstShapedNeighborhoodIteratorTest2.cxx:19: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodIteratorTestCommon.hxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkSTLContainerAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkSTLContainerAdaptorTest.cxx.o -c /<>/Modules/Core/Common/test/itkSTLContainerAdaptorTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkFiniteCylinderSpatialFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkFiniteCylinderSpatialFunctionTest.cxx.o -c /<>/Modules/Core/Common/test/itkFiniteCylinderSpatialFunctionTest.cxx In file included from /<>/Modules/Core/Common/test/itkFiniteCylinderSpatialFunctionTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkFiniteCylinderSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkLoggerOutputTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkLoggerOutputTest.cxx.o -c /<>/Modules/Core/Common/test/itkLoggerOutputTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkNeighborhoodTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkNeighborhoodTest.cxx.o -c /<>/Modules/Core/Common/test/itkNeighborhoodTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkVersorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkVersorTest.cxx.o -c /<>/Modules/Core/Common/test/itkVersorTest.cxx In file included from /<>/Modules/Core/Common/test/itkVersorTest.cxx:28: In file included from /<>/Modules/Core/Common/include/itkVersor.h:21: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkObjectFactoryTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkANTSNeighborhoodCorrelationImageToImageMetricv4Test.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkANTSNeighborhoodCorrelationImageToImageMetricv4Test.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkANTSNeighborhoodCorrelationImageToImageMetricv4Test.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkANTSNeighborhoodCorrelationImageToImageRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkObjectFactoryTest2.cxx.o -c /<>/Modules/Core/Common/test/itkObjectFactoryTest2.cxx In file included from /<>/Modules/Core/Common/test/itkObjectFactoryTest2.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkObjectFactoryTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkObjectFactoryTest3.cxx.o -c /<>/Modules/Core/Common/test/itkObjectFactoryTest3.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkMinimumMaximumImageCalculatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkMinimumMaximumImageCalculatorTest.cxx.o -c /<>/Modules/Core/Common/test/itkMinimumMaximumImageCalculatorTest.cxx In file included from /<>/Modules/Core/Common/test/itkMinimumMaximumImageCalculatorTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkMinimumMaximumImageCalculator.h:125: In file included from /<>/Modules/Core/Common/include/itkMinimumMaximumImageCalculator.hxx:22: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkSliceIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetWhitakerImage2DWithLaplacianTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetWhitakerImage2DWithLaplacianTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetWhitakerImage2DWithLaplacianTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetWhitakerImage2DWithPropagationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkSliceIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkSliceIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkSliceIteratorTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkMultiThreaderTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkMultiThreaderTest.cxx.o -c /<>/Modules/Core/Common/test/itkMultiThreaderTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkMultiThreaderEnvTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkMultiThreaderEnvTest.cxx.o -c /<>/Modules/Core/Common/test/itkMultiThreaderEnvTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionExclusionIteratorWithIndexTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionExclusionIteratorWithIndexTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageRegionExclusionIteratorWithIndexTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageRegionExclusionIteratorWithIndexTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkFixedArrayTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkFixedArrayTest.cxx.o -c /<>/Modules/Core/Common/test/itkFixedArrayTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkImageTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkImageTransformTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageTransformTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageTransformTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkImageFillBufferTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkImageFillBufferTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageFillBufferTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageFillBufferTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkMemoryLeakTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkMemoryLeakTest.cxx.o -c /<>/Modules/Core/Common/test/itkMemoryLeakTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkVectorGeometryTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkVectorGeometryTest.cxx.o -c /<>/Modules/Core/Common/test/itkVectorGeometryTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkVNLRoundProfileTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkVNLRoundProfileTest1.cxx.o -c /<>/Modules/Core/Common/test/itkVNLRoundProfileTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkZeroFluxBoundaryConditionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetWhitakerImage2DWithPropagationTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetWhitakerImage2DWithPropagationTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkSingleLevelSetWhitakerImage2DWithPropagationTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 40%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkTwoLevelSetDenseImage2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKLabelMap.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKStatistics.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKTransform.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkLabelObjectLine;itkLabelObject;itkShapeLabelObject;itkStatisticsLabelObject;ITKLabelMapBase;itkLabelMapFilter;itkInPlaceLabelMapFilter;itkChangeRegionLabelMapFilter;itkAggregateLabelMapFilter;itkAutoCropLabelMapFilter;itkBinaryFillholeImageFilter;itkBinaryGrindPeakImageFilter;itkBinaryImageToLabelMapFilter;itkBinaryImageToShapeLabelMapFilter;itkBinaryImageToStatisticsLabelMapFilter;itkBinaryNotImageFilter;itkBinaryReconstructionByDilationImageFilter;itkBinaryReconstructionByErosionImageFilter;itkBinaryShapeKeepNObjectsImageFilter;itkBinaryShapeOpeningImageFilter;itkBinaryStatisticsKeepNObjectsImageFilter;itkBinaryStatisticsOpeningImageFilter;itkChangeLabelLabelMapFilter;itkCropLabelMapFilter;itkLabelImageToLabelMapFilter;itkLabelImageToShapeLabelMapFilter;itkLabelImageToStatisticsLabelMapFilter;itkLabelMapMaskImageFilter;itkLabelMapToBinaryImageFilter;itkLabelMapToLabelImageFilter;itkLabelSelectionLabelMapFilter;itkLabelShapeKeepNObjectsImageFilter;itkLabelShapeOpeningImageFilter;itkLabelStatisticsKeepNObjectsImageFilter;itkLabelStatisticsOpeningImageFilter;itkLabelUniqueLabelMapFilter;itkMergeLabelMapFilter;itkObjectByObjectLabelMapFilter;itkPadLabelMapFilter;itkRegionFromReferenceLabelMapFilter;itkRelabelLabelMapFilter;itkShapeKeepNObjectsLabelMapFilter;itkShapeLabelMapFilter;itkShapeOpeningLabelMapFilter;itkShapePositionLabelMapFilter;itkShapeRelabelImageFilter;itkShapeRelabelLabelMapFilter;itkShapeUniqueLabelMapFilter;itkShiftScaleLabelMapFilter;itkStatisticsKeepNObjectsLabelMapFilter;itkStatisticsLabelMapFilter;itkStatisticsOpeningLabelMapFilter;itkStatisticsPositionLabelMapFilter;itkStatisticsRelabelImageFilter;itkStatisticsRelabelLabelMapFilter;itkStatisticsUniqueLabelMapFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 41%] Built target ITKLabelMapSwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/CurvatureFlow/test/CMakeFiles/ITKCurvatureFlowTestDriver.dir/build.make Modules/Filtering/CurvatureFlow/test/CMakeFiles/ITKCurvatureFlowTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/CurvatureFlow/test /<>/BUILD /<>/BUILD/Modules/Filtering/CurvatureFlow/test /<>/BUILD/Modules/Filtering/CurvatureFlow/test/CMakeFiles/ITKCurvatureFlowTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCurvatureFlowTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/CurvatureFlow/test/CMakeFiles/ITKCurvatureFlowTestDriver.dir/build.make Modules/Filtering/CurvatureFlow/test/CMakeFiles/ITKCurvatureFlowTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Filtering/CurvatureFlow/test/CMakeFiles/ITKCurvatureFlowTestDriver.dir/ITKCurvatureFlowTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkZeroFluxBoundaryConditionTest.cxx.o -c /<>/Modules/Core/Common/test/itkZeroFluxBoundaryConditionTest.cxx In file included from /<>/Modules/Core/Common/test/itkZeroFluxBoundaryConditionTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkMemoryProbesCollecterBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkMemoryProbesCollecterBaseTest.cxx.o -c /<>/Modules/Core/Common/test/itkMemoryProbesCollecterBaseTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkImageAlgorithmCopyTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkImageAlgorithmCopyTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageAlgorithmCopyTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageAlgorithmCopyTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageAlgorithm.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkImageAlgorithmCopyTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkANTSNeighborhoodCorrelationImageToImageRegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkANTSNeighborhoodCorrelationImageToImageRegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkANTSNeighborhoodCorrelationImageToImageRegistrationTest.cxx:27: In file included from /<>/Modules/Registration/Metricsv4/include/itkANTSNeighborhoodCorrelationImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkMattesMutualInformationImageToImageMetricv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkImageAlgorithmCopyTest2.cxx.o -c /<>/Modules/Core/Common/test/itkImageAlgorithmCopyTest2.cxx In file included from /<>/Modules/Core/Common/test/itkImageAlgorithmCopyTest2.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageAlgorithm.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkConstantBoundaryConditionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkConstantBoundaryConditionTest.cxx.o -c /<>/Modules/Core/Common/test/itkConstantBoundaryConditionTest.cxx In file included from /<>/Modules/Core/Common/test/itkConstantBoundaryConditionTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkConstantBoundaryCondition.h:22: In file included from /<>/Modules/Core/Common/include/itkImageBoundaryCondition.h:23: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkDataObjectAndProcessObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkTwoLevelSetDenseImage2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkTwoLevelSetDenseImage2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkTwoLevelSetDenseImage2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkTwoLevelSetWhitakerImage2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFilterBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkCastImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFilterBase/test/itkCastImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFilterBase/test/itkCastImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkCastImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Linking CXX executable ../../../../bin/ITKImageFilterBaseTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFilterBase/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageFilterBaseTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageFilterBaseTestDriver.dir/ITKImageFilterBaseTestDriver.cxx.o CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkNeighborhoodOperatorImageFilterTest.cxx.o CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkImageToImageFilterTest.cxx.o CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkVectorNeighborhoodOperatorImageFilterTest.cxx.o CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkMaskNeighborhoodOperatorImageFilterTest.cxx.o CMakeFiles/ITKImageFilterBaseTestDriver.dir/itkCastImageFilterTest.cxx.o -o ../../../../bin/ITKImageFilterBaseTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 41%] Built target ITKImageFilterBaseTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/ImageAdaptors/test/CMakeFiles/ITKImageAdaptorsTestDriver.dir/build.make Modules/Core/ImageAdaptors/test/CMakeFiles/ITKImageAdaptorsTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/ImageAdaptors/test /<>/BUILD /<>/BUILD/Modules/Core/ImageAdaptors/test /<>/BUILD/Modules/Core/ImageAdaptors/test/CMakeFiles/ITKImageAdaptorsTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageAdaptorsTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/ImageAdaptors/test/CMakeFiles/ITKImageAdaptorsTestDriver.dir/build.make Modules/Core/ImageAdaptors/test/CMakeFiles/ITKImageAdaptorsTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageAdaptors/test/CMakeFiles/ITKImageAdaptorsTestDriver.dir/ITKImageAdaptorsTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkDataObjectAndProcessObjectTest.cxx.o -c /<>/Modules/Core/Common/test/itkDataObjectAndProcessObjectTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkOptimizerParametersTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkOptimizerParametersTest.cxx.o -c /<>/Modules/Core/Common/test/itkOptimizerParametersTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkImageVectorOptimizerParametersHelperTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMattesMutualInformationImageToImageMetricv4Test.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkMattesMutualInformationImageToImageMetricv4Test.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkMattesMutualInformationImageToImageMetricv4Test.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkMattesMutualInformationImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkMattesMutualInformationImageToImageMetricv4RegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTestWithMaskAndSampling.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTestWithMaskAndSampling.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkSimpleImageRegistrationTestWithMaskAndSampling.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkBSplineExponentialImageRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkImageVectorOptimizerParametersHelperTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageVectorOptimizerParametersHelperTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageVectorOptimizerParametersHelperTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageVectorOptimizerParametersHelper.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkCompensatedSummationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkCompensatedSummationTest.cxx.o -c /<>/Modules/Core/Common/test/itkCompensatedSummationTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkCompensatedSummationTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkCompensatedSummationTest2.cxx.o -c /<>/Modules/Core/Common/test/itkCompensatedSummationTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkEnableIfTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkEnableIfTest.cxx.o -c /<>/Modules/Core/Common/test/itkEnableIfTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionConstIteratorWithOnlyIndexTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionConstIteratorWithOnlyIndexTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageRegionConstIteratorWithOnlyIndexTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageRegionConstIteratorWithOnlyIndexTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithOnlyIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithOnlyIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkImageRandomConstIteratorWithOnlyIndexTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkTwoLevelSetWhitakerImage2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkTwoLevelSetWhitakerImage2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkTwoLevelSetWhitakerImage2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkTwoLevelSetMalcolmImage2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/CurvatureFlow/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCurvatureFlowTestDriver.dir/ITKCurvatureFlowTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/CurvatureFlow/test/ITKCurvatureFlowTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/CurvatureFlow/test/ITKCurvatureFlowTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Filtering/CurvatureFlow/test/CMakeFiles/ITKCurvatureFlowTestDriver.dir/itkBinaryMinMaxCurvatureFlowImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkImageRandomConstIteratorWithOnlyIndexTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageRandomConstIteratorWithOnlyIndexTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageRandomConstIteratorWithOnlyIndexTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkConstNeighborhoodIteratorWithOnlyIndexTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkExponentialImageRegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkExponentialImageRegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkExponentialImageRegistrationTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkTimeVaryingBSplineVelocityFieldImageRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkConstNeighborhoodIteratorWithOnlyIndexTest.cxx.o -c /<>/Modules/Core/Common/test/itkConstNeighborhoodIteratorWithOnlyIndexTest.cxx In file included from /<>/Modules/Core/Common/test/itkConstNeighborhoodIteratorWithOnlyIndexTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodIteratorTestCommon.hxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkImageToImageToleranceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/CurvatureFlow/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCurvatureFlowTestDriver.dir/itkBinaryMinMaxCurvatureFlowImageFilterTest.cxx.o -c /<>/Modules/Filtering/CurvatureFlow/test/itkBinaryMinMaxCurvatureFlowImageFilterTest.cxx In file included from /<>/Modules/Filtering/CurvatureFlow/test/itkBinaryMinMaxCurvatureFlowImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/CurvatureFlow/include/itkBinaryMinMaxCurvatureFlowImageFilter.h:21: In file included from /<>/Modules/Filtering/CurvatureFlow/include/itkMinMaxCurvatureFlowImageFilter.h:21: In file included from /<>/Modules/Filtering/CurvatureFlow/include/itkCurvatureFlowImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Filtering/CurvatureFlow/test/CMakeFiles/ITKCurvatureFlowTestDriver.dir/itkCurvatureFlowTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkImageToImageToleranceTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageToImageToleranceTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageToImageToleranceTest.cxx:18: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionSplitterSlowDimensionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionSplitterSlowDimensionTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageRegionSplitterSlowDimensionTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageRegionSplitterSlowDimensionTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterSlowDimension.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionSplitterDirectionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionSplitterDirectionTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageRegionSplitterDirectionTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageRegionSplitterDirectionTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterDirection.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionSplitterMultidimensionalTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionSplitterMultidimensionalTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageRegionSplitterMultidimensionalTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageRegionSplitterMultidimensionalTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterMultidimensional.h:23: In file included from /<>/Modules/Core/Common/include/itkImageRegionSplitterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkSimpleFastMutexLockTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/CurvatureFlow/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCurvatureFlowTestDriver.dir/itkCurvatureFlowTest.cxx.o -c /<>/Modules/Filtering/CurvatureFlow/test/itkCurvatureFlowTest.cxx In file included from /<>/Modules/Filtering/CurvatureFlow/test/itkCurvatureFlowTest.cxx:19: In file included from /<>/Modules/Filtering/CurvatureFlow/include/itkCurvatureFlowImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkSimpleFastMutexLockTest.cxx.o -c /<>/Modules/Core/Common/test/itkSimpleFastMutexLockTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Linking CXX executable ../../../../bin/ITKCurvatureFlowTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkMetaDataObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/CurvatureFlow/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCurvatureFlowTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCurvatureFlowTestDriver.dir/ITKCurvatureFlowTestDriver.cxx.o CMakeFiles/ITKCurvatureFlowTestDriver.dir/itkBinaryMinMaxCurvatureFlowImageFilterTest.cxx.o CMakeFiles/ITKCurvatureFlowTestDriver.dir/itkCurvatureFlowTest.cxx.o -o ../../../../bin/ITKCurvatureFlowTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 41%] Built target ITKCurvatureFlowTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/build.make Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Statistics/test /<>/BUILD /<>/BUILD/Modules/Numerics/Statistics/test /<>/BUILD/Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKStatisticsTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/build.make Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/ITKStatisticsTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkMetaDataObjectTest.cxx.o -c /<>/Modules/Core/Common/test/itkMetaDataObjectTest.cxx In file included from /<>/Modules/Core/Common/test/itkMetaDataObjectTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkMetaDataObject.h:34: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkThreadPoolTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadPoolTest.cxx.o -c /<>/Modules/Core/Common/test/itkThreadPoolTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkSpawnThreadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkSpawnThreadTest.cxx.o -c /<>/Modules/Core/Common/test/itkSpawnThreadTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkAtomicIntTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkTwoLevelSetMalcolmImage2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkTwoLevelSetMalcolmImage2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkTwoLevelSetMalcolmImage2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkTwoLevelSetShiImage2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkAtomicIntTest.cxx.o -c /<>/Modules/Core/Common/test/itkAtomicIntTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon2TestDriver.dir/itkDownCastTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon2TestDriver.dir/itkDownCastTest.cxx.o -c /<>/Modules/Core/Common/test/itkDownCastTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Linking CXX executable ../../../../bin/ITKCommon2TestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageAdaptors/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageAdaptorsTestDriver.dir/ITKImageAdaptorsTestDriver.cxx.o -c /<>/BUILD/Modules/Core/ImageAdaptors/test/ITKImageAdaptorsTestDriver.cxx In file included from /<>/BUILD/Modules/Core/ImageAdaptors/test/ITKImageAdaptorsTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageAdaptors/test/CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkComplexConjugateImageAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommon2TestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCommon2TestDriver.dir/ITKCommon2TestDriver.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkMetaProgrammingLibraryTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkIsConvertible.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkIsBaseOf.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkPromoteType.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedIndexedContainerPartitionerTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedIteratorRangePartitionerTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedIteratorRangePartitionerTest2.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedIteratorRangePartitionerTest3.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadedImageRegionPartitionerTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkMetaDataDictionaryTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkStdStreamLogOutputTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkOctreeTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkLoggerThreadWrapperTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadLoggerTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadDefsTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkTimeProbesTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkTreeContainerTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkVariableLengthVectorTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkSpatialFunctionTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkPeriodicBoundaryConditionTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkSmartPointerTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkBarrierTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkVariableSizeMatrixTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkConicShellInteriorExteriorSpatialFunctionTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkEllipsoidInteriorExteriorSpatialFunctionTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkFrustumSpatialFunctionTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkTorusInteriorExteriorSpatialFunctionTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkTimeStampTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkConstNeighborhoodIteratorTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkShapedNeighborhoodIteratorTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkSizeTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkMatrixTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkAutoPointerTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkNeighborhoodIteratorTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkLoggerManagerTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkBSplineInterpolationWeightFunctionTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkSymmetricSecondRankTensorTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkConstShapedNeighborhoodIteratorTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkConstShapedNeighborhoodIteratorTest2.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkSTLContainerAdaptorTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkFiniteCylinderSpatialFunctionTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkLoggerOutputTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkNeighborhoodTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkVersorTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkObjectFactoryTest2.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkObjectFactoryTest3.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkMinimumMaximumImageCalculatorTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkSliceIteratorTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkMultiThreaderTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkMultiThreaderEnvTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionExclusionIteratorWithIndexTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkFixedArrayTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkImageTransformTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkImageFillBufferTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkMemoryLeakTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkVectorGeometryTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkVNLRoundProfileTest1.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkZeroFluxBoundaryConditionTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkMemoryProbesCollecterBaseTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkImageAlgorithmCopyTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkImageAlgorithmCopyTest2.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkConstantBoundaryConditionTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkDataObjectAndProcessObjectTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkOptimizerParametersTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkImageVectorOptimizerParametersHelperTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkCompensatedSummationTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkCompensatedSummationTest2.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkEnableIfTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionConstIteratorWithOnlyIndexTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkImageRandomConstIteratorWithOnlyIndexTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkConstNeighborhoodIteratorWithOnlyIndexTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkImageToImageToleranceTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionSplitterSlowDimensionTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionSplitterDirectionTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkImageRegionSplitterMultidimensionalTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkSimpleFastMutexLockTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkMetaDataObjectTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkThreadPoolTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkSpawnThreadTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkAtomicIntTest.cxx.o CMakeFiles/ITKCommon2TestDriver.dir/itkDownCastTest.cxx.o -o ../../../../bin/ITKCommon2TestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../Testing/Temporary/libClientTestLibraryA.so ../../../../Testing/Temporary/libClientTestLibraryC.so ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 41%] Built target ITKCommon2TestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/build.make Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Transform/test /<>/BUILD /<>/BUILD/Modules/Core/Transform/test /<>/BUILD/Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTransformTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/build.make Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/ITKTransformTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageAdaptors/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkComplexConjugateImageAdaptorTest.cxx.o -c /<>/Modules/Core/ImageAdaptors/test/itkComplexConjugateImageAdaptorTest.cxx In file included from /<>/Modules/Core/ImageAdaptors/test/itkComplexConjugateImageAdaptorTest.cxx:19: In file included from /<>/Modules/Core/ImageAdaptors/include/itkComplexConjugateImageAdaptor.h:21: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageAdaptors/test/CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkImageAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMattesMutualInformationImageToImageMetricv4RegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkMattesMutualInformationImageToImageMetricv4RegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkMattesMutualInformationImageToImageMetricv4RegistrationTest.cxx:27: In file included from /<>/Modules/Registration/Metricsv4/include/itkMattesMutualInformationImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkMultiStartImageToImageMetricv4RegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageAdaptors/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkImageAdaptorTest.cxx.o -c /<>/Modules/Core/ImageAdaptors/test/itkImageAdaptorTest.cxx In file included from /<>/Modules/Core/ImageAdaptors/test/itkImageAdaptorTest.cxx:33: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageAdaptors/test/CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkNthElementPixelAccessorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageAdaptors/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkNthElementPixelAccessorTest.cxx.o -c /<>/Modules/Core/ImageAdaptors/test/itkNthElementPixelAccessorTest.cxx In file included from /<>/Modules/Core/ImageAdaptors/test/itkNthElementPixelAccessorTest.cxx:33: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageAdaptors/test/CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkRGBToVectorImageAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageAdaptors/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkRGBToVectorImageAdaptorTest.cxx.o -c /<>/Modules/Core/ImageAdaptors/test/itkRGBToVectorImageAdaptorTest.cxx In file included from /<>/Modules/Core/ImageAdaptors/test/itkRGBToVectorImageAdaptorTest.cxx:28: In file included from /<>/Modules/Core/ImageAdaptors/include/itkRGBToVectorImageAdaptor.h:21: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageAdaptors/test/CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkVectorImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkTwoLevelSetShiImage2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkTwoLevelSetShiImage2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkTwoLevelSetShiImage2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetDenseImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetDenseImageTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetDenseImageTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetDenseImageTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDenseImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkDiscreteLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetBase.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetChanAndVeseInternalTermTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageAdaptors/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkVectorImageTest.cxx.o -c /<>/Modules/Core/ImageAdaptors/test/itkVectorImageTest.cxx In file included from /<>/Modules/Core/ImageAdaptors/test/itkVectorImageTest.cxx:21: In file included from /<>/Modules/Core/ImageAdaptors/include/itkVectorImageToImageAdaptor.h:21: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageAdaptors/test/CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkVectorImageToImageAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageAdaptors/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkVectorImageToImageAdaptorTest.cxx.o -c /<>/Modules/Core/ImageAdaptors/test/itkVectorImageToImageAdaptorTest.cxx In file included from /<>/Modules/Core/ImageAdaptors/test/itkVectorImageToImageAdaptorTest.cxx:20: In file included from /<>/Modules/Core/ImageAdaptors/include/itkVectorImageToImageAdaptor.h:21: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Linking CXX executable ../../../../bin/ITKImageAdaptorsTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageAdaptors/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageAdaptorsTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageAdaptorsTestDriver.dir/ITKImageAdaptorsTestDriver.cxx.o CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkComplexConjugateImageAdaptorTest.cxx.o CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkImageAdaptorTest.cxx.o CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkNthElementPixelAccessorTest.cxx.o CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkRGBToVectorImageAdaptorTest.cxx.o CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkVectorImageTest.cxx.o CMakeFiles/ITKImageAdaptorsTestDriver.dir/itkVectorImageToImageAdaptorTest.cxx.o -o ../../../../bin/ITKImageAdaptorsTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 41%] Built target ITKImageAdaptorsTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/build.make Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/ImageFunction/test /<>/BUILD /<>/BUILD/Modules/Core/ImageFunction/test /<>/BUILD/Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFunctionTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/build.make Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/ITKImageFunctionTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetChanAndVeseInternalTermTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetChanAndVeseInternalTermTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetChanAndVeseInternalTermTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainer.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainerBase.h:26: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDomainMapImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetEvolutionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/ITKStatisticsTestDriver.cxx.o -c /<>/BUILD/Modules/Numerics/Statistics/test/ITKStatisticsTestDriver.cxx In file included from /<>/BUILD/Modules/Numerics/Statistics/test/ITKStatisticsTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkDecisionRuleTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkDecisionRuleTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkDecisionRuleTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkDenseFrequencyContainer2Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkDenseFrequencyContainer2Test.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkDenseFrequencyContainer2Test.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkDenseFrequencyContainer2Test.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkDenseFrequencyContainer2.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkExpectationMaximizationMixtureModelEstimatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMultiStartImageToImageMetricv4RegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkMultiStartImageToImageMetricv4RegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkMultiStartImageToImageMetricv4RegistrationTest.cxx:27: In file included from /<>/Modules/Registration/Metricsv4/include/itkMattesMutualInformationImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkMultiGradientImageToImageMetricv4RegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/ITKTransformTestDriver.cxx.o -c /<>/BUILD/Modules/Core/Transform/test/ITKTransformTestDriver.cxx In file included from /<>/BUILD/Modules/Core/Transform/test/ITKTransformTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkFixedCenterOfRotationAffineTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkExpectationMaximizationMixtureModelEstimatorTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkExpectationMaximizationMixtureModelEstimatorTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkExpectationMaximizationMixtureModelEstimatorTest.cxx:22: In file included from /<>/Modules/Numerics/Statistics/include/itkPointSetToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkGaussianDistributionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkFixedCenterOfRotationAffineTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkFixedCenterOfRotationAffineTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkFixedCenterOfRotationAffineTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkFixedCenterOfRotationAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkAffineTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkGaussianDistributionTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkGaussianDistributionTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkGaussianMembershipFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkGaussianMembershipFunctionTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkGaussianMembershipFunctionTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkGaussianMembershipFunctionTest.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkGaussianMembershipFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkGaussianMixtureModelComponentTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetEvolutionTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetEvolutionTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetEvolutionTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainer.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetContainerBase.h:26: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetDomainMapImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetDenseImageSubset2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkAffineTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkAffineTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkAffineTransformTest.cxx:22: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkScaleSkewVersor3DTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkGaussianMixtureModelComponentTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkGaussianMixtureModelComponentTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkGaussianMixtureModelComponentTest.cxx:22: In file included from /<>/Modules/Numerics/Statistics/include/itkPointSetToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkGaussianRandomSpatialNeighborSubsamplerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkScaleSkewVersor3DTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkScaleSkewVersor3DTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkScaleSkewVersor3DTransformTest.cxx:27: In file included from /<>/Modules/Core/Transform/include/itkScaleSkewVersor3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkScaleSkewVersor3DTransformTest.cxx:27: In file included from /<>/Modules/Core/Transform/include/itkScaleSkewVersor3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/include/itkScaleSkewVersor3DTransform.h:55:10: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here public VersorRigid3DTransform ^ /<>/Modules/Core/Transform/test/itkScaleSkewVersor3DTransformTest.cxx:46:14: note: in instantiation of template class 'itk::ScaleSkewVersor3DTransform' requested here typedef TransformType::VersorType VersorType; ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Core/Transform/test/itkScaleSkewVersor3DTransformTest.cxx:27: In file included from /<>/Modules/Core/Transform/include/itkScaleSkewVersor3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/include/itkScaleSkewVersor3DTransform.h:55:10: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here public VersorRigid3DTransform ^ /<>/Modules/Core/Transform/test/itkScaleSkewVersor3DTransformTest.cxx:46:14: note: in instantiation of template class 'itk::ScaleSkewVersor3DTransform' requested here typedef TransformType::VersorType VersorType; ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkEuler3DTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkGaussianRandomSpatialNeighborSubsamplerTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkGaussianRandomSpatialNeighborSubsamplerTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkGaussianRandomSpatialNeighborSubsamplerTest.cxx:23: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToNeighborhoodSampleAdaptor.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkKalmanLinearEstimatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkEuler3DTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkEuler3DTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkEuler3DTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkEuler3DTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Core/Transform/test/itkEuler3DTransformTest.cxx:34:3: note: in instantiation of template class 'itk::Euler3DTransform' requested here EulerTransformType::Pointer eulerTransform = EulerTransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkCenteredRigid2DTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkKalmanLinearEstimatorTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkKalmanLinearEstimatorTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeBasedKmeansEstimatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkCenteredRigid2DTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkCenteredRigid2DTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkCenteredRigid2DTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkCenteredRigid2DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid2DTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkEuler2DTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetDenseImageSubset2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetDenseImageSubset2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetDenseImageSubset2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetWhitakerImageSubset2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeBasedKmeansEstimatorTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkKdTreeBasedKmeansEstimatorTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkKdTreeBasedKmeansEstimatorTest.cxx:22: In file included from /<>/Modules/Numerics/Statistics/include/itkPointSetToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeGeneratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkEuler2DTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkEuler2DTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkEuler2DTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkEuler2DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid2DTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkRigid3DTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkBSplineExponentialImageRegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkBSplineExponentialImageRegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkBSplineExponentialImageRegistrationTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkTimeVaryingVelocityFieldImageRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeGeneratorTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkKdTreeGeneratorTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkKdTreeGeneratorTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkRigid3DTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkRigid3DTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkRigid3DTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkRigid3DTransformTest.cxx:21: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/test/itkRigid3DTransformTest.cxx:26:42: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class Rigid3DTransformSurrogate : public Rigid3DTransform < TScalar > ^ /<>/Modules/Core/Transform/test/itkRigid3DTransformTest.cxx:70:5: note: in instantiation of template class 'itk::Rigid3DTransformSurrogate' requested here TransformType::Pointer r1 = TransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkScaleVersor3DTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/ITKImageFunctionTestDriver.cxx.o -c /<>/BUILD/Modules/Core/ImageFunction/test/ITKImageFunctionTestDriver.cxx In file included from /<>/BUILD/Modules/Core/ImageFunction/test/ITKImageFunctionTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkGaussianBlurImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeTest1.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkKdTreeTest1.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkKdTreeTest1.cxx:21: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMultiGradientImageToImageMetricv4RegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkMultiGradientImageToImageMetricv4RegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkMultiGradientImageToImageMetricv4RegistrationTest.cxx:27: In file included from /<>/Modules/Registration/Metricsv4/include/itkMattesMutualInformationImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkMetricImageGradientTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkScaleVersor3DTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkScaleVersor3DTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkScaleVersor3DTransformTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkScaleVersor3DTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkScaleVersor3DTransformTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkScaleVersor3DTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/include/itkScaleVersor3DTransform.h:49:59: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here class ITK_TEMPLATE_EXPORT ScaleVersor3DTransform : public VersorRigid3DTransform ^ /<>/Modules/Core/Transform/test/itkScaleVersor3DTransformTest.cxx:22:36: note: in instantiation of template class 'itk::ScaleVersor3DTransform' requested here class TransformHelperType : public itk::ScaleVersor3DTransform ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Core/Transform/test/itkScaleVersor3DTransformTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkScaleVersor3DTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/include/itkScaleVersor3DTransform.h:49:59: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here class ITK_TEMPLATE_EXPORT ScaleVersor3DTransform : public VersorRigid3DTransform ^ /<>/Modules/Core/Transform/test/itkScaleVersor3DTransformTest.cxx:22:36: note: in instantiation of template class 'itk::ScaleVersor3DTransform' requested here class TransformHelperType : public itk::ScaleVersor3DTransform ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkKdTreeTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkKdTreeTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkGaussianBlurImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkGaussianBlurImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkGaussianBlurImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/ImageFunction/include/itkGaussianBlurImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkNeighborhoodOperatorImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkVectorInterpolateImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkRigid3DPerspectiveTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkVectorInterpolateImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkVectorInterpolateImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkVectorInterpolateImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/ImageFunction/include/itkVectorLinearInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkVectorInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkVarianceImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeTest3.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkKdTreeTest3.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkKdTreeTest3.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeTestSamplePoints.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkRigid3DPerspectiveTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkRigid3DPerspectiveTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkRigid3DPerspectiveTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkRigid3DPerspectiveTransform.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkSimilarity2DTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkVarianceImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkVarianceImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkVarianceImageFunctionTest.cxx:21: In file included from /<>/Modules/Core/ImageFunction/include/itkVarianceImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkMedianImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetWhitakerImageSubset2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetWhitakerImageSubset2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetWhitakerImageSubset2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetShiImageSubset2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeTestSamplePoints.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkKdTreeTestSamplePoints.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkKdTreeTestSamplePoints.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMaximumDecisionRuleTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMaximumDecisionRuleTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMaximumDecisionRuleTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMinimumDecisionRuleTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMinimumDecisionRuleTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMinimumDecisionRuleTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMaximumRatioDecisionRuleTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMaximumRatioDecisionRuleTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMaximumRatioDecisionRuleTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMeanSampleFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkMedianImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkMedianImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkMedianImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/ImageFunction/include/itkMedianImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkBinaryThresholdImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkSimilarity2DTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkSimilarity2DTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkSimilarity2DTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkCenteredSimilarity2DTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkSimilarity2DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid2DTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkTranslationTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMeanSampleFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMeanSampleFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkMeanSampleFilterTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkMeanSampleFilter.h:119: In file included from /<>/Modules/Numerics/Statistics/include/itkMeanSampleFilter.hxx:25: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMeanSampleFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkBinaryThresholdImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkBinaryThresholdImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkBinaryThresholdImageFunctionTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkBSplineDecompositionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkTranslationTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkTranslationTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkTranslationTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkIdentityTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMeanSampleFilterTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMeanSampleFilterTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkMeanSampleFilterTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkMeanSampleFilter.h:119: In file included from /<>/Modules/Numerics/Statistics/include/itkMeanSampleFilter.hxx:25: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMeanSampleFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkTimeVaryingBSplineVelocityFieldImageRegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkTimeVaryingBSplineVelocityFieldImageRegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkTimeVaryingBSplineVelocityFieldImageRegistrationTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4RegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkIdentityTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkIdentityTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkIdentityTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkIdentityTransform.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkv3Rigid3DTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMeanSampleFilterTest3.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMeanSampleFilterTest3.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkMeanSampleFilterTest3.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkMeanSampleFilter.h:119: In file included from /<>/Modules/Numerics/Statistics/include/itkMeanSampleFilter.hxx:25: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkHistogramTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkv3Rigid3DTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkv3Rigid3DTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkv3Rigid3DTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkv3Rigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkv3Rigid3DTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkv3Rigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkv3Rigid3DTransform.h:62:12: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public itk::Rigid3DTransform ^ /<>/Modules/Core/Transform/test/itkv3Rigid3DTransformTest.cxx:36:12: note: in instantiation of template class 'itkv3::Rigid3DTransform' requested here itkv3::Rigid3DTransform::Pointer r1=itkv3::Rigid3DTransform::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkCenteredAffineTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkBSplineDecompositionImageFilterTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkBSplineDecompositionImageFilterTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkBSplineDecompositionImageFilterTest.cxx:30: In file included from /<>/Modules/Core/ImageFunction/test/makeRandomImageBsplineInterpolator.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkBSplineResampleImageFunction.h:31: In file included from /<>/Modules/Core/ImageFunction/include/itkBSplineInterpolateImageFunction.h:33: In file included from /<>/Modules/Core/ImageFunction/include/itkInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkBSplineInterpolateImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetShiImageSubset2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetShiImageSubset2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetShiImageSubset2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetMalcolmImageSubset2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkHistogramTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkHistogramTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkHistogramTest.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkHistogramToTextureFeaturesFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkCenteredAffineTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkCenteredAffineTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkCenteredAffineTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkCenteredAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkRigid2DTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkHistogramToTextureFeaturesFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkHistogramToTextureFeaturesFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkHistogramToTextureFeaturesFilterTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogramToTextureFeaturesFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkHistogramToTextureFeaturesFilterNaNTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMetricImageGradientTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkMetricImageGradientTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkMetricImageGradientTest.cxx:18: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4RegistrationTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkRigid2DTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkRigid2DTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkRigid2DTransformTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkRigid2DTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkScaleLogarithmicTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkHistogramToTextureFeaturesFilterNaNTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkHistogramToTextureFeaturesFilterNaNTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkHistogramToTextureFeaturesFilterNaNTest.cxx:21: In file included from /<>/Modules/Numerics/Statistics/include/itkScalarImageToCooccurrenceMatrixFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkChiSquareDistributionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkChiSquareDistributionTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkChiSquareDistributionTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkCovarianceSampleFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkScaleLogarithmicTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkScaleLogarithmicTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkScaleLogarithmicTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkScaleLogarithmicTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkScaleTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkQuaternionRigidTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkBSplineInterpolateImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkBSplineInterpolateImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkBSplineInterpolateImageFunctionTest.cxx:31: In file included from /<>/Modules/Core/ImageFunction/include/itkBSplineInterpolateImageFunction.h:33: In file included from /<>/Modules/Core/ImageFunction/include/itkInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkBSplineResampleImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkCovarianceSampleFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkCovarianceSampleFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkCovarianceSampleFilterTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkCovarianceSampleFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkQuaternionRigidTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkQuaternionRigidTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkQuaternionRigidTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkQuaternionRigidTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkQuaternionRigidTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkQuaternionRigidTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkQuaternionRigidTransform.h:49:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Core/Transform/test/itkQuaternionRigidTransformTest.cxx:36:5: note: in instantiation of template class 'itk::QuaternionRigidTransform' requested here TransformType::Pointer identityTransform = TransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkScaleTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetMalcolmImageSubset2DTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetMalcolmImageSubset2DTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkMultiLevelSetMalcolmImageSubset2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Segmentation/LevelSetsv4/test/CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEvolutionNumberOfIterationsStoppingCriterionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkCovarianceSampleFilterTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkCovarianceSampleFilterTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkCovarianceSampleFilterTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkCovarianceSampleFilter.h:23: In file included from /<>/Modules/Core/Common/include/itkVariableSizeMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkCovarianceSampleFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEvolutionNumberOfIterationsStoppingCriterionTest.cxx.o -c /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEvolutionNumberOfIterationsStoppingCriterionTest.cxx In file included from /<>/Modules/Segmentation/LevelSetsv4/test/itkLevelSetEvolutionNumberOfIterationsStoppingCriterionTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkWhitakerSparseLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetSparseImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkDiscreteLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetImage.h:22: In file included from /<>/Modules/Segmentation/LevelSetsv4/include/itkLevelSetBase.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Linking CXX executable ../../../../bin/ITKLevelSetsv4TestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkBSplineResampleImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkBSplineResampleImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkBSplineResampleImageFunctionTest.cxx:30: In file included from /<>/Modules/Core/ImageFunction/test/makeRandomImageBsplineInterpolator.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkBSplineResampleImageFunction.h:31: In file included from /<>/Modules/Core/ImageFunction/include/itkBSplineInterpolateImageFunction.h:33: In file included from /<>/Modules/Core/ImageFunction/include/itkInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkScatterMatrixImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkScaleTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkScaleTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkScaleTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkScaleTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkSimilarity3DTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSetsv4/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLevelSetsv4TestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKLevelSetsv4TestDriver.dir/ITKLevelSetsv4TestDriver.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDenseImageTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkWhitakerSparseLevelSetImageTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkShiSparseLevelSetImageTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMalcolmSparseLevelSetImageTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkBinaryImageToWhitakerSparseLevelSetAdaptorTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkBinaryImageToMalcolmSparseLevelSetAdaptorTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkBinaryImageToShiSparseLevelSetAdaptorTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationChanAndVeseExternalTermTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationChanAndVeseInternalTermTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationCurvatureTermTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationLaplacianTermTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationPropagationTermTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationBinaryMaskTermTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationOverlapPenaltyTermTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationRegionTermTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationTermBaseTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEquationTermContainerTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDomainPartitionBaseTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDomainPartitionImageTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDomainPartitionImageWithKdTreeTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetDomainMapImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkDenseLevelSetContainerTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSparseLevelSetContainerTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetDenseImage2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetDenseAdvectionImage2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetWhitakerImage2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetMalcolmImage2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetShiImage2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetWhitakerImage2DWithCurvatureTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetWhitakerImage2DWithLaplacianTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkSingleLevelSetWhitakerImage2DWithPropagationTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkTwoLevelSetDenseImage2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkTwoLevelSetWhitakerImage2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkTwoLevelSetMalcolmImage2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkTwoLevelSetShiImage2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetDenseImageTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetChanAndVeseInternalTermTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetEvolutionTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetDenseImageSubset2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetWhitakerImageSubset2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetShiImageSubset2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkMultiLevelSetMalcolmImageSubset2DTest.cxx.o CMakeFiles/ITKLevelSetsv4TestDriver.dir/itkLevelSetEvolutionNumberOfIterationsStoppingCriterionTest.cxx.o -o ../../../../bin/ITKLevelSetsv4TestDriver ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 41%] Built target ITKLevelSetsv4TestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/build.make Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageGrid/test /<>/BUILD /<>/BUILD/Modules/Filtering/ImageGrid/test /<>/BUILD/Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageGridTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/build.make Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 41%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/ITKImageGridTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkCovarianceSampleFilterTest3.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkCovarianceSampleFilterTest3.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkCovarianceSampleFilterTest3.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkCovarianceSampleFilter.h:23: In file included from /<>/Modules/Core/Common/include/itkVariableSizeMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCovarianceSampleFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkScatterMatrixImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkScatterMatrixImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkScatterMatrixImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/ImageFunction/include/itkScatterMatrixImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkMeanImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkSimilarity3DTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkSimilarity3DTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkSimilarity3DTransformTest.cxx:27: In file included from /<>/Modules/Core/Transform/include/itkSimilarity3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkSimilarity3DTransformTest.cxx:27: In file included from /<>/Modules/Core/Transform/include/itkSimilarity3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/include/itkSimilarity3DTransform.h:48:10: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here public VersorRigid3DTransform ^ /<>/Modules/Core/Transform/test/itkSimilarity3DTransformTest.cxx:44:14: note: in instantiation of template class 'itk::Similarity3DTransform' requested here typedef TransformType::VersorType VersorType; ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Core/Transform/test/itkSimilarity3DTransformTest.cxx:27: In file included from /<>/Modules/Core/Transform/include/itkSimilarity3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/include/itkSimilarity3DTransform.h:48:10: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here public VersorRigid3DTransform ^ /<>/Modules/Core/Transform/test/itkSimilarity3DTransformTest.cxx:44:14: note: in instantiation of template class 'itk::Similarity3DTransform' requested here typedef TransformType::VersorType VersorType; ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkAzimuthElevationToCartesianTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCovarianceSampleFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkWeightedCovarianceSampleFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkWeightedCovarianceSampleFilterTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkWeightedCovarianceSampleFilter.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkCovarianceSampleFilter.h:23: In file included from /<>/Modules/Core/Common/include/itkVariableSizeMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCovarianceSampleFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkMeanImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkMeanImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkMeanImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/ImageFunction/include/itkMeanImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkGaussianDerivativeImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4RegistrationTest2.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4RegistrationTest2.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4RegistrationTest2.cxx:29: In file included from /<>/Modules/Registration/Metricsv4/include/itkMeanSquaresImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkImageToImageMetricv4RegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkAzimuthElevationToCartesianTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkAzimuthElevationToCartesianTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkAzimuthElevationToCartesianTransformTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkAzimuthElevationToCartesianTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkCenteredEuler3DTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCovarianceSampleFilterTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkWeightedCovarianceSampleFilterTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkWeightedCovarianceSampleFilterTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkWeightedCovarianceSampleFilter.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkCovarianceSampleFilter.h:23: In file included from /<>/Modules/Core/Common/include/itkVariableSizeMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedMeanSampleFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4RegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4RegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4RegistrationTest.cxx:27: In file included from /<>/Modules/Registration/Metricsv4/include/itkMeanSquaresImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkDemonsImageToImageMetricv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedMeanSampleFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkWeightedMeanSampleFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkWeightedMeanSampleFilterTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkWeightedMeanSampleFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkMeanSampleFilter.h:119: In file included from /<>/Modules/Numerics/Statistics/include/itkMeanSampleFilter.hxx:25: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCentroidKdTreeGeneratorTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkCenteredEuler3DTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkCenteredEuler3DTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkCenteredEuler3DTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkCenteredEuler3DTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:38:10: note: in instantiation of template class 'itk::Euler3DTransform' requested here public Euler3DTransform ^ /<>/Modules/Core/Transform/test/itkCenteredEuler3DTransformTest.cxx:34:3: note: in instantiation of template class 'itk::CenteredEuler3DTransform' requested here EulerTransformType::Pointer eulerTransform = EulerTransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkTransformsSetParametersTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkGaussianDerivativeImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkGaussianDerivativeImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkGaussianDerivativeImageFunctionTest.cxx:19: In file included from /<>/Modules/Core/ImageFunction/include/itkGaussianDerivativeImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkNeighborhoodOperatorImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkCentralDifferenceImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCentroidKdTreeGeneratorTest1.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkWeightedCentroidKdTreeGeneratorTest1.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkWeightedCentroidKdTreeGeneratorTest1.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCentroidKdTreeGeneratorTest8.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkCentralDifferenceImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkCentralDifferenceImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkCentralDifferenceImageFunctionTest.cxx:19: In file included from /<>/Modules/Core/ImageFunction/include/itkCentralDifferenceImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkCentralDifferenceImageFunctionOnVectorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCentroidKdTreeGeneratorTest8.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkWeightedCentroidKdTreeGeneratorTest8.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkWeightedCentroidKdTreeGeneratorTest8.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCentroidKdTreeGeneratorTest9.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCentroidKdTreeGeneratorTest9.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkWeightedCentroidKdTreeGeneratorTest9.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkWeightedCentroidKdTreeGeneratorTest9.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMahalanobisDistanceMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkTransformsSetParametersTest.cxx.o -c /<>/Modules/Core/Transform/test/itkTransformsSetParametersTest.cxx In file included from /<>/Modules/Core/Transform/test/itkTransformsSetParametersTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkCenteredAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkTransformsSetParametersTest.cxx:20: In file included from /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:38:10: note: in instantiation of template class 'itk::Euler3DTransform' requested here public Euler3DTransform ^ /<>/Modules/Core/Transform/test/itkTransformsSetParametersTest.cxx:142:3: note: in instantiation of template class 'itk::CenteredEuler3DTransform' requested here CenteredEuler3D::Pointer centeredEuler3D = ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Core/Transform/test/itkTransformsSetParametersTest.cxx:28: In file included from /<>/Modules/Core/Transform/include/itkScaleSkewVersor3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/include/itkScaleSkewVersor3DTransform.h:55:10: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here public VersorRigid3DTransform ^ /<>/Modules/Core/Transform/test/itkTransformsSetParametersTest.cxx:309:3: note: in instantiation of template class 'itk::ScaleSkewVersor3DTransform' requested here ScaleSkewVersor3D::Pointer scaleSkewVersor3D = ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkBSplineDeformableTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMahalanobisDistanceMetricTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMahalanobisDistanceMetricTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkMahalanobisDistanceMetricTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkMahalanobisDistanceMetric.h:29: In file included from /<>/Modules/Numerics/Statistics/include/itkDistanceMetric.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkManhattanDistanceMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkManhattanDistanceMetricTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkManhattanDistanceMetricTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkManhattanDistanceMetricTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkManhattanDistanceMetric.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkDistanceMetric.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipFunctionBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipFunctionBaseTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMembershipFunctionBaseTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkMembershipFunctionBaseTest.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipFunctionBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipFunctionBaseTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipFunctionBaseTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMembershipFunctionBaseTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkMembershipFunctionBaseTest2.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipFunctionBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipSampleTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkDemonsImageToImageMetricv4Test.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkDemonsImageToImageMetricv4Test.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkDemonsImageToImageMetricv4Test.cxx:18: In file included from /<>/Modules/Registration/Metricsv4/include/itkDemonsImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkDemonsImageToImageMetricv4RegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkCentralDifferenceImageFunctionOnVectorTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkCentralDifferenceImageFunctionOnVectorTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkCentralDifferenceImageFunctionOnVectorTest.cxx:20: In file included from /<>/Modules/Core/ImageFunction/include/itkCentralDifferenceImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkImageAdaptorInterpolateImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipSampleTest1.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMembershipSampleTest1.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkMembershipSampleTest1.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipSampleTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipSampleTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMembershipSampleTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkMembershipSampleTest2.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipSample.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkSubsample.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipSampleTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkImageAdaptorInterpolateImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkImageAdaptorInterpolateImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkImageAdaptorInterpolateImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkCovarianceImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineDeformableTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkBSplineDeformableTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkBSplineDeformableTransformTest.cxx:29: In file included from /<>/Modules/Core/Transform/include/itkBSplineDeformableTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkBSplineDeformableTransformTest.cxx:31: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/test/itkBSplineDeformableTransformTest.cxx:138:3: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here BulkTransformType::Pointer bulkTransform = BulkTransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Core/Transform/test/itkBSplineDeformableTransformTest.cxx:31: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/test/itkBSplineDeformableTransformTest.cxx:138:3: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here BulkTransformType::Pointer bulkTransform = BulkTransformType::New(); ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkBSplineDeformableTransformTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipSampleTest3.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMembershipSampleTest3.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkMembershipSampleTest3.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipSample.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkSubsample.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipSampleTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkCovarianceImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkCovarianceImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkCovarianceImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/ImageFunction/include/itkCovarianceImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkRayCastInterpolateImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/ITKImageGridTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/ImageGrid/test/ITKImageGridTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/ImageGrid/test/ITKImageGridTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBasicArchitectureTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipSampleTest4.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMembershipSampleTest4.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkMembershipSampleTest4.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipSample.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkSubsample.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMeasurementVectorTraitsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMeasurementVectorTraitsTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMeasurementVectorTraitsTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkMeasurementVectorTraitsTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkNeighborhoodSamplerTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkRayCastInterpolateImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkRayCastInterpolateImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkRayCastInterpolateImageFunctionTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkNearestNeighborExtrapolateImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBasicArchitectureTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBasicArchitectureTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBasicArchitectureTest.cxx:20: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBinShrinkImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkImageToImageMetricv4RegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkImageToImageMetricv4RegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkImageToImageMetricv4RegistrationTest.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkMeanSquaresImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkEuclideanDistancePointSetMetricRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkNeighborhoodSamplerTest1.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkNeighborhoodSamplerTest1.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkNeighborhoodSamplerTest1.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkMixtureModelComponentBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkMixtureModelComponentBaseTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkMixtureModelComponentBaseTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkMixtureModelComponentBaseTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkMixtureModelComponentBase.h:26: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipFunctionBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkNormalVariateGeneratorTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkNearestNeighborExtrapolateImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkNearestNeighborExtrapolateImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkNearestNeighborExtrapolateImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/ImageFunction/include/itkNearestNeighborExtrapolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkExtrapolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkVectorMeanImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkNormalVariateGeneratorTest1.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkNormalVariateGeneratorTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkDistanceMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkDistanceMetricTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkDistanceMetricTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkDistanceMetricTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkDistanceMetric.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkDistanceMetricTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkDistanceMetricTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkDistanceMetricTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkDistanceMetricTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkDistanceMetric.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkDistanceToCentroidMembershipFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkVectorMeanImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkVectorMeanImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkVectorMeanImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/ImageFunction/include/itkVectorMeanImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkMahalanobisDistanceThresholdImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineDeformableTransformTest2.cxx.o -c /<>/Modules/Core/Transform/test/itkBSplineDeformableTransformTest2.cxx In file included from /<>/Modules/Core/Transform/test/itkBSplineDeformableTransformTest2.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkBSplineDeformableTransformTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBinShrinkImageFilterTest1.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBinShrinkImageFilterTest1.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBinShrinkImageFilterTest1.cxx:18: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBinShrinkImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkShrinkImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBinShrinkImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkDistanceToCentroidMembershipFunctionTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkDistanceToCentroidMembershipFunctionTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkDistanceToCentroidMembershipFunctionTest.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkDistanceToCentroidMembershipFunction.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipFunctionBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkEuclideanDistanceMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkEuclideanDistanceMetricTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkEuclideanDistanceMetricTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkEuclideanDistanceMetricTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkEuclideanDistanceMetric.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkDistanceMetric.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkEuclideanSquareDistanceMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkMahalanobisDistanceThresholdImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkMahalanobisDistanceThresholdImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkMahalanobisDistanceThresholdImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/ImageFunction/include/itkMahalanobisDistanceThresholdImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkInterpolateTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkEuclideanSquareDistanceMetricTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkEuclideanSquareDistanceMetricTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkEuclideanSquareDistanceMetricTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkEuclideanSquareDistanceMetric.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkDistanceMetric.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkListSampleTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBinShrinkImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBinShrinkImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBinShrinkImageFilterTest2.cxx:18: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBinShrinkImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkShrinkImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkInterpolateTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkInterpolateTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkInterpolateTest.cxx:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkRGBInterpolateImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkListSampleTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkListSampleTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkListSampleTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkRGBInterpolateImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkRGBInterpolateImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkRGBInterpolateImageFunctionTest.cxx:21: In file included from /<>/Modules/Core/ImageFunction/include/itkVectorLinearInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkVectorInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkWindowedSincInterpolateImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineDeformableTransformTest3.cxx.o -c /<>/Modules/Core/Transform/test/itkBSplineDeformableTransformTest3.cxx In file included from /<>/Modules/Core/Transform/test/itkBSplineDeformableTransformTest3.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkWindowedSincInterpolateImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkWindowedSincInterpolateImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkWindowedSincInterpolateImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkLinearInterpolateImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleAdaptorTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkImageToListSampleAdaptorTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkImageToListSampleAdaptorTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleAdaptorTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkDemonsImageToImageMetricv4RegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkDemonsImageToImageMetricv4RegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkDemonsImageToImageMetricv4RegistrationTest.cxx:27: In file included from /<>/Modules/Registration/Metricsv4/include/itkDemonsImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkExpectationBasedPointSetMetricRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkEuclideanDistancePointSetMetricRegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkEuclideanDistancePointSetMetricRegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkEuclideanDistancePointSetMetricRegistrationTest.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkEuclideanDistancePointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetric.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkEuclideanDistancePointSetMetricTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBSplineScatteredDataPointSetToImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBSplineScatteredDataPointSetToImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleAdaptorTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkImageToListSampleAdaptorTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkImageToListSampleAdaptorTest2.cxx:21: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkBSplineTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkBSplineTransformTest.cxx:29: In file included from /<>/Modules/Core/Transform/include/itkBSplineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkImageToListSampleFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkImageToListSampleFilterTest.cxx:23: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkLinearInterpolateImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkLinearInterpolateImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkLinearInterpolateImageFunctionTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkNeighborhoodOperatorImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBSplineScatteredDataPointSetToImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBSplineScatteredDataPointSetToImageFilterTest2.cxx:19: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkCastImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleFilterTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkImageToListSampleFilterTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkImageToListSampleFilterTest2.cxx:23: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkNeighborhoodOperatorImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkNeighborhoodOperatorImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkNeighborhoodOperatorImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/ImageFunction/include/itkNeighborhoodOperatorImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkNearestNeighborInterpolateImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleFilterTest3.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkImageToListSampleFilterTest3.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkImageToListSampleFilterTest3.cxx:23: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkJointDomainImageToListSampleAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkEuclideanDistancePointSetMetricTest2.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkEuclideanDistancePointSetMetricTest2.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkEuclideanDistancePointSetMetricTest2.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkEuclideanDistancePointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetric.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkObjectToObjectMultiMetricv4Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkNearestNeighborInterpolateImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkNearestNeighborInterpolateImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkNearestNeighborInterpolateImageFunctionTest.cxx:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkGaussianInterpolateImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkExpectationBasedPointSetMetricRegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkExpectationBasedPointSetMetricRegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkExpectationBasedPointSetMetricRegistrationTest.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkExpectationBasedPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkPointSetToPointSetMetricv4.h:21: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetric.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkObjectToObjectMultiMetricv4RegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkJointDomainImageToListSampleAdaptorTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkJointDomainImageToListSampleAdaptorTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkJointDomainImageToListSampleAdaptorTest.cxx:21: In file included from /<>/Modules/Numerics/Statistics/include/itkJointDomainImageToListSampleAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkPointSetToListSampleAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest3.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBSplineScatteredDataPointSetToImageFilterTest3.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBSplineScatteredDataPointSetToImageFilterTest3.cxx:19: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkCastImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformTest2.cxx.o -c /<>/Modules/Core/Transform/test/itkBSplineTransformTest2.cxx In file included from /<>/Modules/Core/Transform/test/itkBSplineTransformTest2.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkPointSetToListSampleAdaptorTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkPointSetToListSampleAdaptorTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkPointSetToListSampleAdaptorTest.cxx:22: In file included from /<>/Modules/Numerics/Statistics/include/itkPointSetToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkProbabilityDistributionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkGaussianInterpolateImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkGaussianInterpolateImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkGaussianInterpolateImageFunctionTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkLabelImageGaussianInterpolateImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkProbabilityDistributionTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkProbabilityDistributionTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkRandomVariateGeneratorBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkRandomVariateGeneratorBaseTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkRandomVariateGeneratorBaseTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSampleTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSampleTest.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkLabelImageGaussianInterpolateImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkLabelImageGaussianInterpolateImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkLabelImageGaussianInterpolateImageFunctionTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSampleTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSampleTest2.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleTest3.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSampleTest3.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSampleTest3.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest.cxx:20: In file included from /<>/Modules/Core/ImageFunction/include/itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkVectorInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkCentralDifferenceImageFunctionSpeedTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleTest4.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSampleTest4.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSampleTest4.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkCentralDifferenceImageFunctionSpeedTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkCentralDifferenceImageFunctionSpeedTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkCentralDifferenceImageFunctionSpeedTest.cxx:19: In file included from /<>/Modules/Core/ImageFunction/include/itkCentralDifferenceImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/ImageFunction/test/CMakeFiles/ITKImageFunctionTestDriver.dir/itkCentralDifferenceImageFunctionOnVectorSpeedTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest4.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBSplineScatteredDataPointSetToImageFilterTest4.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBSplineScatteredDataPointSetToImageFilterTest4.cxx:19: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformTest3.cxx.o -c /<>/Modules/Core/Transform/test/itkBSplineTransformTest3.cxx In file included from /<>/Modules/Core/Transform/test/itkBSplineTransformTest3.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformInitializerTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest5.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBSplineScatteredDataPointSetToImageFilterTest5.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBSplineScatteredDataPointSetToImageFilterTest5.cxx:19: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkCastImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineControlPointImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkObjectToObjectMultiMetricv4RegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkObjectToObjectMultiMetricv4RegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkObjectToObjectMultiMetricv4RegistrationTest.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkCorrelationImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4SpeedTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest3.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest3.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest3.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFunctionTestDriver.dir/itkCentralDifferenceImageFunctionOnVectorSpeedTest.cxx.o -c /<>/Modules/Core/ImageFunction/test/itkCentralDifferenceImageFunctionOnVectorSpeedTest.cxx In file included from /<>/Modules/Core/ImageFunction/test/itkCentralDifferenceImageFunctionOnVectorSpeedTest.cxx:19: In file included from /<>/Modules/Core/ImageFunction/include/itkCentralDifferenceImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Linking CXX executable ../../../../bin/ITKImageFunctionTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/ImageFunction/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageFunctionTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageFunctionTestDriver.dir/ITKImageFunctionTestDriver.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkGaussianBlurImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkVectorInterpolateImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkVarianceImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkMedianImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkBinaryThresholdImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkBSplineDecompositionImageFilterTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkBSplineInterpolateImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkBSplineResampleImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkScatterMatrixImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkMeanImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkGaussianDerivativeImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkCentralDifferenceImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkCentralDifferenceImageFunctionOnVectorTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkImageAdaptorInterpolateImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkCovarianceImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkRayCastInterpolateImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkNearestNeighborExtrapolateImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkVectorMeanImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkMahalanobisDistanceThresholdImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkInterpolateTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkRGBInterpolateImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkWindowedSincInterpolateImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkLinearInterpolateImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkNeighborhoodOperatorImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkNearestNeighborInterpolateImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkGaussianInterpolateImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkLabelImageGaussianInterpolateImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkCentralDifferenceImageFunctionSpeedTest.cxx.o CMakeFiles/ITKImageFunctionTestDriver.dir/itkCentralDifferenceImageFunctionOnVectorSpeedTest.cxx.o -o ../../../../bin/ITKImageFunctionTestDriver ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 42%] Built target ITKImageFunctionTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/AnisotropicSmoothing/test/CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/build.make Modules/Filtering/AnisotropicSmoothing/test/CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/AnisotropicSmoothing/test /<>/BUILD /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test/CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAnisotropicSmoothingTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/AnisotropicSmoothing/test/CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/build.make Modules/Filtering/AnisotropicSmoothing/test/CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Filtering/AnisotropicSmoothing/test/CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/ITKAnisotropicSmoothingTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformInitializerTest1.cxx.o -c /<>/Modules/Core/Transform/test/itkBSplineTransformInitializerTest1.cxx In file included from /<>/Modules/Core/Transform/test/itkBSplineTransformInitializerTest1.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformInitializerTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest4.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest4.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest4.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkObjectToObjectMultiMetricv4Test.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkObjectToObjectMultiMetricv4Test.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkObjectToObjectMultiMetricv4Test.cxx:19: In file included from /<>/Modules/Registration/Metricsv4/include/itkObjectToObjectMultiMetricv4.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetric.h:22: In file included from /<>/Modules/Numerics/Optimizersv4/include/itkObjectToObjectMetricBase.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Registration/Metricsv4/test/CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4VectorRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineControlPointImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBSplineControlPointImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBSplineControlPointImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBSplineControlPointImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineControlPointImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest5.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest5.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest5.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformInitializerTest2.cxx.o -c /<>/Modules/Core/Transform/test/itkBSplineTransformInitializerTest2.cxx In file included from /<>/Modules/Core/Transform/test/itkBSplineTransformInitializerTest2.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkVersorRigid3DTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4SpeedTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4SpeedTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4SpeedTest.cxx:18: In file included from /<>/Modules/Registration/Metricsv4/include/itkMeanSquaresImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkChangeInformationImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineControlPointImageFunctionTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBSplineControlPointImageFunctionTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBSplineControlPointImageFunctionTest.cxx:18: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBSplineControlPointImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 42%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkVersorTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkChangeInformationImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkChangeInformationImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkChangeInformationImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageGrid/include/itkChangeInformationImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkConstantPadImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkVersorRigid3DTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkVersorRigid3DTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkVersorRigid3DTransformTest.cxx:29: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkVersorRigid3DTransformTest.cxx:29: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/test/itkVersorRigid3DTransformTest.cxx:48:14: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here typedef TransformType::VersorType VersorType; ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Core/Transform/test/itkVersorRigid3DTransformTest.cxx:29: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/test/itkVersorRigid3DTransformTest.cxx:48:14: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here typedef TransformType::VersorType VersorType; ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkSplineKernelTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest6.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest6.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest6.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest7.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkVersorTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkVersorTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkVersorTransformTest.cxx:29: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkVersorTransformTest.cxx:29: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/test/itkVersorTransformTest.cxx:48:14: note: in instantiation of template class 'itk::VersorTransform' requested here typedef TransformType::VersorType VersorType; ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Core/Transform/test/itkVersorTransformTest.cxx:29: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/test/itkVersorTransformTest.cxx:48:14: note: in instantiation of template class 'itk::VersorTransform' requested here typedef TransformType::VersorType VersorType; ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkCompositeTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest7.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest7.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSampleToHistogramFilterTest7.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToSubsampleFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkConstantPadImageTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkConstantPadImageTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkConstantPadImageTest.cxx:20: In file included from /<>/Modules/Filtering/ImageGrid/include/itkConstantPadImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkPadImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkPadImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkCoxDeBoorBSplineKernelFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToSubsampleFilterTest1.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSampleToSubsampleFilterTest1.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSampleToSubsampleFilterTest1.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToCooccurrenceListSampleFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkCoxDeBoorBSplineKernelFunctionTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkCoxDeBoorBSplineKernelFunctionTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkCoxDeBoorBSplineKernelFunctionTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkSplineKernelTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkSplineKernelTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkSplineKernelTransformTest.cxx:25: In file included from /<>/Modules/Core/Transform/include/itkElasticBodySplineKernelTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkKernelTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkTransformCloneTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkCoxDeBoorBSplineKernelFunctionTest2.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkCoxDeBoorBSplineKernelFunctionTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkCyclicReferences.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkCompositeTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkCompositeTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkCompositeTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkMultiTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToCooccurrenceListSampleFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkScalarImageToCooccurrenceListSampleFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkScalarImageToCooccurrenceListSampleFilterTest.cxx:20: In file included from /<>/Modules/Numerics/Statistics/include/itkScalarImageToCooccurrenceListSampleFilter.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToCooccurrenceMatrixFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkCyclicReferences.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkCyclicReferences.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkCyclicReferences.cxx:20: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkCyclicShiftImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkTransformCloneTest.cxx.o -c /<>/Modules/Core/Transform/test/itkTransformCloneTest.cxx In file included from /<>/Modules/Core/Transform/test/itkTransformCloneTest.cxx:18: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Transform/test/CMakeFiles/ITKTransformTestDriver.dir/itkTestTransformGetInverse.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToCooccurrenceMatrixFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkScalarImageToCooccurrenceMatrixFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkScalarImageToCooccurrenceMatrixFilterTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToCooccurrenceMatrixFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkMultiTransformTest.cxx.o -c /<>/Modules/Core/Transform/test/itkMultiTransformTest.cxx In file included from /<>/Modules/Core/Transform/test/itkMultiTransformTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToTextureFeaturesFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkCyclicShiftImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkCyclicShiftImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkCyclicShiftImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGrid/include/itkChangeInformationImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkInterpolateImagePointsFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToCooccurrenceMatrixFilterTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkScalarImageToCooccurrenceMatrixFilterTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkScalarImageToCooccurrenceMatrixFilterTest2.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToRunLengthMatrixFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/ITKAnisotropicSmoothingTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test/ITKAnisotropicSmoothingTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test/ITKAnisotropicSmoothingTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/AnisotropicSmoothing/test/CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkGradientAnisotropicDiffusionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToTextureFeaturesFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkScalarImageToTextureFeaturesFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkScalarImageToTextureFeaturesFilterTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToRunLengthFeaturesFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkInterpolateImagePointsFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkInterpolateImagePointsFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkInterpolateImagePointsFilterTest.cxx:31: In file included from /<>/Modules/Filtering/ImageGrid/include/itkInterpolateImagePointsFilter.h:31: In file included from /<>/Modules/Core/ImageFunction/include/itkBSplineInterpolateImageFunction.h:33: In file included from /<>/Modules/Core/ImageFunction/include/itkInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkCropImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToRunLengthMatrixFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkScalarImageToRunLengthMatrixFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkScalarImageToRunLengthMatrixFilterTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSparseFrequencyContainer2Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSparseFrequencyContainer2Test.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSparseFrequencyContainer2Test.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSparseFrequencyContainer2Test.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkSparseFrequencyContainer2.h:25: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSpatialNeighborSubsamplerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4VectorRegistrationTest.cxx.o -c /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4VectorRegistrationTest.cxx In file included from /<>/Modules/Registration/Metricsv4/test/itkMeanSquaresImageToImageMetricv4VectorRegistrationTest.cxx:28: In file included from /<>/Modules/Registration/Metricsv4/include/itkMeanSquaresImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Linking CXX executable ../../../../bin/ITKMetricsv4TestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkGradientAnisotropicDiffusionImageFilterTest.cxx.o -c /<>/Modules/Filtering/AnisotropicSmoothing/test/itkGradientAnisotropicDiffusionImageFilterTest.cxx In file included from /<>/Modules/Filtering/AnisotropicSmoothing/test/itkGradientAnisotropicDiffusionImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkGradientAnisotropicDiffusionImageFilter.h:21: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkAnisotropicDiffusionImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/AnisotropicSmoothing/test/CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkCurvatureAnisotropicDiffusionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToRunLengthFeaturesFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkScalarImageToRunLengthFeaturesFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkScalarImageToRunLengthFeaturesFilterTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkStandardDeviationPerComponentSampleFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkCropImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkCropImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkCropImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageGrid/include/itkCropImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkExtractImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkCropImageFilter3DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformTestDriver.dir/itkTestTransformGetInverse.cxx.o -c /<>/Modules/Core/Transform/test/itkTestTransformGetInverse.cxx In file included from /<>/Modules/Core/Transform/test/itkTestTransformGetInverse.cxx:18: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Core/Transform/test/itkTestTransformGetInverse.cxx:24: In file included from /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:38:10: note: in instantiation of template class 'itk::Euler3DTransform' requested here public Euler3DTransform ^ /<>/Modules/Core/Transform/test/itkTestTransformGetInverse.cxx:61:12: note: in instantiation of template class 'itk::CenteredEuler3DTransform' requested here typename TTransform::Pointer m_Transform; ^ /<>/Modules/Core/Transform/test/itkTestTransformGetInverse.cxx:86:26: note: in instantiation of template class 'ThreadData >' requested here ThreadData td; ^ /<>/Modules/Core/Transform/test/itkTestTransformGetInverse.cxx:115:17: note: in instantiation of function template specialization 'TransformTest >' requested here errorCount += TransformTest< itk::CenteredEuler3DTransform >(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Core/Transform/test/itkTestTransformGetInverse.cxx:43: In file included from /<>/Modules/Core/Transform/include/itkScaleSkewVersor3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/include/itkSimilarity3DTransform.h:48:10: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here public VersorRigid3DTransform ^ /<>/Modules/Core/Transform/test/itkTestTransformGetInverse.cxx:61:12: note: in instantiation of template class 'itk::Similarity3DTransform' requested here typename TTransform::Pointer m_Transform; ^ /<>/Modules/Core/Transform/test/itkTestTransformGetInverse.cxx:86:26: note: in instantiation of template class 'ThreadData >' requested here ThreadData td; ^ /<>/Modules/Core/Transform/test/itkTestTransformGetInverse.cxx:140:17: note: in instantiation of function template specialization 'TransformTest >' requested here errorCount += TransformTest< itk::Similarity3DTransform >(); ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Linking CXX executable ../../../../bin/ITKTransformTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Transform/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKTransformTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKTransformTestDriver.dir/ITKTransformTestDriver.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkFixedCenterOfRotationAffineTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkAffineTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkScaleSkewVersor3DTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkEuler3DTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkCenteredRigid2DTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkEuler2DTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkRigid3DTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkScaleVersor3DTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkRigid3DPerspectiveTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkSimilarity2DTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkTranslationTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkIdentityTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkv3Rigid3DTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkCenteredAffineTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkRigid2DTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkScaleLogarithmicTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkQuaternionRigidTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkScaleTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkSimilarity3DTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkAzimuthElevationToCartesianTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkCenteredEuler3DTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkTransformsSetParametersTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineDeformableTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineDeformableTransformTest2.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineDeformableTransformTest3.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformTest2.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformTest3.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformInitializerTest1.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkBSplineTransformInitializerTest2.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkVersorRigid3DTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkVersorTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkSplineKernelTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkCompositeTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkTransformCloneTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkMultiTransformTest.cxx.o CMakeFiles/ITKTransformTestDriver.dir/itkTestTransformGetInverse.cxx.o -o ../../../../bin/ITKTransformTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 43%] Built target ITKTransformTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/build.make Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Metricsv4/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMetricsv4TestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKMetricsv4TestDriver.dir/ITKMetricsv4TestDriver.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkEuclideanDistancePointSetMetricTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkExpectationBasedPointSetMetricTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkJensenHavrdaCharvatTsallisPointSetMetricTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkJensenHavrdaCharvatTsallisPointSetMetricRegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkLabeledPointSetMetricTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkLabeledPointSetMetricRegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkImageToImageMetricv4Test.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkJointHistogramMutualInformationImageToImageMetricv4Test.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkJointHistogramMutualInformationImageToImageRegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4Test.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkCorrelationImageToImageMetricv4Test.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4OnVectorTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4OnVectorTest2.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkANTSNeighborhoodCorrelationImageToImageMetricv4Test.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkANTSNeighborhoodCorrelationImageToImageRegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMattesMutualInformationImageToImageMetricv4Test.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMattesMutualInformationImageToImageMetricv4RegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMultiStartImageToImageMetricv4RegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMultiGradientImageToImageMetricv4RegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMetricImageGradientTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4RegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4RegistrationTest2.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkImageToImageMetricv4RegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkDemonsImageToImageMetricv4Test.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkDemonsImageToImageMetricv4RegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkEuclideanDistancePointSetMetricRegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkExpectationBasedPointSetMetricRegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkEuclideanDistancePointSetMetricTest2.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkObjectToObjectMultiMetricv4Test.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkObjectToObjectMultiMetricv4RegistrationTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4SpeedTest.cxx.o CMakeFiles/ITKMetricsv4TestDriver.dir/itkMeanSquaresImageToImageMetricv4VectorRegistrationTest.cxx.o -o ../../../../bin/ITKMetricsv4TestDriver ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizersv4-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 43%] Built target ITKMetricsv4TestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/BMP/test/CMakeFiles/ITKIOBMPTestDriver.dir/build.make Modules/IO/BMP/test/CMakeFiles/ITKIOBMPTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BMP/test /<>/BUILD /<>/BUILD/Modules/IO/BMP/test /<>/BUILD/Modules/IO/BMP/test/CMakeFiles/ITKIOBMPTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBMPTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/BMP/test/CMakeFiles/ITKIOBMPTestDriver.dir/build.make Modules/IO/BMP/test/CMakeFiles/ITKIOBMPTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/BMP/test/CMakeFiles/ITKIOBMPTestDriver.dir/ITKIOBMPTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/ImageBase/test /<>/BUILD /<>/BUILD/Modules/IO/ImageBase/test /<>/BUILD/Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOImageBaseTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/build.make Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/ITKIOImageBaseTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSpatialNeighborSubsamplerTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSpatialNeighborSubsamplerTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSpatialNeighborSubsamplerTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkSpatialNeighborSubsampler.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkRegionConstrainedSubsampler.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkSubsamplerBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkStatisticsTypesTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkStandardDeviationPerComponentSampleFilterTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkStandardDeviationPerComponentSampleFilterTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkStandardDeviationPerComponentSampleFilterTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSubsampleTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkCropImageFilter3DTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkCropImageFilter3DTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkCropImageFilter3DTest.cxx:20: In file included from /<>/Modules/Filtering/ImageGrid/include/itkCropImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkExtractImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkFlipImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkStatisticsTypesTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkStatisticsTypesTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkStatisticsTypesTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSubsampleTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkCurvatureAnisotropicDiffusionImageFilterTest.cxx.o -c /<>/Modules/Filtering/AnisotropicSmoothing/test/itkCurvatureAnisotropicDiffusionImageFilterTest.cxx In file included from /<>/Modules/Filtering/AnisotropicSmoothing/test/itkCurvatureAnisotropicDiffusionImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkCurvatureAnisotropicDiffusionImageFilter.h:21: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkAnisotropicDiffusionImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/AnisotropicSmoothing/test/CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkMinMaxCurvatureFlowImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSubsampleTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSubsampleTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSubsampleTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkSubsampleTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkFlipImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkFlipImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkFlipImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGrid/include/itkFlipImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkExpandImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSubsampleTest3.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSubsampleTest3.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSubsampleTest3.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkMeanSampleFilter.h:119: In file included from /<>/Modules/Numerics/Statistics/include/itkMeanSampleFilter.hxx:25: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkTDistributionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkSubsampleTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkSubsampleTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkSubsampleTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkStatisticsAlgorithmTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkTDistributionTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkTDistributionTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkStatisticsAlgorithmTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkStatisticsAlgorithmTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkStatisticsAlgorithmTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkStatisticsAlgorithmTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkUniformRandomSpatialNeighborSubsamplerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkExpandImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkExpandImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkExpandImageFilterTest.cxx:21: In file included from /<>/Modules/Core/ImageFunction/include/itkNearestNeighborInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkInterpolateImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkRegionOfInterestImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkStatisticsAlgorithmTest2.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkStatisticsAlgorithmTest2.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkStatisticsAlgorithmTest2.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Numerics/Statistics/test/CMakeFiles/ITKStatisticsTestDriver.dir/itkVectorContainerToListSampleAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkVectorContainerToListSampleAdaptorTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkVectorContainerToListSampleAdaptorTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkVectorContainerToListSampleAdaptorTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkVectorContainerToListSampleAdaptor.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/ITKCommon1TestDriver.cxx.o -c /<>/BUILD/Modules/Core/Common/test/ITKCommon1TestDriver.cxx In file included from /<>/BUILD/Modules/Core/Common/test/ITKCommon1TestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageRegionExplicitTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkAbortProcessObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkRegionOfInterestImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkRegionOfInterestImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkRegionOfInterestImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageGrid/include/itkRegionOfInterestImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineUpsampleImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRegionExplicitTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageRegionExplicitTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageRegionExplicitTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkCommandObserverObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkMinMaxCurvatureFlowImageFilterTest.cxx.o -c /<>/Modules/Filtering/AnisotropicSmoothing/test/itkMinMaxCurvatureFlowImageFilterTest.cxx In file included from /<>/Modules/Filtering/AnisotropicSmoothing/test/itkMinMaxCurvatureFlowImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/CurvatureFlow/include/itkMinMaxCurvatureFlowImageFilter.h:21: In file included from /<>/Modules/Filtering/CurvatureFlow/include/itkCurvatureFlowImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/AnisotropicSmoothing/test/CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkVectorAnisotropicDiffusionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkCommandObserverObjectTest.cxx.o -c /<>/Modules/Core/Common/test/itkCommandObserverObjectTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkAdaptorComparisonTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKStatisticsTestDriver.dir/itkUniformRandomSpatialNeighborSubsamplerTest.cxx.o -c /<>/Modules/Numerics/Statistics/test/itkUniformRandomSpatialNeighborSubsamplerTest.cxx In file included from /<>/Modules/Numerics/Statistics/test/itkUniformRandomSpatialNeighborSubsamplerTest.cxx:23: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToNeighborhoodSampleAdaptor.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Linking CXX executable ../../../../bin/ITKStatisticsTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Statistics/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKStatisticsTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKStatisticsTestDriver.dir/ITKStatisticsTestDriver.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkDecisionRuleTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkDenseFrequencyContainer2Test.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkExpectationMaximizationMixtureModelEstimatorTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkGaussianDistributionTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkGaussianMembershipFunctionTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkGaussianMixtureModelComponentTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkGaussianRandomSpatialNeighborSubsamplerTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkKalmanLinearEstimatorTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeBasedKmeansEstimatorTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeGeneratorTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeTest1.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeTest3.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkKdTreeTestSamplePoints.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMaximumDecisionRuleTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMinimumDecisionRuleTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMaximumRatioDecisionRuleTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMeanSampleFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMeanSampleFilterTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMeanSampleFilterTest3.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkHistogramTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkHistogramToTextureFeaturesFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkHistogramToTextureFeaturesFilterNaNTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkChiSquareDistributionTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkCovarianceSampleFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkCovarianceSampleFilterTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkCovarianceSampleFilterTest3.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCovarianceSampleFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCovarianceSampleFilterTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedMeanSampleFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCentroidKdTreeGeneratorTest1.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCentroidKdTreeGeneratorTest8.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkWeightedCentroidKdTreeGeneratorTest9.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMahalanobisDistanceMetricTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkManhattanDistanceMetricTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipFunctionBaseTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipFunctionBaseTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipSampleTest1.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipSampleTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipSampleTest3.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMembershipSampleTest4.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMeasurementVectorTraitsTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkNeighborhoodSamplerTest1.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkMixtureModelComponentBaseTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkNormalVariateGeneratorTest1.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkDistanceMetricTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkDistanceMetricTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkDistanceToCentroidMembershipFunctionTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkEuclideanDistanceMetricTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkEuclideanSquareDistanceMetricTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkListSampleTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleAdaptorTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleAdaptorTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleFilterTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkImageToListSampleFilterTest3.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkJointDomainImageToListSampleAdaptorTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkPointSetToListSampleAdaptorTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkProbabilityDistributionTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkRandomVariateGeneratorBaseTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleTest3.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleTest4.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest3.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest4.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest5.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest6.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToHistogramFilterTest7.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSampleToSubsampleFilterTest1.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToCooccurrenceListSampleFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToCooccurrenceMatrixFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToCooccurrenceMatrixFilterTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToTextureFeaturesFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToRunLengthMatrixFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkScalarImageToRunLengthFeaturesFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSparseFrequencyContainer2Test.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSpatialNeighborSubsamplerTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkStandardDeviationPerComponentSampleFilterTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkStatisticsTypesTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSubsampleTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSubsampleTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkSubsampleTest3.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkTDistributionTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkStatisticsAlgorithmTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkStatisticsAlgorithmTest2.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkUniformRandomSpatialNeighborSubsamplerTest.cxx.o CMakeFiles/ITKStatisticsTestDriver.dir/itkVectorContainerToListSampleAdaptorTest.cxx.o -o ../../../../bin/ITKStatisticsTestDriver ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 43%] Built target ITKStatisticsTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/build.make Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkAbortProcessObjectTest.cxx.o -c /<>/Modules/Core/Common/test/itkAbortProcessObjectTest.cxx In file included from /<>/Modules/Core/Common/test/itkAbortProcessObjectTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkExtractImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkCovariantVectorGeometryTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GDCM/test /<>/BUILD /<>/BUILD/Modules/IO/GDCM/test /<>/BUILD/Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGDCMTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/build.make Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/ITKIOGDCMTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkCovariantVectorGeometryTest.cxx.o -c /<>/Modules/Core/Common/test/itkCovariantVectorGeometryTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkDataTypeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkAdaptorComparisonTest.cxx.o -c /<>/Modules/Core/Common/test/itkAdaptorComparisonTest.cxx In file included from /<>/Modules/Core/Common/test/itkAdaptorComparisonTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkDecoratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkDataTypeTest.cxx.o -c /<>/Modules/Core/Common/test/itkDataTypeTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkExtractImage3Dto2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineUpsampleImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBSplineUpsampleImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBSplineUpsampleImageFilterTest.cxx:31: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBSplineUpsampleImageFilter.h:32: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBSplineL2ResampleImageFilterBase.h:32: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBSplineResampleImageFilterBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageLinearIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageLinearConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineResampleImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkVectorAnisotropicDiffusionImageFilterTest.cxx.o -c /<>/Modules/Filtering/AnisotropicSmoothing/test/itkVectorAnisotropicDiffusionImageFilterTest.cxx In file included from /<>/Modules/Filtering/AnisotropicSmoothing/test/itkVectorAnisotropicDiffusionImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkVectorGradientAnisotropicDiffusionImageFilter.h:22: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkAnisotropicDiffusionImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/AnisotropicSmoothing/test/CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkGradientAnisotropicDiffusionImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkDecoratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkDecoratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkDecoratorTest.cxx:20: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkExtractImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkExtractImage3Dto2DTest.cxx.o -c /<>/Modules/Core/Common/test/itkExtractImage3Dto2DTest.cxx In file included from /<>/Modules/Core/Common/test/itkExtractImage3Dto2DTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkExtractImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkFilterDispatchTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineResampleImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBSplineResampleImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBSplineResampleImageFilterTest.cxx:31: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBSplineDownsampleImageFilter.h:32: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBSplineL2ResampleImageFilterBase.h:32: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBSplineResampleImageFilterBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageLinearIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageLinearConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineDownsampleImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkFilterDispatchTest.cxx.o -c /<>/Modules/Core/Common/test/itkFilterDispatchTest.cxx In file included from /<>/Modules/Core/Common/test/itkFilterDispatchTest.cxx:41: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkFloodFilledSpatialFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkExtractImageTest.cxx.o -c /<>/Modules/Core/Common/test/itkExtractImageTest.cxx In file included from /<>/Modules/Core/Common/test/itkExtractImageTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkExtractImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkFloodFillIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkGradientAnisotropicDiffusionImageFilterTest2.cxx.o -c /<>/Modules/Filtering/AnisotropicSmoothing/test/itkGradientAnisotropicDiffusionImageFilterTest2.cxx In file included from /<>/Modules/Filtering/AnisotropicSmoothing/test/itkGradientAnisotropicDiffusionImageFilterTest2.cxx:20: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkCastImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Linking CXX executable ../../../../bin/ITKAnisotropicSmoothingTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/ITKAnisotropicSmoothingTestDriver.cxx.o CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkGradientAnisotropicDiffusionImageFilterTest.cxx.o CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkCurvatureAnisotropicDiffusionImageFilterTest.cxx.o CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkMinMaxCurvatureFlowImageFilterTest.cxx.o CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkVectorAnisotropicDiffusionImageFilterTest.cxx.o CMakeFiles/ITKAnisotropicSmoothingTestDriver.dir/itkGradientAnisotropicDiffusionImageFilterTest2.cxx.o -o ../../../../bin/ITKAnisotropicSmoothingTestDriver ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 43%] Built target ITKAnisotropicSmoothingTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/GDCM/CMakeFiles/ITKIOGDCMHeaderTest1.dir/build.make Modules/IO/GDCM/CMakeFiles/ITKIOGDCMHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkFloodFilledSpatialFunctionTest.cxx.o -c /<>/Modules/Core/Common/test/itkFloodFilledSpatialFunctionTest.cxx In file included from /<>/Modules/Core/Common/test/itkFloodFilledSpatialFunctionTest.cxx:25: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Generating test/ITKIOGDCMHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkGaussianDerivativeOperatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOGDCM /<>/Modules/IO/GDCM /<>/BUILD/Modules/IO/GDCM 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GDCM /<>/BUILD /<>/BUILD/Modules/IO/GDCM /<>/BUILD/Modules/IO/GDCM/CMakeFiles/ITKIOGDCMHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGDCMHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GDCM/CMakeFiles/ITKIOGDCMHeaderTest1.dir/build.make Modules/IO/GDCM/CMakeFiles/ITKIOGDCMHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/GDCM/CMakeFiles/ITKIOGDCMHeaderTest1.dir/test/ITKIOGDCMHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkFloodFillIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkFloodFillIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkFloodFillIteratorTest.cxx:22: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkMapContainerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/usr/include/double-conversion -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOBMPTestDriver.dir/ITKIOBMPTestDriver.cxx.o -c /<>/BUILD/Modules/IO/BMP/test/ITKIOBMPTestDriver.cxx In file included from /<>/BUILD/Modules/IO/BMP/test/ITKIOBMPTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/BMP/test/CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/GDCM/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMHeaderTest1.dir/test/ITKIOGDCMHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/GDCM/test/ITKIOGDCMHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/GDCM/test/ITKIOGDCMHeaderTest1.cxx:23: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Linking CXX executable ../../../bin/ITKIOGDCMHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/ITKIOImageBaseTestDriver.cxx.o -c /<>/BUILD/Modules/IO/ImageBase/test/ITKIOImageBaseTestDriver.cxx In file included from /<>/BUILD/Modules/IO/ImageBase/test/ITKIOImageBaseTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkConvertBufferTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOGDCMHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOGDCMHeaderTest1.dir/test/ITKIOGDCMHeaderTest1.cxx.o -o ../../../bin/ITKIOGDCMHeaderTest1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 43%] Built target ITKIOGDCMHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/GIPL/test/CMakeFiles/ITKIOGIPLTestDriver.dir/build.make Modules/IO/GIPL/test/CMakeFiles/ITKIOGIPLTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkMapContainerTest.cxx.o -c /<>/Modules/Core/Common/test/itkMapContainerTest.cxx In file included from /<>/Modules/Core/Common/test/itkMapContainerTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GIPL/test /<>/BUILD /<>/BUILD/Modules/IO/GIPL/test /<>/BUILD/Modules/IO/GIPL/test/CMakeFiles/ITKIOGIPLTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGIPLTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GIPL/test/CMakeFiles/ITKIOGIPLTestDriver.dir/build.make Modules/IO/GIPL/test/CMakeFiles/ITKIOGIPLTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkIteratorTests.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/GIPL/test/CMakeFiles/ITKIOGIPLTestDriver.dir/ITKIOGIPLTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkGaussianDerivativeOperatorTest.cxx.o -c /<>/Modules/Core/Common/test/itkGaussianDerivativeOperatorTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageReverseIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineDownsampleImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkBSplineDownsampleImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkBSplineDownsampleImageFilterTest.cxx:31: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBSplineDownsampleImageFilter.h:32: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBSplineL2ResampleImageFilterBase.h:32: In file included from /<>/Modules/Filtering/ImageGrid/include/itkBSplineResampleImageFilterBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageLinearIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageLinearConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkTileImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkConvertBufferTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkConvertBufferTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkConvertBufferTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkConvertBufferTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkIteratorTests.cxx.o -c /<>/Modules/Core/Common/test/itkIteratorTests.cxx In file included from /<>/Modules/Core/Common/test/itkIteratorTests.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageComputeOffsetAndIndexTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageReverseIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageReverseIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageReverseIteratorTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionReverseIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionReverseConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageReverseConstIterator.h:22: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageDuplicatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkConvertBufferTest2.cxx.o -c /<>/Modules/IO/ImageBase/test/itkConvertBufferTest2.cxx In file included from /<>/Modules/IO/ImageBase/test/itkConvertBufferTest2.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/usr/include/double-conversion -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest2.cxx.o -c /<>/Modules/IO/BMP/test/itkBMPImageIOTest2.cxx In file included from /<>/Modules/IO/BMP/test/itkBMPImageIOTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/BMP/test/CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageComputeOffsetAndIndexTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageComputeOffsetAndIndexTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageComputeOffsetAndIndexTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageIteratorsForwardBackwardTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageDuplicatorTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageDuplicatorTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageDuplicatorTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageDuplicator.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageLinearIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderTest1.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileReaderTest1.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileReaderTest1.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkTileImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkTileImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkTileImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGrid/include/itkTileImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkInterpolateImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageIteratorsForwardBackwardTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageIteratorsForwardBackwardTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageIteratorsForwardBackwardTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageAdaptorPipeLineTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageLinearIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageLinearIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageLinearIteratorTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageLinearIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageLinearConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImportContainerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/usr/include/double-conversion -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest.cxx.o -c /<>/Modules/IO/BMP/test/itkBMPImageIOTest.cxx In file included from /<>/Modules/IO/BMP/test/itkBMPImageIOTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/BMP/test/CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileWriterTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileWriterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkIOCommonTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImportContainerTest.cxx.o -c /<>/Modules/Core/Common/test/itkImportContainerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImportImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkIOCommonTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkIOCommonTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkIOCommonTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkInterpolateImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkInterpolateImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkInterpolateImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkInterpolateImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkPasteImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageAdaptorPipeLineTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageAdaptorPipeLineTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageAdaptorPipeLineTest.cxx:28: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageRandomIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkIOCommonTest2.cxx.o -c /<>/Modules/IO/ImageBase/test/itkIOCommonTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkNumericSeriesFileNamesTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkNumericSeriesFileNamesTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkNumericSeriesFileNamesTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkRegularExpressionSeriesFileNamesTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImportImageTest.cxx.o -c /<>/Modules/Core/Common/test/itkImportImageTest.cxx In file included from /<>/Modules/Core/Common/test/itkImportImageTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageRandomIteratorTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/usr/include/double-conversion -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest3.cxx.o -c /<>/Modules/IO/BMP/test/itkBMPImageIOTest3.cxx In file included from /<>/Modules/IO/BMP/test/itkBMPImageIOTest3.cxx:18: In file included from /<>/Modules/IO/BMP/include/itkBMPImageIO.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/BMP/test/CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkRegularExpressionSeriesFileNamesTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkRegularExpressionSeriesFileNamesTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkArchetypeSeriesFileNamesTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRandomIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageRandomIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageRandomIteratorTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageRandomNonRepeatingIteratorWithIndexTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkArchetypeSeriesFileNamesTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkArchetypeSeriesFileNamesTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkLargeImageWriteConvertReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GDCM/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMTestDriver.dir/ITKIOGDCMTestDriver.cxx.o -c /<>/BUILD/Modules/IO/GDCM/test/ITKIOGDCMTestDriver.cxx In file included from /<>/BUILD/Modules/IO/GDCM/test/ITKIOGDCMTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkPasteImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkPasteImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkPasteImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageGrid/include/itkPasteImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkVectorResampleImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRandomNonRepeatingIteratorWithIndexTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageRandomNonRepeatingIteratorWithIndexTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageRandomNonRepeatingIteratorWithIndexTest.cxx:27: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageRandomNonRepeatingIteratorWithIndexTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/usr/include/double-conversion -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest4.cxx.o -c /<>/Modules/IO/BMP/test/itkBMPImageIOTest4.cxx In file included from /<>/Modules/IO/BMP/test/itkBMPImageIOTest4.cxx:18: In file included from /<>/Modules/IO/BMP/include/itkBMPImageIO.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/IO/BMP/test/CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRandomNonRepeatingIteratorWithIndexTest2.cxx.o -c /<>/Modules/Core/Common/test/itkImageRandomNonRepeatingIteratorWithIndexTest2.cxx In file included from /<>/Modules/Core/Common/test/itkImageRandomNonRepeatingIteratorWithIndexTest2.cxx:27: In file included from /<>/Modules/Core/Common/include/itkImageRandomNonRepeatingConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 43%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageSliceIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRandomIteratorTest2.cxx.o -c /<>/Modules/Core/Common/test/itkImageRandomIteratorTest2.cxx In file included from /<>/Modules/Core/Common/test/itkImageRandomIteratorTest2.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageRandomIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRandomConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkTreeContainerTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkLargeImageWriteConvertReadTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkLargeImageWriteConvertReadTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkLargeImageWriteConvertReadTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkLargeImageWriteReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageSliceIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageSliceIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageSliceIteratorTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageSliceIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageSliceConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkRGBPixelTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/usr/include/double-conversion -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest5.cxx.o -c /<>/Modules/IO/BMP/test/itkBMPImageIOTest5.cxx In file included from /<>/Modules/IO/BMP/test/itkBMPImageIOTest5.cxx:18: In file included from /<>/Modules/IO/BMP/include/itkBMPImageIO.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/BMP/test/CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTestPalette.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkTreeContainerTest2.cxx.o -c /<>/Modules/Core/Common/test/itkTreeContainerTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkLightObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkVectorResampleImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkVectorResampleImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkVectorResampleImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGrid/include/itkVectorResampleImageFilter.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkPermuteAxesImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkRGBPixelTest.cxx.o -c /<>/Modules/Core/Common/test/itkRGBPixelTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkBoundingBoxTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkLightObjectTest.cxx.o -c /<>/Modules/Core/Common/test/itkLightObjectTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkBoundaryConditionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GDCM/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageIOTest.cxx.o -c /<>/Modules/IO/GDCM/test/itkGDCMImageIOTest.cxx In file included from /<>/Modules/IO/GDCM/test/itkGDCMImageIOTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageIOTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkBoundingBoxTest.cxx.o -c /<>/Modules/Core/Common/test/itkBoundingBoxTest.cxx In file included from /<>/Modules/Core/Common/test/itkBoundingBoxTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkBoundingBox.h:31: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageIONoCrashTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkPermuteAxesImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkPermuteAxesImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkPermuteAxesImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGrid/include/itkPermuteAxesImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImage2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkBoundaryConditionTest.cxx.o -c /<>/Modules/Core/Common/test/itkBoundaryConditionTest.cxx In file included from /<>/Modules/Core/Common/test/itkBoundaryConditionTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkByteSwapTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/usr/include/double-conversion -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTestPalette.cxx.o -c /<>/Modules/IO/BMP/test/itkBMPImageIOTestPalette.cxx In file included from /<>/Modules/IO/BMP/test/itkBMPImageIOTestPalette.cxx:19: In file included from /<>/Modules/IO/BMP/include/itkBMPImageIO.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/ITKIOBMPTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BMP/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOBMPTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOBMPTestDriver.dir/ITKIOBMPTestDriver.cxx.o CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest2.cxx.o CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest.cxx.o CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest3.cxx.o CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest4.cxx.o CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTest5.cxx.o CMakeFiles/ITKIOBMPTestDriver.dir/itkBMPImageIOTestPalette.cxx.o -o ../../../../bin/ITKIOBMPTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKIOBMPTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/JPEG/test/CMakeFiles/ITKIOJPEGTestDriver.dir/build.make Modules/IO/JPEG/test/CMakeFiles/ITKIOJPEGTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/JPEG/test /<>/BUILD /<>/BUILD/Modules/IO/JPEG/test /<>/BUILD/Modules/IO/JPEG/test/CMakeFiles/ITKIOJPEGTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOJPEGTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/JPEG/test/CMakeFiles/ITKIOJPEGTestDriver.dir/build.make Modules/IO/JPEG/test/CMakeFiles/ITKIOJPEGTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/JPEG/test/CMakeFiles/ITKIOJPEGTestDriver.dir/ITKIOJPEGTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkByteSwapTest.cxx.o -c /<>/Modules/Core/Common/test/itkByteSwapTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkSparseImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkLargeImageWriteReadTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkLargeImageWriteReadTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkLargeImageWriteReadTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderDimensionsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GDCM/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageIONoCrashTest.cxx.o -c /<>/Modules/IO/GDCM/test/itkGDCMImageIONoCrashTest.cxx In file included from /<>/Modules/IO/GDCM/test/itkGDCMImageIONoCrashTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageReadSeriesWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GDCM/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageIOTest2.cxx.o -c /<>/Modules/IO/GDCM/test/itkGDCMImageIOTest2.cxx In file included from /<>/Modules/IO/GDCM/test/itkGDCMImageIOTest2.cxx:18: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIO.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMSeriesReadImageWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GIPL/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GIPL/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGIPLTestDriver.dir/ITKIOGIPLTestDriver.cxx.o -c /<>/BUILD/Modules/IO/GIPL/test/ITKIOGIPLTestDriver.cxx In file included from /<>/BUILD/Modules/IO/GIPL/test/ITKIOGIPLTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/GIPL/test/CMakeFiles/ITKIOGIPLTestDriver.dir/itkGiplImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImage2DTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkOrientedImage2DTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkOrientedImage2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImage3DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkSparseImageTest.cxx.o -c /<>/Modules/Core/Common/test/itkSparseImageTest.cxx In file included from /<>/Modules/Core/Common/test/itkSparseImageTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkSparseImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkSimpleFilterWatcherTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkSimpleFilterWatcherTest.cxx.o -c /<>/Modules/Core/Common/test/itkSimpleFilterWatcherTest.cxx In file included from /<>/Modules/Core/Common/test/itkSimpleFilterWatcherTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkSymmetricEllipsoidInteriorExteriorSpatialFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkSymmetricEllipsoidInteriorExteriorSpatialFunctionTest.cxx.o -c /<>/Modules/Core/Common/test/itkSymmetricEllipsoidInteriorExteriorSpatialFunctionTest.cxx In file included from /<>/Modules/Core/Common/test/itkSymmetricEllipsoidInteriorExteriorSpatialFunctionTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkSymmetricEllipsoidInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkSymmetricSecondRankTensorImageReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GIPL/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GIPL/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGIPLTestDriver.dir/itkGiplImageIOTest.cxx.o -c /<>/Modules/IO/GIPL/test/itkGiplImageIOTest.cxx In file included from /<>/Modules/IO/GIPL/test/itkGiplImageIOTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/ITKIOGIPLTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImage3DTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkOrientedImage3DTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkOrientedImage3DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImageAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GIPL/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOGIPLTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOGIPLTestDriver.dir/ITKIOGIPLTestDriver.cxx.o CMakeFiles/ITKIOGIPLTestDriver.dir/itkGiplImageIOTest.cxx.o -o ../../../../bin/ITKIOGIPLTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKIOGIPLTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/build.make Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Meta/test /<>/BUILD /<>/BUILD/Modules/IO/Meta/test /<>/BUILD/Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMetaTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/build.make Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/ITKIOMetaTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImageAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkOrientedImageAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkOrientedImageAdaptorTest.cxx:33: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImageProfileTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GDCM/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageReadSeriesWriteTest.cxx.o -c /<>/Modules/IO/GDCM/test/itkGDCMImageReadSeriesWriteTest.cxx In file included from /<>/Modules/IO/GDCM/test/itkGDCMImageReadSeriesWriteTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMSeriesMissingDicomTagTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GDCM/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMSeriesReadImageWriteTest.cxx.o -c /<>/Modules/IO/GDCM/test/itkGDCMSeriesReadImageWriteTest.cxx In file included from /<>/Modules/IO/GDCM/test/itkGDCMSeriesReadImageWriteTest.cxx:27: In file included from /<>/Modules/IO/ImageBase/include/itkImageSeriesReader.h:26: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMSeriesStreamReadImageWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderDimensionsTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileReaderDimensionsTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileReaderDimensionsTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderPositiveSpacingTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImageProfileTest1.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkOrientedImageProfileTest1.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkOrientedImageProfileTest1.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImageProfileTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkSymmetricSecondRankTensorImageReadTest.cxx.o -c /<>/Modules/Core/Common/test/itkSymmetricSecondRankTensorImageReadTest.cxx In file included from /<>/Modules/Core/Common/test/itkSymmetricSecondRankTensorImageReadTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkSymmetricSecondRankTensorImageWriteReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImageProfileTest2.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkOrientedImageProfileTest2.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkOrientedImageProfileTest2.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImageProfileTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GDCM/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMSeriesMissingDicomTagTest.cxx.o -c /<>/Modules/IO/GDCM/test/itkGDCMSeriesMissingDicomTagTest.cxx In file included from /<>/Modules/IO/GDCM/test/itkGDCMSeriesMissingDicomTagTest.cxx:27: In file included from /<>/Modules/IO/ImageBase/include/itkImageSeriesReader.h:26: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImagePositionPatientTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderPositiveSpacingTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileReaderPositiveSpacingTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileReaderPositiveSpacingTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderStreamingTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImageProfileTest3.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkOrientedImageProfileTest3.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkOrientedImageProfileTest3.cxx:19: In file included from /<>/Modules/Core/Common/include/itkVectorImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkOrientImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkSymmetricSecondRankTensorImageWriteReadTest.cxx.o -c /<>/Modules/Core/Common/test/itkSymmetricSecondRankTensorImageWriteReadTest.cxx In file included from /<>/Modules/Core/Common/test/itkSymmetricSecondRankTensorImageWriteReadTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkArray2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkArray2DTest.cxx.o -c /<>/Modules/Core/Common/test/itkArray2DTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkFloatingPointExceptionsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GDCM/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMSeriesStreamReadImageWriteTest.cxx.o -c /<>/Modules/IO/GDCM/test/itkGDCMSeriesStreamReadImageWriteTest.cxx In file included from /<>/Modules/IO/GDCM/test/itkGDCMSeriesStreamReadImageWriteTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageSeriesReader.h:26: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageIOOrthoDirTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkFloatingPointExceptionsTest.cxx.o -c /<>/Modules/Core/Common/test/itkFloatingPointExceptionsTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkFixedArrayTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkFixedArrayTest2.cxx.o -c /<>/Modules/Core/Common/test/itkFixedArrayTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkNeighborhoodAlgorithmTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderStreamingTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileReaderStreamingTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileReaderStreamingTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderStreamingTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GDCM/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImagePositionPatientTest.cxx.o -c /<>/Modules/IO/GDCM/test/itkGDCMImagePositionPatientTest.cxx In file included from /<>/Modules/IO/GDCM/test/itkGDCMImagePositionPatientTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageOrientationPatientTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkOrientImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkOrientImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGrid/include/itkOrientImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkPermuteAxesImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkOrientImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GDCM/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageIOOrthoDirTest.cxx.o -c /<>/Modules/IO/GDCM/test/itkGDCMImageIOOrthoDirTest.cxx In file included from /<>/Modules/IO/GDCM/test/itkGDCMImageIOOrthoDirTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/GDCM/test/CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMLoadImageSpacingTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkNeighborhoodAlgorithmTest.cxx.o -c /<>/Modules/Core/Common/test/itkNeighborhoodAlgorithmTest.cxx In file included from /<>/Modules/Core/Common/test/itkNeighborhoodAlgorithmTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodAlgorithm.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkPhasedArray3DSpecialCoordinatesImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GDCM/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMLoadImageSpacingTest.cxx.o -c /<>/Modules/IO/GDCM/test/itkGDCMLoadImageSpacingTest.cxx In file included from /<>/Modules/IO/GDCM/test/itkGDCMLoadImageSpacingTest.cxx:20: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIO.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkTimeVaryingVelocityFieldImageRegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkTimeVaryingVelocityFieldImageRegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkTimeVaryingVelocityFieldImageRegistrationTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSyNImageRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSyNPointSetRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkOrientImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkOrientImageFilterTest2.cxx:19: In file included from /<>/Modules/Filtering/ImageGrid/include/itkOrientImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkPermuteAxesImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkWarpImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GDCM/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageOrientationPatientTest.cxx.o -c /<>/Modules/IO/GDCM/test/itkGDCMImageOrientationPatientTest.cxx In file included from /<>/Modules/IO/GDCM/test/itkGDCMImageOrientationPatientTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/ITKIOGDCMTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderStreamingTest2.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileReaderStreamingTest2.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileReaderStreamingTest2.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterPastingTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GDCM/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOGDCMTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOGDCMTestDriver.dir/ITKIOGDCMTestDriver.cxx.o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageIOTest.cxx.o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageIOTest2.cxx.o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageIONoCrashTest.cxx.o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageReadSeriesWriteTest.cxx.o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMSeriesReadImageWriteTest.cxx.o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMSeriesMissingDicomTagTest.cxx.o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMSeriesStreamReadImageWriteTest.cxx.o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImagePositionPatientTest.cxx.o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageIOOrthoDirTest.cxx.o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMImageOrientationPatientTest.cxx.o CMakeFiles/ITKIOGDCMTestDriver.dir/itkGDCMLoadImageSpacingTest.cxx.o -o ../../../../bin/ITKIOGDCMTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKIOGDCMTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTI-TestSupport.dir/build.make Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTI-TestSupport.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NIFTI/test /<>/BUILD /<>/BUILD/Modules/IO/NIFTI/test /<>/BUILD/Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTI-TestSupport.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONIFTI-TestSupport make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTI-TestSupport.dir/build.make Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTI-TestSupport.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkPhasedArray3DSpecialCoordinatesImageTest.cxx.o -c /<>/Modules/Core/Common/test/itkPhasedArray3DSpecialCoordinatesImageTest.cxx In file included from /<>/Modules/Core/Common/test/itkPhasedArray3DSpecialCoordinatesImageTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkPhasedArray3DSpecialCoordinatesImage.h:21: In file included from /<>/Modules/Core/Common/include/itkSpecialCoordinatesImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTI-TestSupport.dir/itkNiftiImageIOTestHelper.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkPriorityQueueTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkPriorityQueueTest.cxx.o -c /<>/Modules/Core/Common/test/itkPriorityQueueTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkFileOutputWindowTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkFileOutputWindowTest.cxx.o -c /<>/Modules/Core/Common/test/itkFileOutputWindowTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkSymmetricEigenAnalysisTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/JPEG/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/JPEG/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOJPEGTestDriver.dir/ITKIOJPEGTestDriver.cxx.o -c /<>/BUILD/Modules/IO/JPEG/test/ITKIOJPEGTestDriver.cxx In file included from /<>/BUILD/Modules/IO/JPEG/test/ITKIOJPEGTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/JPEG/test/CMakeFiles/ITKIOJPEGTestDriver.dir/itkJPEGImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterPastingTest1.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileWriterPastingTest1.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileWriterPastingTest1.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterPastingTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -DITKIONIFTI_TestSupport_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKIONIFTI-TestSupport.dir/itkNiftiImageIOTestHelper.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTestHelper.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTestHelper.cxx:19: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX shared library ../../../../lib/libITKIONIFTI-TestSupport.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkSymmetricEigenAnalysisTest.cxx.o -c /<>/Modules/Core/Common/test/itkSymmetricEigenAnalysisTest.cxx In file included from /<>/Modules/Core/Common/test/itkSymmetricEigenAnalysisTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkSTLThreadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIONIFTI-TestSupport.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIONIFTI-TestSupport.so -o ../../../../lib/libITKIONIFTI-TestSupport.so CMakeFiles/ITKIONIFTI-TestSupport.dir/itkNiftiImageIOTestHelper.cxx.o -lznz -lniftiio -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKIONIFTI-TestSupport make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/build.make Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NRRD/test /<>/BUILD /<>/BUILD/Modules/IO/NRRD/test /<>/BUILD/Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONRRDTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/build.make Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/ITKIONRRDTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkWarpImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkWarpImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkWarpImageFilterTest.cxx:22: In file included from /<>/Modules/Filtering/ImageGrid/include/itkWarpImageFilter.h:20: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkWarpImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkSTLThreadTest.cxx.o -c /<>/Modules/Core/Common/test/itkSTLThreadTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkStreamingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/JPEG/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/JPEG/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOJPEGTestDriver.dir/itkJPEGImageIOTest.cxx.o -c /<>/Modules/IO/JPEG/test/itkJPEGImageIOTest.cxx In file included from /<>/Modules/IO/JPEG/test/itkJPEGImageIOTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/JPEG/test/CMakeFiles/ITKIOJPEGTestDriver.dir/itkJPEGImageIOTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/ITKIOMetaTestDriver.cxx.o -c /<>/BUILD/Modules/IO/Meta/test/ITKIOMetaTestDriver.cxx In file included from /<>/BUILD/Modules/IO/Meta/test/ITKIOMetaTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageIOMetaDataTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkStreamingImageFilterTest.cxx.o -c /<>/Modules/Core/Common/test/itkStreamingImageFilterTest.cxx In file included from /<>/Modules/Core/Common/test/itkStreamingImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageGrid/include/itkShrinkImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkStreamingImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkWarpImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkWarpImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkWarpImageFilterTest2.cxx:19: In file included from /<>/Modules/Filtering/ImageGrid/include/itkWarpImageFilter.h:20: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkWarpVectorImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterPastingTest2.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileWriterPastingTest2.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileWriterPastingTest2.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterPastingTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/JPEG/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/JPEG/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOJPEGTestDriver.dir/itkJPEGImageIOTest2.cxx.o -c /<>/Modules/IO/JPEG/test/itkJPEGImageIOTest2.cxx In file included from /<>/Modules/IO/JPEG/test/itkJPEGImageIOTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/ITKIOJPEGTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkStreamingImageFilterTest2.cxx.o -c /<>/Modules/Core/Common/test/itkStreamingImageFilterTest2.cxx In file included from /<>/Modules/Core/Common/test/itkStreamingImageFilterTest2.cxx:20: In file included from /<>/Modules/Filtering/ImageGrid/include/itkShrinkImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkStreamingImageFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/JPEG/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOJPEGTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOJPEGTestDriver.dir/ITKIOJPEGTestDriver.cxx.o CMakeFiles/ITKIOJPEGTestDriver.dir/itkJPEGImageIOTest.cxx.o CMakeFiles/ITKIOJPEGTestDriver.dir/itkJPEGImageIOTest2.cxx.o -o ../../../../bin/ITKIOJPEGTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKIOJPEGTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/PNG/test/CMakeFiles/ITKIOPNGTestDriver.dir/build.make Modules/IO/PNG/test/CMakeFiles/ITKIOPNGTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/PNG/test /<>/BUILD /<>/BUILD/Modules/IO/PNG/test /<>/BUILD/Modules/IO/PNG/test/CMakeFiles/ITKIOPNGTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOPNGTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/PNG/test/CMakeFiles/ITKIOPNGTestDriver.dir/build.make Modules/IO/PNG/test/CMakeFiles/ITKIOPNGTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/PNG/test/CMakeFiles/ITKIOPNGTestDriver.dir/ITKIOPNGTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageIOMetaDataTest.cxx.o -c /<>/Modules/IO/Meta/test/itkMetaImageIOMetaDataTest.cxx In file included from /<>/Modules/IO/Meta/test/itkMetaImageIOMetaDataTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageIOGzTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkWarpVectorImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkWarpVectorImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkWarpVectorImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkWarpVectorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkWrapPadImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageIOGzTest.cxx.o -c /<>/Modules/IO/Meta/test/itkMetaImageIOGzTest.cxx In file included from /<>/Modules/IO/Meta/test/itkMetaImageIOGzTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkStreamingImageFilterTest3.cxx.o -c /<>/Modules/Core/Common/test/itkStreamingImageFilterTest3.cxx In file included from /<>/Modules/Core/Common/test/itkStreamingImageFilterTest3.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkLoggerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterPastingTest3.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileWriterPastingTest3.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileWriterPastingTest3.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterStreamingPastingCompressingTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkLoggerTest.cxx.o -c /<>/Modules/Core/Common/test/itkLoggerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkDerivativeOperatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkWrapPadImageTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkWrapPadImageTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkWrapPadImageTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkStreamingImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkMirrorPadImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkDerivativeOperatorTest.cxx.o -c /<>/Modules/Core/Common/test/itkDerivativeOperatorTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkColorTableTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageIOTest.cxx.o -c /<>/Modules/IO/Meta/test/itkMetaImageIOTest.cxx In file included from /<>/Modules/IO/Meta/test/itkMetaImageIOTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageIOTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkMirrorPadImageTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkMirrorPadImageTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkMirrorPadImageTest.cxx:20: In file included from /<>/Modules/Filtering/ImageGrid/include/itkMirrorPadImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkPadImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkPadImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterStreamingPastingCompressingTest1.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileWriterStreamingPastingCompressingTest1.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileWriterStreamingPastingCompressingTest1.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterStreamingTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkColorTableTest.cxx.o -c /<>/Modules/Core/Common/test/itkColorTableTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkNumericTraitsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageIOTest2.cxx.o -c /<>/Modules/IO/Meta/test/itkMetaImageIOTest2.cxx In file included from /<>/Modules/IO/Meta/test/itkMetaImageIOTest2.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/itkLargeMetaImageWriteReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkResampleImageTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkResampleImageTest.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterStreamingTest1.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileWriterStreamingTest1.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileWriterStreamingTest1.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterStreamingTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/itkLargeMetaImageWriteReadTest.cxx.o -c /<>/Modules/IO/Meta/test/itkLargeMetaImageWriteReadTest.cxx In file included from /<>/Modules/IO/Meta/test/itkLargeMetaImageWriteReadTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaArray.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/ITKIONRRDTestDriver.cxx.o -c /<>/BUILD/Modules/IO/NRRD/test/ITKIONRRDTestDriver.cxx In file included from /<>/BUILD/Modules/IO/NRRD/test/ITKIONRRDTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaArray.cxx.o -c /<>/Modules/IO/Meta/test/testMetaArray.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaBlob.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaBlob.cxx.o -c /<>/Modules/IO/Meta/test/testMetaBlob.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaCommand.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest2.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkResampleImageTest2.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkResampleImageTest2.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaCommand.cxx.o -c /<>/Modules/IO/Meta/test/testMetaCommand.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaGroup.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSyNPointSetRegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkSyNPointSetRegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkSyNPointSetRegistrationTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaGroup.cxx.o -c /<>/Modules/IO/Meta/test/testMetaGroup.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkBSplineSyNImageRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaImage.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterStreamingTest2.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileWriterStreamingTest2.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileWriterStreamingTest2.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaImage.cxx.o -c /<>/Modules/IO/Meta/test/testMetaImage.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaLandmark.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaLandmark.cxx.o -c /<>/Modules/IO/Meta/test/testMetaLandmark.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaLine.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaLine.cxx.o -c /<>/Modules/IO/Meta/test/testMetaLine.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaMesh.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/PNG/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/PNG/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOPNGTestDriver.dir/ITKIOPNGTestDriver.cxx.o -c /<>/BUILD/Modules/IO/PNG/test/ITKIOPNGTestDriver.cxx In file included from /<>/BUILD/Modules/IO/PNG/test/ITKIOPNGTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/PNG/test/CMakeFiles/ITKIOPNGTestDriver.dir/itkPNGImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaMesh.cxx.o -c /<>/Modules/IO/Meta/test/testMetaMesh.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaObject.cxx.o -c /<>/Modules/IO/Meta/test/testMetaObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaScene.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaScene.cxx.o -c /<>/Modules/IO/Meta/test/testMetaScene.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaSurface.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterTest2.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileWriterTest2.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileWriterTest2.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterUpdateLargestPossibleRegionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaSurface.cxx.o -c /<>/Modules/IO/Meta/test/testMetaSurface.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaTube.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest3.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkResampleImageTest3.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkResampleImageTest3.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaTube.cxx.o -c /<>/Modules/IO/Meta/test/testMetaTube.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/testMetaUtils.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaUtils.cxx.o -c /<>/Modules/IO/Meta/test/testMetaUtils.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageStreamingIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterUpdateLargestPossibleRegionTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageFileWriterUpdateLargestPossibleRegionTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageFileWriterUpdateLargestPossibleRegionTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageIOBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageIOBaseTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageIOBaseTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageIOBaseTest.cxx:19: In file included from /<>/Modules/IO/Meta/include/itkMetaImageIO.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageIODirection2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest4.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkResampleImageTest4.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkResampleImageTest4.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/PNG/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/PNG/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOPNGTestDriver.dir/itkPNGImageIOTest.cxx.o -c /<>/Modules/IO/PNG/test/itkPNGImageIOTest.cxx In file included from /<>/Modules/IO/PNG/test/itkPNGImageIOTest.cxx:20: In file included from /<>/Modules/IO/PNG/include/itkPNGImageIO.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/PNG/test/CMakeFiles/ITKIOPNGTestDriver.dir/itkPNGImageIOTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageStreamingIOTest.cxx.o -c /<>/Modules/IO/Meta/test/itkMetaImageStreamingIOTest.cxx In file included from /<>/Modules/IO/Meta/test/itkMetaImageStreamingIOTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageStreamingWriterIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageIODirection2DTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageIODirection2DTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageIODirection2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageIODirection3DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/PNG/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/PNG/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOPNGTestDriver.dir/itkPNGImageIOTest2.cxx.o -c /<>/Modules/IO/PNG/test/itkPNGImageIOTest2.cxx In file included from /<>/Modules/IO/PNG/test/itkPNGImageIOTest2.cxx:21: In file included from /<>/Modules/IO/PNG/include/itkPNGImageIO.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/PNG/test/CMakeFiles/ITKIOPNGTestDriver.dir/itkPNGImageIOTestPalette.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest5.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkResampleImageTest5.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkResampleImageTest5.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageIODirection3DTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageIODirection3DTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageIODirection3DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageIOFileNameExtensionsTests.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageStreamingWriterIOTest.cxx.o -c /<>/Modules/IO/Meta/test/itkMetaImageStreamingWriterIOTest.cxx In file included from /<>/Modules/IO/Meta/test/itkMetaImageStreamingWriterIOTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/Meta/test/CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaTestLongFilename.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaTestLongFilename.cxx.o -c /<>/Modules/IO/Meta/test/itkMetaTestLongFilename.cxx In file included from /<>/Modules/IO/Meta/test/itkMetaTestLongFilename.cxx:18: In file included from /<>/Modules/IO/Meta/include/itkMetaImageIO.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/ITKIOMetaTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageIOFileNameExtensionsTests.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageIOFileNameExtensionsTests.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageIOFileNameExtensionsTests.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageSeriesReaderDimensionsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Meta/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOMetaTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOMetaTestDriver.dir/ITKIOMetaTestDriver.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageIOMetaDataTest.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageIOGzTest.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageIOTest.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageIOTest2.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/itkLargeMetaImageWriteReadTest.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaArray.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaBlob.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaCommand.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaGroup.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaImage.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaLandmark.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaLine.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaMesh.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaObject.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaScene.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaSurface.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaTube.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/testMetaUtils.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageStreamingIOTest.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaImageStreamingWriterIOTest.cxx.o CMakeFiles/ITKIOMetaTestDriver.dir/itkMetaTestLongFilename.cxx.o -o ../../../../bin/ITKIOMetaTestDriver ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKIOMetaTestDriver make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkBSplineSyNPointSetRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/PNG/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/PNG/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOPNGTestDriver.dir/itkPNGImageIOTestPalette.cxx.o -c /<>/Modules/IO/PNG/test/itkPNGImageIOTestPalette.cxx In file included from /<>/Modules/IO/PNG/test/itkPNGImageIOTestPalette.cxx:21: In file included from /<>/Modules/IO/PNG/include/itkPNGImageIO.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/ITKIOPNGTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/PNG/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOPNGTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOPNGTestDriver.dir/ITKIOPNGTestDriver.cxx.o CMakeFiles/ITKIOPNGTestDriver.dir/itkPNGImageIOTest.cxx.o CMakeFiles/ITKIOPNGTestDriver.dir/itkPNGImageIOTest2.cxx.o CMakeFiles/ITKIOPNGTestDriver.dir/itkPNGImageIOTestPalette.cxx.o -o ../../../../bin/ITKIOPNGTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKIOPNGTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TIFF/test/CMakeFiles/ITKIOTIFFTestDriver.dir/build.make Modules/IO/TIFF/test/CMakeFiles/ITKIOTIFFTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TIFF/test /<>/BUILD /<>/BUILD/Modules/IO/TIFF/test /<>/BUILD/Modules/IO/TIFF/test/CMakeFiles/ITKIOTIFFTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTIFFTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TIFF/test/CMakeFiles/ITKIOTIFFTestDriver.dir/build.make Modules/IO/TIFF/test/CMakeFiles/ITKIOTIFFTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/TIFF/test/CMakeFiles/ITKIOTIFFTestDriver.dir/ITKIOTIFFTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest6.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkResampleImageTest6.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkResampleImageTest6.cxx:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkResamplePhasedArray3DSpecialCoordinatesImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkResamplePhasedArray3DSpecialCoordinatesImageTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkResamplePhasedArray3DSpecialCoordinatesImageTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkResamplePhasedArray3DSpecialCoordinatesImageTest.cxx:23: In file included from /<>/Modules/Core/Common/include/itkPhasedArray3DSpecialCoordinatesImage.h:21: In file included from /<>/Modules/Core/Common/include/itkSpecialCoordinatesImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkPushPopTileImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageSeriesReaderDimensionsTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageSeriesReaderDimensionsTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageSeriesReaderDimensionsTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageSeriesReader.h:26: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageSeriesReaderVectorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSyNImageRegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkSyNImageRegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkSyNImageRegistrationTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/TIFF/test/CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkPushPopTileImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkPushPopTileImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkPushPopTileImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGrid/include/itkTileImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkShrinkImageStreamingTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageSeriesReaderVectorTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageSeriesReaderVectorTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageSeriesReaderVectorTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageSeriesReader.h:26: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageSeriesWriterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkNumericTraitsTest.cxx.o -c /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx In file included from /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:37: In file included from /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:22: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:377:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:378:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:379:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:381:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:383:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:385:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:387:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:389:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:391:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:393:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:395:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:397:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:398:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:399:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:403:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:404:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:405:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:407:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:409:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:411:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:413:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:415:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:417:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:419:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:421:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:423:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:424:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:425:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:429:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:430:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:431:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:433:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:435:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:437:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:439:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:441:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:443:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:445:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:447:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:449:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:450:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:451:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:455:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:456:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:457:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:459:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:461:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:463:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:465:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:467:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:469:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:471:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:473:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:475:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:476:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:477:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:481:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:482:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:483:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:485:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:487:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:489:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:491:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:493:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:495:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:497:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:499:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:501:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:502:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:503:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::CovariantVector()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsCovariantVectorPixel.h:185:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:507:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:508:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:509:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:511:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:513:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:515:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:517:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:519:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:521:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:523:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:525:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:527:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:528:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:529:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:533:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:534:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:535:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:537:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:539:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:541:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:543:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:545:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:547:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:549:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:551:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:553:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:554:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:555:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:559:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:560:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:561:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:563:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:565:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:567:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:569:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:571:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:573:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:575:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:577:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:579:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:580:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:581:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:585:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:586:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:587:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:589:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:591:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:593:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:595:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:597:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:599:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:601:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:603:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:605:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:606:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:607:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:611:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:612:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:613:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:615:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:617:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:619:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:621:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:623:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:625:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:627:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:629:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:631:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:632:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:633:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::FixedArray()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:180:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsFixedArrayPixel.h:181:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:637:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:638:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:639:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:641:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:643:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:645:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:647:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:649:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:651:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:653:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:655:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:657:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:658:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:659:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:663:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:664:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:665:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:667:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:669:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:671:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:673:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:675:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:677:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:679:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:681:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:683:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:684:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:685:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:689:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:690:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:691:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:693:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:695:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:697:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:699:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:701:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:703:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:705:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:707:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:709:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:710:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:711:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:715:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:716:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:717:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:719:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:721:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:723:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:725:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:727:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:729:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:731:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:733:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:735:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:736:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:737:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:741:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:742:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:743:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:745:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:747:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:749:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:751:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:753:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:755:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:757:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:759:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:761:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:762:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:763:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::Point()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:171:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsPointPixel.h:172:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:767:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:768:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:769:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:771:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:773:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:775:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:777:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:779:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:781:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:783:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:785:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:787:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:788:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:789:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:793:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:794:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:795:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:797:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:799:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:801:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:803:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:805:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:807:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:809:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:811:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:813:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:814:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:815:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::RGBAPixel()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:183:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsRGBAPixel.h:184:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:819:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:820:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:821:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:823:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:825:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:827:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:829:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:831:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:833:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:835:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:837:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:839:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:840:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:841:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:845:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:846:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:847:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:849:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:851:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:853:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:855:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:857:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:859:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:861:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:863:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:865:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:866:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:867:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:871:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:872:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:873:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:875:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:877:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:879:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:881:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:883:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:885:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:887:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:889:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:891:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:892:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:893:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:897:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:898:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:899:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:901:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:903:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:905:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:907:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:909:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:911:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:913:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:915:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:917:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:918:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:919:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:923:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:924:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:925:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:927:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:929:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:931:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:933:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:935:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:937:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:939:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:941:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:943:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:944:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: warning: instantiation of variable 'itk::NumericTraits >::Zero' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:945:3: note: in instantiation of function template specialization '(anonymous namespace)::CheckFixedArrayTraits >' requested here CheckFixedArrayTraits(itk::SymmetricSecondRankTensor()); ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:186:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT Zero; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:129:108: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::Zero' is explicitly instantiated in another translation unit std::cout << "\tZero: " << static_cast::PrintType>(itk::NumericTraits::Zero) << std::endl; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: warning: instantiation of variable 'itk::NumericTraits >::One' required here, but no definition is available [-Wundefined-var-template] std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ /<>/Modules/Core/Common/include/itkNumericTraitsTensorPixel.h:187:38: note: forward declaration of template entity is here static const Self ITKCommon_EXPORT One; ^ /<>/Modules/Core/Common/test/itkNumericTraitsTest.cxx:130:107: note: add an explicit instantiation declaration to suppress this warning if 'itk::NumericTraits >::One' is explicitly instantiated in another translation unit std::cout << "\tOne: " << static_cast::PrintType>(itk::NumericTraits::One) << std::endl; ^ 617 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageRegionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkShrinkImageStreamingTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkShrinkImageStreamingTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkShrinkImageStreamingTest.cxx:20: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkCastImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkShrinkImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRegionTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageRegionTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageRegionTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkExceptionObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkExceptionObjectTest.cxx.o -c /<>/Modules/Core/Common/test/itkExceptionObjectTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkNeighborhoodOperatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdImageIOTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdImageIOTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdImageIOTest.cxx:21: In file included from /<>/Modules/IO/NRRD/test/itkNrrdImageIOTest.h:22: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdComplexImageReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkShrinkImageTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkShrinkImageTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkShrinkImageTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkZeroFluxNeumannPadImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkNeighborhoodOperatorTest.cxx.o -c /<>/Modules/Core/Common/test/itkNeighborhoodOperatorTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkNumericsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkNumericsTest.cxx.o -c /<>/Modules/Core/Common/test/itkNumericsTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkAnnulusOperatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageSeriesWriterTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkImageSeriesWriterTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkImageSeriesWriterTest.cxx:19: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIO.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkIOPluginTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkZeroFluxNeumannPadImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkZeroFluxNeumannPadImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkZeroFluxNeumannPadImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkZeroFluxNeumannPadImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkPadImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkPadImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkSliceBySliceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkAnnulusOperatorTest.cxx.o -c /<>/Modules/Core/Common/test/itkAnnulusOperatorTest.cxx In file included from /<>/Modules/Core/Common/test/itkAnnulusOperatorTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkAnnulusOperator.h:235: In file included from /<>/Modules/Core/Common/include/itkAnnulusOperator.hxx:23: In file included from /<>/Modules/Core/Common/include/itkSphereSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkLineIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdComplexImageReadTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdComplexImageReadTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdComplexImageReadTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdComplexImageReadWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkLineIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkLineIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkLineIteratorTest.cxx:23: In file included from /<>/Modules/Core/Common/include/itkLineIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkLineConstIterator.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkGaussianSpatialFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkGaussianSpatialFunctionTest.cxx.o -c /<>/Modules/Core/Common/test/itkGaussianSpatialFunctionTest.cxx In file included from /<>/Modules/Core/Common/test/itkGaussianSpatialFunctionTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkGaussianSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkRealTimeClockTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkRealTimeClockTest.cxx.o -c /<>/Modules/Core/Common/test/itkRealTimeClockTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkRealTimeIntervalTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkIOPluginTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkIOPluginTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkIOPluginTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkNoiseImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkRealTimeIntervalTest.cxx.o -c /<>/Modules/Core/Common/test/itkRealTimeIntervalTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkRealTimeStampTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/TIFF/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTIFFTestDriver.dir/ITKIOTIFFTestDriver.cxx.o -c /<>/BUILD/Modules/IO/TIFF/test/ITKIOTIFFTestDriver.cxx In file included from /<>/BUILD/Modules/IO/TIFF/test/ITKIOTIFFTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/TIFF/test/CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdComplexImageReadWriteTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdComplexImageReadWriteTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdComplexImageReadWriteTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdCovariantVectorImageReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkRealTimeStampTest.cxx.o -c /<>/Modules/Core/Common/test/itkRealTimeStampTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkIntTypesTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkIntTypesTest.cxx.o -c /<>/Modules/Core/Common/test/itkIntTypesTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkBSplineKernelFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkBSplineKernelFunctionTest.cxx.o -c /<>/Modules/Core/Common/test/itkBSplineKernelFunctionTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkArrayTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkArrayTest.cxx.o -c /<>/Modules/Core/Common/test/itkArrayTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkSliceBySliceImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkSliceBySliceImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkSliceBySliceImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGrid/include/itkSliceBySliceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageGrid/test/CMakeFiles/ITKImageGridTestDriver.dir/itkPadImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdCovariantVectorImageReadTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdCovariantVectorImageReadTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdCovariantVectorImageReadTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdCovariantVectorImageReadWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageIteratorTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageRegionIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/TIFF/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOTest2.cxx.o -c /<>/Modules/IO/TIFF/test/itkTIFFImageIOTest2.cxx In file included from /<>/Modules/IO/TIFF/test/itkTIFFImageIOTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/TIFF/test/CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOCompressionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGridTestDriver.dir/itkPadImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGrid/test/itkPadImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGrid/test/itkPadImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkConstantBoundaryCondition.h:22: In file included from /<>/Modules/Core/Common/include/itkImageBoundaryCondition.h:23: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/ITKImageGridTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkNoiseImageFilterTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkNoiseImageFilterTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkNoiseImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkNoiseImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkMatrixImageWriteReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRegionIteratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageRegionIteratorTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageRegionIteratorTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageScanlineIteratorTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGrid/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageGridTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageGridTestDriver.dir/ITKImageGridTestDriver.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBasicArchitectureTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBinShrinkImageFilterTest1.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBinShrinkImageFilterTest2.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest2.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest3.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest4.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineScatteredDataPointSetToImageFilterTest5.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineControlPointImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineControlPointImageFunctionTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkChangeInformationImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkConstantPadImageTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkCoxDeBoorBSplineKernelFunctionTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkCoxDeBoorBSplineKernelFunctionTest2.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkCyclicReferences.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkCyclicShiftImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkInterpolateImagePointsFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkCropImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkCropImageFilter3DTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkFlipImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkExpandImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkRegionOfInterestImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineUpsampleImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineResampleImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkBSplineDownsampleImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkTileImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkInterpolateImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkPasteImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkVectorResampleImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkPermuteAxesImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImage2DTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImage3DTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImageAdaptorTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImageProfileTest1.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImageProfileTest2.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientedImageProfileTest3.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkOrientImageFilterTest2.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkWarpImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkWarpImageFilterTest2.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkWarpVectorImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkWrapPadImageTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkMirrorPadImageTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest2.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest3.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest4.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest5.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkResampleImageTest6.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkResamplePhasedArray3DSpecialCoordinatesImageTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkPushPopTileImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkShrinkImageStreamingTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkShrinkImageTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkZeroFluxNeumannPadImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkSliceBySliceImageFilterTest.cxx.o CMakeFiles/ITKImageGridTestDriver.dir/itkPadImageFilterTest.cxx.o -o ../../../../bin/ITKImageGridTestDriver ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKImageGridTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/VTK/test/CMakeFiles/ITKIOVTKTestDriver.dir/build.make Modules/IO/VTK/test/CMakeFiles/ITKIOVTKTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/VTK/test /<>/BUILD /<>/BUILD/Modules/IO/VTK/test /<>/BUILD/Modules/IO/VTK/test/CMakeFiles/ITKIOVTKTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOVTKTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/VTK/test/CMakeFiles/ITKIOVTKTestDriver.dir/build.make Modules/IO/VTK/test/CMakeFiles/ITKIOVTKTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/VTK/test/CMakeFiles/ITKIOVTKTestDriver.dir/ITKIOVTKTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdCovariantVectorImageReadWriteTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdCovariantVectorImageReadWriteTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdCovariantVectorImageReadWriteTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdDiffusionTensor3DImageReadTensorDoubleWriteTensorDoubleTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageScanlineIteratorTest1.cxx.o -c /<>/Modules/Core/Common/test/itkImageScanlineIteratorTest1.cxx In file included from /<>/Modules/Core/Common/test/itkImageScanlineIteratorTest1.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImageScanlineIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageScanlineConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkCrossHelperTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkCrossHelperTest.cxx.o -c /<>/Modules/Core/Common/test/itkCrossHelperTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageIteratorWithIndexTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkMatrixImageWriteReadTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkMatrixImageWriteReadTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkMatrixImageWriteReadTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkReadWriteImageWithDictionaryTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkBSplineSyNPointSetRegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkBSplineSyNPointSetRegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkBSplineSyNPointSetRegistrationTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkTimeVaryingBSplineVelocityFieldPointSetRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdDiffusionTensor3DImageReadTensorDoubleWriteTensorDoubleTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdDiffusionTensor3DImageReadTensorDoubleWriteTensorDoubleTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdDiffusionTensor3DImageReadTensorDoubleWriteTensorDoubleTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdDiffusionTensor3DImageReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/TIFF/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOTest.cxx.o -c /<>/Modules/IO/TIFF/test/itkTIFFImageIOTest.cxx In file included from /<>/Modules/IO/TIFF/test/itkTIFFImageIOTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/TIFF/test/CMakeFiles/ITKIOTIFFTestDriver.dir/itkLargeTIFFImageWriteReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkReadWriteImageWithDictionaryTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkReadWriteImageWithDictionaryTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkReadWriteImageWithDictionaryTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/ImageBase/test/CMakeFiles/ITKIOImageBaseTestDriver.dir/itkVectorImageReadWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdDiffusionTensor3DImageReadTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdDiffusionTensor3DImageReadTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdDiffusionTensor3DImageReadTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdDiffusionTensor3DImageReadWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageIteratorWithIndexTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageIteratorWithIndexTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageIteratorWithIndexTest.cxx:22: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkDirectoryTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkDirectoryTest.cxx.o -c /<>/Modules/Core/Common/test/itkDirectoryTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkObjectStoreTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkObjectStoreTest.cxx.o -c /<>/Modules/Core/Common/test/itkObjectStoreTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkObjectFactoryTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/TIFF/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTIFFTestDriver.dir/itkLargeTIFFImageWriteReadTest.cxx.o -c /<>/Modules/IO/TIFF/test/itkLargeTIFFImageWriteReadTest.cxx In file included from /<>/Modules/IO/TIFF/test/itkLargeTIFFImageWriteReadTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/TIFF/test/CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOInfoTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkObjectFactoryTest.cxx.o -c /<>/Modules/Core/Common/test/itkObjectFactoryTest.cxx In file included from /<>/Modules/Core/Common/test/itkObjectFactoryTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkEventObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkVectorImageReadWriteTest.cxx.o -c /<>/Modules/IO/ImageBase/test/itkVectorImageReadWriteTest.cxx In file included from /<>/Modules/IO/ImageBase/test/itkVectorImageReadWriteTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/ITKIOImageBaseTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkEventObjectTest.cxx.o -c /<>/Modules/Core/Common/test/itkEventObjectTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkMathCastWithRangeCheckTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/ImageBase/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOImageBaseTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOImageBaseTestDriver.dir/ITKIOImageBaseTestDriver.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkConvertBufferTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkConvertBufferTest2.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderTest1.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkIOCommonTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkIOCommonTest2.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkNumericSeriesFileNamesTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkRegularExpressionSeriesFileNamesTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkArchetypeSeriesFileNamesTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkLargeImageWriteConvertReadTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkLargeImageWriteReadTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderDimensionsTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderPositiveSpacingTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderStreamingTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileReaderStreamingTest2.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterPastingTest1.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterPastingTest2.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterPastingTest3.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterStreamingPastingCompressingTest1.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterStreamingTest1.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterStreamingTest2.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterTest2.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageFileWriterUpdateLargestPossibleRegionTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageIOBaseTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageIODirection2DTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageIODirection3DTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageIOFileNameExtensionsTests.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageSeriesReaderDimensionsTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageSeriesReaderVectorTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkImageSeriesWriterTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkIOPluginTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkNoiseImageFilterTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkMatrixImageWriteReadTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkReadWriteImageWithDictionaryTest.cxx.o CMakeFiles/ITKIOImageBaseTestDriver.dir/itkVectorImageReadWriteTest.cxx.o -o ../../../../bin/ITKIOImageBaseTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKIOImageBaseTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/TestKernel/test/CMakeFiles/ITKTestKernelTestDriver.dir/build.make Modules/Core/TestKernel/test/CMakeFiles/ITKTestKernelTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/TestKernel/test /<>/BUILD /<>/BUILD/Modules/Core/TestKernel/test /<>/BUILD/Modules/Core/TestKernel/test/CMakeFiles/ITKTestKernelTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTestKernelTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/TestKernel/test/CMakeFiles/ITKTestKernelTestDriver.dir/build.make Modules/Core/TestKernel/test/CMakeFiles/ITKTestKernelTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/TestKernel/test/CMakeFiles/ITKTestKernelTestDriver.dir/ITKTestKernelTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdDiffusionTensor3DImageReadWriteTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdDiffusionTensor3DImageReadWriteTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdDiffusionTensor3DImageReadWriteTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdImageReadWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkMathCastWithRangeCheckTest.cxx.o -c /<>/Modules/Core/Common/test/itkMathCastWithRangeCheckTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkMathRoundProfileTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkMathRoundProfileTest1.cxx.o -c /<>/Modules/Core/Common/test/itkMathRoundProfileTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkMathRoundTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/TIFF/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOInfoTest.cxx.o -c /<>/Modules/IO/TIFF/test/itkTIFFImageIOInfoTest.cxx In file included from /<>/Modules/IO/TIFF/test/itkTIFFImageIOInfoTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/TIFF/test/CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOTestPalette.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdImageReadWriteTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdImageReadWriteTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdImageReadWriteTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdRGBAImageReadWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkMathRoundTest.cxx.o -c /<>/Modules/Core/Common/test/itkMathRoundTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkMathRoundTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkMathRoundTest2.cxx.o -c /<>/Modules/Core/Common/test/itkMathRoundTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkModifiedTimeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkModifiedTimeTest.cxx.o -c /<>/Modules/Core/Common/test/itkModifiedTimeTest.cxx In file included from /<>/Modules/Core/Common/test/itkModifiedTimeTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkBoundingBox.h:31: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkMultipleLogOutputTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkMultipleLogOutputTest.cxx.o -c /<>/Modules/Core/Common/test/itkMultipleLogOutputTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkVectorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdRGBAImageReadWriteTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdRGBAImageReadWriteTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdRGBAImageReadWriteTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdRGBImageReadWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkVectorTest.cxx.o -c /<>/Modules/Core/Common/test/itkVectorTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/TIFF/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOTestPalette.cxx.o -c /<>/Modules/IO/TIFF/test/itkTIFFImageIOTestPalette.cxx In file included from /<>/Modules/IO/TIFF/test/itkTIFFImageIOTestPalette.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/TestKernel/test/CMakeFiles/ITKTestKernelTestDriver.dir/itkTestingExtractSliceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkImageTest.cxx.o -c /<>/Modules/Core/Common/test/itkImageTest.cxx In file included from /<>/Modules/Core/Common/test/itkImageTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkConditionVariableTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkConditionVariableTest.cxx.o -c /<>/Modules/Core/Common/test/itkConditionVariableTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkPointSetTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/TestKernel/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTestKernelTestDriver.dir/itkTestingExtractSliceImageFilterTest.cxx.o -c /<>/Modules/Core/TestKernel/test/itkTestingExtractSliceImageFilterTest.cxx In file included from /<>/Modules/Core/TestKernel/test/itkTestingExtractSliceImageFilterTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkBSplineSyNImageRegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkBSplineSyNImageRegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkBSplineSyNImageRegistrationTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/TestKernel/test/CMakeFiles/ITKTestKernelTestDriver.dir/itkTestingStretchIntensityImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkQuasiNewtonOptimizerv4RegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkPointSetTest.cxx.o -c /<>/Modules/Core/Common/test/itkPointSetTest.cxx In file included from /<>/Modules/Core/Common/test/itkPointSetTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkBresenhamLineTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdRGBImageReadWriteTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdRGBImageReadWriteTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdRGBImageReadWriteTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdVectorImageReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/VTK/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOVTKTestDriver.dir/ITKIOVTKTestDriver.cxx.o -c /<>/BUILD/Modules/IO/VTK/test/ITKIOVTKTestDriver.cxx In file included from /<>/BUILD/Modules/IO/VTK/test/ITKIOVTKTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/VTK/test/CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIO2Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkBresenhamLineTest.cxx.o -c /<>/Modules/Core/Common/test/itkBresenhamLineTest.cxx In file included from /<>/Modules/Core/Common/test/itkBresenhamLineTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkBresenhamLine.h:56: In file included from /<>/Modules/Core/Common/include/itkBresenhamLine.hxx:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkSparseFieldLayerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkSparseFieldLayerTest.cxx.o -c /<>/Modules/Core/Common/test/itkSparseFieldLayerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkDataObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/TestKernel/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTestKernelTestDriver.dir/itkTestingStretchIntensityImageFilterTest.cxx.o -c /<>/Modules/Core/TestKernel/test/itkTestingStretchIntensityImageFilterTest.cxx In file included from /<>/Modules/Core/TestKernel/test/itkTestingStretchIntensityImageFilterTest.cxx:20: In file included from /<>/Modules/Core/TestKernel/include/itkTestingStretchIntensityImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkAtanRegularizedHeavisideStepFunctionTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkDataObjectTest.cxx.o -c /<>/Modules/Core/Common/test/itkDataObjectTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkHashTableTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkAtanRegularizedHeavisideStepFunctionTest1.cxx.o -c /<>/Modules/Core/Common/test/itkAtanRegularizedHeavisideStepFunctionTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkHeavisideStepFunctionTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdVectorImageReadTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdVectorImageReadTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdVectorImageReadTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdVectorImageReadWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkHashTableTest.cxx.o -c /<>/Modules/Core/Common/test/itkHashTableTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkSinRegularizedHeavisideStepFunctionTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkHeavisideStepFunctionTest1.cxx.o -c /<>/Modules/Core/Common/test/itkHeavisideStepFunctionTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkPixelAccessTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkSinRegularizedHeavisideStepFunctionTest1.cxx.o -c /<>/Modules/Core/Common/test/itkSinRegularizedHeavisideStepFunctionTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkPointGeometryTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkPointGeometryTest.cxx.o -c /<>/Modules/Core/Common/test/itkPointGeometryTest.cxx In file included from /<>/Modules/Core/Common/test/itkPointGeometryTest.cxx:25: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkMersenneTwisterRandomVariateGeneratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkPixelAccessTest.cxx.o -c /<>/Modules/Core/Common/test/itkPixelAccessTest.cxx In file included from /<>/Modules/Core/Common/test/itkPixelAccessTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkNumberToStringTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkMersenneTwisterRandomVariateGeneratorTest.cxx.o -c /<>/Modules/Core/Common/test/itkMersenneTwisterRandomVariateGeneratorTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkTimeProbeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkNumberToStringTest.cxx.o -c /<>/Modules/Core/Common/test/itkNumberToStringTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkTimeProbeTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkTimeProbeTest.cxx.o -c /<>/Modules/Core/Common/test/itkTimeProbeTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkStdStreamStateSaveTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdVectorImageReadWriteTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdVectorImageReadWriteTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdVectorImageReadWriteTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/NRRD/test/CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdMetaDataTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkTimeProbeTest2.cxx.o -c /<>/Modules/Core/Common/test/itkTimeProbeTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkVersionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkStdStreamStateSaveTest.cxx.o -c /<>/Modules/Core/Common/test/itkStdStreamStateSaveTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/VNLSparseLUSolverTraitsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkVersionTest.cxx.o -c /<>/Modules/Core/Common/test/itkVersionTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/Common/test/CMakeFiles/ITKCommon1TestDriver.dir/itkFloatingPointExceptionsExtern.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/itkFloatingPointExceptionsExtern.cxx.o -c /<>/Modules/Core/Common/test/itkFloatingPointExceptionsExtern.cxx make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/TestKernel/src/CMakeFiles/itkTestDriver.dir/build.make Modules/Core/TestKernel/src/CMakeFiles/itkTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/TestKernel/src /<>/BUILD /<>/BUILD/Modules/Core/TestKernel/src /<>/BUILD/Modules/Core/TestKernel/src/CMakeFiles/itkTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target itkTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/TestKernel/src/CMakeFiles/itkTestDriver.dir/build.make Modules/Core/TestKernel/src/CMakeFiles/itkTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/TestKernel/src/CMakeFiles/itkTestDriver.dir/itkTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Core/Mesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKCommon1TestDriver.dir/VNLSparseLUSolverTraitsTest.cxx.o -c /<>/Modules/Core/Common/test/VNLSparseLUSolverTraitsTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/ITKCommon1TestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Common/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommon1TestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKCommon1TestDriver.dir/ITKCommon1TestDriver.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRegionExplicitTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkAbortProcessObjectTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkCommandObserverObjectTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkAdaptorComparisonTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkCovariantVectorGeometryTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkDataTypeTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkDecoratorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkExtractImage3Dto2DTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkExtractImageTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkFilterDispatchTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkFloodFilledSpatialFunctionTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkFloodFillIteratorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkGaussianDerivativeOperatorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkMapContainerTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkIteratorTests.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageReverseIteratorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageComputeOffsetAndIndexTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageDuplicatorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageIteratorsForwardBackwardTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageLinearIteratorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageAdaptorPipeLineTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImportContainerTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImportImageTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRandomIteratorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRandomIteratorTest2.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRandomNonRepeatingIteratorWithIndexTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRandomNonRepeatingIteratorWithIndexTest2.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageSliceIteratorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkTreeContainerTest2.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkRGBPixelTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkLightObjectTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkBoundingBoxTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkBoundaryConditionTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkByteSwapTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkSparseImageTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkSimpleFilterWatcherTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkSymmetricEllipsoidInteriorExteriorSpatialFunctionTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkSymmetricSecondRankTensorImageReadTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkSymmetricSecondRankTensorImageWriteReadTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkArray2DTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkFloatingPointExceptionsTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkFixedArrayTest2.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkNeighborhoodAlgorithmTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkPhasedArray3DSpecialCoordinatesImageTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkPriorityQueueTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkFileOutputWindowTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkSymmetricEigenAnalysisTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkSTLThreadTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkStreamingImageFilterTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkStreamingImageFilterTest2.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkStreamingImageFilterTest3.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkLoggerTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkDerivativeOperatorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkColorTableTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkNumericTraitsTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRegionTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkExceptionObjectTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkNeighborhoodOperatorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkNumericsTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkAnnulusOperatorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkLineIteratorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkGaussianSpatialFunctionTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkRealTimeClockTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkRealTimeIntervalTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkRealTimeStampTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkIntTypesTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkBSplineKernelFunctionTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkArrayTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageIteratorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageRegionIteratorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageScanlineIteratorTest1.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkCrossHelperTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageIteratorWithIndexTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkDirectoryTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkObjectStoreTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkObjectFactoryTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkEventObjectTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkMathCastWithRangeCheckTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkMathRoundProfileTest1.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkMathRoundTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkMathRoundTest2.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkModifiedTimeTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkMultipleLogOutputTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkVectorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkImageTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkConditionVariableTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkPointSetTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkBresenhamLineTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkSparseFieldLayerTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkDataObjectTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkAtanRegularizedHeavisideStepFunctionTest1.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkHashTableTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkHeavisideStepFunctionTest1.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkSinRegularizedHeavisideStepFunctionTest1.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkPixelAccessTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkPointGeometryTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkMersenneTwisterRandomVariateGeneratorTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkNumberToStringTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkTimeProbeTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkTimeProbeTest2.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkStdStreamStateSaveTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkVersionTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/VNLSparseLUSolverTraitsTest.cxx.o CMakeFiles/ITKCommon1TestDriver.dir/itkFloatingPointExceptionsExtern.cxx.o -o ../../../../bin/ITKCommon1TestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKCommon1TestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/build.make Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/LabelMap/test /<>/BUILD /<>/BUILD/Modules/Filtering/LabelMap/test /<>/BUILD/Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelMapTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/build.make Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/ITKLabelMapTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NRRD/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/NRRD -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdMetaDataTest.cxx.o -c /<>/Modules/IO/NRRD/test/itkNrrdMetaDataTest.cxx In file included from /<>/Modules/IO/NRRD/test/itkNrrdMetaDataTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/ITKIONRRDTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NRRD/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIONRRDTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIONRRDTestDriver.dir/ITKIONRRDTestDriver.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdImageIOTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdComplexImageReadTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdComplexImageReadWriteTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdCovariantVectorImageReadTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdCovariantVectorImageReadWriteTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdDiffusionTensor3DImageReadTensorDoubleWriteTensorDoubleTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdDiffusionTensor3DImageReadTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdDiffusionTensor3DImageReadWriteTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdImageReadWriteTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdRGBAImageReadWriteTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdRGBImageReadWriteTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdVectorImageReadTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdVectorImageReadWriteTest.cxx.o CMakeFiles/ITKIONRRDTestDriver.dir/itkNrrdMetaDataTest.cxx.o -o ../../../../bin/ITKIONRRDTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKIONRRDTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/build.make Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageCompose/test /<>/BUILD /<>/BUILD/Modules/Filtering/ImageCompose/test /<>/BUILD/Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageComposeTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/build.make Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/ITKImageComposeTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/TIFF/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOCompressionTest.cxx.o -c /<>/Modules/IO/TIFF/test/itkTIFFImageIOCompressionTest.cxx In file included from /<>/Modules/IO/TIFF/test/itkTIFFImageIOCompressionTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/ITKIOTIFFTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TIFF/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTIFFTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOTIFFTestDriver.dir/ITKIOTIFFTestDriver.cxx.o CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOTest.cxx.o CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOTest2.cxx.o CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOCompressionTest.cxx.o CMakeFiles/ITKIOTIFFTestDriver.dir/itkLargeTIFFImageWriteReadTest.cxx.o CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOInfoTest.cxx.o CMakeFiles/ITKIOTIFFTestDriver.dir/itkTIFFImageIOTestPalette.cxx.o -o ../../../../bin/ITKIOTIFFTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKIOTIFFTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/SpatialObjects/src/CMakeFiles/ITKIOSpatialObjects.dir/build.make Modules/IO/SpatialObjects/src/CMakeFiles/ITKIOSpatialObjects.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/SpatialObjects/src /<>/BUILD /<>/BUILD/Modules/IO/SpatialObjects/src /<>/BUILD/Modules/IO/SpatialObjects/src/CMakeFiles/ITKIOSpatialObjects.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSpatialObjects make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/SpatialObjects/src/CMakeFiles/ITKIOSpatialObjects.dir/build.make Modules/IO/SpatialObjects/src/CMakeFiles/ITKIOSpatialObjects.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/SpatialObjects/src/CMakeFiles/ITKIOSpatialObjects.dir/itkPolygonGroupSpatialObjectXMLFile.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/TestKernel/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTestKernelTestDriver.dir/ITKTestKernelTestDriver.cxx.o -c /<>/BUILD/Modules/Core/TestKernel/test/ITKTestKernelTestDriver.cxx In file included from /<>/BUILD/Modules/Core/TestKernel/test/ITKTestKernelTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/ITKTestKernelTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/TestKernel/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKTestKernelTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKTestKernelTestDriver.dir/ITKTestKernelTestDriver.cxx.o CMakeFiles/ITKTestKernelTestDriver.dir/itkTestingExtractSliceImageFilterTest.cxx.o CMakeFiles/ITKTestKernelTestDriver.dir/itkTestingStretchIntensityImageFilterTest.cxx.o -o ../../../../bin/ITKTestKernelTestDriver ../../../../lib/libITKSpatialObjects-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKTestKernelTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/build.make Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/SpatialObjects/test /<>/BUILD /<>/BUILD/Modules/Core/SpatialObjects/test /<>/BUILD/Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSpatialObjectsTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/build.make Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/ITKSpatialObjectsTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkTimeVaryingBSplineVelocityFieldPointSetRegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkTimeVaryingBSplineVelocityFieldPointSetRegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkTimeVaryingBSplineVelocityFieldPointSetRegistrationTest.cxx:19: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkTimeVaryingBSplineVelocityFieldImageRegistrationMethod.h:21: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Registration/RegistrationMethodsv4/test/CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkBSplineImageRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/SpatialObjects/src && /usr/bin/c++ -DITKIOSpatialObjects_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKIOSpatialObjects.dir/itkPolygonGroupSpatialObjectXMLFile.cxx.o -c /<>/Modules/IO/SpatialObjects/src/itkPolygonGroupSpatialObjectXMLFile.cxx In file included from /<>/Modules/IO/SpatialObjects/src/itkPolygonGroupSpatialObjectXMLFile.cxx:21: In file included from /<>/Modules/IO/SpatialObjects/include/itkPolygonGroupSpatialObjectXMLFile.h:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkPolygonGroupSpatialObject.h:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkGroupSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX shared library ../../../../lib/libITKIOSpatialObjects-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/SpatialObjects/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOSpatialObjects.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOSpatialObjects-4.12.so.1 -o ../../../../lib/libITKIOSpatialObjects-4.12.so.1 CMakeFiles/ITKIOSpatialObjects.dir/itkPolygonGroupSpatialObjectXMLFile.cxx.o ../../../../lib/libITKIOXML-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/SpatialObjects/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../../lib/libITKIOSpatialObjects-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKIOSpatialObjects make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjectsHeaderTest1.dir/build.make Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjectsHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 44%] Generating test/ITKSpatialObjectsHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKSpatialObjects /<>/Modules/Core/SpatialObjects /<>/BUILD/Modules/Core/SpatialObjects 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/SpatialObjects /<>/BUILD /<>/BUILD/Modules/Core/SpatialObjects /<>/BUILD/Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjectsHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSpatialObjectsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjectsHeaderTest1.dir/build.make Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjectsHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjectsHeaderTest1.dir/test/ITKSpatialObjectsHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsHeaderTest1.dir/test/ITKSpatialObjectsHeaderTest1.cxx.o -c /<>/BUILD/Modules/Core/SpatialObjects/test/ITKSpatialObjectsHeaderTest1.cxx In file included from /<>/BUILD/Modules/Core/SpatialObjects/test/ITKSpatialObjectsHeaderTest1.cxx:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.hxx:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../bin/ITKSpatialObjectsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKSpatialObjectsHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKSpatialObjectsHeaderTest1.dir/test/ITKSpatialObjectsHeaderTest1.cxx.o -o ../../../bin/ITKSpatialObjectsHeaderTest1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKSpatialObjectsHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjectsHeaderTest2.dir/build.make Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjectsHeaderTest2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 44%] Generating test/ITKSpatialObjectsHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKSpatialObjects /<>/Modules/Core/SpatialObjects /<>/BUILD/Modules/Core/SpatialObjects 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/SpatialObjects /<>/BUILD /<>/BUILD/Modules/Core/SpatialObjects /<>/BUILD/Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjectsHeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSpatialObjectsHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjectsHeaderTest2.dir/build.make Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjectsHeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjectsHeaderTest2.dir/test/ITKSpatialObjectsHeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsHeaderTest2.dir/test/ITKSpatialObjectsHeaderTest2.cxx.o -c /<>/BUILD/Modules/Core/SpatialObjects/test/ITKSpatialObjectsHeaderTest2.cxx In file included from /<>/BUILD/Modules/Core/SpatialObjects/test/ITKSpatialObjectsHeaderTest2.cxx:24: In file included from /<>/Modules/Core/SpatialObjects/include/itkLineSpatialObject.hxx:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkLineSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../bin/ITKSpatialObjectsHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKSpatialObjectsHeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKSpatialObjectsHeaderTest2.dir/test/ITKSpatialObjectsHeaderTest2.cxx.o -o ../../../bin/ITKSpatialObjectsHeaderTest2 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKSpatialObjectsHeaderTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/build.make Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageStatistics/test /<>/BUILD /<>/BUILD/Modules/Filtering/ImageStatistics/test /<>/BUILD/Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageStatisticsTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/build.make Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/ITKImageStatisticsTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/TestKernel/src && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/itkTestDriver.dir/itkTestDriver.cxx.o -c /<>/Modules/Core/TestKernel/src/itkTestDriver.cxx In file included from /<>/Modules/Core/TestKernel/src/itkTestDriver.cxx:29: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../../bin/itkTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/TestKernel/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/itkTestDriver.dir/itkTestDriver.cxx.o -o ../../../../bin/itkTestDriver ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target itkTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageStatistics/CMakeFiles/ITKImageStatisticsHeaderTest1.dir/build.make Modules/Filtering/ImageStatistics/CMakeFiles/ITKImageStatisticsHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 44%] Generating test/ITKImageStatisticsHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageStatistics /<>/Modules/Filtering/ImageStatistics /<>/BUILD/Modules/Filtering/ImageStatistics 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageStatistics /<>/BUILD /<>/BUILD/Modules/Filtering/ImageStatistics /<>/BUILD/Modules/Filtering/ImageStatistics/CMakeFiles/ITKImageStatisticsHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageStatisticsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageStatistics/CMakeFiles/ITKImageStatisticsHeaderTest1.dir/build.make Modules/Filtering/ImageStatistics/CMakeFiles/ITKImageStatisticsHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageStatistics/CMakeFiles/ITKImageStatisticsHeaderTest1.dir/test/ITKImageStatisticsHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/ITKLabelMapTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/LabelMap/test/ITKLabelMapTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/LabelMap/test/ITKLabelMapTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkAggregateLabelMapFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsHeaderTest1.dir/test/ITKImageStatisticsHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/ImageStatistics/test/ITKImageStatisticsHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/ImageStatistics/test/ITKImageStatisticsHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkLabelOverlapMeasuresImageFilter.hxx:21: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkLabelOverlapMeasuresImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Linking CXX executable ../../../bin/ITKImageStatisticsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageStatisticsHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageStatisticsHeaderTest1.dir/test/ITKImageStatisticsHeaderTest1.cxx.o -o ../../../bin/ITKImageStatisticsHeaderTest1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 44%] Built target ITKImageStatisticsHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/build.make Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Path/test /<>/BUILD /<>/BUILD/Modules/Filtering/Path/test /<>/BUILD/Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPathTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/build.make Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/ITKPathTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeTestDriver.dir/ITKImageComposeTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/ImageCompose/test/ITKImageComposeTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/ImageCompose/test/ITKImageComposeTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/itkCompose2DCovariantVectorImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeTestDriver.dir/itkCompose2DCovariantVectorImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompose/test/itkCompose2DCovariantVectorImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompose/test/itkCompose2DCovariantVectorImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageCompose/include/itkComposeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/itkCompose3DVectorImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/VTK/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIO2Test.cxx.o -c /<>/Modules/IO/VTK/test/itkVTKImageIO2Test.cxx In file included from /<>/Modules/IO/VTK/test/itkVTKImageIO2Test.cxx:18: In file included from /<>/Modules/IO/VTK/include/itkVTKImageIO.h:34: In file included from /<>/Modules/IO/ImageBase/include/itkStreamingImageIOBase.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/IO/VTK/test/CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/ITKSpatialObjectsTestDriver.cxx.o -c /<>/BUILD/Modules/Core/SpatialObjects/test/ITKSpatialObjectsTestDriver.cxx In file included from /<>/BUILD/Modules/Core/SpatialObjects/test/ITKSpatialObjectsTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 44%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkContourSpatialObjectPointTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkContourSpatialObjectPointTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkContourSpatialObjectPointTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkContourSpatialObjectPointTest.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkContourSpatialObjectPoint.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectPoint.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectToImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkAggregateLabelMapFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkAggregateLabelMapFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkAggregateLabelMapFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeKeepNObjectsLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeTestDriver.dir/itkCompose3DVectorImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompose/test/itkCompose3DVectorImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompose/test/itkCompose3DVectorImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageCompose/include/itkComposeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/itkCompose3DCovariantVectorImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeTestDriver.dir/itkCompose3DCovariantVectorImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompose/test/itkCompose3DCovariantVectorImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompose/test/itkCompose3DCovariantVectorImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageCompose/include/itkComposeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/itkCompose2DVectorImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkQuasiNewtonOptimizerv4RegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkQuasiNewtonOptimizerv4RegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkQuasiNewtonOptimizerv4RegistrationTest.cxx:27: In file included from /<>/Modules/Registration/Metricsv4/include/itkMeanSquaresImageToImageMetricv4.h:21: In file included from /<>/Modules/Registration/Metricsv4/include/itkImageToImageMetricv4.h:22: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/itkComposeRGBImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectToImageFilterTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkSpatialObjectToImageFilterTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkSpatialObjectToImageFilterTest.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkEllipseSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkLandmarkSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeTestDriver.dir/itkCompose2DVectorImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompose/test/itkCompose2DVectorImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompose/test/itkCompose2DVectorImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageCompose/include/itkComposeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/itkImageToVectorImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeKeepNObjectsLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkAttributeKeepNObjectsLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkAttributeKeepNObjectsLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeLabelObjectAccessorsTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/ITKImageStatisticsTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/ImageStatistics/test/ITKImageStatisticsTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/ImageStatistics/test/ITKImageStatisticsTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkStatisticsImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeTestDriver.dir/itkComposeRGBImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompose/test/itkComposeRGBImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompose/test/itkComposeRGBImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageCompose/include/itkComposeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/itkImageReadRealAndImaginaryWriteComplexTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkLandmarkSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkLandmarkSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkLandmarkSpatialObjectTest.cxx:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkLandmarkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkPolygonGroupSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkStatisticsImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkStatisticsImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkStatisticsImageFilterTest.cxx:23: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkStatisticsImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkLabelStatisticsImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeLabelObjectAccessorsTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkAttributeLabelObjectAccessorsTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkAttributeLabelObjectAccessorsTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeOpeningLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeTestDriver.dir/itkImageToVectorImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompose/test/itkImageToVectorImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompose/test/itkImageToVectorImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageCompose/include/itkComposeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/itkComposeRGBAImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeTestDriver.dir/itkImageReadRealAndImaginaryWriteComplexTest.cxx.o -c /<>/Modules/Filtering/ImageCompose/test/itkImageReadRealAndImaginaryWriteComplexTest.cxx In file included from /<>/Modules/Filtering/ImageCompose/test/itkImageReadRealAndImaginaryWriteComplexTest.cxx:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/itkJoinSeriesImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkPolygonGroupSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkPolygonGroupSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkPolygonGroupSpatialObjectTest.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkPolygonGroupSpatialObject.h:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkGroupSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkLabelStatisticsImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkLabelStatisticsImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkLabelStatisticsImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkLabelStatisticsImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkSumProjectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeTestDriver.dir/itkJoinSeriesImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompose/test/itkJoinSeriesImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompose/test/itkJoinSeriesImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageCompose/include/itkJoinSeriesImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/itkJoinSeriesImageFilterStreamingTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeTestDriver.dir/itkComposeRGBAImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompose/test/itkComposeRGBAImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompose/test/itkComposeRGBAImageFilterTest.cxx:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageCompose/test/CMakeFiles/ITKImageComposeTestDriver.dir/itkJoinImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeOpeningLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkAttributeOpeningLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkAttributeOpeningLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributePositionLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkImageSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkImageSpatialObjectTest.cxx:28: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectToImageStatisticsCalculatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/ITKPathTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/Path/test/ITKPathTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/Path/test/ITKPathTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkPathIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkSumProjectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkSumProjectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkSumProjectionImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkStandardDeviationProjectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkPathIteratorTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkPathIteratorTest.cxx In file included from /<>/Modules/Filtering/Path/test/itkPathIteratorTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkChainCodePathTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeTestDriver.dir/itkJoinImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompose/test/itkJoinImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompose/test/itkJoinImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageCompose/include/itkJoinImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkChainCodePath2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkChainCodePathTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkChainCodePathTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkHilbertPathTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkChainCodePath2DTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkChainCodePath2DTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkOrthogonallyCorrected2DParametricPathTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/ImageCompose/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageComposeTestDriver.dir/itkJoinSeriesImageFilterStreamingTest.cxx.o -c /<>/Modules/Filtering/ImageCompose/test/itkJoinSeriesImageFilterStreamingTest.cxx In file included from /<>/Modules/Filtering/ImageCompose/test/itkJoinSeriesImageFilterStreamingTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Linking CXX executable ../../../../bin/ITKImageComposeTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompose/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageComposeTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageComposeTestDriver.dir/ITKImageComposeTestDriver.cxx.o CMakeFiles/ITKImageComposeTestDriver.dir/itkCompose2DCovariantVectorImageFilterTest.cxx.o CMakeFiles/ITKImageComposeTestDriver.dir/itkCompose3DVectorImageFilterTest.cxx.o CMakeFiles/ITKImageComposeTestDriver.dir/itkCompose3DCovariantVectorImageFilterTest.cxx.o CMakeFiles/ITKImageComposeTestDriver.dir/itkCompose2DVectorImageFilterTest.cxx.o CMakeFiles/ITKImageComposeTestDriver.dir/itkComposeRGBImageFilterTest.cxx.o CMakeFiles/ITKImageComposeTestDriver.dir/itkImageToVectorImageFilterTest.cxx.o CMakeFiles/ITKImageComposeTestDriver.dir/itkImageReadRealAndImaginaryWriteComplexTest.cxx.o CMakeFiles/ITKImageComposeTestDriver.dir/itkComposeRGBAImageFilterTest.cxx.o CMakeFiles/ITKImageComposeTestDriver.dir/itkJoinSeriesImageFilterTest.cxx.o CMakeFiles/ITKImageComposeTestDriver.dir/itkJoinSeriesImageFilterStreamingTest.cxx.o CMakeFiles/ITKImageComposeTestDriver.dir/itkJoinImageFilterTest.cxx.o -o ../../../../bin/ITKImageComposeTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 45%] Built target ITKImageComposeTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/build.make Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageIntensity/test /<>/BUILD /<>/BUILD/Modules/Filtering/ImageIntensity/test /<>/BUILD/Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageIntensityTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/build.make Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkOrthogonallyCorrected2DParametricPathTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkOrthogonallyCorrected2DParametricPathTest.cxx In file included from /<>/Modules/Filtering/Path/test/itkOrthogonallyCorrected2DParametricPathTest.cxx:20: In file included from /<>/Modules/Filtering/Path/include/itkOrthogonallyCorrected2DParametricPath.h:21: In file included from /<>/Modules/Filtering/Path/include/itkParametricPath.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/ITKImageIntensityTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkPathToImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkHilbertPathTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkHilbertPathTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkPathToChainCodePathFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkStandardDeviationProjectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkStandardDeviationProjectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkStandardDeviationProjectionImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImageMomentsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkPathToChainCodePathFilterTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkPathToChainCodePathFilterTest.cxx In file included from /<>/Modules/Filtering/Path/test/itkPathToChainCodePathFilterTest.cxx:20: In file included from /<>/Modules/Filtering/Path/include/itkPolyLineParametricPath.h:21: In file included from /<>/Modules/Filtering/Path/include/itkParametricPath.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkFourierSeriesPathTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkPathToImageFilterTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkPathToImageFilterTest.cxx In file included from /<>/Modules/Filtering/Path/test/itkPathToImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Path/include/itkPolyLineParametricPath.h:21: In file included from /<>/Modules/Filtering/Path/include/itkParametricPath.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkPathFunctionsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkFourierSeriesPathTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkFourierSeriesPathTest.cxx In file included from /<>/Modules/Filtering/Path/test/itkFourierSeriesPathTest.cxx:20: In file included from /<>/Modules/Filtering/Path/include/itkFourierSeriesPath.h:21: In file included from /<>/Modules/Filtering/Path/include/itkParametricPath.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkPolyLineParametricPathTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributePositionLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkAttributePositionLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkAttributePositionLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeRelabelLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkPolyLineParametricPathTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkPolyLineParametricPathTest.cxx In file included from /<>/Modules/Filtering/Path/test/itkPolyLineParametricPathTest.cxx:20: In file included from /<>/Modules/Filtering/Path/include/itkPolyLineParametricPath.h:21: In file included from /<>/Modules/Filtering/Path/include/itkParametricPath.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkChainCodeToFourierSeriesPathFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectToImageStatisticsCalculatorTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkSpatialObjectToImageStatisticsCalculatorTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkSpatialObjectToImageStatisticsCalculatorTest.cxx:20: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectToImageStatisticsCalculator.h:22: In file included from /<>/Modules/Core/Common/include/itkFloodFilledSpatialFunctionConditionalConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkFloodFilledFunctionConditionalConstIterator.h:26: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageMaskSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImageMomentsTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkImageMomentsTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkImageMomentsTest.cxx:19: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkImageMomentsCalculator.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkPathFunctionsTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkPathFunctionsTest.cxx In file included from /<>/Modules/Filtering/Path/test/itkPathFunctionsTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImageToHistogramFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkExtractOrthogonalSwath2DImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkChainCodeToFourierSeriesPathFilterTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkChainCodeToFourierSeriesPathFilterTest.cxx In file included from /<>/Modules/Filtering/Path/test/itkChainCodeToFourierSeriesPathFilterTest.cxx:20: In file included from /<>/Modules/Filtering/Path/include/itkPolyLineParametricPath.h:21: In file included from /<>/Modules/Filtering/Path/include/itkParametricPath.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Path/test/CMakeFiles/ITKPathTestDriver.dir/itkOrthogonalSwath2DPathFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkBSplineImageRegistrationTest.cxx.o -c /<>/Modules/Registration/RegistrationMethodsv4/test/itkBSplineImageRegistrationTest.cxx In file included from /<>/Modules/Registration/RegistrationMethodsv4/test/itkBSplineImageRegistrationTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Linking CXX executable ../../../../bin/ITKRegistrationMethodsv4TestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImageToHistogramFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkImageToHistogramFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkImageToHistogramFilterTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToHistogramFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImageToHistogramFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkExtractOrthogonalSwath2DImageFilterTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkExtractOrthogonalSwath2DImageFilterTest.cxx In file included from /<>/Modules/Filtering/Path/test/itkExtractOrthogonalSwath2DImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Path/include/itkPolyLineParametricPath.h:21: In file included from /<>/Modules/Filtering/Path/include/itkParametricPath.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageMaskSpatialObjectTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageMaskSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkImageMaskSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkImageMaskSpatialObjectTest.cxx:28: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageMaskSpatialObjectTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/RegistrationMethodsv4/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/ITKRegistrationMethodsv4TestDriver.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkImageRegistrationSamplingTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTest2.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTest3.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTest4.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimpleImageRegistrationTestWithMaskAndSampling.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSimplePointSetRegistrationTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkExponentialImageRegistrationTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkBSplineExponentialImageRegistrationTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkTimeVaryingBSplineVelocityFieldImageRegistrationTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkTimeVaryingVelocityFieldImageRegistrationTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSyNImageRegistrationTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkSyNPointSetRegistrationTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkBSplineSyNImageRegistrationTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkBSplineSyNPointSetRegistrationTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkTimeVaryingBSplineVelocityFieldPointSetRegistrationTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkQuasiNewtonOptimizerv4RegistrationTest.cxx.o CMakeFiles/ITKRegistrationMethodsv4TestDriver.dir/itkBSplineImageRegistrationTest.cxx.o -o ../../../../bin/ITKRegistrationMethodsv4TestDriver ../../../../lib/libITKOptimizersv4-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 45%] Built target ITKRegistrationMethodsv4TestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensityHeaderTest1.dir/build.make Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensityHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 45%] Generating test/ITKImageIntensityHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageIntensity /<>/Modules/Filtering/ImageIntensity /<>/BUILD/Modules/Filtering/ImageIntensity 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageIntensity /<>/BUILD /<>/BUILD/Modules/Filtering/ImageIntensity /<>/BUILD/Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensityHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageIntensityHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensityHeaderTest1.dir/build.make Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensityHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensityHeaderTest1.dir/test/ITKImageIntensityHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeRelabelLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkAttributeRelabelLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkAttributeRelabelLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeUniqueLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityHeaderTest1.dir/test/ITKImageIntensityHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/ImageIntensity/test/ITKImageIntensityHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/ImageIntensity/test/ITKImageIntensityHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkComplexToRealImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Linking CXX executable ../../../bin/ITKImageIntensityHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageIntensityHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageIntensityHeaderTest1.dir/test/ITKImageIntensityHeaderTest1.cxx.o -o ../../../bin/ITKImageIntensityHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 45%] Built target ITKImageIntensityHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensityHeaderTest2.dir/build.make Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensityHeaderTest2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 45%] Generating test/ITKImageIntensityHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageIntensity /<>/Modules/Filtering/ImageIntensity /<>/BUILD/Modules/Filtering/ImageIntensity 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageIntensity /<>/BUILD /<>/BUILD/Modules/Filtering/ImageIntensity /<>/BUILD/Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensityHeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageIntensityHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensityHeaderTest2.dir/build.make Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensityHeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensityHeaderTest2.dir/test/ITKImageIntensityHeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityHeaderTest2.dir/test/ITKImageIntensityHeaderTest2.cxx.o -c /<>/BUILD/Modules/Filtering/ImageIntensity/test/ITKImageIntensityHeaderTest2.cxx In file included from /<>/BUILD/Modules/Filtering/ImageIntensity/test/ITKImageIntensityHeaderTest2.cxx:23: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkNotImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Linking CXX executable ../../../bin/ITKImageIntensityHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageIntensityHeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageIntensityHeaderTest2.dir/test/ITKImageIntensityHeaderTest2.cxx.o -o ../../../bin/ITKImageIntensityHeaderTest2 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 45%] Built target ITKImageIntensityHeaderTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/build.make Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Thresholding/test /<>/BUILD /<>/BUILD/Modules/Filtering/Thresholding/test /<>/BUILD/Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKThresholdingTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/build.make Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/ITKThresholdingTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPathTestDriver.dir/itkOrthogonalSwath2DPathFilterTest.cxx.o -c /<>/Modules/Filtering/Path/test/itkOrthogonalSwath2DPathFilterTest.cxx In file included from /<>/Modules/Filtering/Path/test/itkOrthogonalSwath2DPathFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Path/include/itkPolyLineParametricPath.h:21: In file included from /<>/Modules/Filtering/Path/include/itkParametricPath.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Linking CXX executable ../../../../bin/ITKPathTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Path/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKPathTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKPathTestDriver.dir/ITKPathTestDriver.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkPathIteratorTest.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkChainCodePathTest.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkChainCodePath2DTest.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkHilbertPathTest.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkOrthogonallyCorrected2DParametricPathTest.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkPathToImageFilterTest.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkPathToChainCodePathFilterTest.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkFourierSeriesPathTest.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkPathFunctionsTest.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkPolyLineParametricPathTest.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkChainCodeToFourierSeriesPathFilterTest.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkExtractOrthogonalSwath2DImageFilterTest.cxx.o CMakeFiles/ITKPathTestDriver.dir/itkOrthogonalSwath2DPathFilterTest.cxx.o -o ../../../../bin/ITKPathTestDriver ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 45%] Built target ITKPathTestDriver make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkAutoCropLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageMaskSpatialObjectTest3.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkImageMaskSpatialObjectTest3.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkImageMaskSpatialObjectTest3.cxx:33: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageMaskSpatialObjectTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImageToHistogramFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkImageToHistogramFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkImageToHistogramFilterTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToHistogramFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImageToHistogramFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageMaskSpatialObjectTest2.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkImageMaskSpatialObjectTest2.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkImageMaskSpatialObjectTest2.cxx:33: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkBlobSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/VTK/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIOTest.cxx.o -c /<>/Modules/IO/VTK/test/itkVTKImageIOTest.cxx In file included from /<>/Modules/IO/VTK/test/itkVTKImageIOTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/IO/VTK/test/CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIO2Test2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkBlobSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkBlobSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkBlobSpatialObjectTest.cxx:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkBlobSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkContourSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImageToHistogramFilterTest3.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkImageToHistogramFilterTest3.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkImageToHistogramFilterTest3.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkScalarImageToHistogramGenerator.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMinimumMaximumImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkAutoCropLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkAutoCropLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkAutoCropLabelMapFilterTest1.cxx:28: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkAutoCropLabelMapFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkContourSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkContourSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkContourSpatialObjectTest.cxx:18: In file included from /<>/Modules/Core/SpatialObjects/include/itkContourSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSceneSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/VTK/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIO2Test2.cxx.o -c /<>/Modules/IO/VTK/test/itkVTKImageIO2Test2.cxx In file included from /<>/Modules/IO/VTK/test/itkVTKImageIO2Test2.cxx:18: In file included from /<>/Modules/IO/VTK/include/itkVTKImageIO.h:34: In file included from /<>/Modules/IO/ImageBase/include/itkStreamingImageIOBase.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMinimumMaximumImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkMinimumMaximumImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkMinimumMaximumImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkMinimumMaximumImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/IO/VTK/test/CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIOTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImagePCAShapeModelEstimatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageMaskSpatialObjectTest4.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkImageMaskSpatialObjectTest4.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkImageMaskSpatialObjectTest4.cxx:32: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectToImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSurfaceSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/ITKImageIntensityTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/ImageIntensity/test/ITKImageIntensityTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/ImageIntensity/test/ITKImageIntensityTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkCosImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImagePCAShapeModelEstimatorTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkImagePCAShapeModelEstimatorTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkImagePCAShapeModelEstimatorTest.cxx:23: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkImagePCAShapeModelEstimator.h:30: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMaximumProjectionImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeUniqueLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkAttributeUniqueLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkAttributeUniqueLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryFillholeImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSceneSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkSceneSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkSceneSpatialObjectTest.cxx:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSceneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkMetaArrowConverterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/VTK/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIOTest2.cxx.o -c /<>/Modules/IO/VTK/test/itkVTKImageIOTest2.cxx In file included from /<>/Modules/IO/VTK/test/itkVTKImageIOTest2.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/IO/VTK/test/CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIOStreamTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkCosImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkCosImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkCosImageFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkCosImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkExpImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSurfaceSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkSurfaceSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkSurfaceSpatialObjectTest.cxx:24: In file included from /<>/Modules/Core/SpatialObjects/include/itkSurfaceSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkMetaGaussianConverterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkAutoCropLabelMapFilterTest2.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkAutoCropLabelMapFilterTest2.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkAutoCropLabelMapFilterTest2.cxx:28: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryGrindPeakImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkMetaArrowConverterTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkMetaArrowConverterTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkMetaArrowConverterTest.cxx:18: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaArrowConverter.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaConverterBase.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkTubeSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkExpImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkExpImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkExpImageFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkExpImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorRescaleIntensityImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMaximumProjectionImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkMaximumProjectionImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkMaximumProjectionImageFilterTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMaximumProjectionImageFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkMetaGaussianConverterTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkMetaGaussianConverterTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkMetaGaussianConverterTest.cxx:20: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaGaussianConverter.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaConverterBase.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectToPointSetFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorRescaleIntensityImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkVectorRescaleIntensityImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkVectorRescaleIntensityImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkVectorRescaleIntensityImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkTernaryMagnitudeSquaredImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkTubeSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkTubeSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkTubeSpatialObjectTest.cxx:24: In file included from /<>/Modules/Core/SpatialObjects/include/itkTubeSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectDuplicatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMaximumProjectionImageFilterTest3.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkMaximumProjectionImageFilterTest3.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkMaximumProjectionImageFilterTest3.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMinimumProjectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkTernaryMagnitudeSquaredImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkTernaryMagnitudeSquaredImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkTernaryMagnitudeSquaredImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkTernaryMagnitudeSquaredImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkTernaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkTernaryOperatorImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/ITKThresholdingTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/Thresholding/test/ITKThresholdingTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/Thresholding/test/ITKThresholdingTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkBinaryThresholdImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkTernaryOperatorImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkTernaryOperatorImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkTernaryOperatorImageFilterTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkMinimumImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryFillholeImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryFillholeImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryFillholeImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryImageToLabelMapFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMinimumProjectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkMinimumProjectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkMinimumProjectionImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMeanProjectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectToPointSetFilterTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkSpatialObjectToPointSetFilterTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkSpatialObjectToPointSetFilterTest.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkTubeSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkPlaneSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryGrindPeakImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryGrindPeakImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryGrindPeakImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkLog10ImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMinimumImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkMinimumImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkMinimumImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkMinimumImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorIndexSelectionCastImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectDuplicatorTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkSpatialObjectDuplicatorTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkSpatialObjectDuplicatorTest.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectDuplicator.h:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkCylinderSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkCylinderSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkCylinderSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkCylinderSpatialObjectTest.cxx:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkCylinderSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectTreeContainerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkBinaryThresholdImageFilterTest2.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkBinaryThresholdImageFilterTest2.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkBinaryThresholdImageFilterTest2.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkBinaryThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkLog10ImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkLog10ImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkLog10ImageFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkLog10ImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkInvertIntensityImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkPlaneSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkPlaneSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkPlaneSpatialObjectTest.cxx:24: In file included from /<>/Modules/Core/SpatialObjects/include/itkPlaneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkAffineGeometryFrameTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMeanProjectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkMeanProjectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkMeanProjectionImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImagePCADecompositionCalculatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorIndexSelectionCastImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkVectorIndexSelectionCastImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkVectorIndexSelectionCastImageFilterTest.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkSymmetricEigenAnalysisImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkBinaryThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkBinaryThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkBinaryThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkBinaryThresholdProjectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectTreeContainerTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkSpatialObjectTreeContainerTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkSpatialObjectTreeContainerTest.cxx:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkGroupSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkBoxSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImagePCADecompositionCalculatorTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkImagePCADecompositionCalculatorTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkImagePCADecompositionCalculatorTest.cxx:23: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkImagePCADecompositionCalculator.h:22: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkImagePCAShapeModelEstimator.h:30: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMaximumProjectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkAffineGeometryFrameTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkAffineGeometryFrameTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkAffineGeometryFrameTest.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectTreeContainer.h:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectTreeNode.h:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkGaussianSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkInvertIntensityImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkInvertIntensityImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkInvertIntensityImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkEdgePotentialImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkSymmetricEigenAnalysisImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkSymmetricEigenAnalysisImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkSymmetricEigenAnalysisImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkCastImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkComplexToModulusFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkBinaryThresholdProjectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkBinaryThresholdProjectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkBinaryThresholdProjectionImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkBinaryThresholdSpatialFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkEdgePotentialImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkEdgePotentialImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkEdgePotentialImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkEdgePotentialImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkAddImageAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkBinaryThresholdSpatialFunctionTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkBinaryThresholdSpatialFunctionTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkBinaryThresholdSpatialFunctionTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkBinaryThresholdSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkHuangThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkGaussianSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkGaussianSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkGaussianSpatialObjectTest.cxx:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkGaussianSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkEllipseSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkPolygonSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkBoxSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkBoxSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkBoxSpatialObjectTest.cxx:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkEllipseSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMaximumProjectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkMaximumProjectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkMaximumProjectionImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMedianProjectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkComplexToModulusFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkComplexToModulusFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkComplexToModulusFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkComplexToModulusImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkAndImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAddImageAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkAddImageAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkAddImageAdaptorTest.cxx:19: In file included from /<>/Modules/Core/ImageAdaptors/include/itkAddImageAdaptor.h:21: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkAdaptImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAndImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkAndImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkAndImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAndImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkLogImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkPolygonSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkPolygonSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkPolygonSpatialObjectTest.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkPolygonSpatialObject.h:20: In file included from /<>/Modules/Core/SpatialObjects/include/itkBlobSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkMeshSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAdaptImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkAdaptImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkAdaptImageFilterTest2.cxx:34: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAdaptImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkNotImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkEllipseSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkEllipseSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkEllipseSpatialObjectTest.cxx:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkEllipseSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkArrowSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMedianProjectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkMedianProjectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkMedianProjectionImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToEntropyImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNotImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkNotImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkNotImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkNotImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkImageAdaptorNthElementTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkLogImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkLogImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkLogImageFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkLogImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkConstrainedValueAdditionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkHuangThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkHuangThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkHuangThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkHuangThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkIntermodesThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkImageAdaptorNthElementTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkImageAdaptorNthElementTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkImageAdaptorNthElementTest.cxx:28: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkAtanImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkMeshSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkMeshSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkMeshSpatialObjectTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkDefaultDynamicMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkLineSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkConstrainedValueAdditionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkConstrainedValueAdditionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkConstrainedValueAdditionImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkConstrainedValueAdditionImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkMaskNegatedImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkArrowSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkArrowSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkArrowSpatialObjectTest.cxx:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkArrowSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectTreeContainerIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAtanImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkAtanImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkAtanImageFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAtanImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Core/SpatialObjects/test/CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkNewMetaObjectTypeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToEntropyImageFilterTest1.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToEntropyImageFilterTest1.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToEntropyImageFilterTest1.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkScalarImageToHistogramGenerator.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToEntropyImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMaskNegatedImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkMaskNegatedImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkMaskNegatedImageFilterTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkAddImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectTreeContainerIteratorTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkSpatialObjectTreeContainerIteratorTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkSpatialObjectTreeContainerIteratorTest.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectTreeContainer.h:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectTreeNode.h:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkAddImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkLineSpatialObjectTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkLineSpatialObjectTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkLineSpatialObjectTest.cxx:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkLineSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkAddImageFilterFrameTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAddImageFilterFrameTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkAddImageFilterFrameTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkAddImageFilterFrameTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAddImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkPowImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkIntermodesThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkIntermodesThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkIntermodesThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkIntermodesThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkIsoDataThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAddImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkAddImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkAddImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAddImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkMultiplyImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMultiplyImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkMultiplyImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkMultiplyImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkMultiplyImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkWeightedAddImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAddImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkAddImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkAddImageFilterTest2.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkRescaleIntensityImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToEntropyImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToEntropyImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToEntropyImageFilterTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToHistogramFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToIntensityImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/VTK/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIOStreamTest.cxx.o -c /<>/Modules/IO/VTK/test/itkVTKImageIOStreamTest.cxx In file included from /<>/Modules/IO/VTK/test/itkVTKImageIOStreamTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/IO/VTK/test/CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIOFileReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkWeightedAddImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkWeightedAddImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkWeightedAddImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkWeightedAddImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 45%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkNormalizeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkPowImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkPowImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkPowImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkPowImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkNaryAddImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkRescaleIntensityImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkRescaleIntensityImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkRescaleIntensityImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkRescaleIntensityImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkShiftScaleImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkIsoDataThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkIsoDataThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkIsoDataThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkIsoDataThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkKittlerIllingworthThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNaryAddImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkNaryAddImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkNaryAddImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkNaryAddImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkNaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkComplexToPhaseFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkShiftScaleImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkShiftScaleImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkShiftScaleImageFilterTest.cxx:22: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkShiftScaleImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkIntensityWindowingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNormalizeImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkNormalizeImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkNormalizeImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkNormalizeImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkStatisticsImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkTernaryMagnitudeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/VTK/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIOFileReadTest.cxx.o -c /<>/Modules/IO/VTK/test/itkVTKImageIOFileReadTest.cxx In file included from /<>/Modules/IO/VTK/test/itkVTKImageIOFileReadTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Linking CXX executable ../../../../bin/ITKIOVTKTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkNewMetaObjectTypeTest.cxx.o -c /<>/Modules/Core/SpatialObjects/test/itkNewMetaObjectTypeTest.cxx In file included from /<>/Modules/Core/SpatialObjects/test/itkNewMetaObjectTypeTest.cxx:18: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaSceneConverter.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSceneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Linking CXX executable ../../../../bin/ITKSpatialObjectsTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/VTK/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOVTKTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOVTKTestDriver.dir/ITKIOVTKTestDriver.cxx.o CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIO2Test.cxx.o CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIOTest.cxx.o CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIO2Test2.cxx.o CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIOTest2.cxx.o CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIOStreamTest.cxx.o CMakeFiles/ITKIOVTKTestDriver.dir/itkVTKImageIOFileReadTest.cxx.o -o ../../../../bin/ITKIOVTKTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 46%] Built target ITKIOVTKTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Thresholding/CMakeFiles/ITKThresholdingHeaderTest1.dir/build.make Modules/Filtering/Thresholding/CMakeFiles/ITKThresholdingHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 46%] Generating test/ITKThresholdingHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKThresholding /<>/Modules/Filtering/Thresholding /<>/BUILD/Modules/Filtering/Thresholding 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Thresholding /<>/BUILD /<>/BUILD/Modules/Filtering/Thresholding /<>/BUILD/Modules/Filtering/Thresholding/CMakeFiles/ITKThresholdingHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKThresholdingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Thresholding/CMakeFiles/ITKThresholdingHeaderTest1.dir/build.make Modules/Filtering/Thresholding/CMakeFiles/ITKThresholdingHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/CMakeFiles/ITKThresholdingHeaderTest1.dir/test/ITKThresholdingHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/SpatialObjects/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKSpatialObjectsTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKSpatialObjectsTestDriver.dir/ITKSpatialObjectsTestDriver.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkContourSpatialObjectPointTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectToImageFilterTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkLandmarkSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkPolygonGroupSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectToImageStatisticsCalculatorTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageMaskSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageMaskSpatialObjectTest2.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageMaskSpatialObjectTest3.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkImageMaskSpatialObjectTest4.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkBlobSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkContourSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSceneSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSurfaceSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkMetaArrowConverterTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkMetaGaussianConverterTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkTubeSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectToPointSetFilterTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectDuplicatorTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkPlaneSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkCylinderSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectTreeContainerTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkAffineGeometryFrameTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkBoxSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkGaussianSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkPolygonSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkEllipseSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkMeshSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkArrowSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkLineSpatialObjectTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkSpatialObjectTreeContainerIteratorTest.cxx.o CMakeFiles/ITKSpatialObjectsTestDriver.dir/itkNewMetaObjectTypeTest.cxx.o -o ../../../../bin/ITKSpatialObjectsTestDriver ../../../../lib/libITKSpatialObjects-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 46%] Built target ITKSpatialObjectsTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/ConnectedComponents/CMakeFiles/ITKConnectedComponentsHeaderTest1.dir/build.make Modules/Segmentation/ConnectedComponents/CMakeFiles/ITKConnectedComponentsHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 46%] Generating test/ITKConnectedComponentsHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKConnectedComponents /<>/Modules/Segmentation/ConnectedComponents /<>/BUILD/Modules/Segmentation/ConnectedComponents 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/ConnectedComponents /<>/BUILD /<>/BUILD/Modules/Segmentation/ConnectedComponents /<>/BUILD/Modules/Segmentation/ConnectedComponents/CMakeFiles/ITKConnectedComponentsHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKConnectedComponentsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/ConnectedComponents/CMakeFiles/ITKConnectedComponentsHeaderTest1.dir/build.make Modules/Segmentation/ConnectedComponents/CMakeFiles/ITKConnectedComponentsHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Segmentation/ConnectedComponents/CMakeFiles/ITKConnectedComponentsHeaderTest1.dir/test/ITKConnectedComponentsHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingHeaderTest1.dir/test/ITKThresholdingHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/Thresholding/test/ITKThresholdingHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/Thresholding/test/ITKThresholdingHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/Thresholding/include/itkOtsuMultipleThresholdsCalculator.hxx:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkOtsuMultipleThresholdsCalculator.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Linking CXX executable ../../../bin/ITKThresholdingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToIntensityImageFilterTest1.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToIntensityImageFilterTest1.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToIntensityImageFilterTest1.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkScalarImageToHistogramGenerator.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToIntensityImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKThresholdingHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKThresholdingHeaderTest1.dir/test/ITKThresholdingHeaderTest1.cxx.o -o ../../../bin/ITKThresholdingHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 46%] Built target ITKThresholdingHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/build.make Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/ConnectedComponents/test /<>/BUILD /<>/BUILD/Modules/Segmentation/ConnectedComponents/test /<>/BUILD/Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKConnectedComponentsTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/build.make Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/ITKConnectedComponentsTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConnectedComponentsHeaderTest1.dir/test/ITKConnectedComponentsHeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/ConnectedComponents/test/ITKConnectedComponentsHeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/ConnectedComponents/test/ITKConnectedComponentsHeaderTest1.cxx:23: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkRelabelComponentImageFilter.hxx:21: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkRelabelComponentImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Linking CXX executable ../../../bin/ITKConnectedComponentsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkComplexToPhaseFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkComplexToPhaseFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkComplexToPhaseFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkComplexToPhaseImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKConnectedComponentsHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKConnectedComponentsHeaderTest1.dir/test/ITKConnectedComponentsHeaderTest1.cxx.o -o ../../../bin/ITKConnectedComponentsHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkAbsImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 46%] Built target ITKConnectedComponentsHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyHeaderTest2.dir/build.make Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyHeaderTest2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 46%] Generating test/ITKMathematicalMorphologyHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKMathematicalMorphology /<>/Modules/Filtering/MathematicalMorphology /<>/BUILD/Modules/Filtering/MathematicalMorphology 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkIntensityWindowingImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkIntensityWindowingImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkIntensityWindowingImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkIntensityWindowingImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkMaximumImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/MathematicalMorphology /<>/BUILD /<>/BUILD/Modules/Filtering/MathematicalMorphology /<>/BUILD/Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyHeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMathematicalMorphologyHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyHeaderTest2.dir/build.make Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyHeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyHeaderTest2.dir/test/ITKMathematicalMorphologyHeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkTernaryMagnitudeImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkTernaryMagnitudeImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkTernaryMagnitudeImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryImageToLabelMapFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryImageToLabelMapFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryImageToLabelMapFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryImageToLabelMapFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkRelabelComponentImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyHeaderTest2.dir/test/ITKMathematicalMorphologyHeaderTest2.cxx.o -c /<>/BUILD/Modules/Filtering/MathematicalMorphology/test/ITKMathematicalMorphologyHeaderTest2.cxx In file included from /<>/BUILD/Modules/Filtering/MathematicalMorphology/test/ITKMathematicalMorphologyHeaderTest2.cxx:23: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkValuedRegionalMinimaImageFilter.h:21: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkValuedRegionalExtremaImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Linking CXX executable ../../../bin/ITKMathematicalMorphologyHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMathematicalMorphologyHeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKMathematicalMorphologyHeaderTest2.dir/test/ITKMathematicalMorphologyHeaderTest2.cxx.o -o ../../../bin/ITKMathematicalMorphologyHeaderTest2 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 46%] Built target ITKMathematicalMorphologyHeaderTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyHeaderTest1.dir/build.make Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 46%] Generating test/ITKMathematicalMorphologyHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKMathematicalMorphology /<>/Modules/Filtering/MathematicalMorphology /<>/BUILD/Modules/Filtering/MathematicalMorphology 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/MathematicalMorphology /<>/BUILD /<>/BUILD/Modules/Filtering/MathematicalMorphology /<>/BUILD/Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMathematicalMorphologyHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyHeaderTest1.dir/build.make Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyHeaderTest1.dir/test/ITKMathematicalMorphologyHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyHeaderTest1.dir/test/ITKMathematicalMorphologyHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/MathematicalMorphology/test/ITKMathematicalMorphologyHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/MathematicalMorphology/test/ITKMathematicalMorphologyHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkAnchorCloseImageFilter.h:21: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkAnchorOpenCloseImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Linking CXX executable ../../../bin/ITKMathematicalMorphologyHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMaximumImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkMaximumImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkMaximumImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkMaximumImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkBinaryMagnitudeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMathematicalMorphologyHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKMathematicalMorphologyHeaderTest1.dir/test/ITKMathematicalMorphologyHeaderTest1.cxx.o -o ../../../bin/ITKMathematicalMorphologyHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 46%] Built target ITKMathematicalMorphologyHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/build.make Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/MathematicalMorphology/test /<>/BUILD /<>/BUILD/Modules/Filtering/MathematicalMorphology/test /<>/BUILD/Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMathematicalMorphologyTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/build.make Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/ITKMathematicalMorphologyTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAbsImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkAbsImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkAbsImageFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAbsImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkMatrixIndexSelectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkKittlerIllingworthThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkKittlerIllingworthThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkKittlerIllingworthThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkKittlerIllingworthThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkLiThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkBinaryMagnitudeImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkBinaryMagnitudeImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkBinaryMagnitudeImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkBinaryMagnitudeImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkSquareImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMatrixIndexSelectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkMatrixIndexSelectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkMatrixIndexSelectionImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkMatrixIndexSelectionImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkRGBToVectorAdaptImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToIntensityImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToIntensityImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToIntensityImageFilterTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToHistogramFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToLogProbabilityImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkSquareImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkSquareImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkSquareImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkSquareImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkComplexToRealFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryImageToLabelMapFilterTest2.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryImageToLabelMapFilterTest2.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryImageToLabelMapFilterTest2.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryImageToShapeLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkRGBToVectorAdaptImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkRGBToVectorAdaptImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkRGBToVectorAdaptImageFilterTest.cxx:32: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAdaptImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkNaryMaximumImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkComplexToRealFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkComplexToRealFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkComplexToRealFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkComplexToRealImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkAtan2ImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNaryMaximumImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkNaryMaximumImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkNaryMaximumImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkNaryMaximumImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkNaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkSqrtImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkRelabelComponentImageFilterTest.cxx.o -c /<>/Modules/Segmentation/ConnectedComponents/test/itkRelabelComponentImageFilterTest.cxx In file included from /<>/Modules/Segmentation/ConnectedComponents/test/itkRelabelComponentImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkRelabelComponentImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkHardConnectedComponentImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkLiThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkLiThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkLiThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkLiThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkMaximumEntropyThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAtan2ImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkAtan2ImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkAtan2ImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAtan2ImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkAsinImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkSqrtImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkSqrtImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkSqrtImageFilterAndAdaptorTest.cxx:20: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkSqrtImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkMaskImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToLogProbabilityImageFilterTest1.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToLogProbabilityImageFilterTest1.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToLogProbabilityImageFilterTest1.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkScalarImageToHistogramGenerator.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToLogProbabilityImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkHardConnectedComponentImageFilterTest.cxx.o -c /<>/Modules/Segmentation/ConnectedComponents/test/itkHardConnectedComponentImageFilterTest.cxx In file included from /<>/Modules/Segmentation/ConnectedComponents/test/itkHardConnectedComponentImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkHardConnectedComponentImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkConnectedComponentImageFilterTestRGB.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAsinImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkAsinImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkAsinImageFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAsinImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkHistogramMatchingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMaskImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkMaskImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkMaskImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkVectorImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkAcosImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryImageToShapeLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryImageToShapeLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryImageToShapeLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryImageToStatisticsLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkMaximumEntropyThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkMaximumEntropyThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkMaximumEntropyThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkMaximumEntropyThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkMomentsThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAcosImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkAcosImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkAcosImageFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAcosImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkExpNegativeImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToLogProbabilityImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToLogProbabilityImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToLogProbabilityImageFilterTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToHistogramFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToProbabilityImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConnectedComponentsTestDriver.dir/ITKConnectedComponentsTestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/ConnectedComponents/test/ITKConnectedComponentsTestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/ConnectedComponents/test/ITKConnectedComponentsTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkConnectedComponentImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkExpNegativeImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkExpNegativeImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkExpNegativeImageFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkExpNegativeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkTanImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkConnectedComponentImageFilterTestRGB.cxx.o -c /<>/Modules/Segmentation/ConnectedComponents/test/itkConnectedComponentImageFilterTestRGB.cxx In file included from /<>/Modules/Segmentation/ConnectedComponents/test/itkConnectedComponentImageFilterTestRGB.cxx:19: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkConnectedComponentImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkConnectedComponentImageFilterBackgroundTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkTanImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkTanImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkTanImageFilterAndAdaptorTest.cxx:20: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkTanImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkSigmoidImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/ITKMathematicalMorphologyTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/MathematicalMorphology/test/ITKMathematicalMorphologyTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/MathematicalMorphology/test/ITKMathematicalMorphologyTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkClosingByReconstructionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkMomentsThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkMomentsThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkMomentsThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkMomentsThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuMultipleThresholdsCalculatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuMultipleThresholdsCalculatorTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkOtsuMultipleThresholdsCalculatorTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkOtsuMultipleThresholdsCalculatorTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkOtsuMultipleThresholdsCalculator.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuMultipleThresholdsImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkConnectedComponentImageFilterBackgroundTest.cxx.o -c /<>/Modules/Segmentation/ConnectedComponents/test/itkConnectedComponentImageFilterBackgroundTest.cxx In file included from /<>/Modules/Segmentation/ConnectedComponents/test/itkConnectedComponentImageFilterBackgroundTest.cxx:19: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkConnectedComponentImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkThresholdMaximumConnectedComponentsImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkHistogramMatchingImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkHistogramMatchingImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkHistogramMatchingImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkHistogramMatchingImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkDivideImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkSigmoidImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkSigmoidImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkSigmoidImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkSigmoidImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkDivideImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToProbabilityImageFilterTest1.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToProbabilityImageFilterTest1.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToProbabilityImageFilterTest1.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkScalarImageToHistogramGenerator.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToProbabilityImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryImageToStatisticsLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryImageToStatisticsLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryImageToStatisticsLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryReconstructionByDilationImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkDivideImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkDivideImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkDivideImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkDivideImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkDivideOrZeroOutImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkConnectedComponentImageFilterTest.cxx.o -c /<>/Modules/Segmentation/ConnectedComponents/test/itkConnectedComponentImageFilterTest.cxx In file included from /<>/Modules/Segmentation/ConnectedComponents/test/itkConnectedComponentImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkConnectedComponentImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkScalarConnectedComponentImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkDivideImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkDivideImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkDivideImageFilterTest2.cxx:19: In file included from /<>/Modules/Core/Common/include/itkVectorImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorExpandImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkDivideOrZeroOutImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkDivideOrZeroOutImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkDivideOrZeroOutImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkDivideOrZeroOutImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkAdaptImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorExpandImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkVectorExpandImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkVectorExpandImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkVectorExpandImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkOrImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAdaptImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkAdaptImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkAdaptImageFilterTest.cxx:34: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAdaptImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkRGBToLuminanceImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuMultipleThresholdsImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkOtsuMultipleThresholdsImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkOtsuMultipleThresholdsImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuThresholdCalculatorVersusOtsuMultipleThresholdsCalculatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkClosingByReconstructionImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkClosingByReconstructionImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkClosingByReconstructionImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkClosingByReconstructionImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkFlatStructuringElementTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkThresholdMaximumConnectedComponentsImageFilterTest.cxx.o -c /<>/Modules/Segmentation/ConnectedComponents/test/itkThresholdMaximumConnectedComponentsImageFilterTest.cxx In file included from /<>/Modules/Segmentation/ConnectedComponents/test/itkThresholdMaximumConnectedComponentsImageFilterTest.cxx:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkVectorConnectedComponentImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToProbabilityImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToProbabilityImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkHistogramToProbabilityImageFilterTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToHistogramFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkAccumulateImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkOrImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkOrImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkOrImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkOrImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkXorImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryReconstructionByDilationImageFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryReconstructionByDilationImageFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryReconstructionByDilationImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryReconstructionByErosionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkRGBToLuminanceImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkRGBToLuminanceImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkRGBToLuminanceImageFilterAndAdaptorTest.cxx:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkRGBToLuminanceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkSubtractImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkScalarConnectedComponentImageFilterTest.cxx.o -c /<>/Modules/Segmentation/ConnectedComponents/test/itkScalarConnectedComponentImageFilterTest.cxx In file included from /<>/Modules/Segmentation/ConnectedComponents/test/itkScalarConnectedComponentImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkScalarConnectedComponentImageFilter.h:33: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkConnectedComponentFunctorImageFilter.h:21: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkConnectedComponentImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkConnectedComponentImageFilterTooManyObjectsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkXorImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkXorImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkXorImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkXorImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkComplexToImaginaryFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkSubtractImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkSubtractImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkSubtractImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkSubtractImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorToRGBImageAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuThresholdCalculatorVersusOtsuMultipleThresholdsCalculatorTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkOtsuThresholdCalculatorVersusOtsuMultipleThresholdsCalculatorTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkOtsuThresholdCalculatorVersusOtsuMultipleThresholdsCalculatorTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuThresholdCalculatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkAccumulateImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkAccumulateImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkAccumulateImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkAccumulateImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkAdaptiveHistogramEqualizationImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorToRGBImageAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkVectorToRGBImageAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkVectorToRGBImageAdaptorTest.cxx:29: In file included from /<>/Modules/Core/ImageAdaptors/include/itkVectorToRGBImageAdaptor.h:21: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkSinImageFilterAndAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkComplexToImaginaryFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkComplexToImaginaryFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkComplexToImaginaryFilterAndAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkComplexToImaginaryImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkPolylineMask2DImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkConnectedComponentImageFilterTooManyObjectsTest.cxx.o -c /<>/Modules/Segmentation/ConnectedComponents/test/itkConnectedComponentImageFilterTooManyObjectsTest.cxx In file included from /<>/Modules/Segmentation/ConnectedComponents/test/itkConnectedComponentImageFilterTooManyObjectsTest.cxx:19: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkConnectedComponentImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Segmentation/ConnectedComponents/test/CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkMaskConnectedComponentImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuThresholdCalculatorTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkOtsuThresholdCalculatorTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkOtsuThresholdCalculatorTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkOtsuThresholdCalculator.h:23: In file included from /<>/Modules/Filtering/Thresholding/include/itkOtsuMultipleThresholdsCalculator.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkFlatStructuringElementTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkFlatStructuringElementTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkFlatStructuringElementTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkFlatStructuringElement.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkFlatStructuringElementTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkSinImageFilterAndAdaptorTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkSinImageFilterAndAdaptorTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkSinImageFilterAndAdaptorTest.cxx:20: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkSinImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkPolylineMaskImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryReconstructionByErosionImageFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryReconstructionByErosionImageFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryReconstructionByErosionImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryReconstructionLabelMapFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkPolylineMask2DImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkPolylineMask2DImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkPolylineMask2DImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkPolylineMask2DImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkPromoteDimensionImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkVectorConnectedComponentImageFilterTest.cxx.o -c /<>/Modules/Segmentation/ConnectedComponents/test/itkVectorConnectedComponentImageFilterTest.cxx In file included from /<>/Modules/Segmentation/ConnectedComponents/test/itkVectorConnectedComponentImageFilterTest.cxx:20: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkVectorConnectedComponentImageFilter.h:33: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkConnectedComponentFunctorImageFilter.h:21: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkConnectedComponentImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkModulusImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkAdaptiveHistogramEqualizationImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkAdaptiveHistogramEqualizationImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkAdaptiveHistogramEqualizationImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkGetAverageSliceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkFlatStructuringElementTest2.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkFlatStructuringElementTest2.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkFlatStructuringElementTest2.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkFlatStructuringElement.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkFlatStructuringElementTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkMaskConnectedComponentImageFilterTest.cxx.o -c /<>/Modules/Segmentation/ConnectedComponents/test/itkMaskConnectedComponentImageFilterTest.cxx In file included from /<>/Modules/Segmentation/ConnectedComponents/test/itkMaskConnectedComponentImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/ConnectedComponents/include/itkConnectedComponentImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Linking CXX executable ../../../../bin/ITKConnectedComponentsTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/ConnectedComponents/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKConnectedComponentsTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKConnectedComponentsTestDriver.dir/ITKConnectedComponentsTestDriver.cxx.o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkRelabelComponentImageFilterTest.cxx.o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkHardConnectedComponentImageFilterTest.cxx.o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkConnectedComponentImageFilterTestRGB.cxx.o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkConnectedComponentImageFilterTest.cxx.o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkConnectedComponentImageFilterBackgroundTest.cxx.o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkThresholdMaximumConnectedComponentsImageFilterTest.cxx.o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkScalarConnectedComponentImageFilterTest.cxx.o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkVectorConnectedComponentImageFilterTest.cxx.o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkConnectedComponentImageFilterTooManyObjectsTest.cxx.o CMakeFiles/ITKConnectedComponentsTestDriver.dir/itkMaskConnectedComponentImageFilterTest.cxx.o -o ../../../../bin/ITKConnectedComponentsTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 46%] Built target ITKConnectedComponentsTestDriver make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleConnectedClosingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkModulusImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkModulusImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkModulusImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorMagnitudeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkPolylineMaskImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkPolylineMaskImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkPolylineMaskImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkPolylineMaskImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkNormalizeToConstantImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkOtsuThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkOtsuThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkOtsuThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkRenyiEntropyThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryReconstructionLabelMapFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryReconstructionLabelMapFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryReconstructionLabelMapFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryShapeKeepNObjectsImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkPromoteDimensionImageTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkPromoteDimensionImageTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkPromoteDimensionImageTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkEqualTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorMagnitudeImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkVectorMagnitudeImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkVectorMagnitudeImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkVectorMagnitudeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkNotEqualTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNormalizeToConstantImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkNormalizeToConstantImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkNormalizeToConstantImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkNormalizeToConstantImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkGreaterEqualTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkGetAverageSliceImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkGetAverageSliceImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkGetAverageSliceImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkGetAverageSliceImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkAccumulateImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkBinaryProjectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkFlatStructuringElementTest3.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkFlatStructuringElementTest3.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkFlatStructuringElementTest3.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkFlatStructuringElement.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleConnectedOpeningImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNotEqualTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkNotEqualTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkNotEqualTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkGreaterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkEqualTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkEqualTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkEqualTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkLessEqualTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkGreaterEqualTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkGreaterEqualTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkGreaterEqualTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkLessTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleConnectedClosingImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleConnectedClosingImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleConnectedClosingImageFilterTest.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleFillholeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkLessEqualTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkLessEqualTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkLessEqualTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkClampImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkGreaterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkGreaterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkGreaterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkNthElementPixelAccessorTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkRenyiEntropyThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkRenyiEntropyThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkRenyiEntropyThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkRenyiEntropyThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkShanbhagThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkLessTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkLessTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkLessTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageIntensity/test/CMakeFiles/ITKImageIntensityTestDriver.dir/itkMagnitudeAndPhaseToComplexImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkBinaryProjectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkBinaryProjectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkBinaryProjectionImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkProjectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNthElementPixelAccessorTest2.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkNthElementPixelAccessorTest2.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkNthElementPixelAccessorTest2.cxx:33: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAdaptImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/ImageStatistics/test/CMakeFiles/ITKImageStatisticsTestDriver.dir/itkLabelOverlapMeasuresImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleConnectedOpeningImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleConnectedOpeningImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleConnectedOpeningImageFilterTest.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleFunctionDilateImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMagnitudeAndPhaseToComplexImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkMagnitudeAndPhaseToComplexImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkMagnitudeAndPhaseToComplexImageFilterTest.cxx:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleFunctionErodeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleFillholeImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleFillholeImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleFillholeImageFilterTest.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleMorphologicalClosingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryShapeKeepNObjectsImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryShapeKeepNObjectsImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryShapeKeepNObjectsImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkProjectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkProjectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkProjectionImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryShapeOpeningImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryStatisticsKeepNObjectsImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkShanbhagThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkShanbhagThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkShanbhagThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkShanbhagThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleFunctionDilateImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleFunctionDilateImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleFunctionDilateImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleFunctionDilateImageFilter.h:21: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkMorphologyImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleMorphologicalOpeningImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkLabelOverlapMeasuresImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageStatistics/test/itkLabelOverlapMeasuresImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageStatistics/test/itkLabelOverlapMeasuresImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Linking CXX executable ../../../../bin/ITKImageStatisticsTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageStatistics/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageStatisticsTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageStatisticsTestDriver.dir/ITKImageStatisticsTestDriver.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkStatisticsImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkLabelStatisticsImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkSumProjectionImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkStandardDeviationProjectionImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImageMomentsTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImageToHistogramFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImageToHistogramFilterTest2.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImageToHistogramFilterTest3.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMinimumMaximumImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImagePCAShapeModelEstimatorTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMaximumProjectionImageFilterTest2.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMaximumProjectionImageFilterTest3.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMinimumProjectionImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMeanProjectionImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkImagePCADecompositionCalculatorTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMaximumProjectionImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkMedianProjectionImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToEntropyImageFilterTest1.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToEntropyImageFilterTest2.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToIntensityImageFilterTest1.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToIntensityImageFilterTest2.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToLogProbabilityImageFilterTest1.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToLogProbabilityImageFilterTest2.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToProbabilityImageFilterTest1.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkHistogramToProbabilityImageFilterTest2.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkAccumulateImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkAdaptiveHistogramEqualizationImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkGetAverageSliceImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkBinaryProjectionImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkProjectionImageFilterTest.cxx.o CMakeFiles/ITKImageStatisticsTestDriver.dir/itkLabelOverlapMeasuresImageFilterTest.cxx.o -o ../../../../bin/ITKImageStatisticsTestDriver -ldouble-conversion ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 46%] Built target ITKImageStatisticsTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/build.make Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BinaryMathematicalMorphology/test /<>/BUILD /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBinaryMathematicalMorphologyTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/build.make Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/ITKBinaryMathematicalMorphologyTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleFunctionErodeImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleFunctionErodeImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleFunctionErodeImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleFunctionErodeImageFilter.h:21: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkMorphologyImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleGeodesicErodeDilateImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkThresholdLabelerImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkThresholdLabelerImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkThresholdLabelerImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkThresholdLabelerImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/Thresholding/include/itkThresholdLabelerImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkTriangleThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleMorphologicalClosingImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleMorphologicalClosingImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleMorphologicalClosingImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleMorphologicalClosingImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkYenThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryShapeOpeningImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryShapeOpeningImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryShapeOpeningImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryStatisticsOpeningImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkTriangleThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkTriangleThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkTriangleThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkTriangleThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkHuangMaskedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryStatisticsKeepNObjectsImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryStatisticsKeepNObjectsImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryStatisticsKeepNObjectsImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkChangeLabelLabelMapFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkYenThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkYenThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkYenThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkYenThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkIntermodesMaskedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkChangeLabelLabelMapFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkChangeLabelLabelMapFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkChangeLabelLabelMapFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkChangeRegionLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryStatisticsOpeningImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkBinaryStatisticsOpeningImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkBinaryStatisticsOpeningImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkConvertLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkHuangMaskedThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkHuangMaskedThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkHuangMaskedThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkHuangThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkIsoDataMaskedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/ITKBinaryMathematicalMorphologyTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test/ITKBinaryMathematicalMorphologyTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test/ITKBinaryMathematicalMorphologyTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryClosingByReconstructionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkIntermodesMaskedThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkIntermodesMaskedThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkIntermodesMaskedThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkIntermodesThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkKittlerIllingworthMaskedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkChangeRegionLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkChangeRegionLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkChangeRegionLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkConvertLabelMapFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkConvertLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkConvertLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkConvertLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkCropLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkIsoDataMaskedThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkIsoDataMaskedThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkIsoDataMaskedThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkIsoDataThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkLiMaskedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkKittlerIllingworthMaskedThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkKittlerIllingworthMaskedThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkKittlerIllingworthMaskedThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkKittlerIllingworthThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkMaximumEntropyMaskedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryClosingByReconstructionImageFilterTest.cxx.o -c /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryClosingByReconstructionImageFilterTest.cxx In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryClosingByReconstructionImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryDilateImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkCropLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkCropLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkCropLabelMapFilterTest1.cxx:28: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryDilateImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkLiMaskedThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkLiMaskedThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkLiMaskedThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkLiThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkMomentsMaskedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryDilateImageFilterTest.cxx.o -c /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryDilateImageFilterTest.cxx In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryDilateImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/include/itkBinaryDilateImageFilter.h:23: In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/include/itkBinaryMorphologyImageFilter.h:23: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryDilateImageFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryDilateImageFilterTest2.cxx.o -c /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryDilateImageFilterTest2.cxx In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryDilateImageFilterTest2.cxx:19: In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/include/itkFastIncrementalBinaryDilateImageFilter.h:23: In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/include/itkBinaryDilateImageFilter.h:23: In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/include/itkBinaryMorphologyImageFilter.h:23: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryErodeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkConvertLabelMapFilterTest2.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkConvertLabelMapFilterTest2.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkConvertLabelMapFilterTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelImageToLabelMapFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkMaximumEntropyMaskedThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkMaximumEntropyMaskedThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkMaximumEntropyMaskedThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkMaximumEntropyThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelImageToShapeLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelImageToLabelMapFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelImageToLabelMapFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelImageToLabelMapFilterTest.cxx:20: In file included from /<>/Modules/Filtering/LabelMap/include/itkLabelImageToLabelMapFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelImageToShapeLabelMapFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryErodeImageFilterTest.cxx.o -c /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryErodeImageFilterTest.cxx In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryErodeImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/include/itkBinaryErodeImageFilter.h:23: In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/include/itkBinaryMorphologyImageFilter.h:23: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryErodeImageFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryDilateImageFilterTest3.cxx.o -c /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryDilateImageFilterTest3.cxx In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryDilateImageFilterTest3.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 46%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryMorphologicalClosingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkMomentsMaskedThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkMomentsMaskedThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkMomentsMaskedThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkMomentsThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuMaskedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelImageToShapeLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelImageToShapeLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelImageToShapeLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelImageToStatisticsLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelImageToShapeLabelMapFilterTest2.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelImageToShapeLabelMapFilterTest2.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelImageToShapeLabelMapFilterTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelMapFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelMapFilterTest.cxx:20: In file included from /<>/Modules/Filtering/LabelMap/include/itkLabelMap.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapMaskImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryErodeImageFilterTest3.cxx.o -c /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryErodeImageFilterTest3.cxx In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryErodeImageFilterTest3.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryMorphologicalOpeningImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryMorphologicalClosingImageFilterTest.cxx.o -c /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryMorphologicalClosingImageFilterTest.cxx In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryMorphologicalClosingImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryOpeningByReconstructionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuMaskedThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkOtsuMaskedThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkOtsuMaskedThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkOtsuThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkRenyiEntropyMaskedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageIntensityTestDriver.dir/itkClampImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageIntensity/test/itkClampImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageIntensity/test/itkClampImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkClampImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Linking CXX executable ../../../../bin/ITKImageIntensityTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapMaskImageFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelMapMaskImageFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelMapMaskImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkShanbhagMaskedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelImageToStatisticsLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelImageToStatisticsLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelImageToStatisticsLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageIntensity/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageIntensityTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageIntensityTestDriver.dir/ITKImageIntensityTestDriver.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkCosImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkExpImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorRescaleIntensityImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkTernaryMagnitudeSquaredImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkTernaryOperatorImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMinimumImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkLog10ImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorIndexSelectionCastImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkInvertIntensityImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkSymmetricEigenAnalysisImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkEdgePotentialImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkComplexToModulusFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAddImageAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAndImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAdaptImageFilterTest2.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkLogImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNotImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkImageAdaptorNthElementTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkConstrainedValueAdditionImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAtanImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMaskNegatedImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAddImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAddImageFilterTest2.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAddImageFilterFrameTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkPowImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMultiplyImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkWeightedAddImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkRescaleIntensityImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNormalizeImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNaryAddImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkShiftScaleImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkComplexToPhaseFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkIntensityWindowingImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkTernaryMagnitudeImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAbsImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMaximumImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkBinaryMagnitudeImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMatrixIndexSelectionImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkSquareImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkRGBToVectorAdaptImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkComplexToRealFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNaryMaximumImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAtan2ImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkSqrtImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAsinImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMaskImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkHistogramMatchingImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAcosImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkExpNegativeImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkTanImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkSigmoidImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkDivideImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkDivideImageFilterTest2.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkDivideOrZeroOutImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorExpandImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkAdaptImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkOrImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkRGBToLuminanceImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkXorImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkSubtractImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkComplexToImaginaryFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorToRGBImageAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkSinImageFilterAndAdaptorTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkPolylineMask2DImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkPolylineMaskImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkPromoteDimensionImageTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkModulusImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkVectorMagnitudeImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNormalizeToConstantImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkEqualTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNotEqualTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkGreaterEqualTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkGreaterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkLessEqualTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkLessTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkClampImageFilterTest.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkNthElementPixelAccessorTest2.cxx.o CMakeFiles/ITKImageIntensityTestDriver.dir/itkMagnitudeAndPhaseToComplexImageFilterTest.cxx.o -o ../../../../bin/ITKImageIntensityTestDriver ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 47%] Built target ITKImageIntensityTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyHeaderTest1.dir/build.make Modules/Filtering/BinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 47%] Generating test/ITKBinaryMathematicalMorphologyHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKBinaryMathematicalMorphology /<>/Modules/Filtering/BinaryMathematicalMorphology /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BinaryMathematicalMorphology /<>/BUILD /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBinaryMathematicalMorphologyHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyHeaderTest1.dir/build.make Modules/Filtering/BinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyHeaderTest1.dir/test/ITKBinaryMathematicalMorphologyHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyHeaderTest1.dir/test/ITKBinaryMathematicalMorphologyHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test/ITKBinaryMathematicalMorphologyHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test/ITKBinaryMathematicalMorphologyHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/include/itkBinaryPruningImageFilter.hxx:23: In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/include/itkBinaryPruningImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Linking CXX executable ../../../bin/ITKBinaryMathematicalMorphologyHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKBinaryMathematicalMorphologyHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKBinaryMathematicalMorphologyHeaderTest1.dir/test/ITKBinaryMathematicalMorphologyHeaderTest1.cxx.o -o ../../../bin/ITKBinaryMathematicalMorphologyHeaderTest1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 47%] Built target ITKBinaryMathematicalMorphologyHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageLabel/test/CMakeFiles/ITKImageLabelTestDriver.dir/build.make Modules/Filtering/ImageLabel/test/CMakeFiles/ITKImageLabelTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageLabel/test /<>/BUILD /<>/BUILD/Modules/Filtering/ImageLabel/test /<>/BUILD/Modules/Filtering/ImageLabel/test/CMakeFiles/ITKImageLabelTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageLabelTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageLabel/test/CMakeFiles/ITKImageLabelTestDriver.dir/build.make Modules/Filtering/ImageLabel/test/CMakeFiles/ITKImageLabelTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/ImageLabel/test/CMakeFiles/ITKImageLabelTestDriver.dir/ITKImageLabelTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelMapTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelMapTest.cxx:20: In file included from /<>/Modules/Filtering/LabelMap/include/itkLabelMap.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryMorphologicalOpeningImageFilterTest.cxx.o -c /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryMorphologicalOpeningImageFilterTest.cxx In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryMorphologicalOpeningImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryThinningImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapTest2.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelMapTest2.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelMapTest2.cxx:20: In file included from /<>/Modules/Filtering/LabelMap/include/itkLabelMap.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapToAttributeImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkRenyiEntropyMaskedThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkRenyiEntropyMaskedThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkRenyiEntropyMaskedThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkRenyiEntropyThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkTriangleMaskedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkShanbhagMaskedThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkShanbhagMaskedThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkShanbhagMaskedThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkShanbhagThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkYenMaskedThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryThinningImageFilterTest.cxx.o -c /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryThinningImageFilterTest.cxx In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryThinningImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/BinaryMathematicalMorphology/test/CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkErodeObjectMorphologyImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryOpeningByReconstructionImageFilterTest.cxx.o -c /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryOpeningByReconstructionImageFilterTest.cxx In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkBinaryOpeningByReconstructionImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleMorphologicalOpeningImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleMorphologicalOpeningImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleMorphologicalOpeningImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleMorphologicalOpeningImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleGeodesicErodeDilateImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleGeodesicErodeDilateImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleGeodesicErodeDilateImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleGeodesicDilateImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkKappaSigmaThresholdImageCalculatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHConvexImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHConcaveImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkKappaSigmaThresholdImageCalculatorTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkKappaSigmaThresholdImageCalculatorTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkKappaSigmaThresholdImageCalculatorTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkKappaSigmaThresholdImageCalculator.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/Thresholding/test/CMakeFiles/ITKThresholdingTestDriver.dir/itkKappaSigmaThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkErodeObjectMorphologyImageFilterTest.cxx.o -c /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkErodeObjectMorphologyImageFilterTest.cxx In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/test/itkErodeObjectMorphologyImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/include/itkErodeObjectMorphologyImageFilter.h:21: In file included from /<>/Modules/Filtering/BinaryMathematicalMorphology/include/itkObjectMorphologyImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Linking CXX executable ../../../../bin/ITKBinaryMathematicalMorphologyTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapToAttributeImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelMapToAttributeImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelMapToAttributeImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapToBinaryImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/ITKBinaryMathematicalMorphologyTestDriver.cxx.o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryClosingByReconstructionImageFilterTest.cxx.o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryDilateImageFilterTest.cxx.o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryDilateImageFilterTest2.cxx.o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryDilateImageFilterTest3.cxx.o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryErodeImageFilterTest.cxx.o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryErodeImageFilterTest3.cxx.o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryMorphologicalClosingImageFilterTest.cxx.o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryMorphologicalOpeningImageFilterTest.cxx.o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryOpeningByReconstructionImageFilterTest.cxx.o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkBinaryThinningImageFilterTest.cxx.o CMakeFiles/ITKBinaryMathematicalMorphologyTestDriver.dir/itkErodeObjectMorphologyImageFilterTest.cxx.o -o ../../../../bin/ITKBinaryMathematicalMorphologyTestDriver ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 47%] Built target ITKBinaryMathematicalMorphologyTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageLabel/CMakeFiles/ITKImageLabelHeaderTest1.dir/build.make Modules/Filtering/ImageLabel/CMakeFiles/ITKImageLabelHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 47%] Generating test/ITKImageLabelHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageLabel && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageLabel /<>/Modules/Filtering/ImageLabel /<>/BUILD/Modules/Filtering/ImageLabel 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageLabel /<>/BUILD /<>/BUILD/Modules/Filtering/ImageLabel /<>/BUILD/Modules/Filtering/ImageLabel/CMakeFiles/ITKImageLabelHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageLabelHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageLabel/CMakeFiles/ITKImageLabelHeaderTest1.dir/build.make Modules/Filtering/ImageLabel/CMakeFiles/ITKImageLabelHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/ImageLabel/CMakeFiles/ITKImageLabelHeaderTest1.dir/test/ITKImageLabelHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageLabel && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageLabelHeaderTest1.dir/test/ITKImageLabelHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/ImageLabel/test/ITKImageLabelHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/ImageLabel/test/ITKImageLabelHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/ImageLabel/include/itkLabelContourImageFilter.hxx:21: In file included from /<>/Modules/Filtering/ImageLabel/include/itkLabelContourImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Linking CXX executable ../../../bin/ITKImageLabelHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageLabel && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageLabelHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageLabelHeaderTest1.dir/test/ITKImageLabelHeaderTest1.cxx.o -o ../../../bin/ITKImageLabelHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 47%] Built target ITKImageLabelHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NarrowBand/test/CMakeFiles/ITKNarrowBandTestDriver.dir/build.make Modules/Numerics/NarrowBand/test/CMakeFiles/ITKNarrowBandTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/NarrowBand/test /<>/BUILD /<>/BUILD/Modules/Numerics/NarrowBand/test /<>/BUILD/Modules/Numerics/NarrowBand/test/CMakeFiles/ITKNarrowBandTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNarrowBandTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NarrowBand/test/CMakeFiles/ITKNarrowBandTestDriver.dir/build.make Modules/Numerics/NarrowBand/test/CMakeFiles/ITKNarrowBandTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Numerics/NarrowBand/test/CMakeFiles/ITKNarrowBandTestDriver.dir/ITKNarrowBandTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkTriangleMaskedThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkTriangleMaskedThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkTriangleMaskedThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkTriangleThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Numerics/NarrowBand/test/CMakeFiles/ITKNarrowBandTestDriver.dir/itkNarrowBandTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NarrowBand/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Numerics/NarrowBand/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNarrowBandTestDriver.dir/itkNarrowBandTest.cxx.o -c /<>/Modules/Numerics/NarrowBand/test/itkNarrowBandTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Numerics/NarrowBand/test/CMakeFiles/ITKNarrowBandTestDriver.dir/itkNarrowBandImageFilterBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHConcaveImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkHConcaveImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkHConcaveImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkHConcaveImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHConvexConcaveImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkKappaSigmaThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkKappaSigmaThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkKappaSigmaThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkKappaSigmaThresholdImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHMaximaImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHConvexImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkHConvexImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkHConvexImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkHConvexImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHMinimaImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKThresholdingTestDriver.dir/itkYenMaskedThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/Thresholding/test/itkYenMaskedThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/Thresholding/test/itkYenMaskedThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Thresholding/include/itkYenThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Linking CXX executable ../../../../bin/ITKThresholdingTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapToBinaryImageFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelMapToBinaryImageFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelMapToBinaryImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapToLabelImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Thresholding/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKThresholdingTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKThresholdingTestDriver.dir/ITKThresholdingTestDriver.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkBinaryThresholdImageFilterTest2.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkBinaryThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkBinaryThresholdProjectionImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkBinaryThresholdSpatialFunctionTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkHuangThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkIntermodesThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkIsoDataThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkKittlerIllingworthThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkLiThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkMaximumEntropyThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkMomentsThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuMultipleThresholdsCalculatorTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuMultipleThresholdsImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuThresholdCalculatorVersusOtsuMultipleThresholdsCalculatorTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuThresholdCalculatorTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkRenyiEntropyThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkShanbhagThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkThresholdLabelerImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkTriangleThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkYenThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkHuangMaskedThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkIntermodesMaskedThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkIsoDataMaskedThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkKittlerIllingworthMaskedThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkLiMaskedThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkMaximumEntropyMaskedThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkMomentsMaskedThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkOtsuMaskedThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkRenyiEntropyMaskedThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkShanbhagMaskedThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkTriangleMaskedThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkYenMaskedThresholdImageFilterTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkKappaSigmaThresholdImageCalculatorTest.cxx.o CMakeFiles/ITKThresholdingTestDriver.dir/itkKappaSigmaThresholdImageFilterTest.cxx.o -o ../../../../bin/ITKThresholdingTestDriver -ldouble-conversion ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 47%] Built target ITKThresholdingTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NarrowBand/CMakeFiles/ITKNarrowBandHeaderTest1.dir/build.make Modules/Numerics/NarrowBand/CMakeFiles/ITKNarrowBandHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 47%] Generating test/ITKNarrowBandHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NarrowBand && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKNarrowBand /<>/Modules/Numerics/NarrowBand /<>/BUILD/Modules/Numerics/NarrowBand 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/NarrowBand /<>/BUILD /<>/BUILD/Modules/Numerics/NarrowBand /<>/BUILD/Modules/Numerics/NarrowBand/CMakeFiles/ITKNarrowBandHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNarrowBandHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NarrowBand/CMakeFiles/ITKNarrowBandHeaderTest1.dir/build.make Modules/Numerics/NarrowBand/CMakeFiles/ITKNarrowBandHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Numerics/NarrowBand/CMakeFiles/ITKNarrowBandHeaderTest1.dir/test/ITKNarrowBandHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NarrowBand && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNarrowBandHeaderTest1.dir/test/ITKNarrowBandHeaderTest1.cxx.o -c /<>/BUILD/Modules/Numerics/NarrowBand/test/ITKNarrowBandHeaderTest1.cxx In file included from /<>/BUILD/Modules/Numerics/NarrowBand/test/ITKNarrowBandHeaderTest1.cxx:23: In file included from /<>/Modules/Numerics/NarrowBand/include/itkNarrowBandImageFilterBase.hxx:21: In file included from /<>/Modules/Numerics/NarrowBand/include/itkNarrowBandImageFilterBase.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Linking CXX executable ../../../bin/ITKNarrowBandHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NarrowBand && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKNarrowBandHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKNarrowBandHeaderTest1.dir/test/ITKNarrowBandHeaderTest1.cxx.o -o ../../../bin/ITKNarrowBandHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 47%] Built target ITKNarrowBandHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/build.make Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DistanceMap/test /<>/BUILD /<>/BUILD/Modules/Filtering/DistanceMap/test /<>/BUILD/Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDistanceMapTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/build.make Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/ITKDistanceMapTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapToLabelImageFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelMapToLabelImageFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelMapToLabelImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/LabelMap/include/itkLabelMap.h:21: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelObjectLineComparatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NarrowBand/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Numerics/NarrowBand/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNarrowBandTestDriver.dir/itkNarrowBandImageFilterBaseTest.cxx.o -c /<>/Modules/Numerics/NarrowBand/test/itkNarrowBandImageFilterBaseTest.cxx In file included from /<>/Modules/Numerics/NarrowBand/test/itkNarrowBandImageFilterBaseTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHMaximaMinimaImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelObjectLineComparatorTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelObjectLineComparatorTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelObjectLineTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelObjectLineTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelObjectLineTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelObjectTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelObjectTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelSelectionLabelMapFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHMaximaImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkHMaximaImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkHMaximaImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMorphologicalGradientImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageLabel/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageLabelTestDriver.dir/ITKImageLabelTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/ImageLabel/test/ITKImageLabelTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/ImageLabel/test/ITKImageLabelTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/ImageLabel/test/CMakeFiles/ITKImageLabelTestDriver.dir/itkChangeLabelImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHMinimaImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkHMinimaImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkHMinimaImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkOpeningByReconstructionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHConvexConcaveImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkHConvexConcaveImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkHConvexConcaveImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkOpeningByReconstructionImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageLabel/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageLabelTestDriver.dir/itkChangeLabelImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageLabel/test/itkChangeLabelImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageLabel/test/itkChangeLabelImageFilterTest.cxx:19: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/ImageLabel/test/CMakeFiles/ITKImageLabelTestDriver.dir/itkLabelContourImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelSelectionLabelMapFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelSelectionLabelMapFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelSelectionLabelMapFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelShapeKeepNObjectsImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHMaximaMinimaImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkHMaximaMinimaImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkHMaximaMinimaImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkDoubleThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMorphologicalGradientImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkMorphologicalGradientImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkMorphologicalGradientImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkRemoveBoundaryObjectsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageLabel/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageLabelTestDriver.dir/itkLabelContourImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageLabel/test/itkLabelContourImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageLabel/test/itkLabelContourImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/ImageLabel/test/CMakeFiles/ITKImageLabelTestDriver.dir/itkBinaryContourImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkOpeningByReconstructionImageFilterTest2.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkOpeningByReconstructionImageFilterTest2.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkOpeningByReconstructionImageFilterTest2.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkOpeningByReconstructionImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkRemoveBoundaryObjectsTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkOpeningByReconstructionImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkOpeningByReconstructionImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkOpeningByReconstructionImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkOpeningByReconstructionImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkShapedIteratorFromStructuringElementTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkShapedIteratorFromStructuringElementTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkShapedIteratorFromStructuringElementTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkShapedIteratorFromStructuringElementTest.cxx:18: In file included from /<>/Modules/Core/Common/include/itkShapedNeighborhoodIterator.h:23: In file included from /<>/Modules/Core/Common/include/itkConstShapedNeighborhoodIterator.h:23: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkTopHatImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NarrowBand/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Numerics/NarrowBand/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKNarrowBandTestDriver.dir/ITKNarrowBandTestDriver.cxx.o -c /<>/BUILD/Modules/Numerics/NarrowBand/test/ITKNarrowBandTestDriver.cxx In file included from /<>/BUILD/Modules/Numerics/NarrowBand/test/ITKNarrowBandTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Linking CXX executable ../../../../bin/ITKNarrowBandTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/NarrowBand/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKNarrowBandTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKNarrowBandTestDriver.dir/ITKNarrowBandTestDriver.cxx.o CMakeFiles/ITKNarrowBandTestDriver.dir/itkNarrowBandTest.cxx.o CMakeFiles/ITKNarrowBandTestDriver.dir/itkNarrowBandImageFilterBaseTest.cxx.o -o ../../../../bin/ITKNarrowBandTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 47%] Built target ITKNarrowBandTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DistanceMap/CMakeFiles/ITKDistanceMapHeaderTest1.dir/build.make Modules/Filtering/DistanceMap/CMakeFiles/ITKDistanceMapHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 47%] Generating test/ITKDistanceMapHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKDistanceMap /<>/Modules/Filtering/DistanceMap /<>/BUILD/Modules/Filtering/DistanceMap 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DistanceMap /<>/BUILD /<>/BUILD/Modules/Filtering/DistanceMap /<>/BUILD/Modules/Filtering/DistanceMap/CMakeFiles/ITKDistanceMapHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDistanceMapHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DistanceMap/CMakeFiles/ITKDistanceMapHeaderTest1.dir/build.make Modules/Filtering/DistanceMap/CMakeFiles/ITKDistanceMapHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/DistanceMap/CMakeFiles/ITKDistanceMapHeaderTest1.dir/test/ITKDistanceMapHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageLabel/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageLabelTestDriver.dir/itkBinaryContourImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageLabel/test/itkBinaryContourImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageLabel/test/itkBinaryContourImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Linking CXX executable ../../../../bin/ITKImageLabelTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkDoubleThresholdImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkDoubleThresholdImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkDoubleThresholdImageFilterTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMapGrayscaleDilateImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageLabel/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageLabelTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageLabelTestDriver.dir/ITKImageLabelTestDriver.cxx.o CMakeFiles/ITKImageLabelTestDriver.dir/itkChangeLabelImageFilterTest.cxx.o CMakeFiles/ITKImageLabelTestDriver.dir/itkLabelContourImageFilterTest.cxx.o CMakeFiles/ITKImageLabelTestDriver.dir/itkBinaryContourImageFilterTest.cxx.o -o ../../../../bin/ITKImageLabelTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 47%] Built target ITKImageLabelTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/build.make Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/QuadEdgeMesh/test /<>/BUILD /<>/BUILD/Modules/Core/QuadEdgeMesh/test /<>/BUILD/Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMeshTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/build.make Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/ITKQuadEdgeMeshTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkRemoveBoundaryObjectsTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkRemoveBoundaryObjectsTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkRemoveBoundaryObjectsTest.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshPointTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapHeaderTest1.dir/test/ITKDistanceMapHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/DistanceMap/test/ITKDistanceMapHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/DistanceMap/test/ITKDistanceMapHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/DistanceMap/include/itkContourDirectedMeanDistanceImageFilter.hxx:21: In file included from /<>/Modules/Filtering/DistanceMap/include/itkContourDirectedMeanDistanceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Linking CXX executable ../../../bin/ITKDistanceMapHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkRemoveBoundaryObjectsTest2.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkRemoveBoundaryObjectsTest2.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkRemoveBoundaryObjectsTest2.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMapGrayscaleErodeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDistanceMapHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDistanceMapHeaderTest1.dir/test/ITKDistanceMapHeaderTest1.cxx.o -o ../../../bin/ITKDistanceMapHeaderTest1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 47%] Built target ITKDistanceMapHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/build.make Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FastMarching/test /<>/BUILD /<>/BUILD/Modules/Filtering/FastMarching/test /<>/BUILD/Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFastMarchingTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/build.make Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/ITKFastMarchingTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshPointTest1.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshPointTest1.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshPointTest1.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshPoint.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelShapeKeepNObjectsImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelShapeKeepNObjectsImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelShapeKeepNObjectsImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelShapeOpeningImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/ITKDistanceMapTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/DistanceMap/test/ITKDistanceMapTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/DistanceMap/test/ITKDistanceMapTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkDanielssonDistanceMapImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshTest1.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshTest1.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshTest1.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMapGrayscaleDilateImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkMapGrayscaleDilateImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkMapGrayscaleDilateImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkFlatStructuringElement.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMapGrayscaleMorphologicalClosingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkDanielssonDistanceMapImageFilterTest.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkDanielssonDistanceMapImageFilterTest.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkDanielssonDistanceMapImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageSliceConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkDanielssonDistanceMapImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMapGrayscaleErodeImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkMapGrayscaleErodeImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkMapGrayscaleErodeImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleErodeImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMapGrayscaleMorphologicalOpeningImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkTopHatImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkTopHatImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkTopHatImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkBlackTopHatImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleDilateImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshTest2.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshTest2.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshTest2.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelShapeOpeningImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelShapeOpeningImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelShapeOpeningImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelStatisticsKeepNObjectsImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkDanielssonDistanceMapImageFilterTest1.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkDanielssonDistanceMapImageFilterTest1.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkDanielssonDistanceMapImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkDanielssonDistanceMapImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshTest3.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshTest3.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshTest3.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshPolygonCellTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleDilateImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleDilateImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleDilateImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleDilateImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleErodeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMapGrayscaleMorphologicalClosingImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkMapGrayscaleMorphologicalClosingImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkMapGrayscaleMorphologicalClosingImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleMorphologicalClosingImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleMorphologicalClosingImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMapGrayscaleMorphologicalOpeningImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkMapGrayscaleMorphologicalOpeningImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkMapGrayscaleMorphologicalOpeningImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleMorphologicalOpeningImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleMorphologicalOpeningImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshPolygonCellTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshPolygonCellTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshPolygonCellTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshFrontIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkDanielssonDistanceMapImageFilterTest2.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkDanielssonDistanceMapImageFilterTest2.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkDanielssonDistanceMapImageFilterTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedDanielssonDistanceMapImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshFrontIteratorTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshFrontIteratorTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshFrontIteratorTest.cxx:31: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshScalarDataVTKPolyDataWriterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/ITKQuadEdgeMeshTestDriver.cxx.o -c /<>/BUILD/Modules/Core/QuadEdgeMesh/test/ITKQuadEdgeMeshTestDriver.cxx In file included from /<>/BUILD/Modules/Core/QuadEdgeMesh/test/ITKQuadEdgeMeshTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/ITKFastMarchingTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/FastMarching/test/ITKFastMarchingTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/FastMarching/test/ITKFastMarchingTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingExtensionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeTest1.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkGeometricalQuadEdgeTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkGeometricalQuadEdgeTest1.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkGeometricalQuadEdgeTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshAddFaceTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleErodeImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleErodeImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleErodeImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleErodeImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMorphologicalGradientImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleMorphologicalClosingImageFilterTest2.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleMorphologicalClosingImageFilterTest2.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleMorphologicalClosingImageFilterTest2.cxx:20: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleMorphologicalClosingImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkRegionalMaximaImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleMorphologicalOpeningImageFilterTest2.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleMorphologicalOpeningImageFilterTest2.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkGrayscaleMorphologicalOpeningImageFilterTest2.cxx:20: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleMorphologicalOpeningImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkRegionalMinimaImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedDanielssonDistanceMapImageFilterTest.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkSignedDanielssonDistanceMapImageFilterTest.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkSignedDanielssonDistanceMapImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageSliceConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedDanielssonDistanceMapImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelStatisticsKeepNObjectsImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelStatisticsKeepNObjectsImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelStatisticsKeepNObjectsImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelStatisticsOpeningImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshScalarDataVTKPolyDataWriterTest1.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshScalarDataVTKPolyDataWriterTest1.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshScalarDataVTKPolyDataWriterTest1.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshAddFaceTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshAddFaceTest1.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshAddFaceTest1.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshAddFaceTest1.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.h:72: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.hxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshBasicLayerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshBasicLayerTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshBasicLayerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshCellInterfaceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingExtensionImageFilterTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingExtensionImageFilterTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingExtensionImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingExtensionImageFilterBase.h:21: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingImageFilterBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshAddFaceTest2.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshAddFaceTest2.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshAddFaceTest2.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshTopologyChecker.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.h:72: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.hxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshCountingCellsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingTest.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMorphologicalGradientImageFilterTest2.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkMorphologicalGradientImageFilterTest2.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkMorphologicalGradientImageFilterTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkValuedRegionalMaximaImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshCellInterfaceTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshCellInterfaceTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshCellInterfaceTest.cxx:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshDeleteEdgeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingTest2.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingTest2.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingTest2.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingUpwindGradientTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshCountingCellsTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshCountingCellsTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshCountingCellsTest.cxx:18: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshEulerOperatorsTestHelper.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshTopologyChecker.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.h:72: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.hxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelStatisticsOpeningImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelStatisticsOpeningImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelStatisticsOpeningImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelUniqueLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkRegionalMinimaImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkRegionalMinimaImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkRegionalMinimaImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkRegionalMinimaImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/MathematicalMorphology/test/CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkValuedRegionalMinimaImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkRegionalMaximaImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkRegionalMaximaImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkRegionalMaximaImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkRegionalMaximaImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkMergeLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshDeleteEdgeTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshDeleteEdgeTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshDeleteEdgeTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshDeletePointAndReorderIDsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingUpwindGradientTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingUpwindGradientTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingUpwindGradientTest.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingUpwindGradientImageFilter.h:21: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageFilterBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkValuedRegionalMaximaImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkValuedRegionalMaximaImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkValuedRegionalMaximaImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkValuedRegionalMaximaImageFilter.h:21: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkValuedRegionalExtremaImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageFilterRealTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingBaseTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingBaseTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingBaseTest.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageFilterRealTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshDeletePointAndReorderIDsTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshDeletePointAndReorderIDsTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshDeletePointAndReorderIDsTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorCreateCenterVertexTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkMergeLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkMergeLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkMergeLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkObjectByObjectLabelMapFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkValuedRegionalMinimaImageFilterTest.cxx.o -c /<>/Modules/Filtering/MathematicalMorphology/test/itkValuedRegionalMinimaImageFilterTest.cxx In file included from /<>/Modules/Filtering/MathematicalMorphology/test/itkValuedRegionalMinimaImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkValuedRegionalMinimaImageFilter.h:21: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkValuedRegionalExtremaImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Linking CXX executable ../../../../bin/ITKMathematicalMorphologyTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/MathematicalMorphology/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/ITKMathematicalMorphologyTestDriver.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkClosingByReconstructionImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkFlatStructuringElementTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkFlatStructuringElementTest2.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkFlatStructuringElementTest3.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleConnectedClosingImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleConnectedOpeningImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleFillholeImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleFunctionDilateImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleFunctionErodeImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleMorphologicalClosingImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleMorphologicalOpeningImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleGeodesicErodeDilateImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHConcaveImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHConvexImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHConvexConcaveImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHMaximaImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHMinimaImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkHMaximaMinimaImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMorphologicalGradientImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkOpeningByReconstructionImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkOpeningByReconstructionImageFilterTest2.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkDoubleThresholdImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkRemoveBoundaryObjectsTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkRemoveBoundaryObjectsTest2.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkShapedIteratorFromStructuringElementTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkTopHatImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMapGrayscaleDilateImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMapGrayscaleErodeImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMapGrayscaleMorphologicalClosingImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMapGrayscaleMorphologicalOpeningImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleDilateImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleErodeImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleMorphologicalClosingImageFilterTest2.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkGrayscaleMorphologicalOpeningImageFilterTest2.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkMorphologicalGradientImageFilterTest2.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkRegionalMaximaImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkRegionalMinimaImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkValuedRegionalMaximaImageFilterTest.cxx.o CMakeFiles/ITKMathematicalMorphologyTestDriver.dir/itkValuedRegionalMinimaImageFilterTest.cxx.o -o ../../../../bin/ITKMathematicalMorphologyTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 47%] Built target ITKMathematicalMorphologyTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FastMarching/CMakeFiles/ITKFastMarchingHeaderTest1.dir/build.make Modules/Filtering/FastMarching/CMakeFiles/ITKFastMarchingHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 47%] Generating test/ITKFastMarchingHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKFastMarching /<>/Modules/Filtering/FastMarching /<>/BUILD/Modules/Filtering/FastMarching 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FastMarching /<>/BUILD /<>/BUILD/Modules/Filtering/FastMarching /<>/BUILD/Modules/Filtering/FastMarching/CMakeFiles/ITKFastMarchingHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFastMarchingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FastMarching/CMakeFiles/ITKFastMarchingHeaderTest1.dir/build.make Modules/Filtering/FastMarching/CMakeFiles/ITKFastMarchingHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/CMakeFiles/ITKFastMarchingHeaderTest1.dir/test/ITKFastMarchingHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorCreateCenterVertexTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorCreateCenterVertexTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorCreateCenterVertexTest.cxx:20: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshEulerOperatorsTestHelper.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshTopologyChecker.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.h:72: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.hxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorDeleteCenterVertexTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingHeaderTest1.dir/test/ITKFastMarchingHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/FastMarching/test/ITKFastMarchingHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/FastMarching/test/ITKFastMarchingHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingQuadEdgeMeshFilterBase.hxx:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingQuadEdgeMeshFilterBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Linking CXX executable ../../../bin/ITKFastMarchingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFastMarchingHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKFastMarchingHeaderTest1.dir/test/ITKFastMarchingHeaderTest1.cxx.o -o ../../../bin/ITKFastMarchingHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 47%] Built target ITKFastMarchingHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/build.make Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageCompare/test /<>/BUILD /<>/BUILD/Modules/Filtering/ImageCompare/test /<>/BUILD/Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageCompareTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/build.make Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/ITKImageCompareTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedDanielssonDistanceMapImageFilterTest1.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkSignedDanielssonDistanceMapImageFilterTest1.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkSignedDanielssonDistanceMapImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedDanielssonDistanceMapImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageFilterRealTest2.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingImageFilterRealTest2.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingImageFilterRealTest2.cxx:20: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingImageToNodePairContainerAdaptor.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageFilterRealWithNumberOfElementsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageFilterRealTest1.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingImageFilterRealTest1.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingImageFilterRealTest1.cxx:20: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingImageFilterBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageTopologicalTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelUniqueLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkLabelUniqueLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkLabelUniqueLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkPadLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageFilterBaseTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingImageFilterBaseTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingImageFilterBaseTest.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingImageFilterBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterBaseTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorDeleteCenterVertexTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorDeleteCenterVertexTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorDeleteCenterVertexTest.cxx:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshEulerOperatorsTestHelper.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshTopologyChecker.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.h:72: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.hxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorFlipTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkObjectByObjectLabelMapFilterTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkObjectByObjectLabelMapFilterTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkObjectByObjectLabelMapFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkRegionFromReferenceLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkPadLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkPadLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkPadLabelMapFilterTest1.cxx:29: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkRelabelLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterBaseTest2.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingQuadEdgeMeshFilterBaseTest2.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingQuadEdgeMeshFilterBaseTest2.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingQuadEdgeMeshFilterBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedDanielssonDistanceMapImageFilterTest2.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkSignedDanielssonDistanceMapImageFilterTest2.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkSignedDanielssonDistanceMapImageFilterTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterBaseTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkContourMeanDistanceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageFilterRealWithNumberOfElementsTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingImageFilterRealWithNumberOfElementsTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingImageFilterRealWithNumberOfElementsTest.cxx:20: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingImageFilterBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterBaseTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorFlipTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorFlipTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorFlipTest.cxx:20: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshEulerOperatorsTestHelper.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshTopologyChecker.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.h:72: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.hxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorJoinFacetTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorJoinFacetTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorJoinFacetTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorJoinFacetTest.cxx:20: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshEulerOperatorsTestHelper.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshTopologyChecker.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.h:72: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.hxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorJoinVertexTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkRegionFromReferenceLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkRegionFromReferenceLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkRegionFromReferenceLabelMapFilterTest1.cxx:28: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeKeepNObjectsLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterBaseTest4.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingQuadEdgeMeshFilterBaseTest4.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingQuadEdgeMeshFilterBaseTest4.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingQuadEdgeMeshFilterBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkRelabelLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkRelabelLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkRelabelLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeLabelObjectAccessorsTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterBaseTest3.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingQuadEdgeMeshFilterBaseTest3.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingQuadEdgeMeshFilterBaseTest3.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingQuadEdgeMeshFilterBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterWithNumberOfElementsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkContourMeanDistanceImageFilterTest.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkContourMeanDistanceImageFilterTest.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkContourMeanDistanceImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DistanceMap/include/itkContourMeanDistanceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkContourDirectedMeanDistanceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorJoinVertexTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorJoinVertexTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorJoinVertexTest.cxx:20: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshEulerOperatorsTestHelper.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshTopologyChecker.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.h:72: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.hxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorSplitEdgeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompare/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageCompareTestDriver.dir/ITKImageCompareTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/ImageCompare/test/ITKImageCompareTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/ImageCompare/test/ITKImageCompareTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/itkAbsoluteValueDifferenceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterBaseTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingQuadEdgeMeshFilterBaseTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingQuadEdgeMeshFilterBaseTest.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingQuadEdgeMeshFilterBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingStoppingCriterionBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterWithNumberOfElementsTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingQuadEdgeMeshFilterWithNumberOfElementsTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingQuadEdgeMeshFilterWithNumberOfElementsTest.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingQuadEdgeMeshFilterBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingThresholdStoppingCriterionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingStoppingCriterionBaseTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingStoppingCriterionBaseTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingStoppingCriterionBaseTest.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageTopologicalTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingImageTopologicalTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingImageTopologicalTest.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingImageFilterBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingNumberOfElementsStoppingCriterionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/FastMarching/test/CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingUpwindGradientBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingThresholdStoppingCriterionTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingThresholdStoppingCriterionTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingThresholdStoppingCriterionTest.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingThresholdStoppingCriterion.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeOpeningLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompare/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageCompareTestDriver.dir/itkAbsoluteValueDifferenceImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompare/test/itkAbsoluteValueDifferenceImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompare/test/itkAbsoluteValueDifferenceImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageCompare/include/itkAbsoluteValueDifferenceImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/itkSquaredDifferenceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorSplitEdgeTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorSplitEdgeTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorSplitEdgeTest.cxx:20: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshEulerOperatorsTestHelper.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshTopologyChecker.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.h:72: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.hxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorSplitFaceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingNumberOfElementsStoppingCriterionTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingNumberOfElementsStoppingCriterionTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingNumberOfElementsStoppingCriterionTest.cxx:19: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingNumberOfElementsStoppingCriterion.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorSplitVertexTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkContourDirectedMeanDistanceImageFilterTest.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkContourDirectedMeanDistanceImageFilterTest.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkContourDirectedMeanDistanceImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DistanceMap/include/itkContourDirectedMeanDistanceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkFastChamferDistanceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeLabelObjectAccessorsTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkShapeLabelObjectAccessorsTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkShapeLabelObjectAccessorsTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkShapePositionLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeKeepNObjectsLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkShapeKeepNObjectsLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkShapeKeepNObjectsLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompare/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageCompareTestDriver.dir/itkSquaredDifferenceImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompare/test/itkSquaredDifferenceImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompare/test/itkSquaredDifferenceImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageCompare/include/itkSquaredDifferenceImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeRelabelImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/itkCheckerBoardImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorSplitFaceTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorSplitFaceTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorSplitFaceTest.cxx:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshEulerOperatorsTestHelper.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshTopologyChecker.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.h:72: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.hxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorSplitVertexTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorSplitVertexTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshEulerOperatorSplitVertexTest.cxx:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshEulerOperatorsTestHelper.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshTopologyChecker.h:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.h:72: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMeshBoundaryEdgesMeshFunction.hxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshNoPointConstTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompare/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageCompareTestDriver.dir/itkCheckerBoardImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompare/test/itkCheckerBoardImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompare/test/itkCheckerBoardImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageCompare/include/itkCheckerBoardImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 47%] Building CXX object Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/itkConstrainedValueDifferenceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshNoPointConstTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshNoPointConstTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshNoPointConstTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkVTKPolyDataIOQuadEdgeMeshTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/Filtering/ImageLabel/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingUpwindGradientBaseTest.cxx.o -c /<>/Modules/Filtering/FastMarching/test/itkFastMarchingUpwindGradientBaseTest.cxx In file included from /<>/Modules/Filtering/FastMarching/test/itkFastMarchingUpwindGradientBaseTest.cxx:20: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingUpwindGradientImageFilterBase.h:21: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingImageFilterBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingBase.h:23: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingStoppingCriterionBase.h:24: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingTraits.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Linking CXX executable ../../../../bin/ITKFastMarchingTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshIteratorTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshIteratorTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkQuadEdgeMeshIteratorTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkVTKPolyDataReaderQuadEdgeMeshTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FastMarching/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFastMarchingTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKFastMarchingTestDriver.dir/ITKFastMarchingTestDriver.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingExtensionImageFilterTest.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingTest.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingTest2.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingUpwindGradientTest.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingBaseTest.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageFilterBaseTest.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageFilterRealTest1.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageFilterRealTest2.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageFilterRealWithNumberOfElementsTest.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingImageTopologicalTest.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterBaseTest2.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterBaseTest3.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterBaseTest4.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterBaseTest.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingQuadEdgeMeshFilterWithNumberOfElementsTest.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingStoppingCriterionBaseTest.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingThresholdStoppingCriterionTest.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingNumberOfElementsStoppingCriterionTest.cxx.o CMakeFiles/ITKFastMarchingTestDriver.dir/itkFastMarchingUpwindGradientBaseTest.cxx.o -o ../../../../bin/ITKFastMarchingTestDriver ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKIOMesh-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 48%] Built target ITKFastMarchingTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageCompare/CMakeFiles/ITKImageCompareHeaderTest1.dir/build.make Modules/Filtering/ImageCompare/CMakeFiles/ITKImageCompareHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 48%] Generating test/ITKImageCompareHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompare && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageCompare /<>/Modules/Filtering/ImageCompare /<>/BUILD/Modules/Filtering/ImageCompare 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageCompare /<>/BUILD /<>/BUILD/Modules/Filtering/ImageCompare /<>/BUILD/Modules/Filtering/ImageCompare/CMakeFiles/ITKImageCompareHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageCompareHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageCompare/CMakeFiles/ITKImageCompareHeaderTest1.dir/build.make Modules/Filtering/ImageCompare/CMakeFiles/ITKImageCompareHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/ImageCompare/CMakeFiles/ITKImageCompareHeaderTest1.dir/test/ITKImageCompareHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompare/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageCompareTestDriver.dir/itkConstrainedValueDifferenceImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompare/test/itkConstrainedValueDifferenceImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompare/test/itkConstrainedValueDifferenceImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkConstrainedValueDifferenceImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/itkSimilarityIndexImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkFastChamferDistanceImageFilterTest.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkFastChamferDistanceImageFilterTest.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkFastChamferDistanceImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DistanceMap/include/itkFastChamferDistanceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkHausdorffDistanceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeOpeningLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkShapeOpeningLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkShapeOpeningLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeRelabelLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompare && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageCompareHeaderTest1.dir/test/ITKImageCompareHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/ImageCompare/test/ITKImageCompareHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/ImageCompare/test/ITKImageCompareHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/ImageCompare/include/itkSquaredDifferenceImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Linking CXX executable ../../../bin/ITKImageCompareHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompare && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageCompareHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageCompareHeaderTest1.dir/test/ITKImageCompareHeaderTest1.cxx.o -o ../../../bin/ITKImageCompareHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 48%] Built target ITKImageCompareHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/build.make Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Smoothing/test /<>/BUILD /<>/BUILD/Modules/Filtering/Smoothing/test /<>/BUILD/Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSmoothingTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/build.make Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/ITKSmoothingTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompare/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageCompareTestDriver.dir/itkSimilarityIndexImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompare/test/itkSimilarityIndexImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompare/test/itkSimilarityIndexImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageCompare/include/itkSimilarityIndexImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/itkSTAPLEImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkVTKPolyDataIOQuadEdgeMeshTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkVTKPolyDataIOQuadEdgeMeshTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkVTKPolyDataIOQuadEdgeMeshTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Core/QuadEdgeMesh/test/CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkDynamicQuadEdgeMeshTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapePositionLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkShapePositionLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkShapePositionLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeUniqueLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkVTKPolyDataReaderQuadEdgeMeshTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkVTKPolyDataReaderQuadEdgeMeshTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkVTKPolyDataReaderQuadEdgeMeshTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkShiftLabelObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeRelabelImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkShapeRelabelImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkShapeRelabelImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkShiftScaleLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkHausdorffDistanceImageFilterTest.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkHausdorffDistanceImageFilterTest.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkHausdorffDistanceImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DistanceMap/include/itkHausdorffDistanceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkReflectiveImageRegionIteratorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkDynamicQuadEdgeMeshTest.cxx.o -c /<>/Modules/Core/QuadEdgeMesh/test/itkDynamicQuadEdgeMeshTest.cxx In file included from /<>/Modules/Core/QuadEdgeMesh/test/itkDynamicQuadEdgeMeshTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Linking CXX executable ../../../../bin/ITKQuadEdgeMeshTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/QuadEdgeMesh/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/ITKQuadEdgeMeshTestDriver.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshPointTest1.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshTest1.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshTest2.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshTest3.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshPolygonCellTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshFrontIteratorTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshScalarDataVTKPolyDataWriterTest1.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeTest1.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkGeometricalQuadEdgeTest1.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshAddFaceTest1.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshAddFaceTest2.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshBasicLayerTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshCellInterfaceTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshCountingCellsTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshDeleteEdgeTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshDeletePointAndReorderIDsTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorCreateCenterVertexTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorDeleteCenterVertexTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorFlipTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorJoinFacetTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorJoinVertexTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorSplitEdgeTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorSplitFaceTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshEulerOperatorSplitVertexTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshIteratorTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkQuadEdgeMeshNoPointConstTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkVTKPolyDataIOQuadEdgeMeshTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkVTKPolyDataReaderQuadEdgeMeshTest.cxx.o CMakeFiles/ITKQuadEdgeMeshTestDriver.dir/itkDynamicQuadEdgeMeshTest.cxx.o -o ../../../../bin/ITKQuadEdgeMeshTestDriver ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 48%] Built target ITKQuadEdgeMeshTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/build.make Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageGradient/test /<>/BUILD /<>/BUILD/Modules/Filtering/ImageGradient/test /<>/BUILD/Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageGradientTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/build.make Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/ITKImageGradientTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkShiftLabelObjectTest.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkShiftLabelObjectTest.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkShiftLabelObjectTest.cxx:20: In file included from /<>/Modules/Filtering/LabelMap/include/itkLabelImageToLabelMapFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsKeepNObjectsLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkReflectiveImageRegionIteratorTest.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkReflectiveImageRegionIteratorTest.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkReflectiveImageRegionIteratorTest.cxx:20: In file included from /<>/Modules/Filtering/DistanceMap/include/itkReflectiveImageRegionIterator.h:21: In file included from /<>/Modules/Filtering/DistanceMap/include/itkReflectiveImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedMaurerDistanceMapImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompare/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageCompareTestDriver.dir/itkSTAPLEImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompare/test/itkSTAPLEImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompare/test/itkSTAPLEImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageCompare/include/itkSTAPLEImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/ImageCompare/test/CMakeFiles/ITKImageCompareTestDriver.dir/itkTestingComparisonImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkShiftScaleLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkShiftScaleLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkShiftScaleLabelMapFilterTest1.cxx:28: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsOpeningLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeRelabelLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkShapeRelabelLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkShapeRelabelLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsPositionLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompare/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageCompareTestDriver.dir/itkTestingComparisonImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageCompare/test/itkTestingComparisonImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageCompare/test/itkTestingComparisonImageFilterTest.cxx:20: In file included from /<>/Modules/Core/TestKernel/include/itkTestingComparisonImageFilter.h:23: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Linking CXX executable ../../../../bin/ITKImageCompareTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeUniqueLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkShapeUniqueLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkShapeUniqueLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsRelabelImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageCompare/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageCompareTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageCompareTestDriver.dir/ITKImageCompareTestDriver.cxx.o CMakeFiles/ITKImageCompareTestDriver.dir/itkAbsoluteValueDifferenceImageFilterTest.cxx.o CMakeFiles/ITKImageCompareTestDriver.dir/itkSquaredDifferenceImageFilterTest.cxx.o CMakeFiles/ITKImageCompareTestDriver.dir/itkCheckerBoardImageFilterTest.cxx.o CMakeFiles/ITKImageCompareTestDriver.dir/itkConstrainedValueDifferenceImageFilterTest.cxx.o CMakeFiles/ITKImageCompareTestDriver.dir/itkSimilarityIndexImageFilterTest.cxx.o CMakeFiles/ITKImageCompareTestDriver.dir/itkSTAPLEImageFilterTest.cxx.o CMakeFiles/ITKImageCompareTestDriver.dir/itkTestingComparisonImageFilterTest.cxx.o -o ../../../../bin/ITKImageCompareTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 48%] Built target ITKImageCompareTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageGradient/CMakeFiles/ITKImageGradientHeaderTest1.dir/build.make Modules/Filtering/ImageGradient/CMakeFiles/ITKImageGradientHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 48%] Generating test/ITKImageGradientHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageGradient /<>/Modules/Filtering/ImageGradient /<>/BUILD/Modules/Filtering/ImageGradient 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageGradient /<>/BUILD /<>/BUILD/Modules/Filtering/ImageGradient /<>/BUILD/Modules/Filtering/ImageGradient/CMakeFiles/ITKImageGradientHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageGradientHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageGradient/CMakeFiles/ITKImageGradientHeaderTest1.dir/build.make Modules/Filtering/ImageGradient/CMakeFiles/ITKImageGradientHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 48%] Building CXX object Modules/Filtering/ImageGradient/CMakeFiles/ITKImageGradientHeaderTest1.dir/test/ITKImageGradientHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientHeaderTest1.dir/test/ITKImageGradientHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/ImageGradient/test/ITKImageGradientHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/ImageGradient/test/ITKImageGradientHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/ImageGradient/include/itkGradientMagnitudeImageFilter.hxx:20: In file included from /<>/Modules/Filtering/ImageGradient/include/itkGradientMagnitudeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Linking CXX executable ../../../bin/ITKImageGradientHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageGradientHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageGradientHeaderTest1.dir/test/ITKImageGradientHeaderTest1.cxx.o -o ../../../bin/ITKImageGradientHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 49%] Built target ITKImageGradientHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageSources/test/CMakeFiles/ITKImageSourcesTestDriver.dir/build.make Modules/Filtering/ImageSources/test/CMakeFiles/ITKImageSourcesTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageSources/test /<>/BUILD /<>/BUILD/Modules/Filtering/ImageSources/test /<>/BUILD/Modules/Filtering/ImageSources/test/CMakeFiles/ITKImageSourcesTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageSourcesTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageSources/test/CMakeFiles/ITKImageSourcesTestDriver.dir/build.make Modules/Filtering/ImageSources/test/CMakeFiles/ITKImageSourcesTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/ImageSources/test/CMakeFiles/ITKImageSourcesTestDriver.dir/ITKImageSourcesTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsOpeningLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkStatisticsOpeningLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkStatisticsOpeningLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsRelabelLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/ITKSmoothingTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/Smoothing/test/ITKSmoothingTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/Smoothing/test/ITKSmoothingTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkBoxMeanImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsPositionLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkStatisticsPositionLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkStatisticsPositionLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/LabelMap/test/CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsUniqueLabelMapFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedMaurerDistanceMapImageFilterTest.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkSignedMaurerDistanceMapImageFilterTest.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkSignedMaurerDistanceMapImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkApproximateSignedDistanceMapImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsKeepNObjectsLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkStatisticsKeepNObjectsLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkStatisticsKeepNObjectsLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkIsoContourDistanceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkIsoContourDistanceImageFilterTest.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkIsoContourDistanceImageFilterTest.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkIsoContourDistanceImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DistanceMap/include/itkIsoContourDistanceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedMaurerDistanceMapImageFilterTest11.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkBoxMeanImageFilterTest.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkBoxMeanImageFilterTest.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkBoxMeanImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/Smoothing/include/itkBoxMeanImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkBoxSigmaImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkApproximateSignedDistanceMapImageFilterTest.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkApproximateSignedDistanceMapImageFilterTest.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkApproximateSignedDistanceMapImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DistanceMap/include/itkApproximateSignedDistanceMapImageFilter.h:21: In file included from /<>/Modules/Filtering/DistanceMap/include/itkFastChamferDistanceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/DistanceMap/test/CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedDanielssonDistanceMapImageFilterTest11.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/ITKImageGradientTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/ImageGradient/test/ITKImageGradientTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/ImageGradient/test/ITKImageGradientTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsRelabelImageFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkStatisticsRelabelImageFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkStatisticsRelabelImageFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedMaurerDistanceMapImageFilterTest11.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkSignedMaurerDistanceMapImageFilterTest11.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkSignedMaurerDistanceMapImageFilterTest11.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageSliceConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkVectorGradientMagnitudeImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkBoxSigmaImageFilterTest.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkBoxSigmaImageFilterTest.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkBoxSigmaImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/Smoothing/include/itkBoxSigmaImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkDiscreteGaussianImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkGradientImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkGradientImageFilterTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkVectorImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 49%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkVectorGradientMagnitudeImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedDanielssonDistanceMapImageFilterTest11.cxx.o -c /<>/Modules/Filtering/DistanceMap/test/itkSignedDanielssonDistanceMapImageFilterTest11.cxx In file included from /<>/Modules/Filtering/DistanceMap/test/itkSignedDanielssonDistanceMapImageFilterTest11.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageSliceConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 50%] Linking CXX executable ../../../../bin/ITKDistanceMapTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DistanceMap/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDistanceMapTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDistanceMapTestDriver.dir/ITKDistanceMapTestDriver.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkDanielssonDistanceMapImageFilterTest.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkDanielssonDistanceMapImageFilterTest1.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkDanielssonDistanceMapImageFilterTest2.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedDanielssonDistanceMapImageFilterTest.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedDanielssonDistanceMapImageFilterTest1.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedDanielssonDistanceMapImageFilterTest2.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkContourMeanDistanceImageFilterTest.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkContourDirectedMeanDistanceImageFilterTest.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkFastChamferDistanceImageFilterTest.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkHausdorffDistanceImageFilterTest.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkReflectiveImageRegionIteratorTest.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedMaurerDistanceMapImageFilterTest.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkApproximateSignedDistanceMapImageFilterTest.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkIsoContourDistanceImageFilterTest.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedMaurerDistanceMapImageFilterTest11.cxx.o CMakeFiles/ITKDistanceMapTestDriver.dir/itkSignedDanielssonDistanceMapImageFilterTest11.cxx.o -o ../../../../bin/ITKDistanceMapTestDriver ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 50%] Built target ITKDistanceMapTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/build.make Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFeature/test /<>/BUILD /<>/BUILD/Modules/Filtering/ImageFeature/test /<>/BUILD/Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFeatureTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/build.make Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 50%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/ITKImageFeatureTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsRelabelLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkStatisticsRelabelLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkStatisticsRelabelLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 50%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkZeroCrossingBasedEdgeDetectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageSources/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageSourcesTestDriver.dir/ITKImageSourcesTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/ImageSources/test/ITKImageSourcesTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/ImageSources/test/ITKImageSourcesTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 50%] Building CXX object Modules/Filtering/ImageSources/test/CMakeFiles/ITKImageSourcesTestDriver.dir/itkGaborKernelFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageSources/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageSourcesTestDriver.dir/itkGaborKernelFunctionTest.cxx.o -c /<>/Modules/Filtering/ImageSources/test/itkGaborKernelFunctionTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 50%] Building CXX object Modules/Filtering/ImageSources/test/CMakeFiles/ITKImageSourcesTestDriver.dir/itkGaborImageSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkVectorGradientMagnitudeImageFilterTest1.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkVectorGradientMagnitudeImageFilterTest1.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkVectorGradientMagnitudeImageFilterTest1.cxx:20: In file included from /<>/Modules/Filtering/ImageGradient/include/itkVectorGradientMagnitudeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 50%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkVectorGradientMagnitudeImageFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkGradientImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkGradientImageFilterTest2.cxx:20: In file included from /<>/Modules/Core/Common/include/itkVectorImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 50%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientMagnitudeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsUniqueLabelMapFilterTest1.cxx.o -c /<>/Modules/Filtering/LabelMap/test/itkStatisticsUniqueLabelMapFilterTest1.cxx In file included from /<>/Modules/Filtering/LabelMap/test/itkStatisticsUniqueLabelMapFilterTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 50%] Linking CXX executable ../../../../bin/ITKLabelMapTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkZeroCrossingBasedEdgeDetectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkZeroCrossingBasedEdgeDetectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkZeroCrossingBasedEdgeDetectionImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageFeature/include/itkZeroCrossingBasedEdgeDetectionImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 50%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkLaplacianImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkVectorGradientMagnitudeImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkVectorGradientMagnitudeImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkVectorGradientMagnitudeImageFilterTest2.cxx:20: In file included from /<>/Modules/Filtering/ImageGradient/include/itkVectorGradientMagnitudeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 50%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientMagnitudeRecursiveGaussianFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/LabelMap/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLabelMapTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKLabelMapTestDriver.dir/ITKLabelMapTestDriver.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkAggregateLabelMapFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeKeepNObjectsLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeLabelObjectAccessorsTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeOpeningLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributePositionLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeRelabelLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkAttributeUniqueLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkAutoCropLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkAutoCropLabelMapFilterTest2.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryFillholeImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryGrindPeakImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryImageToLabelMapFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryImageToLabelMapFilterTest2.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryImageToShapeLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryImageToStatisticsLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryReconstructionByDilationImageFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryReconstructionByErosionImageFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryReconstructionLabelMapFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryShapeKeepNObjectsImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryShapeOpeningImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryStatisticsKeepNObjectsImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkBinaryStatisticsOpeningImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkChangeLabelLabelMapFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkChangeRegionLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkConvertLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkConvertLabelMapFilterTest2.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkCropLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelImageToLabelMapFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelImageToShapeLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelImageToShapeLabelMapFilterTest2.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelImageToStatisticsLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapMaskImageFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapTest2.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapToAttributeImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapToBinaryImageFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelMapToLabelImageFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelObjectLineComparatorTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelObjectLineTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelObjectTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelSelectionLabelMapFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelShapeKeepNObjectsImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelShapeOpeningImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelStatisticsKeepNObjectsImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelStatisticsOpeningImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkLabelUniqueLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkMergeLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkObjectByObjectLabelMapFilterTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkPadLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkRegionFromReferenceLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkRelabelLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeKeepNObjectsLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeLabelObjectAccessorsTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeOpeningLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapePositionLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeRelabelImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeRelabelLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkShapeUniqueLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkShiftLabelObjectTest.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkShiftScaleLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsKeepNObjectsLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsOpeningLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsPositionLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsRelabelImageFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsRelabelLabelMapFilterTest1.cxx.o CMakeFiles/ITKLabelMapTestDriver.dir/itkStatisticsUniqueLabelMapFilterTest1.cxx.o -o ../../../../bin/ITKLabelMapTestDriver ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 50%] Built target ITKLabelMapTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFeature/CMakeFiles/ITKImageFeatureHeaderTest1.dir/build.make Modules/Filtering/ImageFeature/CMakeFiles/ITKImageFeatureHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 50%] Generating test/ITKImageFeatureHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKImageFeature /<>/Modules/Filtering/ImageFeature /<>/BUILD/Modules/Filtering/ImageFeature 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFeature /<>/BUILD /<>/BUILD/Modules/Filtering/ImageFeature /<>/BUILD/Modules/Filtering/ImageFeature/CMakeFiles/ITKImageFeatureHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFeatureHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFeature/CMakeFiles/ITKImageFeatureHeaderTest1.dir/build.make Modules/Filtering/ImageFeature/CMakeFiles/ITKImageFeatureHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 50%] Building CXX object Modules/Filtering/ImageFeature/CMakeFiles/ITKImageFeatureHeaderTest1.dir/test/ITKImageFeatureHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkDiscreteGaussianImageFilterTest2.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkDiscreteGaussianImageFilterTest2.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkDiscreteGaussianImageFilterTest2.cxx:20: In file included from /<>/Modules/Filtering/Smoothing/include/itkDiscreteGaussianImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkSmoothingRecursiveGaussianImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientMagnitudeImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkGradientMagnitudeImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkGradientMagnitudeImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageGradient/include/itkGradientMagnitudeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureHeaderTest1.dir/test/ITKImageFeatureHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/ImageFeature/test/ITKImageFeatureHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/ImageFeature/test/ITKImageFeatureHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHessian3DToVesselnessMeasureImageFilter.hxx:21: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHessian3DToVesselnessMeasureImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Linking CXX executable ../../../bin/ITKImageFeatureHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageFeatureHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageFeatureHeaderTest1.dir/test/ITKImageFeatureHeaderTest1.cxx.o -o ../../../bin/ITKImageFeatureHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 51%] Built target ITKImageFeatureHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/build.make Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizers/test /<>/BUILD /<>/BUILD/Modules/Numerics/Optimizers/test /<>/BUILD/Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizersTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/build.make Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/ITKOptimizersTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageSources/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageSourcesTestDriver.dir/itkGaborImageSourceTest.cxx.o -c /<>/Modules/Filtering/ImageSources/test/itkGaborImageSourceTest.cxx In file included from /<>/Modules/Filtering/ImageSources/test/itkGaborImageSourceTest.cxx:19: In file included from /<>/Modules/Filtering/ImageSources/include/itkGaborImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkGenerateImageSource.h:22: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageSources/test/CMakeFiles/ITKImageSourcesTestDriver.dir/itkGaussianImageSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientMagnitudeRecursiveGaussianFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkGradientMagnitudeRecursiveGaussianFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkGradientMagnitudeRecursiveGaussianFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGradient/include/itkGradientMagnitudeRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Core/ImageAdaptors/include/itkNthElementImageAdaptor.h:21: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkLaplacianImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkLaplacianImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkLaplacianImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageFeature/include/itkLaplacianImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkSobelEdgeDetectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterTest.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkGradientRecursiveGaussianFilterTest.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkGradientRecursiveGaussianFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGradient/include/itkGradientRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkVectorGradientMagnitudeImageFilterTest3.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkVectorGradientMagnitudeImageFilterTest3.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkVectorGradientMagnitudeImageFilterTest3.cxx:19: In file included from /<>/Modules/Filtering/ImageGradient/include/itkVectorGradientMagnitudeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkSmoothingRecursiveGaussianImageFilterTest.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkSmoothingRecursiveGaussianImageFilterTest.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkSmoothingRecursiveGaussianImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Smoothing/include/itkSmoothingRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkSmoothingRecursiveGaussianImageFilterOnVectorImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageSources/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageSourcesTestDriver.dir/itkGaussianImageSourceTest.cxx.o -c /<>/Modules/Filtering/ImageSources/test/itkGaussianImageSourceTest.cxx In file included from /<>/Modules/Filtering/ImageSources/test/itkGaussianImageSourceTest.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageSources/test/CMakeFiles/ITKImageSourcesTestDriver.dir/itkGridImageSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkGradientRecursiveGaussianFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkGradientRecursiveGaussianFilterTest2.cxx:22: In file included from /<>/Modules/Filtering/ImageGradient/include/itkGradientRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkDifferenceOfGaussiansGradientTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkSobelEdgeDetectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkSobelEdgeDetectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkSobelEdgeDetectionImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageFeature/include/itkSobelEdgeDetectionImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkHessian3DToVesselnessMeasureImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkSmoothingRecursiveGaussianImageFilterOnVectorImageTest.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkSmoothingRecursiveGaussianImageFilterOnVectorImageTest.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkSmoothingRecursiveGaussianImageFilterOnVectorImageTest.cxx:19: In file included from /<>/Modules/Filtering/Smoothing/include/itkSmoothingRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkSmoothingRecursiveGaussianImageFilterOnImageOfVectorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageSources/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageSourcesTestDriver.dir/itkGridImageSourceTest.cxx.o -c /<>/Modules/Filtering/ImageSources/test/itkGridImageSourceTest.cxx In file included from /<>/Modules/Filtering/ImageSources/test/itkGridImageSourceTest.cxx:18: In file included from /<>/Modules/Filtering/ImageSources/include/itkGridImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkGenerateImageSource.h:22: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageSources/test/CMakeFiles/ITKImageSourcesTestDriver.dir/itkPhysicalPointImageSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterTest4.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkGradientRecursiveGaussianFilterTest4.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkGradientRecursiveGaussianFilterTest4.cxx:19: In file included from /<>/Modules/Filtering/ImageGradient/include/itkGradientRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageGradient/test/CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterSpeedTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkDifferenceOfGaussiansGradientTest.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkDifferenceOfGaussiansGradientTest.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkDifferenceOfGaussiansGradientTest.cxx:24: In file included from /<>/Modules/Core/Common/include/itkSphereSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkInteriorExteriorSpatialFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkSmoothingRecursiveGaussianImageFilterOnImageAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkSmoothingRecursiveGaussianImageFilterOnImageOfVectorTest.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkSmoothingRecursiveGaussianImageFilterOnImageOfVectorTest.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkSmoothingRecursiveGaussianImageFilterOnImageOfVectorTest.cxx:19: In file included from /<>/Modules/Filtering/Smoothing/include/itkSmoothingRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkMeanImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkHessian3DToVesselnessMeasureImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkHessian3DToVesselnessMeasureImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkHessian3DToVesselnessMeasureImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHessianRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkHessianToObjectnessMeasureImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterSpeedTest.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkGradientRecursiveGaussianFilterSpeedTest.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkGradientRecursiveGaussianFilterSpeedTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGradient/include/itkGradientRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkHessianRecursiveGaussianFilterScaleSpaceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkMeanImageFilterTest.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkMeanImageFilterTest.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkMeanImageFilterTest.cxx:19: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkDiscreteGaussianImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkSmoothingRecursiveGaussianImageFilterOnImageAdaptorTest.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkSmoothingRecursiveGaussianImageFilterOnImageAdaptorTest.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkSmoothingRecursiveGaussianImageFilterOnImageAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/Smoothing/include/itkSmoothingRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkMedianImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageSources/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageSourcesTestDriver.dir/itkPhysicalPointImageSourceTest.cxx.o -c /<>/Modules/Filtering/ImageSources/test/itkPhysicalPointImageSourceTest.cxx In file included from /<>/Modules/Filtering/ImageSources/test/itkPhysicalPointImageSourceTest.cxx:19: In file included from /<>/Modules/Filtering/ImageSources/include/itkPhysicalPointImageSource.h:22: In file included from /<>/Modules/Filtering/ImageSources/include/itkGenerateImageSource.h:22: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 51%] Linking CXX executable ../../../../bin/ITKImageSourcesTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageSources/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageSourcesTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageSourcesTestDriver.dir/ITKImageSourcesTestDriver.cxx.o CMakeFiles/ITKImageSourcesTestDriver.dir/itkGaborKernelFunctionTest.cxx.o CMakeFiles/ITKImageSourcesTestDriver.dir/itkGaborImageSourceTest.cxx.o CMakeFiles/ITKImageSourcesTestDriver.dir/itkGaussianImageSourceTest.cxx.o CMakeFiles/ITKImageSourcesTestDriver.dir/itkGridImageSourceTest.cxx.o CMakeFiles/ITKImageSourcesTestDriver.dir/itkPhysicalPointImageSourceTest.cxx.o -o ../../../../bin/ITKImageSourcesTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 51%] Built target ITKImageSourcesTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/SignedDistanceFunction/test/CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/build.make Modules/Segmentation/SignedDistanceFunction/test/CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/SignedDistanceFunction/test /<>/BUILD /<>/BUILD/Modules/Segmentation/SignedDistanceFunction/test /<>/BUILD/Modules/Segmentation/SignedDistanceFunction/test/CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSignedDistanceFunctionTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/SignedDistanceFunction/test/CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/build.make Modules/Segmentation/SignedDistanceFunction/test/CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 51%] Building CXX object Modules/Segmentation/SignedDistanceFunction/test/CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/ITKSignedDistanceFunctionTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/ITKImageFeatureTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/ImageFeature/test/ITKImageFeatureTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/ImageFeature/test/ITKImageFeatureTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkHessianRecursiveGaussianFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterTest3.cxx.o -c /<>/Modules/Filtering/ImageGradient/test/itkGradientRecursiveGaussianFilterTest3.cxx In file included from /<>/Modules/Filtering/ImageGradient/test/itkGradientRecursiveGaussianFilterTest3.cxx:19: In file included from /<>/Modules/Filtering/ImageGradient/include/itkGradientRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Linking CXX executable ../../../../bin/ITKImageGradientTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkHessianToObjectnessMeasureImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkHessianToObjectnessMeasureImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkHessianToObjectnessMeasureImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHessianToObjectnessMeasureImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkHoughTransform2DCirclesImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkMedianImageFilterTest.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkMedianImageFilterTest.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkMedianImageFilterTest.cxx:19: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkRecursiveGaussianImageFiltersOnTensorsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageGradient/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageGradientTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageGradientTestDriver.dir/ITKImageGradientTestDriver.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientImageFilterTest.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientImageFilterTest2.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkVectorGradientMagnitudeImageFilterTest1.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkVectorGradientMagnitudeImageFilterTest2.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkVectorGradientMagnitudeImageFilterTest3.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientMagnitudeImageFilterTest.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientMagnitudeRecursiveGaussianFilterTest.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterTest.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterTest2.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterTest3.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterTest4.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkDifferenceOfGaussiansGradientTest.cxx.o CMakeFiles/ITKImageGradientTestDriver.dir/itkGradientRecursiveGaussianFilterSpeedTest.cxx.o -o ../../../../bin/ITKImageGradientTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 52%] Built target ITKImageGradientTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/build.make Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkHessianRecursiveGaussianFilterScaleSpaceTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkHessianRecursiveGaussianFilterScaleSpaceTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkHessianRecursiveGaussianFilterScaleSpaceTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHessianRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkHoughTransform2DLinesImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LevelSets/test /<>/BUILD /<>/BUILD/Modules/Segmentation/LevelSets/test /<>/BUILD/Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLevelSetsTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/build.make Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/ITKLevelSetsTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkDiscreteGaussianImageFilterTest.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkDiscreteGaussianImageFilterTest.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkDiscreteGaussianImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/Smoothing/include/itkDiscreteGaussianImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkRecursiveGaussianImageFiltersOnVectorImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkRecursiveGaussianImageFiltersOnTensorsTest.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkRecursiveGaussianImageFiltersOnTensorsTest.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkRecursiveGaussianImageFiltersOnTensorsTest.cxx:18: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkRecursiveGaussianImageFiltersTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkRecursiveGaussianImageFiltersOnVectorImageTest.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkRecursiveGaussianImageFiltersOnVectorImageTest.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkRecursiveGaussianImageFiltersOnVectorImageTest.cxx:18: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/Smoothing/test/CMakeFiles/ITKSmoothingTestDriver.dir/itkRecursiveGaussianScaleSpaceTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkHessianRecursiveGaussianFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkHessianRecursiveGaussianFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkHessianRecursiveGaussianFilterTest.cxx:18: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHessianRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkCannyEdgeDetectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkHoughTransform2DLinesImageTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkHoughTransform2DLinesImageTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkHoughTransform2DLinesImageTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHoughTransform2DLinesImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkBilateralImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkRecursiveGaussianScaleSpaceTest1.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkRecursiveGaussianScaleSpaceTest1.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkRecursiveGaussianScaleSpaceTest1.cxx:20: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkBilateralImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/Smoothing/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSmoothingTestDriver.dir/itkRecursiveGaussianImageFiltersTest.cxx.o -c /<>/Modules/Filtering/Smoothing/test/itkRecursiveGaussianImageFiltersTest.cxx In file included from /<>/Modules/Filtering/Smoothing/test/itkRecursiveGaussianImageFiltersTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Linking CXX executable ../../../../bin/ITKSmoothingTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Smoothing/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKSmoothingTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKSmoothingTestDriver.dir/ITKSmoothingTestDriver.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkBoxMeanImageFilterTest.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkBoxSigmaImageFilterTest.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkDiscreteGaussianImageFilterTest2.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkSmoothingRecursiveGaussianImageFilterTest.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkSmoothingRecursiveGaussianImageFilterOnVectorImageTest.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkSmoothingRecursiveGaussianImageFilterOnImageOfVectorTest.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkSmoothingRecursiveGaussianImageFilterOnImageAdaptorTest.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkMeanImageFilterTest.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkDiscreteGaussianImageFilterTest.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkMedianImageFilterTest.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkRecursiveGaussianImageFiltersOnTensorsTest.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkRecursiveGaussianImageFiltersOnVectorImageTest.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkRecursiveGaussianImageFiltersTest.cxx.o CMakeFiles/ITKSmoothingTestDriver.dir/itkRecursiveGaussianScaleSpaceTest1.cxx.o -o ../../../../bin/ITKSmoothingTestDriver ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 52%] Built target ITKSmoothingTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSetsHeaderTest2.dir/build.make Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSetsHeaderTest2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 52%] Generating test/ITKLevelSetsHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKLevelSets /<>/Modules/Segmentation/LevelSets /<>/BUILD/Modules/Segmentation/LevelSets 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LevelSets /<>/BUILD /<>/BUILD/Modules/Segmentation/LevelSets /<>/BUILD/Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSetsHeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLevelSetsHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSetsHeaderTest2.dir/build.make Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSetsHeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSetsHeaderTest2.dir/test/ITKLevelSetsHeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/ITKOptimizersTestDriver.cxx.o -c /<>/BUILD/Modules/Numerics/Optimizers/test/ITKOptimizersTestDriver.cxx In file included from /<>/BUILD/Modules/Numerics/Optimizers/test/ITKOptimizersTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkFRPROptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsHeaderTest2.dir/test/ITKLevelSetsHeaderTest2.cxx.o -c /<>/BUILD/Modules/Segmentation/LevelSets/test/ITKLevelSetsHeaderTest2.cxx In file included from /<>/BUILD/Modules/Segmentation/LevelSets/test/ITKLevelSetsHeaderTest2.cxx:23: In file included from /<>/Modules/Segmentation/LevelSets/include/itkUnsharpMaskLevelSetImageFilter.hxx:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkUnsharpMaskLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldFourthOrderLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNormalVectorDiffusionFunction.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNormalVectorFunctionBase.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceSparseImageFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Linking CXX executable ../../../bin/ITKLevelSetsHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLevelSetsHeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKLevelSetsHeaderTest2.dir/test/ITKLevelSetsHeaderTest2.cxx.o -o ../../../bin/ITKLevelSetsHeaderTest2 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 52%] Built target ITKLevelSetsHeaderTest2 make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkBilateralImageFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkFRPROptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkFRPROptimizerTest.cxx In file included from /<>/Modules/Numerics/Optimizers/test/itkFRPROptimizerTest.cxx:18: In file included from /<>/Modules/Numerics/Optimizers/include/itkFRPROptimizer.h:21: In file included from /<>/Modules/Numerics/Optimizers/include/itkPowellOptimizer.h:22: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkPowellOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkPowellOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkPowellOptimizerTest.cxx In file included from /<>/Modules/Numerics/Optimizers/test/itkPowellOptimizerTest.cxx:19: In file included from /<>/Modules/Numerics/Optimizers/include/itkPowellOptimizer.h:22: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkGradientDescentOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkBilateralImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkBilateralImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkBilateralImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageFeature/include/itkBilateralImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkGradientVectorFlowImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkGradientDescentOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkGradientDescentOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkVersorTransformOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkHoughTransform2DCirclesImageTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkHoughTransform2DCirclesImageTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkHoughTransform2DCirclesImageTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHoughTransform2DCirclesImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkSimpleContourExtractorImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkBilateralImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkBilateralImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkBilateralImageFilterTest2.cxx:20: In file included from /<>/Modules/Filtering/ImageFeature/include/itkBilateralImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkZeroCrossingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkCannyEdgeDetectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkCannyEdgeDetectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkCannyEdgeDetectionImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageFeature/include/itkCannyEdgeDetectionImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkCannyEdgeDetectionImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkVersorTransformOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkVersorTransformOptimizerTest.cxx In file included from /<>/Modules/Numerics/Optimizers/test/itkVersorTransformOptimizerTest.cxx:19: In file included from /<>/Modules/Numerics/Optimizers/include/itkVersorTransformOptimizer.h:22: In file included from /<>/Modules/Core/Common/include/itkVersor.h:21: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Numerics/Optimizers/test/itkVersorTransformOptimizerTest.cxx:20: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Numerics/Optimizers/test/itkVersorTransformOptimizerTest.cxx:177:13: note: in instantiation of template class 'itk::VersorTransform' requested here mutable TransformType::Pointer m_Transform; ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Numerics/Optimizers/test/itkVersorTransformOptimizerTest.cxx:20: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Numerics/Optimizers/test/itkVersorTransformOptimizerTest.cxx:177:13: note: in instantiation of template class 'itk::VersorTransform' requested here mutable TransformType::Pointer m_Transform; ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkSPSAOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkSPSAOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkSPSAOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkOptimizersHierarchyTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkBilateralImageFilterTest3.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkBilateralImageFilterTest3.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkBilateralImageFilterTest3.cxx:20: In file included from /<>/Modules/Filtering/ImageFeature/include/itkBilateralImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkDerivativeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkZeroCrossingImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkZeroCrossingImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkZeroCrossingImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageFeature/include/itkZeroCrossingImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkLaplacianRecursiveGaussianImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkOptimizersHierarchyTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkOptimizersHierarchyTest.cxx In file included from /<>/Modules/Numerics/Optimizers/test/itkOptimizersHierarchyTest.cxx:23: In file included from /<>/Modules/Numerics/Optimizers/include/itkVersorTransformOptimizer.h:22: In file included from /<>/Modules/Core/Common/include/itkVersor.h:21: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkExhaustiveOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkExhaustiveOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkExhaustiveOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkLBFGSBOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkSimpleContourExtractorImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkSimpleContourExtractorImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkSimpleContourExtractorImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkSimpleContourExtractorImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkMaskFeaturePointSelectionFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkGradientVectorFlowImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkGradientVectorFlowImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkGradientVectorFlowImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGradient/include/itkGradientRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkUnsharpMaskImageFilterTestSimple.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkLBFGSBOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkLBFGSBOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkConjugateGradientOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkConjugateGradientOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkConjugateGradientOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 52%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkLBFGSOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkLBFGSOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkLBFGSOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkCumulativeGaussianOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkCumulativeGaussianOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkCumulativeGaussianOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkRegularStepGradientDescentOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkRegularStepGradientDescentOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkRegularStepGradientDescentOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkLevenbergMarquardtOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkUnsharpMaskImageFilterTestSimple.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkUnsharpMaskImageFilterTestSimple.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkUnsharpMaskImageFilterTestSimple.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkUnsharpMaskImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Filtering/ImageFeature/test/CMakeFiles/ITKImageFeatureTestDriver.dir/itkUnsharpMaskImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkDerivativeImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkDerivativeImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkDerivativeImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageFeature/include/itkDerivativeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkVersorRigid3DTransformOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkCannyEdgeDetectionImageFilterTest2.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkCannyEdgeDetectionImageFilterTest2.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkCannyEdgeDetectionImageFilterTest2.cxx:20: In file included from /<>/Modules/Filtering/ImageFeature/include/itkCannyEdgeDetectionImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkAmoebaOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkLevenbergMarquardtOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkLevenbergMarquardtOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkOnePlusOneEvolutionaryOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/SignedDistanceFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/ITKSignedDistanceFunctionTestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/SignedDistanceFunction/test/ITKSignedDistanceFunctionTestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/SignedDistanceFunction/test/ITKSignedDistanceFunctionTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/SignedDistanceFunction/test/CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/itkSphereSignedDistanceFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkAmoebaOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkAmoebaOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkParticleSwarmOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkOnePlusOneEvolutionaryOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkOnePlusOneEvolutionaryOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Numerics/Optimizers/test/CMakeFiles/ITKOptimizersTestDriver.dir/itkInitializationBiasedParticleSwarmOptimizerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkMaskFeaturePointSelectionFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkMaskFeaturePointSelectionFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkMaskFeaturePointSelectionFilterTest.cxx:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/SignedDistanceFunction/test/CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/itkPCAShapeSignedDistanceFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/SignedDistanceFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/itkSphereSignedDistanceFunctionTest.cxx.o -c /<>/Modules/Segmentation/SignedDistanceFunction/test/itkSphereSignedDistanceFunctionTest.cxx In file included from /<>/Modules/Segmentation/SignedDistanceFunction/test/itkSphereSignedDistanceFunctionTest.cxx:19: In file included from /<>/Modules/Segmentation/SignedDistanceFunction/include/itkSphereSignedDistanceFunction.h:21: In file included from /<>/Modules/Segmentation/SignedDistanceFunction/include/itkShapeSignedDistanceFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSetsHeaderTest1.dir/build.make Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSetsHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 53%] Generating test/ITKLevelSetsHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKLevelSets /<>/Modules/Segmentation/LevelSets /<>/BUILD/Modules/Segmentation/LevelSets 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LevelSets /<>/BUILD /<>/BUILD/Modules/Segmentation/LevelSets /<>/BUILD/Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSetsHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLevelSetsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSetsHeaderTest1.dir/build.make Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSetsHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSetsHeaderTest1.dir/test/ITKLevelSetsHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkVersorRigid3DTransformOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkVersorRigid3DTransformOptimizerTest.cxx In file included from /<>/Modules/Numerics/Optimizers/test/itkVersorRigid3DTransformOptimizerTest.cxx:19: In file included from /<>/Modules/Numerics/Optimizers/include/itkVersorRigid3DTransformOptimizer.h:22: In file included from /<>/Modules/Core/Common/include/itkVersor.h:21: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Numerics/Optimizers/test/itkVersorRigid3DTransformOptimizerTest.cxx:20: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Numerics/Optimizers/test/itkVersorRigid3DTransformOptimizerTest.cxx:216:13: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here mutable TransformType::Pointer m_Transform; ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Numerics/Optimizers/test/itkVersorRigid3DTransformOptimizerTest.cxx:20: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Numerics/Optimizers/test/itkVersorRigid3DTransformOptimizerTest.cxx:216:13: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here mutable TransformType::Pointer m_Transform; ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/AntiAlias/test/CMakeFiles/ITKAntiAliasTestDriver.dir/build.make Modules/Filtering/AntiAlias/test/CMakeFiles/ITKAntiAliasTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/AntiAlias/test /<>/BUILD /<>/BUILD/Modules/Filtering/AntiAlias/test /<>/BUILD/Modules/Filtering/AntiAlias/test/CMakeFiles/ITKAntiAliasTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAntiAliasTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/AntiAlias/test/CMakeFiles/ITKAntiAliasTestDriver.dir/build.make Modules/Filtering/AntiAlias/test/CMakeFiles/ITKAntiAliasTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Filtering/AntiAlias/test/CMakeFiles/ITKAntiAliasTestDriver.dir/ITKAntiAliasTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/ITKLevelSetsTestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/LevelSets/test/ITKLevelSetsTestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/LevelSets/test/ITKLevelSetsTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkThresholdSegmentationLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkInitializationBiasedParticleSwarmOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkInitializationBiasedParticleSwarmOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkVectorThresholdSegmentationLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Numerics/Optimizers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKOptimizersTestDriver.dir/itkParticleSwarmOptimizerTest.cxx.o -c /<>/Modules/Numerics/Optimizers/test/itkParticleSwarmOptimizerTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Linking CXX executable ../../../../bin/ITKOptimizersTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Optimizers/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKOptimizersTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKOptimizersTestDriver.dir/ITKOptimizersTestDriver.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkFRPROptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkPowellOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkGradientDescentOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkVersorTransformOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkSPSAOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkOptimizersHierarchyTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkExhaustiveOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkLBFGSBOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkConjugateGradientOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkLBFGSOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkCumulativeGaussianOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkRegularStepGradientDescentOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkLevenbergMarquardtOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkVersorRigid3DTransformOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkAmoebaOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkOnePlusOneEvolutionaryOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkParticleSwarmOptimizerTest.cxx.o CMakeFiles/ITKOptimizersTestDriver.dir/itkInitializationBiasedParticleSwarmOptimizerTest.cxx.o -o ../../../../bin/ITKOptimizersTestDriver ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 53%] Built target ITKOptimizersTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/AntiAlias/CMakeFiles/ITKAntiAliasHeaderTest1.dir/build.make Modules/Filtering/AntiAlias/CMakeFiles/ITKAntiAliasHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 53%] Generating test/ITKAntiAliasHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AntiAlias && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKAntiAlias /<>/Modules/Filtering/AntiAlias /<>/BUILD/Modules/Filtering/AntiAlias 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/AntiAlias /<>/BUILD /<>/BUILD/Modules/Filtering/AntiAlias /<>/BUILD/Modules/Filtering/AntiAlias/CMakeFiles/ITKAntiAliasHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAntiAliasHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/AntiAlias/CMakeFiles/ITKAntiAliasHeaderTest1.dir/build.make Modules/Filtering/AntiAlias/CMakeFiles/ITKAntiAliasHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Filtering/AntiAlias/CMakeFiles/ITKAntiAliasHeaderTest1.dir/test/ITKAntiAliasHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsHeaderTest1.dir/test/ITKLevelSetsHeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/LevelSets/test/ITKLevelSetsHeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/LevelSets/test/ITKLevelSetsHeaderTest1.cxx:23: In file included from /<>/Modules/Segmentation/LevelSets/include/itkAnisotropicFourthOrderLevelSetImageFilter.hxx:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkAnisotropicFourthOrderLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldFourthOrderLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNormalVectorDiffusionFunction.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNormalVectorFunctionBase.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceSparseImageFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Linking CXX executable ../../../bin/ITKLevelSetsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLevelSetsHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKLevelSetsHeaderTest1.dir/test/ITKLevelSetsHeaderTest1.cxx.o -o ../../../bin/ITKLevelSetsHeaderTest1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 53%] Built target ITKLevelSetsHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Polynomials/test/CMakeFiles/ITKPolynomialsTestDriver.dir/build.make Modules/Numerics/Polynomials/test/CMakeFiles/ITKPolynomialsTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Polynomials/test /<>/BUILD /<>/BUILD/Modules/Numerics/Polynomials/test /<>/BUILD/Modules/Numerics/Polynomials/test/CMakeFiles/ITKPolynomialsTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPolynomialsTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Polynomials/test/CMakeFiles/ITKPolynomialsTestDriver.dir/build.make Modules/Numerics/Polynomials/test/CMakeFiles/ITKPolynomialsTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Numerics/Polynomials/test/CMakeFiles/ITKPolynomialsTestDriver.dir/ITKPolynomialsTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AntiAlias && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKAntiAliasHeaderTest1.dir/test/ITKAntiAliasHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/AntiAlias/test/ITKAntiAliasHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/AntiAlias/test/ITKAntiAliasHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/AntiAlias/include/itkAntiAliasBinaryImageFilter.hxx:21: In file included from /<>/Modules/Filtering/AntiAlias/include/itkAntiAliasBinaryImageFilter.h:20: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Linking CXX executable ../../../bin/ITKAntiAliasHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AntiAlias && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKAntiAliasHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKAntiAliasHeaderTest1.dir/test/ITKAntiAliasHeaderTest1.cxx.o -o ../../../bin/ITKAntiAliasHeaderTest1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 53%] Built target ITKAntiAliasHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BiasCorrection/test/CMakeFiles/ITKBiasCorrectionTestDriver.dir/build.make Modules/Filtering/BiasCorrection/test/CMakeFiles/ITKBiasCorrectionTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BiasCorrection/test /<>/BUILD /<>/BUILD/Modules/Filtering/BiasCorrection/test /<>/BUILD/Modules/Filtering/BiasCorrection/test/CMakeFiles/ITKBiasCorrectionTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBiasCorrectionTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BiasCorrection/test/CMakeFiles/ITKBiasCorrectionTestDriver.dir/build.make Modules/Filtering/BiasCorrection/test/CMakeFiles/ITKBiasCorrectionTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Filtering/BiasCorrection/test/CMakeFiles/ITKBiasCorrectionTestDriver.dir/ITKBiasCorrectionTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkLaplacianRecursiveGaussianImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkLaplacianRecursiveGaussianImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkLaplacianRecursiveGaussianImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkLaplacianRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Filtering/BiasCorrection/test/CMakeFiles/ITKBiasCorrectionTestDriver.dir/itkCompositeValleyFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/SignedDistanceFunction/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/itkPCAShapeSignedDistanceFunctionTest.cxx.o -c /<>/Modules/Segmentation/SignedDistanceFunction/test/itkPCAShapeSignedDistanceFunctionTest.cxx In file included from /<>/Modules/Segmentation/SignedDistanceFunction/test/itkPCAShapeSignedDistanceFunctionTest.cxx:19: In file included from /<>/Modules/Segmentation/SignedDistanceFunction/include/itkPCAShapeSignedDistanceFunction.h:21: In file included from /<>/Modules/Segmentation/SignedDistanceFunction/include/itkShapeSignedDistanceFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkSpatialFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Linking CXX executable ../../../../bin/ITKSignedDistanceFunctionTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/SignedDistanceFunction/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/ITKSignedDistanceFunctionTestDriver.cxx.o CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/itkSphereSignedDistanceFunctionTest.cxx.o CMakeFiles/ITKSignedDistanceFunctionTestDriver.dir/itkPCAShapeSignedDistanceFunctionTest.cxx.o -o ../../../../bin/ITKSignedDistanceFunctionTestDriver ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 53%] Built target ITKSignedDistanceFunctionTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/BioCell/test/CMakeFiles/ITKBioCellTestDriver.dir/build.make Modules/Segmentation/BioCell/test/CMakeFiles/ITKBioCellTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/BioCell/test /<>/BUILD /<>/BUILD/Modules/Segmentation/BioCell/test /<>/BUILD/Modules/Segmentation/BioCell/test/CMakeFiles/ITKBioCellTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBioCellTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/BioCell/test/CMakeFiles/ITKBioCellTestDriver.dir/build.make Modules/Segmentation/BioCell/test/CMakeFiles/ITKBioCellTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/BioCell/test/CMakeFiles/ITKBioCellTestDriver.dir/ITKBioCellTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BiasCorrection/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBiasCorrectionTestDriver.dir/itkCompositeValleyFunctionTest.cxx.o -c /<>/Modules/Filtering/BiasCorrection/test/itkCompositeValleyFunctionTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Filtering/BiasCorrection/test/CMakeFiles/ITKBiasCorrectionTestDriver.dir/itkMRIBiasFieldCorrectionFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKImageFeatureTestDriver.dir/itkUnsharpMaskImageFilterTest.cxx.o -c /<>/Modules/Filtering/ImageFeature/test/itkUnsharpMaskImageFilterTest.cxx In file included from /<>/Modules/Filtering/ImageFeature/test/itkUnsharpMaskImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkUnsharpMaskImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Linking CXX executable ../../../../bin/ITKImageFeatureTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/ImageFeature/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageFeatureTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKImageFeatureTestDriver.dir/ITKImageFeatureTestDriver.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkZeroCrossingBasedEdgeDetectionImageFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkLaplacianImageFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkSobelEdgeDetectionImageFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkHessian3DToVesselnessMeasureImageFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkHessianToObjectnessMeasureImageFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkHessianRecursiveGaussianFilterScaleSpaceTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkHessianRecursiveGaussianFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkHoughTransform2DCirclesImageTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkHoughTransform2DLinesImageTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkCannyEdgeDetectionImageFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkBilateralImageFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkBilateralImageFilterTest2.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkBilateralImageFilterTest3.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkGradientVectorFlowImageFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkSimpleContourExtractorImageFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkZeroCrossingImageFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkCannyEdgeDetectionImageFilterTest2.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkDerivativeImageFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkLaplacianRecursiveGaussianImageFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkMaskFeaturePointSelectionFilterTest.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkUnsharpMaskImageFilterTestSimple.cxx.o CMakeFiles/ITKImageFeatureTestDriver.dir/itkUnsharpMaskImageFilterTest.cxx.o -o ../../../../bin/ITKImageFeatureTestDriver -ldouble-conversion ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 53%] Built target ITKImageFeatureTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Classifiers/CMakeFiles/ITKClassifiersHeaderTest1.dir/build.make Modules/Segmentation/Classifiers/CMakeFiles/ITKClassifiersHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 53%] Generating test/ITKClassifiersHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKClassifiers /<>/Modules/Segmentation/Classifiers /<>/BUILD/Modules/Segmentation/Classifiers 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Classifiers /<>/BUILD /<>/BUILD/Modules/Segmentation/Classifiers /<>/BUILD/Modules/Segmentation/Classifiers/CMakeFiles/ITKClassifiersHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKClassifiersHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Classifiers/CMakeFiles/ITKClassifiersHeaderTest1.dir/build.make Modules/Segmentation/Classifiers/CMakeFiles/ITKClassifiersHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/Classifiers/CMakeFiles/ITKClassifiersHeaderTest1.dir/test/ITKClassifiersHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersHeaderTest1.dir/test/ITKClassifiersHeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/Classifiers/test/ITKClassifiersHeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/Classifiers/test/ITKClassifiersHeaderTest1.cxx:23: In file included from /<>/Modules/Segmentation/Classifiers/include/itkImageKmeansModelEstimator.hxx:21: In file included from /<>/Modules/Segmentation/Classifiers/include/itkImageKmeansModelEstimator.h:30: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Linking CXX executable ../../../bin/ITKClassifiersHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKClassifiersHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKClassifiersHeaderTest1.dir/test/ITKClassifiersHeaderTest1.cxx.o -o ../../../bin/ITKClassifiersHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 53%] Built target ITKClassifiersHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/build.make Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Classifiers/test /<>/BUILD /<>/BUILD/Modules/Segmentation/Classifiers/test /<>/BUILD/Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKClassifiersTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/build.make Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/ITKClassifiersTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkThresholdSegmentationLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkThresholdSegmentationLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkThresholdSegmentationLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkThresholdSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkAnisotropicFourthOrderLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BiasCorrection/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBiasCorrectionTestDriver.dir/itkMRIBiasFieldCorrectionFilterTest.cxx.o -c /<>/Modules/Filtering/BiasCorrection/test/itkMRIBiasFieldCorrectionFilterTest.cxx In file included from /<>/Modules/Filtering/BiasCorrection/test/itkMRIBiasFieldCorrectionFilterTest.cxx:21: In file included from /<>/Modules/Filtering/BiasCorrection/include/itkMRIBiasFieldCorrectionFilter.h:23: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Filtering/BiasCorrection/test/CMakeFiles/ITKBiasCorrectionTestDriver.dir/itkN4BiasFieldCorrectionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkVectorThresholdSegmentationLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkVectorThresholdSegmentationLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkVectorThresholdSegmentationLevelSetImageFilterTest.cxx:20: In file included from /<>/Modules/Segmentation/LevelSets/include/itkVectorThresholdSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkReinitializeLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkReinitializeLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkReinitializeLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkReinitializeLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkReinitializeLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkLevelSetNeighborhoodExtractor.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkLevelSet.h:21: In file included from /<>/Modules/Filtering/FastMarching/include/itkLevelSetNode.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkLevelSetVelocityNeighborhoodExtractorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkAnisotropicFourthOrderLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkAnisotropicFourthOrderLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkAnisotropicFourthOrderLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkAnisotropicFourthOrderLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldFourthOrderLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNormalVectorDiffusionFunction.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNormalVectorFunctionBase.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceSparseImageFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkIsotropicFourthOrderLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkLevelSetVelocityNeighborhoodExtractorTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkLevelSetVelocityNeighborhoodExtractorTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkLevelSetVelocityNeighborhoodExtractorTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkLevelSetVelocityNeighborhoodExtractor.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkLevelSetNeighborhoodExtractor.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkLevelSet.h:21: In file included from /<>/Modules/Filtering/FastMarching/include/itkLevelSetNode.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkGeodesicActiveContourLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AntiAlias/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKAntiAliasTestDriver.dir/ITKAntiAliasTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/AntiAlias/test/ITKAntiAliasTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/AntiAlias/test/ITKAntiAliasTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Filtering/AntiAlias/test/CMakeFiles/ITKAntiAliasTestDriver.dir/itkAntiAliasBinaryImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Polynomials/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Numerics/Polynomials/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPolynomialsTestDriver.dir/ITKPolynomialsTestDriver.cxx.o -c /<>/BUILD/Modules/Numerics/Polynomials/test/ITKPolynomialsTestDriver.cxx In file included from /<>/BUILD/Modules/Numerics/Polynomials/test/ITKPolynomialsTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Numerics/Polynomials/test/CMakeFiles/ITKPolynomialsTestDriver.dir/itkMultivariateLegendrePolynomialTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkIsotropicFourthOrderLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkIsotropicFourthOrderLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkIsotropicFourthOrderLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkIsotropicFourthOrderLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldFourthOrderLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNormalVectorDiffusionFunction.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNormalVectorFunctionBase.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceSparseImageFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkGeodesicActiveContourShapePriorLevelSetImageFilterTest_2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BiasCorrection/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBiasCorrectionTestDriver.dir/ITKBiasCorrectionTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/BiasCorrection/test/ITKBiasCorrectionTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/BiasCorrection/test/ITKBiasCorrectionTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkScalarImageKmeansImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Polynomials/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Numerics/Polynomials/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPolynomialsTestDriver.dir/itkMultivariateLegendrePolynomialTest.cxx.o -c /<>/Modules/Numerics/Polynomials/test/itkMultivariateLegendrePolynomialTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Linking CXX executable ../../../../bin/ITKPolynomialsTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Polynomials/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKPolynomialsTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKPolynomialsTestDriver.dir/ITKPolynomialsTestDriver.cxx.o CMakeFiles/ITKPolynomialsTestDriver.dir/itkMultivariateLegendrePolynomialTest.cxx.o -o ../../../../bin/ITKPolynomialsTestDriver ../../../../lib/libITKPolynomials-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 53%] Built target ITKPolynomialsTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Colormap/test/CMakeFiles/ITKColormapTestDriver.dir/build.make Modules/Filtering/Colormap/test/CMakeFiles/ITKColormapTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Colormap/test /<>/BUILD /<>/BUILD/Modules/Filtering/Colormap/test /<>/BUILD/Modules/Filtering/Colormap/test/CMakeFiles/ITKColormapTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKColormapTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Colormap/test/CMakeFiles/ITKColormapTestDriver.dir/build.make Modules/Filtering/Colormap/test/CMakeFiles/ITKColormapTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Filtering/Colormap/test/CMakeFiles/ITKColormapTestDriver.dir/ITKColormapTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/BioCell/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBioCellTestDriver.dir/ITKBioCellTestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/BioCell/test/ITKBioCellTestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/BioCell/test/ITKBioCellTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/BioCell/test/CMakeFiles/ITKBioCellTestDriver.dir/itkBioCellTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/BioCell/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBioCellTestDriver.dir/itkBioCellTest.cxx.o -c /<>/Modules/Segmentation/BioCell/test/itkBioCellTest.cxx In file included from /<>/Modules/Segmentation/BioCell/test/itkBioCellTest.cxx:21: In file included from /<>/Modules/Segmentation/BioCell/include/itkBioCell.h:21: In file included from /<>/Modules/Segmentation/BioCell/include/itkBioCellBase.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 53%] Building CXX object Modules/Segmentation/BioCell/test/CMakeFiles/ITKBioCellTestDriver.dir/itkBioGenomeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/BioCell/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBioCellTestDriver.dir/itkBioGenomeTest.cxx.o -c /<>/Modules/Segmentation/BioCell/test/itkBioGenomeTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/BioCell/test/CMakeFiles/ITKBioCellTestDriver.dir/itkBioCellularAggregateTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AntiAlias/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKAntiAliasTestDriver.dir/itkAntiAliasBinaryImageFilterTest.cxx.o -c /<>/Modules/Filtering/AntiAlias/test/itkAntiAliasBinaryImageFilterTest.cxx In file included from /<>/Modules/Filtering/AntiAlias/test/itkAntiAliasBinaryImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/AntiAlias/include/itkAntiAliasBinaryImageFilter.h:20: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Linking CXX executable ../../../../bin/ITKAntiAliasTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/AntiAlias/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKAntiAliasTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKAntiAliasTestDriver.dir/ITKAntiAliasTestDriver.cxx.o CMakeFiles/ITKAntiAliasTestDriver.dir/itkAntiAliasBinaryImageFilterTest.cxx.o -o ../../../../bin/ITKAntiAliasTestDriver ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 54%] Built target ITKAntiAliasTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/build.make Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/ITKClassifiersTestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/Classifiers/test/ITKClassifiersTestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/Classifiers/test/ITKClassifiersTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkSupervisedImageClassifierTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FFT/test /<>/BUILD /<>/BUILD/Modules/Filtering/FFT/test /<>/BUILD/Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFFTTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/build.make Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/ITKFFTTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkGeodesicActiveContourLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkGeodesicActiveContourLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkGeodesicActiveContourLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkGeodesicActiveContourLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkParallelSparseFieldLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkScalarImageKmeansImageFilterTest.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkScalarImageKmeansImageFilterTest.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkScalarImageKmeansImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkBayesianClassifierImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/BioCell/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBioCellTestDriver.dir/itkBioCellularAggregateTest.cxx.o -c /<>/Modules/Segmentation/BioCell/test/itkBioCellularAggregateTest.cxx In file included from /<>/Modules/Segmentation/BioCell/test/itkBioCellularAggregateTest.cxx:21: In file included from /<>/Modules/Segmentation/BioCell/include/itkBioCellularAggregate.h:21: In file included from /<>/Modules/Core/Common/include/itkDefaultDynamicMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/BioCell/test/CMakeFiles/ITKBioCellTestDriver.dir/itkBioGeneNetworkTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/BioCell/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBioCellTestDriver.dir/itkBioGeneNetworkTest.cxx.o -c /<>/Modules/Segmentation/BioCell/test/itkBioGeneNetworkTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/BioCell/test/CMakeFiles/ITKBioCellTestDriver.dir/itkBioGeneTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Segmentation/BioCell/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBioCellTestDriver.dir/itkBioGeneTest.cxx.o -c /<>/Modules/Segmentation/BioCell/test/itkBioGeneTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Linking CXX executable ../../../../bin/ITKBioCellTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/BioCell/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKBioCellTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKBioCellTestDriver.dir/ITKBioCellTestDriver.cxx.o CMakeFiles/ITKBioCellTestDriver.dir/itkBioCellTest.cxx.o CMakeFiles/ITKBioCellTestDriver.dir/itkBioGenomeTest.cxx.o CMakeFiles/ITKBioCellTestDriver.dir/itkBioCellularAggregateTest.cxx.o CMakeFiles/ITKBioCellTestDriver.dir/itkBioGeneNetworkTest.cxx.o CMakeFiles/ITKBioCellTestDriver.dir/itkBioGeneTest.cxx.o -o ../../../../bin/ITKBioCellTestDriver ../../../../lib/libITKBioCell-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 54%] Built target ITKBioCellTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/build.make Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Convolution/test /<>/BUILD /<>/BUILD/Modules/Filtering/Convolution/test /<>/BUILD/Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKConvolutionTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/build.make Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/ITKConvolutionTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkSupervisedImageClassifierTest.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkSupervisedImageClassifierTest.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkSupervisedImageClassifierTest.cxx:20: In file included from /<>/Modules/Segmentation/Classifiers/include/itkImageGaussianModelEstimator.h:30: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkKmeansModelEstimatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkKmeansModelEstimatorTest.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkKmeansModelEstimatorTest.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkKmeansModelEstimatorTest.cxx:21: In file included from /<>/Modules/Segmentation/Classifiers/include/itkImageKmeansModelEstimator.h:30: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkImageClassifierFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BiasCorrection/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKBiasCorrectionTestDriver.dir/itkN4BiasFieldCorrectionImageFilterTest.cxx.o -c /<>/Modules/Filtering/BiasCorrection/test/itkN4BiasFieldCorrectionImageFilterTest.cxx In file included from /<>/Modules/Filtering/BiasCorrection/test/itkN4BiasFieldCorrectionImageFilterTest.cxx:18: In file included from /<>/Modules/Filtering/ImageGrid/include/itkConstantPadImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkPadImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkPadImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Linking CXX executable ../../../../bin/ITKBiasCorrectionTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkGeodesicActiveContourShapePriorLevelSetImageFilterTest_2.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkGeodesicActiveContourShapePriorLevelSetImageFilterTest_2.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkGeodesicActiveContourShapePriorLevelSetImageFilterTest_2.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkGeodesicActiveContourShapePriorLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkShapePriorSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkShapeDetectionLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/BiasCorrection/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKBiasCorrectionTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKBiasCorrectionTestDriver.dir/ITKBiasCorrectionTestDriver.cxx.o CMakeFiles/ITKBiasCorrectionTestDriver.dir/itkCompositeValleyFunctionTest.cxx.o CMakeFiles/ITKBiasCorrectionTestDriver.dir/itkMRIBiasFieldCorrectionFilterTest.cxx.o CMakeFiles/ITKBiasCorrectionTestDriver.dir/itkN4BiasFieldCorrectionImageFilterTest.cxx.o -o ../../../../bin/ITKBiasCorrectionTestDriver ../../../../lib/libITKBiasCorrection-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 ../../../../lib/libITKPolynomials-4.12.so.1 -ldouble-conversion ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 54%] Built target ITKBiasCorrectionTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Convolution/CMakeFiles/ITKConvolutionHeaderTest1.dir/build.make Modules/Filtering/Convolution/CMakeFiles/ITKConvolutionHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 54%] Generating test/ITKConvolutionHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKConvolution /<>/Modules/Filtering/Convolution /<>/BUILD/Modules/Filtering/Convolution 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Convolution /<>/BUILD /<>/BUILD/Modules/Filtering/Convolution /<>/BUILD/Modules/Filtering/Convolution/CMakeFiles/ITKConvolutionHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKConvolutionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Convolution/CMakeFiles/ITKConvolutionHeaderTest1.dir/build.make Modules/Filtering/Convolution/CMakeFiles/ITKConvolutionHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Filtering/Convolution/CMakeFiles/ITKConvolutionHeaderTest1.dir/test/ITKConvolutionHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkParallelSparseFieldLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkParallelSparseFieldLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkParallelSparseFieldLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkLevelSetFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkNarrowBandThresholdSegmentationLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConvolutionHeaderTest1.dir/test/ITKConvolutionHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/Convolution/test/ITKConvolutionHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/Convolution/test/ITKConvolutionHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/Convolution/include/itkFFTConvolutionImageFilter.hxx:22: In file included from /<>/Modules/Filtering/Convolution/include/itkFFTConvolutionImageFilter.h:21: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Linking CXX executable ../../../bin/ITKConvolutionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKConvolutionHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKConvolutionHeaderTest1.dir/test/ITKConvolutionHeaderTest1.cxx.o -o ../../../bin/ITKConvolutionHeaderTest1 ../../../lib/libITKFFT-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 54%] Built target ITKConvolutionHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/build.make Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Deconvolution/test /<>/BUILD /<>/BUILD/Modules/Filtering/Deconvolution/test /<>/BUILD/Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeconvolutionTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/build.make Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/ITKDeconvolutionTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkImageClassifierFilterTest.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkImageClassifierFilterTest.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkImageClassifierFilterTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkImageClassifierFilter.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipFunctionBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest1.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest1.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest1.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkNarrowBandThresholdSegmentationLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkNarrowBandThresholdSegmentationLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkNarrowBandThresholdSegmentationLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNarrowBandThresholdSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNarrowBandLevelSetImageFilter.h:21: In file included from /<>/Modules/Numerics/NarrowBand/include/itkNarrowBandImageFilterBase.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkNarrowBandCurvesLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest2.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest2.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkBayesianClassifierImageFilterTest.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkBayesianClassifierImageFilterTest.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkBayesianClassifierImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkShapeDetectionLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkShapeDetectionLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkShapeDetectionLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkShapeDetectionLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkCollidingFrontsImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Colormap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKColormapTestDriver.dir/ITKColormapTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/Colormap/test/ITKColormapTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/Colormap/test/ITKColormapTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Filtering/Colormap/test/CMakeFiles/ITKColormapTestDriver.dir/itkCustomColormapFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest4.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest4.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest4.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest3.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest3.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest3.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Colormap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKColormapTestDriver.dir/itkCustomColormapFunctionTest.cxx.o -c /<>/Modules/Filtering/Colormap/test/itkCustomColormapFunctionTest.cxx In file included from /<>/Modules/Filtering/Colormap/test/itkCustomColormapFunctionTest.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Filtering/Colormap/test/CMakeFiles/ITKColormapTestDriver.dir/itkScalarToRGBColormapImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest5.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest5.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest5.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest7.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkCollidingFrontsImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkCollidingFrontsImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkCollidingFrontsImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkCollidingFrontsImageFilter.h:21: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingUpwindGradientImageFilter.h:21: In file included from /<>/Modules/Filtering/FastMarching/include/itkFastMarchingImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkGeodesicActiveContourShapePriorLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/ITKFFTTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/FFT/test/ITKFFTTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/FFT/test/ITKFFTTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkFFTShiftImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest6.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest6.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest6.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Segmentation/Classifiers/test/CMakeFiles/ITKClassifiersTestDriver.dir/itkScalarImageKmeansImageFilter3DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConvolutionTestDriver.dir/ITKConvolutionTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/Convolution/test/ITKConvolutionTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/Convolution/test/ITKConvolutionTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 54%] Building CXX object Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/itkConvolutionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkNarrowBandCurvesLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkNarrowBandCurvesLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkNarrowBandCurvesLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNarrowBandCurvesLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNarrowBandLevelSetImageFilter.h:21: In file included from /<>/Modules/Numerics/NarrowBand/include/itkNarrowBandImageFilterBase.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkLevelSetFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkFFTShiftImageFilterTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkFFTShiftImageFilterTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkFFTShiftImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkHalfToFullHermitianImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest7.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest7.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkSampleClassifierFilterTest7.cxx:21: In file included from /<>/Modules/Numerics/Statistics/include/itkPointSetToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkFullToHalfHermitianImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Colormap/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKColormapTestDriver.dir/itkScalarToRGBColormapImageFilterTest.cxx.o -c /<>/Modules/Filtering/Colormap/test/itkScalarToRGBColormapImageFilterTest.cxx In file included from /<>/Modules/Filtering/Colormap/test/itkScalarToRGBColormapImageFilterTest.cxx:19: In file included from /<>/Modules/Core/TestKernel/include/itkTestingHashImageFilter.h:23: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Linking CXX executable ../../../../bin/ITKColormapTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Colormap/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKColormapTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKColormapTestDriver.dir/ITKColormapTestDriver.cxx.o CMakeFiles/ITKColormapTestDriver.dir/itkCustomColormapFunctionTest.cxx.o CMakeFiles/ITKColormapTestDriver.dir/itkScalarToRGBColormapImageFilterTest.cxx.o -o ../../../../bin/ITKColormapTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 55%] Built target ITKColormapTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Deconvolution/CMakeFiles/ITKDeconvolutionHeaderTest1.dir/build.make Modules/Filtering/Deconvolution/CMakeFiles/ITKDeconvolutionHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 55%] Generating test/ITKDeconvolutionHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKDeconvolution /<>/Modules/Filtering/Deconvolution /<>/BUILD/Modules/Filtering/Deconvolution 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Deconvolution /<>/BUILD /<>/BUILD/Modules/Filtering/Deconvolution /<>/BUILD/Modules/Filtering/Deconvolution/CMakeFiles/ITKDeconvolutionHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeconvolutionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Deconvolution/CMakeFiles/ITKDeconvolutionHeaderTest1.dir/build.make Modules/Filtering/Deconvolution/CMakeFiles/ITKDeconvolutionHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Deconvolution/CMakeFiles/ITKDeconvolutionHeaderTest1.dir/test/ITKDeconvolutionHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeconvolutionHeaderTest1.dir/test/ITKDeconvolutionHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/Deconvolution/test/ITKDeconvolutionHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/Deconvolution/test/ITKDeconvolutionHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/Deconvolution/include/itkWienerDeconvolutionImageFilter.hxx:21: In file included from /<>/Modules/Filtering/Deconvolution/include/itkWienerDeconvolutionImageFilter.h:21: In file included from /<>/Modules/Filtering/Deconvolution/include/itkInverseDeconvolutionImageFilter.h:21: In file included from /<>/Modules/Filtering/Convolution/include/itkFFTConvolutionImageFilter.h:21: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Linking CXX executable ../../../bin/ITKDeconvolutionHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDeconvolutionHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDeconvolutionHeaderTest1.dir/test/ITKDeconvolutionHeaderTest1.cxx.o -o ../../../bin/ITKDeconvolutionHeaderTest1 ../../../lib/libITKFFT-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 55%] Built target ITKDeconvolutionHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/DeformableMesh/test/CMakeFiles/ITKDeformableMeshTestDriver.dir/build.make Modules/Segmentation/DeformableMesh/test/CMakeFiles/ITKDeformableMeshTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/DeformableMesh/test /<>/BUILD /<>/BUILD/Modules/Segmentation/DeformableMesh/test /<>/BUILD/Modules/Segmentation/DeformableMesh/test/CMakeFiles/ITKDeformableMeshTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeformableMeshTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/DeformableMesh/test/CMakeFiles/ITKDeformableMeshTestDriver.dir/build.make Modules/Segmentation/DeformableMesh/test/CMakeFiles/ITKDeformableMeshTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/DeformableMesh/test/CMakeFiles/ITKDeformableMeshTestDriver.dir/ITKDeformableMeshTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkLevelSetFunctionTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkLevelSetFunctionTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkLevelSetFunctionTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkLevelSetFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkExtensionVelocitiesImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Deconvolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeconvolutionTestDriver.dir/ITKDeconvolutionTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/Deconvolution/test/ITKDeconvolutionTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/Deconvolution/test/ITKDeconvolutionTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/itkInverseDeconvolutionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkHalfToFullHermitianImageFilterTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkHalfToFullHermitianImageFilterTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkHalfToFullHermitianImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkChangeInformationImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkFullToHalfHermitianImageFilterTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkFullToHalfHermitianImageFilterTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkFullToHalfHermitianImageFilterTest.cxx:21: In file included from /<>/Modules/Filtering/ImageGrid/include/itkChangeInformationImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkVnlRealFFTTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConvolutionTestDriver.dir/itkConvolutionImageFilterTest.cxx.o -c /<>/Modules/Filtering/Convolution/test/itkConvolutionImageFilterTest.cxx In file included from /<>/Modules/Filtering/Convolution/test/itkConvolutionImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilter.h:21: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/itkConvolutionImageFilterTestInt.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Segmentation/Classifiers/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKClassifiersTestDriver.dir/itkScalarImageKmeansImageFilter3DTest.cxx.o -c /<>/Modules/Segmentation/Classifiers/test/itkScalarImageKmeansImageFilter3DTest.cxx In file included from /<>/Modules/Segmentation/Classifiers/test/itkScalarImageKmeansImageFilter3DTest.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Linking CXX executable ../../../../bin/ITKClassifiersTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/Classifiers/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKClassifiersTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKClassifiersTestDriver.dir/ITKClassifiersTestDriver.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkScalarImageKmeansImageFilterTest.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkSupervisedImageClassifierTest.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkBayesianClassifierImageFilterTest.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkKmeansModelEstimatorTest.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkImageClassifierFilterTest.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest1.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest2.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest3.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest4.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest5.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest6.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkSampleClassifierFilterTest7.cxx.o CMakeFiles/ITKClassifiersTestDriver.dir/itkScalarImageKmeansImageFilter3DTest.cxx.o -o ../../../../bin/ITKClassifiersTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 55%] Built target ITKClassifiersTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/DeformableMesh/CMakeFiles/ITKDeformableMeshHeaderTest1.dir/build.make Modules/Segmentation/DeformableMesh/CMakeFiles/ITKDeformableMeshHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 55%] Generating test/ITKDeformableMeshHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/DeformableMesh && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKDeformableMesh /<>/Modules/Segmentation/DeformableMesh /<>/BUILD/Modules/Segmentation/DeformableMesh 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/DeformableMesh /<>/BUILD /<>/BUILD/Modules/Segmentation/DeformableMesh /<>/BUILD/Modules/Segmentation/DeformableMesh/CMakeFiles/ITKDeformableMeshHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeformableMeshHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/DeformableMesh/CMakeFiles/ITKDeformableMeshHeaderTest1.dir/build.make Modules/Segmentation/DeformableMesh/CMakeFiles/ITKDeformableMeshHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/DeformableMesh/CMakeFiles/ITKDeformableMeshHeaderTest1.dir/test/ITKDeformableMeshHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkGeodesicActiveContourShapePriorLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkGeodesicActiveContourShapePriorLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkGeodesicActiveContourShapePriorLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkGeodesicActiveContourShapePriorLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkShapePriorSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkCannySegmentationLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkExtensionVelocitiesImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkExtensionVelocitiesImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkExtensionVelocitiesImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkExtensionVelocitiesImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkLevelSetVelocityNeighborhoodExtractor.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkLevelSetNeighborhoodExtractor.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkLevelSet.h:21: In file included from /<>/Modules/Filtering/FastMarching/include/itkLevelSetNode.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkLevelSetNeighborhoodExtractorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/DeformableMesh && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeformableMeshHeaderTest1.dir/test/ITKDeformableMeshHeaderTest1.cxx.o -c /<>/BUILD/Modules/Segmentation/DeformableMesh/test/ITKDeformableMeshHeaderTest1.cxx In file included from /<>/BUILD/Modules/Segmentation/DeformableMesh/test/ITKDeformableMeshHeaderTest1.cxx:23: In file included from /<>/Modules/Segmentation/DeformableMesh/include/itkDeformableSimplexMesh3DGradientConstraintForceFilter.hxx:21: In file included from /<>/Modules/Segmentation/DeformableMesh/include/itkDeformableSimplexMesh3DGradientConstraintForceFilter.h:21: In file included from /<>/Modules/Segmentation/DeformableMesh/include/itkDeformableSimplexMesh3DFilter.h:32: In file included from /<>/Modules/Core/Mesh/include/itkSimplexMesh.h:21: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Linking CXX executable ../../../bin/ITKDeformableMeshHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/DeformableMesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDeformableMeshHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDeformableMeshHeaderTest1.dir/test/ITKDeformableMeshHeaderTest1.cxx.o -o ../../../bin/ITKDeformableMeshHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 55%] Built target ITKDeformableMeshHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Denoising/test/CMakeFiles/ITKDenoisingTestDriver.dir/build.make Modules/Filtering/Denoising/test/CMakeFiles/ITKDenoisingTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Denoising/test /<>/BUILD /<>/BUILD/Modules/Filtering/Denoising/test /<>/BUILD/Modules/Filtering/Denoising/test/CMakeFiles/ITKDenoisingTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDenoisingTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Denoising/test/CMakeFiles/ITKDenoisingTestDriver.dir/build.make Modules/Filtering/Denoising/test/CMakeFiles/ITKDenoisingTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Denoising/test/CMakeFiles/ITKDenoisingTestDriver.dir/ITKDenoisingTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkLevelSetNeighborhoodExtractorTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkLevelSetNeighborhoodExtractorTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkLevelSetNeighborhoodExtractorTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkLevelSetNeighborhoodExtractor.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkLevelSet.h:21: In file included from /<>/Modules/Filtering/FastMarching/include/itkLevelSetNode.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkShapePriorMAPCostFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkShapePriorMAPCostFunctionTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkShapePriorMAPCostFunctionTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkShapePriorMAPCostFunctionTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkShapePriorMAPCostFunction.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkShapePriorMAPCostFunctionBase.h:22: In file included from /<>/Modules/Filtering/FastMarching/include/itkLevelSet.h:21: In file included from /<>/Modules/Filtering/FastMarching/include/itkLevelSetNode.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkImplicitManifoldNormalVectorFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkVnlFFTTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkVnlFFTTest.cxx:20: In file included from /<>/Modules/Filtering/FFT/test/itkFFTTest.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkForwardInverseFFTImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConvolutionTestDriver.dir/itkConvolutionImageFilterTestInt.cxx.o -c /<>/Modules/Filtering/Convolution/test/itkConvolutionImageFilterTestInt.cxx In file included from /<>/Modules/Filtering/Convolution/test/itkConvolutionImageFilterTestInt.cxx:19: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilter.h:21: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/itkConvolutionImageFilterDeltaFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkVnlRealFFTTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkVnlRealFFTTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkVnlRealFFTTest.cxx:20: In file included from /<>/Modules/Filtering/FFT/test/itkRealFFTTest.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkComplexToComplexFFTImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Deconvolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkInverseDeconvolutionImageFilterTest.cxx.o -c /<>/Modules/Filtering/Deconvolution/test/itkInverseDeconvolutionImageFilterTest.cxx In file included from /<>/Modules/Filtering/Deconvolution/test/itkInverseDeconvolutionImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkConstantBoundaryCondition.h:22: In file included from /<>/Modules/Core/Common/include/itkImageBoundaryCondition.h:23: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/itkLandweberDeconvolutionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkImplicitManifoldNormalVectorFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkImplicitManifoldNormalVectorFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkImplicitManifoldNormalVectorFilterTest.cxx:20: In file included from /<>/Modules/Segmentation/LevelSets/include/itkImplicitManifoldNormalVectorFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkSparseFieldFourthOrderLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/DeformableMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeformableMeshTestDriver.dir/ITKDeformableMeshTestDriver.cxx.o -c /<>/BUILD/Modules/Segmentation/DeformableMesh/test/ITKDeformableMeshTestDriver.cxx In file included from /<>/BUILD/Modules/Segmentation/DeformableMesh/test/ITKDeformableMeshTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/DeformableMesh/test/CMakeFiles/ITKDeformableMeshTestDriver.dir/itkDeformableSimplexMesh3DFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConvolutionTestDriver.dir/itkConvolutionImageFilterDeltaFunctionTest.cxx.o -c /<>/Modules/Filtering/Convolution/test/itkConvolutionImageFilterDeltaFunctionTest.cxx In file included from /<>/Modules/Filtering/Convolution/test/itkConvolutionImageFilterDeltaFunctionTest.cxx:19: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilter.h:21: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/itkFFTConvolutionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkForwardInverseFFTImageFilterTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkForwardInverseFFTImageFilterTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkForwardInverseFFTImageFilterTest.cxx:18: In file included from /<>/Modules/Filtering/FFT/include/itkVnlForwardFFTImageFilter.h:21: In file included from /<>/Modules/Filtering/FFT/include/itkForwardFFTImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkVnlComplexToComplexFFTImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkSparseFieldFourthOrderLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkSparseFieldFourthOrderLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkSparseFieldFourthOrderLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldFourthOrderLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNormalVectorDiffusionFunction.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNormalVectorFunctionBase.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceSparseImageFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkLaplacianSegmentationLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkCannySegmentationLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkCannySegmentationLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkCannySegmentationLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkCannySegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkShapePriorSegmentationLevelSetFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Deconvolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkLandweberDeconvolutionImageFilterTest.cxx.o -c /<>/Modules/Filtering/Deconvolution/test/itkLandweberDeconvolutionImageFilterTest.cxx In file included from /<>/Modules/Filtering/Deconvolution/test/itkLandweberDeconvolutionImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Convolution/include/itkFFTConvolutionImageFilter.h:21: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/itkProjectedIterativeDeconvolutionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Denoising/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Denoising/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDenoisingTestDriver.dir/ITKDenoisingTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/Denoising/test/ITKDenoisingTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/Denoising/test/ITKDenoisingTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Denoising/test/CMakeFiles/ITKDenoisingTestDriver.dir/itkPatchBasedDenoisingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkShapePriorSegmentationLevelSetFunctionTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkShapePriorSegmentationLevelSetFunctionTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkShapePriorSegmentationLevelSetFunctionTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkShapePriorSegmentationLevelSetFunction.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetFunction.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkLevelSetFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkGeodesicActiveContourLevelSetImageFilterZeroSigmaTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkComplexToComplexFFTImageFilterTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkComplexToComplexFFTImageFilterTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkComplexToComplexFFTImageFilterTest.cxx:35: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkUnsharpMaskLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkLaplacianSegmentationLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkLaplacianSegmentationLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkLaplacianSegmentationLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkLaplacianSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkCurvesLevelSetImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/DeformableMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeformableMeshTestDriver.dir/itkDeformableSimplexMesh3DFilterTest.cxx.o -c /<>/Modules/Segmentation/DeformableMesh/test/itkDeformableSimplexMesh3DFilterTest.cxx In file included from /<>/Modules/Segmentation/DeformableMesh/test/itkDeformableSimplexMesh3DFilterTest.cxx:21: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/DeformableMesh/test/CMakeFiles/ITKDeformableMeshTestDriver.dir/itkDeformableSimplexMesh3DBalloonForceFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConvolutionTestDriver.dir/itkFFTConvolutionImageFilterTest.cxx.o -c /<>/Modules/Filtering/Convolution/test/itkFFTConvolutionImageFilterTest.cxx In file included from /<>/Modules/Filtering/Convolution/test/itkFFTConvolutionImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageGrid/include/itkChangeInformationImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/itkFFTConvolutionImageFilterTestInt.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Deconvolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkProjectedIterativeDeconvolutionImageFilterTest.cxx.o -c /<>/Modules/Filtering/Deconvolution/test/itkProjectedIterativeDeconvolutionImageFilterTest.cxx In file included from /<>/Modules/Filtering/Deconvolution/test/itkProjectedIterativeDeconvolutionImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/itkProjectedLandweberDeconvolutionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkUnsharpMaskLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkUnsharpMaskLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkUnsharpMaskLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkUnsharpMaskLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldFourthOrderLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNormalVectorDiffusionFunction.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkNormalVectorFunctionBase.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceSparseImageFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/LevelSets/test/CMakeFiles/ITKLevelSetsTestDriver.dir/itkCurvesLevelSetImageFilterZeroSigmaTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkVnlComplexToComplexFFTImageFilterTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkVnlComplexToComplexFFTImageFilterTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkVnlComplexToComplexFFTImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkFFTPadImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkGeodesicActiveContourLevelSetImageFilterZeroSigmaTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkGeodesicActiveContourLevelSetImageFilterZeroSigmaTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkGeodesicActiveContourLevelSetImageFilterZeroSigmaTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkGeodesicActiveContourLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkFFTWF_FFTTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConvolutionTestDriver.dir/itkFFTConvolutionImageFilterTestInt.cxx.o -c /<>/Modules/Filtering/Convolution/test/itkFFTConvolutionImageFilterTestInt.cxx In file included from /<>/Modules/Filtering/Convolution/test/itkFFTConvolutionImageFilterTestInt.cxx:19: In file included from /<>/Modules/Filtering/Convolution/include/itkFFTConvolutionImageFilter.h:21: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/itkFFTConvolutionImageFilterDeltaFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/DeformableMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeformableMeshTestDriver.dir/itkDeformableSimplexMesh3DBalloonForceFilterTest.cxx.o -c /<>/Modules/Segmentation/DeformableMesh/test/itkDeformableSimplexMesh3DBalloonForceFilterTest.cxx In file included from /<>/Modules/Segmentation/DeformableMesh/test/itkDeformableSimplexMesh3DBalloonForceFilterTest.cxx:21: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/DeformableMesh/test/CMakeFiles/ITKDeformableMeshTestDriver.dir/itkDeformableSimplexMesh3DGradientConstraintForceFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkCurvesLevelSetImageFilterTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkCurvesLevelSetImageFilterTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkCurvesLevelSetImageFilterTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkCurvesLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Segmentation/DeformableMesh/test/CMakeFiles/ITKDeformableMeshTestDriver.dir/itkSimplexMeshWithFloatCoordRepTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkFFTPadImageFilterTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkFFTPadImageFilterTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkFFTPadImageFilterTest.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkFFTWF_RealFFTTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/DeformableMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeformableMeshTestDriver.dir/itkSimplexMeshWithFloatCoordRepTest.cxx.o -c /<>/Modules/Segmentation/DeformableMesh/test/itkSimplexMeshWithFloatCoordRepTest.cxx In file included from /<>/Modules/Segmentation/DeformableMesh/test/itkSimplexMeshWithFloatCoordRepTest.cxx:18: In file included from /<>/Modules/Core/Common/include/itkDefaultDynamicMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTWF_FFTTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkFFTWF_FFTTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkFFTWF_FFTTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkFFTWF_FFTTest.cxx:20: In file included from /<>/Modules/Filtering/FFT/test/itkFFTTest.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTWF_RealFFTTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKLevelSetsTestDriver.dir/itkCurvesLevelSetImageFilterZeroSigmaTest.cxx.o -c /<>/Modules/Segmentation/LevelSets/test/itkCurvesLevelSetImageFilterZeroSigmaTest.cxx In file included from /<>/Modules/Segmentation/LevelSets/test/itkCurvesLevelSetImageFilterZeroSigmaTest.cxx:19: In file included from /<>/Modules/Segmentation/LevelSets/include/itkCurvesLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Linking CXX executable ../../../../bin/ITKLevelSetsTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/LevelSets/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLevelSetsTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKLevelSetsTestDriver.dir/ITKLevelSetsTestDriver.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkThresholdSegmentationLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkVectorThresholdSegmentationLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkAnisotropicFourthOrderLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkReinitializeLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkLevelSetVelocityNeighborhoodExtractorTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkIsotropicFourthOrderLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkGeodesicActiveContourLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkGeodesicActiveContourShapePriorLevelSetImageFilterTest_2.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkParallelSparseFieldLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkShapeDetectionLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkNarrowBandThresholdSegmentationLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkNarrowBandCurvesLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkCollidingFrontsImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkGeodesicActiveContourShapePriorLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkLevelSetFunctionTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkExtensionVelocitiesImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkCannySegmentationLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkLevelSetNeighborhoodExtractorTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkShapePriorMAPCostFunctionTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkImplicitManifoldNormalVectorFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkSparseFieldFourthOrderLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkLaplacianSegmentationLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkShapePriorSegmentationLevelSetFunctionTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkGeodesicActiveContourLevelSetImageFilterZeroSigmaTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkUnsharpMaskLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkCurvesLevelSetImageFilterTest.cxx.o CMakeFiles/ITKLevelSetsTestDriver.dir/itkCurvesLevelSetImageFilterZeroSigmaTest.cxx.o -o ../../../../bin/ITKLevelSetsTestDriver ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkFFTWF_RealFFTTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkFFTWF_RealFFTTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkFFTWF_RealFFTTest.cxx:19: In file included from /<>/Modules/Filtering/FFT/test/itkRealFFTTest.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 55%] Built target ITKLevelSetsTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Denoising/CMakeFiles/ITKDenoisingHeaderTest1.dir/build.make Modules/Filtering/Denoising/CMakeFiles/ITKDenoisingHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkFFTWD_FFTTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Generating test/ITKDenoisingHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Denoising && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKDenoising /<>/Modules/Filtering/Denoising /<>/BUILD/Modules/Filtering/Denoising 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Denoising /<>/BUILD /<>/BUILD/Modules/Filtering/Denoising /<>/BUILD/Modules/Filtering/Denoising/CMakeFiles/ITKDenoisingHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDenoisingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Denoising/CMakeFiles/ITKDenoisingHeaderTest1.dir/build.make Modules/Filtering/Denoising/CMakeFiles/ITKDenoisingHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Denoising/CMakeFiles/ITKDenoisingHeaderTest1.dir/test/ITKDenoisingHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Deconvolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkProjectedLandweberDeconvolutionImageFilterTest.cxx.o -c /<>/Modules/Filtering/Deconvolution/test/itkProjectedLandweberDeconvolutionImageFilterTest.cxx In file included from /<>/Modules/Filtering/Deconvolution/test/itkProjectedLandweberDeconvolutionImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/itkRichardsonLucyDeconvolutionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConvolutionTestDriver.dir/itkFFTConvolutionImageFilterDeltaFunctionTest.cxx.o -c /<>/Modules/Filtering/Convolution/test/itkFFTConvolutionImageFilterDeltaFunctionTest.cxx In file included from /<>/Modules/Filtering/Convolution/test/itkFFTConvolutionImageFilterDeltaFunctionTest.cxx:19: In file included from /<>/Modules/Filtering/Convolution/include/itkFFTConvolutionImageFilter.h:21: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Building CXX object Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/itkNormalizedCorrelationImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Denoising && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDenoisingHeaderTest1.dir/test/ITKDenoisingHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/Denoising/test/ITKDenoisingHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/Denoising/test/ITKDenoisingHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/Denoising/include/itkPatchBasedDenoisingBaseImageFilter.hxx:21: In file included from /<>/Modules/Filtering/Denoising/include/itkPatchBasedDenoisingBaseImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 55%] Linking CXX executable ../../../bin/ITKDenoisingHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Denoising && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDenoisingHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDenoisingHeaderTest1.dir/test/ITKDenoisingHeaderTest1.cxx.o -o ../../../bin/ITKDenoisingHeaderTest1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 55%] Built target ITKDenoisingHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/build.make Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DisplacementField/test /<>/BUILD /<>/BUILD/Modules/Filtering/DisplacementField/test /<>/BUILD/Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDisplacementFieldTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/build.make Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/ITKDisplacementFieldTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTWF_FFTTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkVnlFFTWF_FFTTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkVnlFFTWF_FFTTest.cxx:20: In file included from /<>/Modules/Filtering/FFT/test/itkFFTTest.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkFFTWD_RealFFTTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/DeformableMesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeformableMeshTestDriver.dir/itkDeformableSimplexMesh3DGradientConstraintForceFilterTest.cxx.o -c /<>/Modules/Segmentation/DeformableMesh/test/itkDeformableSimplexMesh3DGradientConstraintForceFilterTest.cxx In file included from /<>/Modules/Segmentation/DeformableMesh/test/itkDeformableSimplexMesh3DGradientConstraintForceFilterTest.cxx:21: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Linking CXX executable ../../../../bin/ITKDeformableMeshTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Segmentation/DeformableMesh/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDeformableMeshTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDeformableMeshTestDriver.dir/ITKDeformableMeshTestDriver.cxx.o CMakeFiles/ITKDeformableMeshTestDriver.dir/itkDeformableSimplexMesh3DFilterTest.cxx.o CMakeFiles/ITKDeformableMeshTestDriver.dir/itkDeformableSimplexMesh3DBalloonForceFilterTest.cxx.o CMakeFiles/ITKDeformableMeshTestDriver.dir/itkDeformableSimplexMesh3DGradientConstraintForceFilterTest.cxx.o CMakeFiles/ITKDeformableMeshTestDriver.dir/itkSimplexMeshWithFloatCoordRepTest.cxx.o -o ../../../../bin/ITKDeformableMeshTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 56%] Built target ITKDeformableMeshTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DisplacementField/CMakeFiles/ITKDisplacementFieldHeaderTest1.dir/build.make Modules/Filtering/DisplacementField/CMakeFiles/ITKDisplacementFieldHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 56%] Generating test/ITKDisplacementFieldHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKDisplacementField /<>/Modules/Filtering/DisplacementField /<>/BUILD/Modules/Filtering/DisplacementField 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DisplacementField /<>/BUILD /<>/BUILD/Modules/Filtering/DisplacementField /<>/BUILD/Modules/Filtering/DisplacementField/CMakeFiles/ITKDisplacementFieldHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDisplacementFieldHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DisplacementField/CMakeFiles/ITKDisplacementFieldHeaderTest1.dir/build.make Modules/Filtering/DisplacementField/CMakeFiles/ITKDisplacementFieldHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/DisplacementField/CMakeFiles/ITKDisplacementFieldHeaderTest1.dir/test/ITKDisplacementFieldHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTWF_RealFFTTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkVnlFFTWF_RealFFTTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkVnlFFTWF_RealFFTTest.cxx:20: In file included from /<>/Modules/Filtering/FFT/test/itkRealFFTTest.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTWD_FFTTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldHeaderTest1.dir/test/ITKDisplacementFieldHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/DisplacementField/test/ITKDisplacementFieldHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/DisplacementField/test/ITKDisplacementFieldHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/DisplacementField/include/itkVelocityFieldTransform.hxx:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkVelocityFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Linking CXX executable ../../../bin/ITKDisplacementFieldHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDisplacementFieldHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDisplacementFieldHeaderTest1.dir/test/ITKDisplacementFieldHeaderTest1.cxx.o -o ../../../bin/ITKDisplacementFieldHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 56%] Built target ITKDisplacementFieldHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/build.make Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/V3Compatibility/test /<>/BUILD /<>/BUILD/Modules/Compatibility/V3Compatibility/test /<>/BUILD/Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKV3CompatibilityTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/build.make Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/ITKV3CompatibilityTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkFFTWD_FFTTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkFFTWD_FFTTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkFFTWD_FFTTest.cxx:20: In file included from /<>/Modules/Filtering/FFT/test/itkFFTTest.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTWD_RealFFTTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkFFTWD_RealFFTTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkFFTWD_RealFFTTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkFFTWD_RealFFTTest.cxx:20: In file included from /<>/Modules/Filtering/FFT/test/itkRealFFTTest.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/FFT/test/CMakeFiles/ITKFFTTestDriver.dir/itkFFTWComplexToComplexFFTImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConvolutionTestDriver.dir/itkNormalizedCorrelationImageFilterTest.cxx.o -c /<>/Modules/Filtering/Convolution/test/itkNormalizedCorrelationImageFilterTest.cxx In file included from /<>/Modules/Filtering/Convolution/test/itkNormalizedCorrelationImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/Convolution/include/itkNormalizedCorrelationImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkNeighborhoodOperatorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/itkMaskedFFTNormalizedCorrelationImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTWD_FFTTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkVnlFFTWD_FFTTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkVnlFFTWD_FFTTest.cxx:20: In file included from /<>/Modules/Filtering/FFT/test/itkFFTTest.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/Convolution/test/CMakeFiles/ITKConvolutionTestDriver.dir/itkFFTNormalizedCorrelationImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTWD_RealFFTTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkVnlFFTWD_RealFFTTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkVnlFFTWD_RealFFTTest.cxx:20: In file included from /<>/Modules/Filtering/FFT/test/itkRealFFTTest.h:25: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkDeformationFieldSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Deconvolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkRichardsonLucyDeconvolutionImageFilterTest.cxx.o -c /<>/Modules/Filtering/Deconvolution/test/itkRichardsonLucyDeconvolutionImageFilterTest.cxx In file included from /<>/Modules/Filtering/Deconvolution/test/itkRichardsonLucyDeconvolutionImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Convolution/include/itkFFTConvolutionImageFilter.h:21: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/itkTikhonovDeconvolutionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkDeformationFieldSourceTest.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkDeformationFieldSourceTest.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkDeformationFieldSourceTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkDeformationFieldSourceTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkDeformationFieldSource.h:143:16: warning: 'GenerateOutputInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateOutputInformation(); ^ /<>/Modules/Compatibility/V3Compatibility/test/itkDeformationFieldSourceTest.cxx:50:3: note: in instantiation of template class 'itk::DeformationFieldSource, 2> >' requested here FilterType::Pointer filter = FilterType::New(); ^ /<>/Modules/Core/Common/include/itkProcessObject.h:741:16: note: overridden virtual function is here virtual void GenerateOutputInformation(); ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkDeformationFieldSourceTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkDeformationFieldSource.h:146:20: warning: 'GetMTime' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] ModifiedTimeType GetMTime() const; ^ /<>/Modules/Core/Common/include/itkObject.h:94:28: note: overridden virtual function is here virtual ModifiedTimeType GetMTime() const; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkDeformationFieldSourceTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkDeformationFieldSource.h:157:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void GenerateData(); ^ /<>/Modules/Core/Common/include/itkImageSource.h:238:16: note: overridden virtual function is here virtual void GenerateData() ITK_OVERRIDE; ^ 4 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkExponentialDeformationFieldImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkExponentialDeformationFieldImageFilterTest.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkExponentialDeformationFieldImageFilterTest.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkExponentialDeformationFieldImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkExponentialDeformationFieldImageFilterTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkExponentialDeformationFieldImageFilter.h:148:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void GenerateData(); ^ /<>/Modules/Compatibility/V3Compatibility/test/itkExponentialDeformationFieldImageFilterTest.cxx:94:3: note: in instantiation of template class 'itk::ExponentialDeformationFieldImageFilter, 3>, itk::Image, 3> >' requested here FilterType::Pointer filter = FilterType::New(); ^ /<>/Modules/Core/Common/include/itkImageSource.h:238:16: note: overridden virtual function is here virtual void GenerateData() ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/itkWienerDeconvolutionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConvolutionTestDriver.dir/itkFFTNormalizedCorrelationImageFilterTest.cxx.o -c /<>/Modules/Filtering/Convolution/test/itkFFTNormalizedCorrelationImageFilterTest.cxx In file included from /<>/Modules/Filtering/Convolution/test/itkFFTNormalizedCorrelationImageFilterTest.cxx:18: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/Deconvolution/test/CMakeFiles/ITKDeconvolutionTestDriver.dir/itkParametricBlindLeastSquaresDeconvolutionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKConvolutionTestDriver.dir/itkMaskedFFTNormalizedCorrelationImageFilterTest.cxx.o -c /<>/Modules/Filtering/Convolution/test/itkMaskedFFTNormalizedCorrelationImageFilterTest.cxx In file included from /<>/Modules/Filtering/Convolution/test/itkMaskedFFTNormalizedCorrelationImageFilterTest.cxx:18: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Linking CXX executable ../../../../bin/ITKConvolutionTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Convolution/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKConvolutionTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKConvolutionTestDriver.dir/ITKConvolutionTestDriver.cxx.o CMakeFiles/ITKConvolutionTestDriver.dir/itkConvolutionImageFilterTest.cxx.o CMakeFiles/ITKConvolutionTestDriver.dir/itkConvolutionImageFilterTestInt.cxx.o CMakeFiles/ITKConvolutionTestDriver.dir/itkConvolutionImageFilterDeltaFunctionTest.cxx.o CMakeFiles/ITKConvolutionTestDriver.dir/itkFFTConvolutionImageFilterTest.cxx.o CMakeFiles/ITKConvolutionTestDriver.dir/itkFFTConvolutionImageFilterTestInt.cxx.o CMakeFiles/ITKConvolutionTestDriver.dir/itkFFTConvolutionImageFilterDeltaFunctionTest.cxx.o CMakeFiles/ITKConvolutionTestDriver.dir/itkNormalizedCorrelationImageFilterTest.cxx.o CMakeFiles/ITKConvolutionTestDriver.dir/itkMaskedFFTNormalizedCorrelationImageFilterTest.cxx.o CMakeFiles/ITKConvolutionTestDriver.dir/itkFFTNormalizedCorrelationImageFilterTest.cxx.o -o ../../../../bin/ITKConvolutionTestDriver ../../../../lib/libITKFFT-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 56%] Built target ITKConvolutionTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/V3Compatibility/CMakeFiles/ITKV3CompatibilityHeaderTest1.dir/build.make Modules/Compatibility/V3Compatibility/CMakeFiles/ITKV3CompatibilityHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 56%] Generating test/ITKV3CompatibilityHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKV3Compatibility /<>/Modules/Compatibility/V3Compatibility /<>/BUILD/Modules/Compatibility/V3Compatibility 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/V3Compatibility /<>/BUILD /<>/BUILD/Modules/Compatibility/V3Compatibility /<>/BUILD/Modules/Compatibility/V3Compatibility/CMakeFiles/ITKV3CompatibilityHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKV3CompatibilityHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/V3Compatibility/CMakeFiles/ITKV3CompatibilityHeaderTest1.dir/build.make Modules/Compatibility/V3Compatibility/CMakeFiles/ITKV3CompatibilityHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/CMakeFiles/ITKV3CompatibilityHeaderTest1.dir/test/ITKV3CompatibilityHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/ImageCompare/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFFTTestDriver.dir/itkFFTWComplexToComplexFFTImageFilterTest.cxx.o -c /<>/Modules/Filtering/FFT/test/itkFFTWComplexToComplexFFTImageFilterTest.cxx In file included from /<>/Modules/Filtering/FFT/test/itkFFTWComplexToComplexFFTImageFilterTest.cxx:35: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Linking CXX executable ../../../../bin/ITKFFTTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityHeaderTest1.dir/test/ITKV3CompatibilityHeaderTest1.cxx.o -c /<>/BUILD/Modules/Compatibility/V3Compatibility/test/ITKV3CompatibilityHeaderTest1.cxx In file included from /<>/BUILD/Modules/Compatibility/V3Compatibility/test/ITKV3CompatibilityHeaderTest1.cxx:23: In file included from /<>/Modules/Compatibility/V3Compatibility/include/itkTransformToDeformationFieldSource.hxx:21: In file included from /<>/Modules/Compatibility/V3Compatibility/include/itkTransformToDeformationFieldSource.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/BUILD/Modules/Compatibility/V3Compatibility/test/ITKV3CompatibilityHeaderTest1.cxx:25: /<>/Modules/Compatibility/V3Compatibility/include/itkKernelFunction.h:51:20: warning: 'Evaluate' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual RealType Evaluate(const RealType & u) const = 0; ^ /<>/Modules/Core/Common/include/itkKernelFunctionBase.h:58:26: note: overridden virtual function is here virtual TRealValueType Evaluate(const TRealValueType & u) const ITK_OVERRIDE = 0; ^ In file included from /<>/BUILD/Modules/Compatibility/V3Compatibility/test/ITKV3CompatibilityHeaderTest1.cxx:25: /<>/Modules/Compatibility/V3Compatibility/include/itkKernelFunction.h:56:8: warning: 'PrintSelf' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void PrintSelf(std::ostream & os, Indent indent) const ^ /<>/Modules/Core/Common/include/itkKernelFunctionBase.h:70:8: note: overridden virtual function is here void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Linking CXX executable ../../../bin/ITKV3CompatibilityHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/FFT/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFFTTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKFFTTestDriver.dir/ITKFFTTestDriver.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkFFTShiftImageFilterTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkHalfToFullHermitianImageFilterTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkFullToHalfHermitianImageFilterTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkVnlRealFFTTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkForwardInverseFFTImageFilterTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkComplexToComplexFFTImageFilterTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkVnlComplexToComplexFFTImageFilterTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkFFTPadImageFilterTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkFFTWF_FFTTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkFFTWF_RealFFTTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTWF_FFTTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTWF_RealFFTTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkFFTWD_FFTTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkFFTWD_RealFFTTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTWD_FFTTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkVnlFFTWD_RealFFTTest.cxx.o CMakeFiles/ITKFFTTestDriver.dir/itkFFTWComplexToComplexFFTImageFilterTest.cxx.o -o ../../../../bin/ITKFFTTestDriver ../../../../lib/libITKFFT-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 56%] Built target ITKFFTTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/src/CMakeFiles/ITKDeprecated.dir/build.make Modules/Compatibility/Deprecated/src/CMakeFiles/ITKDeprecated.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKV3CompatibilityHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKV3CompatibilityHeaderTest1.dir/test/ITKV3CompatibilityHeaderTest1.cxx.o -o ../../../bin/ITKV3CompatibilityHeaderTest1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 56%] Built target ITKV3CompatibilityHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/Deprecated/src /<>/BUILD /<>/BUILD/Modules/Compatibility/Deprecated/src /<>/BUILD/Modules/Compatibility/Deprecated/src/CMakeFiles/ITKDeprecated.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeprecated make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/src/CMakeFiles/ITKDeprecated.dir/build.make Modules/Compatibility/Deprecated/src/CMakeFiles/ITKDeprecated.dir/build make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkInverseDeformationFieldImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/Deprecated/src/CMakeFiles/ITKDeprecated.dir/itkAnalyzeImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/ITKDisplacementFieldTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/DisplacementField/test/ITKDisplacementFieldTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/DisplacementField/test/ITKDisplacementFieldTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkComposeDisplacementFieldsImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/src && /usr/bin/c++ -DITKDeprecated_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/IO/GDCM/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKDeprecated.dir/itkAnalyzeImageIO.cxx.o -c /<>/Modules/Compatibility/Deprecated/src/itkAnalyzeImageIO.cxx In file included from /<>/Modules/Compatibility/Deprecated/src/itkAnalyzeImageIO.cxx:20: In file included from /<>/Modules/Compatibility/Deprecated/include/itkAnalyzeImageIO.h:36: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/Deprecated/src/CMakeFiles/ITKDeprecated.dir/itkAnalyzeImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/src && /usr/bin/c++ -DITKDeprecated_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/IO/GDCM/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKDeprecated.dir/itkAnalyzeImageIOFactory.cxx.o -c /<>/Modules/Compatibility/Deprecated/src/itkAnalyzeImageIOFactory.cxx In file included from /<>/Modules/Compatibility/Deprecated/src/itkAnalyzeImageIOFactory.cxx:18: In file included from /<>/Modules/Compatibility/Deprecated/include/itkAnalyzeImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/Deprecated/src/CMakeFiles/ITKDeprecated.dir/itkDICOMImageIO2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkComposeDisplacementFieldsImageFilterTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkComposeDisplacementFieldsImageFilterTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkComposeDisplacementFieldsImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkComposeDisplacementFieldsImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkDisplacementFieldJacobianDeterminantFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/ITKV3CompatibilityTestDriver.cxx.o -c /<>/BUILD/Modules/Compatibility/V3Compatibility/test/ITKV3CompatibilityTestDriver.cxx In file included from /<>/BUILD/Modules/Compatibility/V3Compatibility/test/ITKV3CompatibilityTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkIterativeInverseDeformationFieldImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/src && /usr/bin/c++ -DITKDeprecated_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/IO/GDCM/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKDeprecated.dir/itkDICOMImageIO2.cxx.o -c /<>/Modules/Compatibility/Deprecated/src/itkDICOMImageIO2.cxx In file included from /<>/Modules/Compatibility/Deprecated/src/itkDICOMImageIO2.cxx:20: In file included from /<>/Modules/Compatibility/Deprecated/include/itkDICOMImageIO2.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/Deprecated/src/CMakeFiles/ITKDeprecated.dir/itkDICOMImageIO2Factory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Deconvolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkTikhonovDeconvolutionImageFilterTest.cxx.o -c /<>/Modules/Filtering/Deconvolution/test/itkTikhonovDeconvolutionImageFilterTest.cxx In file included from /<>/Modules/Filtering/Deconvolution/test/itkTikhonovDeconvolutionImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkConstantBoundaryCondition.h:22: In file included from /<>/Modules/Core/Common/include/itkImageBoundaryCondition.h:23: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/Deprecated/src/CMakeFiles/ITKDeprecated.dir/itkDicomImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/src && /usr/bin/c++ -DITKDeprecated_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/IO/GDCM/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKDeprecated.dir/itkDICOMImageIO2Factory.cxx.o -c /<>/Modules/Compatibility/Deprecated/src/itkDICOMImageIO2Factory.cxx In file included from /<>/Modules/Compatibility/Deprecated/src/itkDICOMImageIO2Factory.cxx:18: In file included from /<>/Modules/Compatibility/Deprecated/include/itkDICOMImageIO2Factory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/Deprecated/src/CMakeFiles/ITKDeprecated.dir/itkDICOMSeriesFileNames.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkInverseDeformationFieldImageFilterTest.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkInverseDeformationFieldImageFilterTest.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkInverseDeformationFieldImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkInverseDeformationFieldImageFilterTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkInverseDeformationFieldImageFilter.h:161:16: warning: 'GenerateOutputInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateOutputInformation(); ^ /<>/Modules/Compatibility/V3Compatibility/test/itkInverseDeformationFieldImageFilterTest.cxx:50:3: note: in instantiation of template class 'itk::InverseDeformationFieldImageFilter, 2>, itk::Image, 2> >' requested here FilterType::Pointer filter = FilterType::New(); ^ /<>/Modules/Core/Common/include/itkProcessObject.h:741:16: note: overridden virtual function is here virtual void GenerateOutputInformation(); ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkInverseDeformationFieldImageFilterTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkInverseDeformationFieldImageFilter.h:168:16: warning: 'GenerateInputRequestedRegion' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateInputRequestedRegion(); ^ /<>/Modules/Core/Common/include/itkImageToImageFilter.h:261:16: note: overridden virtual function is here virtual void GenerateInputRequestedRegion() ITK_OVERRIDE; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkInverseDeformationFieldImageFilterTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkInverseDeformationFieldImageFilter.h:171:20: warning: 'GetMTime' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] ModifiedTimeType GetMTime() const; ^ /<>/Modules/Core/Common/include/itkObject.h:94:28: note: overridden virtual function is here virtual ModifiedTimeType GetMTime() const; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkInverseDeformationFieldImageFilterTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkInverseDeformationFieldImageFilter.h:189:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void GenerateData(); ^ /<>/Modules/Core/Common/include/itkImageSource.h:238:16: note: overridden virtual function is here virtual void GenerateData() ITK_OVERRIDE; ^ 5 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkTransformToDeformationFieldSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/src && /usr/bin/c++ -DITKDeprecated_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/IO/GDCM/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKDeprecated.dir/itkDicomImageIOFactory.cxx.o -c /<>/Modules/Compatibility/Deprecated/src/itkDicomImageIOFactory.cxx In file included from /<>/Modules/Compatibility/Deprecated/src/itkDicomImageIOFactory.cxx:18: In file included from /<>/Modules/Compatibility/Deprecated/include/itkDicomImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/Deprecated/src/CMakeFiles/ITKDeprecated.dir/itkSemaphore.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/src && /usr/bin/c++ -DITKDeprecated_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/IO/GDCM/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKDeprecated.dir/itkDICOMSeriesFileNames.cxx.o -c /<>/Modules/Compatibility/Deprecated/src/itkDICOMSeriesFileNames.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkTransformToDeformationFieldSourceTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/src && /usr/bin/c++ -DITKDeprecated_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/IO/GDCM/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKDeprecated.dir/itkSemaphore.cxx.o -c /<>/Modules/Compatibility/Deprecated/src/itkSemaphore.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Linking CXX shared library ../../../../lib/libITKDeprecated-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkIterativeInverseDeformationFieldImageFilterTest.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkIterativeInverseDeformationFieldImageFilterTest.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkIterativeInverseDeformationFieldImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkIterativeInverseDeformationFieldImageFilterTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkIterativeInverseDeformationFieldImageFilter.h:123:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void GenerateData(); ^ /<>/Modules/Compatibility/V3Compatibility/test/itkIterativeInverseDeformationFieldImageFilterTest.cxx:50:3: note: in instantiation of template class 'itk::IterativeInverseDeformationFieldImageFilter, 2>, itk::Image, 2> >' requested here FilterType::Pointer filter = FilterType::New(); ^ /<>/Modules/Core/Common/include/itkImageSource.h:238:16: note: overridden virtual function is here virtual void GenerateData() ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkDeformationFieldJacobianDeterminantFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDeprecated.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKDeprecated-4.12.so.1 -o ../../../../lib/libITKDeprecated-4.12.so.1 CMakeFiles/ITKDeprecated.dir/itkAnalyzeImageIO.cxx.o CMakeFiles/ITKDeprecated.dir/itkAnalyzeImageIOFactory.cxx.o CMakeFiles/ITKDeprecated.dir/itkDICOMImageIO2.cxx.o CMakeFiles/ITKDeprecated.dir/itkDICOMImageIO2Factory.cxx.o CMakeFiles/ITKDeprecated.dir/itkDicomImageIOFactory.cxx.o CMakeFiles/ITKDeprecated.dir/itkDICOMSeriesFileNames.cxx.o CMakeFiles/ITKDeprecated.dir/itkSemaphore.cxx.o ../../../../lib/libITKDICOMParser-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 -lznz -lniftiio -lz ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKDeprecated-4.12.so.1 ../../../../lib/libITKDeprecated-4.12.so.1 ../../../../lib/libITKDeprecated-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 56%] Built target ITKDeprecated make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/BioRad/test/CMakeFiles/ITKIOBioRadTestDriver.dir/build.make Modules/IO/BioRad/test/CMakeFiles/ITKIOBioRadTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BioRad/test /<>/BUILD /<>/BUILD/Modules/IO/BioRad/test /<>/BUILD/Modules/IO/BioRad/test/CMakeFiles/ITKIOBioRadTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBioRadTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/BioRad/test/CMakeFiles/ITKIOBioRadTestDriver.dir/build.make Modules/IO/BioRad/test/CMakeFiles/ITKIOBioRadTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/IO/BioRad/test/CMakeFiles/ITKIOBioRadTestDriver.dir/ITKIOBioRadTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Deconvolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkParametricBlindLeastSquaresDeconvolutionImageFilterTest.cxx.o -c /<>/Modules/Filtering/Deconvolution/test/itkParametricBlindLeastSquaresDeconvolutionImageFilterTest.cxx In file included from /<>/Modules/Filtering/Deconvolution/test/itkParametricBlindLeastSquaresDeconvolutionImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/Convolution/include/itkFFTConvolutionImageFilter.h:21: In file included from /<>/Modules/Filtering/Convolution/include/itkConvolutionImageFilterBase.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/IO/BioRad/test/CMakeFiles/ITKIOBioRadTestDriver.dir/itkBioRadImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkDisplacementFieldJacobianDeterminantFilterTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkDisplacementFieldJacobianDeterminantFilterTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkDisplacementFieldJacobianDeterminantFilterTest.cxx:20: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldJacobianDeterminantFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkIterativeInverseDisplacementFieldImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/Deconvolution/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkWienerDeconvolutionImageFilterTest.cxx.o -c /<>/Modules/Filtering/Deconvolution/test/itkWienerDeconvolutionImageFilterTest.cxx In file included from /<>/Modules/Filtering/Deconvolution/test/itkWienerDeconvolutionImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkConstantBoundaryCondition.h:22: In file included from /<>/Modules/Core/Common/include/itkImageBoundaryCondition.h:23: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Linking CXX executable ../../../../bin/ITKDeconvolutionTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Deconvolution/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDeconvolutionTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDeconvolutionTestDriver.dir/ITKDeconvolutionTestDriver.cxx.o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkInverseDeconvolutionImageFilterTest.cxx.o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkLandweberDeconvolutionImageFilterTest.cxx.o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkProjectedIterativeDeconvolutionImageFilterTest.cxx.o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkProjectedLandweberDeconvolutionImageFilterTest.cxx.o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkRichardsonLucyDeconvolutionImageFilterTest.cxx.o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkTikhonovDeconvolutionImageFilterTest.cxx.o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkWienerDeconvolutionImageFilterTest.cxx.o CMakeFiles/ITKDeconvolutionTestDriver.dir/itkParametricBlindLeastSquaresDeconvolutionImageFilterTest.cxx.o -o ../../../../bin/ITKDeconvolutionTestDriver ../../../../lib/libITKFFT-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 56%] Built target ITKDeconvolutionTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/LSM/test/CMakeFiles/ITKIOLSMTestDriver.dir/build.make Modules/IO/LSM/test/CMakeFiles/ITKIOLSMTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/LSM/test /<>/BUILD /<>/BUILD/Modules/IO/LSM/test /<>/BUILD/Modules/IO/LSM/test/CMakeFiles/ITKIOLSMTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOLSMTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/LSM/test/CMakeFiles/ITKIOLSMTestDriver.dir/build.make Modules/IO/LSM/test/CMakeFiles/ITKIOLSMTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/IO/LSM/test/CMakeFiles/ITKIOLSMTestDriver.dir/ITKIOLSMTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkTransformToDeformationFieldSourceTest.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkTransformToDeformationFieldSource.h:162:16: warning: 'GenerateOutputInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateOutputInformation(); ^ /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest.cxx:70:11: note: in instantiation of template class 'itk::TransformToDeformationFieldSource, 2>, double>' requested here typedef DeformationFieldGeneratorType::SizeType SizeType; ^ /<>/Modules/Core/Common/include/itkProcessObject.h:741:16: note: overridden virtual function is here virtual void GenerateOutputInformation(); ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkTransformToDeformationFieldSource.h:165:16: warning: 'BeforeThreadedGenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void BeforeThreadedGenerateData(); ^ /<>/Modules/Core/Common/include/itkImageSource.h:282:16: note: overridden virtual function is here virtual void BeforeThreadedGenerateData() {} ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkTransformToDeformationFieldSource.h:168:20: warning: 'GetMTime' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] ModifiedTimeType GetMTime() const; ^ /<>/Modules/Core/Common/include/itkObject.h:94:28: note: overridden virtual function is here virtual ModifiedTimeType GetMTime() const; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest.cxx:21: /<>/Modules/Compatibility/V3Compatibility/include/itkTransformToDeformationFieldSource.h:188:8: warning: 'ThreadedGenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void ThreadedGenerateData( ^ /<>/Modules/Core/Common/include/itkImageSource.h:262:16: note: overridden virtual function is here virtual void ThreadedGenerateData(const OutputImageRegionType & outputRegionForThread, ^ 5 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkOtsuThresholdImageCalculatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkTransformToDeformationFieldSourceTest1.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest1.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest1.cxx:26: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest1.cxx:30: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest1.cxx:60:11: note: in instantiation of template class 'itk::Euler3DTransform' requested here typedef TransformType::ParametersType ParametersType; ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest1.cxx:28: /<>/Modules/Compatibility/V3Compatibility/include/itkTransformToDeformationFieldSource.h:162:16: warning: 'GenerateOutputInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateOutputInformation(); ^ /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest1.cxx:210:3: note: in instantiation of template class 'itk::TransformToDeformationFieldSource, 3>, double>' requested here DeformationFieldGeneratorType::Pointer defGenerator ^ /<>/Modules/Core/Common/include/itkProcessObject.h:741:16: note: overridden virtual function is here virtual void GenerateOutputInformation(); ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest1.cxx:28: /<>/Modules/Compatibility/V3Compatibility/include/itkTransformToDeformationFieldSource.h:165:16: warning: 'BeforeThreadedGenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void BeforeThreadedGenerateData(); ^ /<>/Modules/Core/Common/include/itkImageSource.h:282:16: note: overridden virtual function is here virtual void BeforeThreadedGenerateData() {} ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest1.cxx:28: /<>/Modules/Compatibility/V3Compatibility/include/itkTransformToDeformationFieldSource.h:168:20: warning: 'GetMTime' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] ModifiedTimeType GetMTime() const; ^ /<>/Modules/Core/Common/include/itkObject.h:94:28: note: overridden virtual function is here virtual ModifiedTimeType GetMTime() const; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkTransformToDeformationFieldSourceTest1.cxx:28: /<>/Modules/Compatibility/V3Compatibility/include/itkTransformToDeformationFieldSource.h:188:8: warning: 'ThreadedGenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void ThreadedGenerateData( ^ /<>/Modules/Core/Common/include/itkImageSource.h:262:16: note: overridden virtual function is here virtual void ThreadedGenerateData(const OutputImageRegionType & outputRegionForThread, ^ 6 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkAddConstantToImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkOtsuThresholdImageCalculatorTest.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkOtsuThresholdImageCalculatorTest.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkOtsuThresholdImageCalculatorTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkDivideByConstantImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BioRad/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BioRad/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOBioRadTestDriver.dir/itkBioRadImageIOTest.cxx.o -c /<>/Modules/IO/BioRad/test/itkBioRadImageIOTest.cxx In file included from /<>/Modules/IO/BioRad/test/itkBioRadImageIOTest.cxx:18: In file included from /<>/Modules/IO/BioRad/include/itkBioRadImageIO.h:32: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkMultiplyByConstantImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkIterativeInverseDisplacementFieldImageFilterTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkIterativeInverseDisplacementFieldImageFilterTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkIterativeInverseDisplacementFieldImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkIterativeInverseDisplacementFieldImageFilter.h:22: In file included from /<>/Modules/Filtering/ImageGrid/include/itkWarpVectorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkLandmarkDisplacementFieldSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkDeformationFieldJacobianDeterminantFilterTest.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkDeformationFieldJacobianDeterminantFilterTest.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkDeformationFieldJacobianDeterminantFilterTest.cxx:20: In file included from /<>/Modules/Compatibility/V3Compatibility/include/itkDeformationFieldJacobianDeterminantFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkDeformationFieldJacobianDeterminantFilterTest.cxx:20: /<>/Modules/Compatibility/V3Compatibility/include/itkDeformationFieldJacobianDeterminantFilter.h:137:21: warning: 'EvaluateAtNeighborhood' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual TRealType EvaluateAtNeighborhood(const ConstNeighborhoodIteratorType & it) const; ^ /<>/Modules/Compatibility/V3Compatibility/test/itkDeformationFieldJacobianDeterminantFilterTest.cxx:78:8: note: in instantiation of template class 'itk::DeformationFieldJacobianDeterminantFilter, 2>, float, itk::Image >' requested here itk::DeformationFieldJacobianDeterminantFilter::Pointer ^ /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldJacobianDeterminantFilter.h:237:21: note: overridden virtual function is here virtual TRealType EvaluateAtNeighborhood(const ConstNeighborhoodIteratorType & it) const; ^ In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkDeformationFieldJacobianDeterminantFilterTest.cxx:20: /<>/Modules/Compatibility/V3Compatibility/include/itkDeformationFieldJacobianDeterminantFilter.h:137:21: warning: 'EvaluateAtNeighborhood' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual TRealType EvaluateAtNeighborhood(const ConstNeighborhoodIteratorType & it) const; ^ /<>/Modules/Compatibility/V3Compatibility/test/itkDeformationFieldJacobianDeterminantFilterTest.cxx:113:10: note: in instantiation of template class 'itk::DeformationFieldJacobianDeterminantFilter, 3>, float, itk::Image >' requested here itk::DeformationFieldJacobianDeterminantFilter::Pointer ^ /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldJacobianDeterminantFilter.h:237:21: note: overridden virtual function is here virtual TRealType EvaluateAtNeighborhood(const ConstNeighborhoodIteratorType & it) const; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkSubtractConstantFromImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkAddConstantToImageFilterTest.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkAddConstantToImageFilterTest.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkAddConstantToImageFilterTest.cxx:18: In file included from /<>/Modules/Compatibility/V3Compatibility/include/itkAddConstantToImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAddImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Compatibility/V3Compatibility/test/CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkGradientToMagnitudeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkDivideByConstantImageFilterTest.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkDivideByConstantImageFilterTest.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkDivideByConstantImageFilterTest.cxx:18: In file included from /<>/Modules/Compatibility/V3Compatibility/include/itkDivideByConstantImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkDivideImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkInverseDisplacementFieldImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkSubtractConstantFromImageFilterTest.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkSubtractConstantFromImageFilterTest.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkSubtractConstantFromImageFilterTest.cxx:18: In file included from /<>/Modules/Compatibility/V3Compatibility/include/itkSubtractConstantFromImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkSubtractImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkInvertDisplacementFieldImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkMultiplyByConstantImageFilterTest.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkMultiplyByConstantImageFilterTest.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkMultiplyByConstantImageFilterTest.cxx:18: In file included from /<>/Modules/Compatibility/V3Compatibility/include/itkMultiplyByConstantImageFilter.h:20: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkMultiplyImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 56%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkDisplacementFieldToBSplineImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Denoising/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Denoising/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDenoisingTestDriver.dir/itkPatchBasedDenoisingImageFilterTest.cxx.o -c /<>/Modules/Filtering/Denoising/test/itkPatchBasedDenoisingImageFilterTest.cxx In file included from /<>/Modules/Filtering/Denoising/test/itkPatchBasedDenoisingImageFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/Denoising/test/CMakeFiles/ITKDenoisingTestDriver.dir/itkPatchBasedDenoisingImageFilterDefaultTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkGradientToMagnitudeImageFilterTest.cxx.o -c /<>/Modules/Compatibility/V3Compatibility/test/itkGradientToMagnitudeImageFilterTest.cxx In file included from /<>/Modules/Compatibility/V3Compatibility/test/itkGradientToMagnitudeImageFilterTest.cxx:19: In file included from /<>/Modules/Compatibility/V3Compatibility/include/itkGradientToMagnitudeImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkVectorMagnitudeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../../bin/ITKV3CompatibilityTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkLandmarkDisplacementFieldSourceTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkLandmarkDisplacementFieldSourceTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkLandmarkDisplacementFieldSourceTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkLandmarkDisplacementFieldSource.h:21: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkDisplacementFieldTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/V3Compatibility/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKV3CompatibilityTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKV3CompatibilityTestDriver.dir/ITKV3CompatibilityTestDriver.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkDeformationFieldSourceTest.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkExponentialDeformationFieldImageFilterTest.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkInverseDeformationFieldImageFilterTest.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkIterativeInverseDeformationFieldImageFilterTest.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkTransformToDeformationFieldSourceTest.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkTransformToDeformationFieldSourceTest1.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkDeformationFieldJacobianDeterminantFilterTest.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkOtsuThresholdImageCalculatorTest.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkAddConstantToImageFilterTest.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkDivideByConstantImageFilterTest.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkMultiplyByConstantImageFilterTest.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkSubtractConstantFromImageFilterTest.cxx.o CMakeFiles/ITKV3CompatibilityTestDriver.dir/itkGradientToMagnitudeImageFilterTest.cxx.o -o ../../../../bin/ITKV3CompatibilityTestDriver -ldouble-conversion ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKV3CompatibilityTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/LSM/CMakeFiles/ITKIOLSMHeaderTest1.dir/build.make Modules/IO/LSM/CMakeFiles/ITKIOLSMHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 57%] Generating test/ITKIOLSMHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/LSM && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOLSM /<>/Modules/IO/LSM /<>/BUILD/Modules/IO/LSM 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/LSM /<>/BUILD /<>/BUILD/Modules/IO/LSM /<>/BUILD/Modules/IO/LSM/CMakeFiles/ITKIOLSMHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOLSMHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/LSM/CMakeFiles/ITKIOLSMHeaderTest1.dir/build.make Modules/IO/LSM/CMakeFiles/ITKIOLSMHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/LSM/CMakeFiles/ITKIOLSMHeaderTest1.dir/test/ITKIOLSMHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkInvertDisplacementFieldImageFilterTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkInvertDisplacementFieldImageFilterTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkInvertDisplacementFieldImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkInvertDisplacementFieldImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkGaussianSmoothingOnUpdateDisplacementFieldTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/LSM && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/TIFF/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/usr/include/x86_64-linux-gnu -I/<>/Modules/IO/LSM/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOLSMHeaderTest1.dir/test/ITKIOLSMHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/LSM/test/ITKIOLSMHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/LSM/test/ITKIOLSMHeaderTest1.cxx:23: In file included from /<>/Modules/IO/LSM/include/itkLSMImageIOFactory.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../bin/ITKIOLSMHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/LSM && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOLSMHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOLSMHeaderTest1.dir/test/ITKIOLSMHeaderTest1.cxx.o -o ../../../bin/ITKIOLSMHeaderTest1 ../../../lib/libITKIOLSM-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKIOLSMHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Stimulate/test/CMakeFiles/ITKIOStimulateTestDriver.dir/build.make Modules/IO/Stimulate/test/CMakeFiles/ITKIOStimulateTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Stimulate/test /<>/BUILD /<>/BUILD/Modules/IO/Stimulate/test /<>/BUILD/Modules/IO/Stimulate/test/CMakeFiles/ITKIOStimulateTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOStimulateTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Stimulate/test/CMakeFiles/ITKIOStimulateTestDriver.dir/build.make Modules/IO/Stimulate/test/CMakeFiles/ITKIOStimulateTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/Stimulate/test/CMakeFiles/ITKIOStimulateTestDriver.dir/ITKIOStimulateTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkInverseDisplacementFieldImageFilterTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkInverseDisplacementFieldImageFilterTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkInverseDisplacementFieldImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkInverseDisplacementFieldImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkBSplineSmoothingOnUpdateDisplacementFieldTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkDisplacementFieldToBSplineImageFilterTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkDisplacementFieldToBSplineImageFilterTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkDisplacementFieldToBSplineImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldToBSplineImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkGaussianExponentialDiffeomorphicTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkDisplacementFieldTransformTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkDisplacementFieldTransformTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkDisplacementFieldTransformTest.cxx:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkBSplineExponentialDiffeomorphicTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkGaussianSmoothingOnUpdateDisplacementFieldTransformTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkGaussianSmoothingOnUpdateDisplacementFieldTransformTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkGaussianSmoothingOnUpdateDisplacementFieldTransformTest.cxx:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkGaussianSmoothingOnUpdateDisplacementFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTimeVaryingVelocityFieldTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkBSplineSmoothingOnUpdateDisplacementFieldTransformTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkBSplineSmoothingOnUpdateDisplacementFieldTransformTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkBSplineSmoothingOnUpdateDisplacementFieldTransformTest.cxx:20: In file included from /<>/Modules/Filtering/DisplacementField/include/itkBSplineSmoothingOnUpdateDisplacementFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTimeVaryingVelocityFieldIntegrationImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkGaussianExponentialDiffeomorphicTransformTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkGaussianExponentialDiffeomorphicTransformTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkGaussianExponentialDiffeomorphicTransformTest.cxx:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkGaussianExponentialDiffeomorphicTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkConstantVelocityFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTimeVaryingBSplineVelocityFieldTransformTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTimeVaryingVelocityFieldTransformTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkTimeVaryingVelocityFieldTransformTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkTimeVaryingVelocityFieldTransformTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkTimeVaryingVelocityFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkVelocityFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTransformToDisplacementFieldFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkBSplineExponentialDiffeomorphicTransformTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkBSplineExponentialDiffeomorphicTransformTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkBSplineExponentialDiffeomorphicTransformTest.cxx:20: In file included from /<>/Modules/Filtering/DisplacementField/include/itkBSplineExponentialDiffeomorphicTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkConstantVelocityFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTransformToDisplacementFieldFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTimeVaryingVelocityFieldIntegrationImageFilterTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkTimeVaryingVelocityFieldIntegrationImageFilterTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkTimeVaryingVelocityFieldIntegrationImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkTimeVaryingVelocityFieldIntegrationImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkDisplacementFieldTransformCloneTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BioRad/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BioRad/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOBioRadTestDriver.dir/ITKIOBioRadTestDriver.cxx.o -c /<>/BUILD/Modules/IO/BioRad/test/ITKIOBioRadTestDriver.cxx In file included from /<>/BUILD/Modules/IO/BioRad/test/ITKIOBioRadTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../../bin/ITKIOBioRadTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/BioRad/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOBioRadTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOBioRadTestDriver.dir/ITKIOBioRadTestDriver.cxx.o CMakeFiles/ITKIOBioRadTestDriver.dir/itkBioRadImageIOTest.cxx.o -o ../../../../bin/ITKIOBioRadTestDriver ../../../../lib/libITKIOBioRad-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKIOBioRadTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Common/CMakeFiles/ITKRegistrationCommonHeaderTest2.dir/build.make Modules/Registration/Common/CMakeFiles/ITKRegistrationCommonHeaderTest2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 57%] Generating test/ITKRegistrationCommonHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKRegistrationCommon /<>/Modules/Registration/Common /<>/BUILD/Modules/Registration/Common 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Common /<>/BUILD /<>/BUILD/Modules/Registration/Common /<>/BUILD/Modules/Registration/Common/CMakeFiles/ITKRegistrationCommonHeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationCommonHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Common/CMakeFiles/ITKRegistrationCommonHeaderTest2.dir/build.make Modules/Registration/Common/CMakeFiles/ITKRegistrationCommonHeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/CMakeFiles/ITKRegistrationCommonHeaderTest2.dir/test/ITKRegistrationCommonHeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonHeaderTest2.dir/test/ITKRegistrationCommonHeaderTest2.cxx.o -c /<>/BUILD/Modules/Registration/Common/test/ITKRegistrationCommonHeaderTest2.cxx In file included from /<>/BUILD/Modules/Registration/Common/test/ITKRegistrationCommonHeaderTest2.cxx:23: In file included from /<>/Modules/Registration/Common/include/itkSimpleMultiResolutionImageRegistrationUI.h:21: In file included from /<>/Modules/Registration/Common/include/itkMultiResolutionImageRegistrationMethod.h:22: In file included from /<>/Modules/Registration/Common/include/itkImageToImageMetric.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../bin/ITKRegistrationCommonHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKRegistrationCommonHeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKRegistrationCommonHeaderTest2.dir/test/ITKRegistrationCommonHeaderTest2.cxx.o -o ../../../bin/ITKRegistrationCommonHeaderTest2 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKRegistrationCommonHeaderTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/build.make Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Common/test /<>/BUILD /<>/BUILD/Modules/Registration/Common/test /<>/BUILD/Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationCommonTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/build.make Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/ITKRegistrationCommonTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTransformToDisplacementFieldFilterTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkTransformToDisplacementFieldFilterTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkTransformToDisplacementFieldFilterTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DisplacementField/test/CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkExponentialDisplacementFieldImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkDisplacementFieldTransformCloneTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkDisplacementFieldTransformCloneTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkDisplacementFieldTransformCloneTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkBSplineTransformParametersAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/LSM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/LSM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOLSMTestDriver.dir/ITKIOLSMTestDriver.cxx.o -c /<>/BUILD/Modules/IO/LSM/test/ITKIOLSMTestDriver.cxx In file included from /<>/BUILD/Modules/IO/LSM/test/ITKIOLSMTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/LSM/test/CMakeFiles/ITKIOLSMTestDriver.dir/itkLSMImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Denoising/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Denoising/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDenoisingTestDriver.dir/itkPatchBasedDenoisingImageFilterDefaultTest.cxx.o -c /<>/Modules/Filtering/Denoising/test/itkPatchBasedDenoisingImageFilterDefaultTest.cxx In file included from /<>/Modules/Filtering/Denoising/test/itkPatchBasedDenoisingImageFilterDefaultTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../../bin/ITKDenoisingTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTimeVaryingBSplineVelocityFieldTransformTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkTimeVaryingBSplineVelocityFieldTransformTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkTimeVaryingBSplineVelocityFieldTransformTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkTimeVaryingBSplineVelocityFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkVelocityFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkDisplacementFieldTransformParametersAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/Denoising/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDenoisingTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDenoisingTestDriver.dir/ITKDenoisingTestDriver.cxx.o CMakeFiles/ITKDenoisingTestDriver.dir/itkPatchBasedDenoisingImageFilterTest.cxx.o CMakeFiles/ITKDenoisingTestDriver.dir/itkPatchBasedDenoisingImageFilterDefaultTest.cxx.o -o ../../../../bin/ITKDenoisingTestDriver ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKDenoisingTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Common/CMakeFiles/ITKRegistrationCommonHeaderTest1.dir/build.make Modules/Registration/Common/CMakeFiles/ITKRegistrationCommonHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 57%] Generating test/ITKRegistrationCommonHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKRegistrationCommon /<>/Modules/Registration/Common /<>/BUILD/Modules/Registration/Common 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Common /<>/BUILD /<>/BUILD/Modules/Registration/Common /<>/BUILD/Modules/Registration/Common/CMakeFiles/ITKRegistrationCommonHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationCommonHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Common/CMakeFiles/ITKRegistrationCommonHeaderTest1.dir/build.make Modules/Registration/Common/CMakeFiles/ITKRegistrationCommonHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/CMakeFiles/ITKRegistrationCommonHeaderTest1.dir/test/ITKRegistrationCommonHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTransformToDisplacementFieldFilterTest1.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkTransformToDisplacementFieldFilterTest1.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkTransformToDisplacementFieldFilterTest1.cxx:26: In file included from /<>/Modules/Filtering/DisplacementField/include/itkTransformToDisplacementFieldFilter.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Filtering/DisplacementField/test/itkTransformToDisplacementFieldFilterTest1.cxx:28: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Filtering/DisplacementField/test/itkTransformToDisplacementFieldFilterTest1.cxx:59:11: note: in instantiation of template class 'itk::Euler3DTransform' requested here typedef TransformType::ParametersType ParametersType; ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkBSplineSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonHeaderTest1.dir/test/ITKRegistrationCommonHeaderTest1.cxx.o -c /<>/BUILD/Modules/Registration/Common/test/ITKRegistrationCommonHeaderTest1.cxx In file included from /<>/BUILD/Modules/Registration/Common/test/ITKRegistrationCommonHeaderTest1.cxx:23: In file included from /<>/Modules/Registration/Common/include/itkMeanSquaresHistogramImageToImageMetric.hxx:21: In file included from /<>/Modules/Registration/Common/include/itkMeanSquaresHistogramImageToImageMetric.h:21: In file included from /<>/Modules/Registration/Common/include/itkHistogramImageToImageMetric.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../bin/ITKRegistrationCommonHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKRegistrationCommonHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKRegistrationCommonHeaderTest1.dir/test/ITKRegistrationCommonHeaderTest1.cxx.o -o ../../../bin/ITKRegistrationCommonHeaderTest1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKRegistrationCommonHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DiffusionTensorImage/test/CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/build.make Modules/Filtering/DiffusionTensorImage/test/CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DiffusionTensorImage/test /<>/BUILD /<>/BUILD/Modules/Filtering/DiffusionTensorImage/test /<>/BUILD/Modules/Filtering/DiffusionTensorImage/test/CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDiffusionTensorImageTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DiffusionTensorImage/test/CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/build.make Modules/Filtering/DiffusionTensorImage/test/CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DiffusionTensorImage/test/CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/ITKDiffusionTensorImageTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkExponentialDisplacementFieldImageFilterTest.cxx.o -c /<>/Modules/Filtering/DisplacementField/test/itkExponentialDisplacementFieldImageFilterTest.cxx In file included from /<>/Modules/Filtering/DisplacementField/test/itkExponentialDisplacementFieldImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkExponentialDisplacementFieldImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkDivideImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../../bin/ITKDisplacementFieldTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/LSM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/LSM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOLSMTestDriver.dir/itkLSMImageIOTest.cxx.o -c /<>/Modules/IO/LSM/test/itkLSMImageIOTest.cxx In file included from /<>/Modules/IO/LSM/test/itkLSMImageIOTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../../bin/ITKIOLSMTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DisplacementField/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDisplacementFieldTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDisplacementFieldTestDriver.dir/ITKDisplacementFieldTestDriver.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkComposeDisplacementFieldsImageFilterTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkDisplacementFieldJacobianDeterminantFilterTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkIterativeInverseDisplacementFieldImageFilterTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkLandmarkDisplacementFieldSourceTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkInverseDisplacementFieldImageFilterTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkInvertDisplacementFieldImageFilterTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkDisplacementFieldToBSplineImageFilterTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkDisplacementFieldTransformTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkGaussianSmoothingOnUpdateDisplacementFieldTransformTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkBSplineSmoothingOnUpdateDisplacementFieldTransformTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkGaussianExponentialDiffeomorphicTransformTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkBSplineExponentialDiffeomorphicTransformTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTimeVaryingVelocityFieldTransformTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTimeVaryingVelocityFieldIntegrationImageFilterTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTimeVaryingBSplineVelocityFieldTransformTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTransformToDisplacementFieldFilterTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkTransformToDisplacementFieldFilterTest1.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkDisplacementFieldTransformCloneTest.cxx.o CMakeFiles/ITKDisplacementFieldTestDriver.dir/itkExponentialDisplacementFieldImageFilterTest.cxx.o -o ../../../../bin/ITKDisplacementFieldTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKDisplacementFieldTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DiffusionTensorImage/CMakeFiles/ITKDiffusionTensorImageHeaderTest1.dir/build.make Modules/Filtering/DiffusionTensorImage/CMakeFiles/ITKDiffusionTensorImageHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 57%] Generating test/ITKDiffusionTensorImageHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DiffusionTensorImage && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKDiffusionTensorImage /<>/Modules/Filtering/DiffusionTensorImage /<>/BUILD/Modules/Filtering/DiffusionTensorImage 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DiffusionTensorImage /<>/BUILD /<>/BUILD/Modules/Filtering/DiffusionTensorImage /<>/BUILD/Modules/Filtering/DiffusionTensorImage/CMakeFiles/ITKDiffusionTensorImageHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDiffusionTensorImageHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DiffusionTensorImage/CMakeFiles/ITKDiffusionTensorImageHeaderTest1.dir/build.make Modules/Filtering/DiffusionTensorImage/CMakeFiles/ITKDiffusionTensorImageHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DiffusionTensorImage/CMakeFiles/ITKDiffusionTensorImageHeaderTest1.dir/test/ITKDiffusionTensorImageHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/LSM/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOLSMTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOLSMTestDriver.dir/ITKIOLSMTestDriver.cxx.o CMakeFiles/ITKIOLSMTestDriver.dir/itkLSMImageIOTest.cxx.o -o ../../../../bin/ITKIOLSMTestDriver ../../../../lib/libITKIOLSM-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKIOLSMTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Eigen/test/CMakeFiles/ITKEigenTestDriver.dir/build.make Modules/Numerics/Eigen/test/CMakeFiles/ITKEigenTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Eigen/test /<>/BUILD /<>/BUILD/Modules/Numerics/Eigen/test /<>/BUILD/Modules/Numerics/Eigen/test/CMakeFiles/ITKEigenTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKEigenTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Eigen/test/CMakeFiles/ITKEigenTestDriver.dir/build.make Modules/Numerics/Eigen/test/CMakeFiles/ITKEigenTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/Eigen/test/CMakeFiles/ITKEigenTestDriver.dir/ITKEigenTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkDisplacementFieldTransformParametersAdaptorTest.cxx.o -c /<>/Modules/Registration/Common/test/itkDisplacementFieldTransformParametersAdaptorTest.cxx In file included from /<>/Modules/Registration/Common/test/itkDisplacementFieldTransformParametersAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkGaussianSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkBSplineTransformParametersAdaptorTest.cxx.o -c /<>/Modules/Registration/Common/test/itkBSplineTransformParametersAdaptorTest.cxx In file included from /<>/Modules/Registration/Common/test/itkBSplineTransformParametersAdaptorTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkBSplineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkBSplineExponentialDiffeomorphicTransformParametersAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DiffusionTensorImage && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDiffusionTensorImageHeaderTest1.dir/test/ITKDiffusionTensorImageHeaderTest1.cxx.o -c /<>/BUILD/Modules/Filtering/DiffusionTensorImage/test/ITKDiffusionTensorImageHeaderTest1.cxx In file included from /<>/BUILD/Modules/Filtering/DiffusionTensorImage/test/ITKDiffusionTensorImageHeaderTest1.cxx:23: In file included from /<>/Modules/Filtering/DiffusionTensorImage/include/itkDiffusionTensor3DReconstructionImageFilter.hxx:22: In file included from /<>/Modules/Filtering/DiffusionTensorImage/include/itkDiffusionTensor3DReconstructionImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../bin/ITKDiffusionTensorImageHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DiffusionTensorImage && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDiffusionTensorImageHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDiffusionTensorImageHeaderTest1.dir/test/ITKDiffusionTensorImageHeaderTest1.cxx.o -o ../../../bin/ITKDiffusionTensorImageHeaderTest1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKDiffusionTensorImageHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/build.make Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/XML/test /<>/BUILD /<>/BUILD/Modules/IO/XML/test /<>/BUILD/Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOXMLTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/build.make Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/ITKIOXMLTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkBSplineSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest.cxx.o -c /<>/Modules/Registration/Common/test/itkBSplineSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest.cxx In file included from /<>/Modules/Registration/Common/test/itkBSplineSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkBSplineSmoothingOnUpdateDisplacementFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkGaussianExponentialDiffeomorphicTransformParametersAdaptorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Stimulate/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/Stimulate/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOStimulateTestDriver.dir/ITKIOStimulateTestDriver.cxx.o -c /<>/BUILD/Modules/IO/Stimulate/test/ITKIOStimulateTestDriver.cxx In file included from /<>/BUILD/Modules/IO/Stimulate/test/ITKIOStimulateTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/Stimulate/test/CMakeFiles/ITKIOStimulateTestDriver.dir/itkStimulateImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkGaussianSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest.cxx.o -c /<>/Modules/Registration/Common/test/itkGaussianSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest.cxx In file included from /<>/Modules/Registration/Common/test/itkGaussianSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkGaussianSmoothingOnUpdateDisplacementFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkCenteredTransformInitializerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Stimulate/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/Stimulate/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOStimulateTestDriver.dir/itkStimulateImageIOTest.cxx.o -c /<>/Modules/IO/Stimulate/test/itkStimulateImageIOTest.cxx In file included from /<>/Modules/IO/Stimulate/test/itkStimulateImageIOTest.cxx:21: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/Stimulate/test/CMakeFiles/ITKIOStimulateTestDriver.dir/itkStimulateImageIOTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkBSplineExponentialDiffeomorphicTransformParametersAdaptorTest.cxx.o -c /<>/Modules/Registration/Common/test/itkBSplineExponentialDiffeomorphicTransformParametersAdaptorTest.cxx In file included from /<>/Modules/Registration/Common/test/itkBSplineExponentialDiffeomorphicTransformParametersAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkBSplineExponentialDiffeomorphicTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkConstantVelocityFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkCenteredVersorTransformInitializerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkCenteredTransformInitializerTest.cxx.o -c /<>/Modules/Registration/Common/test/itkCenteredTransformInitializerTest.cxx In file included from /<>/Modules/Registration/Common/test/itkCenteredTransformInitializerTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Registration/Common/test/itkCenteredTransformInitializerTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/Common/test/itkCenteredTransformInitializerTest.cxx:45:3: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here TransformType::InputPointType fixedCenter; ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Registration/Common/test/itkCenteredTransformInitializerTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/Common/test/itkCenteredTransformInitializerTest.cxx:45:3: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here TransformType::InputPointType fixedCenter; ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMultiResolutionImageRegistrationMethodTest_1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkGaussianExponentialDiffeomorphicTransformParametersAdaptorTest.cxx.o -c /<>/Modules/Registration/Common/test/itkGaussianExponentialDiffeomorphicTransformParametersAdaptorTest.cxx In file included from /<>/Modules/Registration/Common/test/itkGaussianExponentialDiffeomorphicTransformParametersAdaptorTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkGaussianExponentialDiffeomorphicTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkConstantVelocityFieldTransform.h:21: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMultiResolutionImageRegistrationMethodTest_2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Stimulate/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/Stimulate/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOStimulateTestDriver.dir/itkStimulateImageIOTest2.cxx.o -c /<>/Modules/IO/Stimulate/test/itkStimulateImageIOTest2.cxx In file included from /<>/Modules/IO/Stimulate/test/itkStimulateImageIOTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../../bin/ITKIOStimulateTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Stimulate/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOStimulateTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOStimulateTestDriver.dir/ITKIOStimulateTestDriver.cxx.o CMakeFiles/ITKIOStimulateTestDriver.dir/itkStimulateImageIOTest.cxx.o CMakeFiles/ITKIOStimulateTestDriver.dir/itkStimulateImageIOTest2.cxx.o -o ../../../../bin/ITKIOStimulateTestDriver ../../../../lib/libITKIOStimulate-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKIOStimulateTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/XML/CMakeFiles/ITKIOXMLHeaderTest1.dir/build.make Modules/IO/XML/CMakeFiles/ITKIOXMLHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 57%] Generating test/ITKIOXMLHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOXML /<>/Modules/IO/XML /<>/BUILD/Modules/IO/XML 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/XML /<>/BUILD /<>/BUILD/Modules/IO/XML /<>/BUILD/Modules/IO/XML/CMakeFiles/ITKIOXMLHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOXMLHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/XML/CMakeFiles/ITKIOXMLHeaderTest1.dir/build.make Modules/IO/XML/CMakeFiles/ITKIOXMLHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/XML/CMakeFiles/ITKIOXMLHeaderTest1.dir/test/ITKIOXMLHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOXMLHeaderTest1.dir/test/ITKIOXMLHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/XML/test/ITKIOXMLHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../bin/ITKIOXMLHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOXMLHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOXMLHeaderTest1.dir/test/ITKIOXMLHeaderTest1.cxx.o -o ../../../bin/ITKIOXMLHeaderTest1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKIOXMLHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/SpatialObjects/test/CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/build.make Modules/IO/SpatialObjects/test/CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/SpatialObjects/test /<>/BUILD /<>/BUILD/Modules/IO/SpatialObjects/test /<>/BUILD/Modules/IO/SpatialObjects/test/CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSpatialObjectsTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/SpatialObjects/test/CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/build.make Modules/IO/SpatialObjects/test/CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/SpatialObjects/test/CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/ITKIOSpatialObjectsTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkCenteredVersorTransformInitializerTest.cxx.o -c /<>/Modules/Registration/Common/test/itkCenteredVersorTransformInitializerTest.cxx In file included from /<>/Modules/Registration/Common/test/itkCenteredVersorTransformInitializerTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkCenteredVersorTransformInitializer.h:21: In file included from /<>/Modules/Registration/Common/include/itkCenteredTransformInitializer.h:23: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkImageMomentsCalculator.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Registration/Common/test/itkCenteredVersorTransformInitializerTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkCenteredVersorTransformInitializer.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/Common/test/itkCenteredVersorTransformInitializerTest.cxx:149:3: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here TransformType::Pointer transform = TransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Registration/Common/test/itkCenteredVersorTransformInitializerTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkCenteredVersorTransformInitializer.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/Common/test/itkCenteredVersorTransformInitializerTest.cxx:149:3: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here TransformType::Pointer transform = TransformType::New(); ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_10.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/ITKRegistrationCommonTestDriver.cxx.o -c /<>/BUILD/Modules/Registration/Common/test/ITKRegistrationCommonTestDriver.cxx In file included from /<>/BUILD/Modules/Registration/Common/test/ITKRegistrationCommonTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_11.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_10.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_10.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_10.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_12.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DiffusionTensorImage/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/ITKDiffusionTensorImageTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/DiffusionTensorImage/test/ITKDiffusionTensorImageTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/DiffusionTensorImage/test/ITKDiffusionTensorImageTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DiffusionTensorImage/test/CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/itkDiffusionTensor3DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMultiResolutionImageRegistrationMethodTest_1.cxx.o -c /<>/Modules/Registration/Common/test/itkMultiResolutionImageRegistrationMethodTest_1.cxx In file included from /<>/Modules/Registration/Common/test/itkMultiResolutionImageRegistrationMethodTest_1.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkMutualInformationImageToImageMetric.h:21: In file included from /<>/Modules/Registration/Common/include/itkImageToImageMetric.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_13.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Eigen/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Numerics/Eigen/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKEigenTestDriver.dir/ITKEigenTestDriver.cxx.o -c /<>/BUILD/Modules/Numerics/Eigen/test/ITKEigenTestDriver.cxx In file included from /<>/BUILD/Modules/Numerics/Eigen/test/ITKEigenTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/Eigen/test/CMakeFiles/ITKEigenTestDriver.dir/itkEigenAnalysis2DImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DiffusionTensorImage/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/itkDiffusionTensor3DTest.cxx.o -c /<>/Modules/Filtering/DiffusionTensorImage/test/itkDiffusionTensor3DTest.cxx In file included from /<>/Modules/Filtering/DiffusionTensorImage/test/itkDiffusionTensor3DTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DiffusionTensorImage/test/CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/itkDiffusionTensor3DReconstructionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMultiResolutionImageRegistrationMethodTest_2.cxx.o -c /<>/Modules/Registration/Common/test/itkMultiResolutionImageRegistrationMethodTest_2.cxx In file included from /<>/Modules/Registration/Common/test/itkMultiResolutionImageRegistrationMethodTest_2.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkQuaternionRigidTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Registration/Common/test/itkMultiResolutionImageRegistrationMethodTest_2.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkQuaternionRigidTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkQuaternionRigidTransform.h:49:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Registration/Common/test/itkMultiResolutionImageRegistrationMethodTest_2.cxx:115:3: note: in instantiation of template class 'itk::QuaternionRigidTransform' requested here TransformType::Pointer transform = TransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_14.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Eigen/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Numerics/Eigen/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKEigenTestDriver.dir/itkEigenAnalysis2DImageFilterTest.cxx.o -c /<>/Modules/Numerics/Eigen/test/itkEigenAnalysis2DImageFilterTest.cxx In file included from /<>/Modules/Numerics/Eigen/test/itkEigenAnalysis2DImageFilterTest.cxx:19: In file included from /<>/Modules/Numerics/Eigen/include/itkEigenAnalysis2DImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../../bin/ITKEigenTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/Eigen/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKEigenTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKEigenTestDriver.dir/ITKEigenTestDriver.cxx.o CMakeFiles/ITKEigenTestDriver.dir/itkEigenAnalysis2DImageFilterTest.cxx.o -o ../../../../bin/ITKEigenTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKEigenTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/SpatialObjects/CMakeFiles/ITKIOSpatialObjectsHeaderTest1.dir/build.make Modules/IO/SpatialObjects/CMakeFiles/ITKIOSpatialObjectsHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 57%] Generating test/ITKIOSpatialObjectsHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/SpatialObjects && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOSpatialObjects /<>/Modules/IO/SpatialObjects /<>/BUILD/Modules/IO/SpatialObjects 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/SpatialObjects /<>/BUILD /<>/BUILD/Modules/IO/SpatialObjects /<>/BUILD/Modules/IO/SpatialObjects/CMakeFiles/ITKIOSpatialObjectsHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSpatialObjectsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/SpatialObjects/CMakeFiles/ITKIOSpatialObjectsHeaderTest1.dir/build.make Modules/IO/SpatialObjects/CMakeFiles/ITKIOSpatialObjectsHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/SpatialObjects/CMakeFiles/ITKIOSpatialObjectsHeaderTest1.dir/test/ITKIOSpatialObjectsHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_11.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_11.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_11.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_15.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_12.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_12.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_12.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_16.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/SpatialObjects && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/IO/SpatialObjects/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOSpatialObjectsHeaderTest1.dir/test/ITKIOSpatialObjectsHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/SpatialObjects/test/ITKIOSpatialObjectsHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/SpatialObjects/test/ITKIOSpatialObjectsHeaderTest1.cxx:23: In file included from /<>/Modules/IO/SpatialObjects/include/itkSpatialObjectReader.hxx:21: In file included from /<>/Modules/IO/SpatialObjects/include/itkSpatialObjectReader.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaSceneConverter.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSceneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../bin/ITKIOSpatialObjectsHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOSpatialObjectsHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOSpatialObjectsHeaderTest1.dir/test/ITKIOSpatialObjectsHeaderTest1.cxx.o -o ../../../bin/ITKIOSpatialObjectsHeaderTest1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKIOSpatialObjectsHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/build.make Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/FEM/src /<>/BUILD /<>/BUILD/Modules/Numerics/FEM/src /<>/BUILD/Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFEM make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/build.make Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMSolution.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMSolution.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMSolution.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearLine.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearLine.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0LinearLine.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearLineStress.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearLineStress.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0LinearLineStress.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearQuadrilateral.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearQuadrilateral.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0LinearQuadrilateral.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearQuadrilateralMembrane.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DiffusionTensorImage/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/itkDiffusionTensor3DReconstructionImageFilterTest.cxx.o -c /<>/Modules/Filtering/DiffusionTensorImage/test/itkDiffusionTensor3DReconstructionImageFilterTest.cxx In file included from /<>/Modules/Filtering/DiffusionTensorImage/test/itkDiffusionTensor3DReconstructionImageFilterTest.cxx:18: In file included from /<>/Modules/Filtering/DiffusionTensorImage/include/itkDiffusionTensor3DReconstructionImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DiffusionTensorImage/test/CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/itkTensorRelativeAnisotropyImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearQuadrilateralMembrane.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0LinearQuadrilateralMembrane.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearQuadrilateralStrain.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearQuadrilateralStrain.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0LinearQuadrilateralStrain.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearQuadrilateralStress.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearQuadrilateralStress.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0LinearQuadrilateralStress.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearTriangular.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearTriangular.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0LinearTriangular.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearTriangularMembrane.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearTriangularMembrane.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0LinearTriangularMembrane.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearTriangularStrain.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearTriangularStrain.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0LinearTriangularStrain.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearTriangularStress.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DiffusionTensorImage/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/itkTensorRelativeAnisotropyImageFilterTest.cxx.o -c /<>/Modules/Filtering/DiffusionTensorImage/test/itkTensorRelativeAnisotropyImageFilterTest.cxx In file included from /<>/Modules/Filtering/DiffusionTensorImage/test/itkTensorRelativeAnisotropyImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHessianRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Filtering/DiffusionTensorImage/test/CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/itkTensorFractionalAnisotropyImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearTriangularStress.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0LinearTriangularStress.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0QuadraticTriangular.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0QuadraticTriangular.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0QuadraticTriangular.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0QuadraticTriangularStrain.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0QuadraticTriangularStrain.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0QuadraticTriangularStrain.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC0QuadraticTriangularStress.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0QuadraticTriangularStress.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC0QuadraticTriangularStress.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement2DC1Beam.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/ITKIOSpatialObjectsTestDriver.cxx.o -c /<>/BUILD/Modules/IO/SpatialObjects/test/ITKIOSpatialObjectsTestDriver.cxx In file included from /<>/BUILD/Modules/IO/SpatialObjects/test/ITKIOSpatialObjectsTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/SpatialObjects/test/CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/itkPolygonGroupSpatialObjectXMLFileTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement2DC1Beam.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement2DC1Beam.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearHexahedron.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DiffusionTensorImage/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/itkTensorFractionalAnisotropyImageFilterTest.cxx.o -c /<>/Modules/Filtering/DiffusionTensorImage/test/itkTensorFractionalAnisotropyImageFilterTest.cxx In file included from /<>/Modules/Filtering/DiffusionTensorImage/test/itkTensorFractionalAnisotropyImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHessianRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../../bin/ITKDiffusionTensorImageTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/DiffusionTensorImage/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/ITKDiffusionTensorImageTestDriver.cxx.o CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/itkDiffusionTensor3DTest.cxx.o CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/itkDiffusionTensor3DReconstructionImageFilterTest.cxx.o CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/itkTensorRelativeAnisotropyImageFilterTest.cxx.o CMakeFiles/ITKDiffusionTensorImageTestDriver.dir/itkTensorFractionalAnisotropyImageFilterTest.cxx.o -o ../../../../bin/ITKDiffusionTensorImageTestDriver ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKDiffusionTensorImageTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/PDEDeformable/CMakeFiles/ITKPDEDeformableRegistrationHeaderTest1.dir/build.make Modules/Registration/PDEDeformable/CMakeFiles/ITKPDEDeformableRegistrationHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 57%] Generating test/ITKPDEDeformableRegistrationHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/PDEDeformable && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKPDEDeformableRegistration /<>/Modules/Registration/PDEDeformable /<>/BUILD/Modules/Registration/PDEDeformable 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/PDEDeformable /<>/BUILD /<>/BUILD/Modules/Registration/PDEDeformable /<>/BUILD/Modules/Registration/PDEDeformable/CMakeFiles/ITKPDEDeformableRegistrationHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPDEDeformableRegistrationHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/PDEDeformable/CMakeFiles/ITKPDEDeformableRegistrationHeaderTest1.dir/build.make Modules/Registration/PDEDeformable/CMakeFiles/ITKPDEDeformableRegistrationHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/PDEDeformable/CMakeFiles/ITKPDEDeformableRegistrationHeaderTest1.dir/test/ITKPDEDeformableRegistrationHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearHexahedron.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement3DC0LinearHexahedron.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearHexahedronMembrane.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearHexahedronMembrane.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement3DC0LinearHexahedronMembrane.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearHexahedronStrain.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/PDEDeformable && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPDEDeformableRegistrationHeaderTest1.dir/test/ITKPDEDeformableRegistrationHeaderTest1.cxx.o -c /<>/BUILD/Modules/Registration/PDEDeformable/test/ITKPDEDeformableRegistrationHeaderTest1.cxx In file included from /<>/BUILD/Modules/Registration/PDEDeformable/test/ITKPDEDeformableRegistrationHeaderTest1.cxx:23: In file included from /<>/Modules/Registration/PDEDeformable/include/itkLevelSetMotionRegistrationFilter.hxx:20: In file included from /<>/Modules/Registration/PDEDeformable/include/itkLevelSetMotionRegistrationFilter.h:21: In file included from /<>/Modules/Registration/PDEDeformable/include/itkPDEDeformableRegistrationFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../bin/ITKPDEDeformableRegistrationHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/PDEDeformable && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKPDEDeformableRegistrationHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKPDEDeformableRegistrationHeaderTest1.dir/test/ITKPDEDeformableRegistrationHeaderTest1.cxx.o -o ../../../bin/ITKPDEDeformableRegistrationHeaderTest1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKPDEDeformableRegistrationHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/PDEDeformable/test/CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/build.make Modules/Registration/PDEDeformable/test/CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/PDEDeformable/test /<>/BUILD /<>/BUILD/Modules/Registration/PDEDeformable/test /<>/BUILD/Modules/Registration/PDEDeformable/test/CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPDEDeformableRegistrationTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/PDEDeformable/test/CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/build.make Modules/Registration/PDEDeformable/test/CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/PDEDeformable/test/CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/ITKPDEDeformableRegistrationTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearHexahedronStrain.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement3DC0LinearHexahedronStrain.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTetrahedron.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTetrahedron.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement3DC0LinearTetrahedron.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTetrahedronMembrane.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/itkPolygonGroupSpatialObjectXMLFileTest.cxx.o -c /<>/Modules/IO/SpatialObjects/test/itkPolygonGroupSpatialObjectXMLFileTest.cxx In file included from /<>/Modules/IO/SpatialObjects/test/itkPolygonGroupSpatialObjectXMLFileTest.cxx:20: In file included from /<>/Modules/IO/SpatialObjects/include/itkPolygonGroupSpatialObjectXMLFile.h:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkPolygonGroupSpatialObject.h:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkGroupSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/SpatialObjects/test/CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/itkReadWriteSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTetrahedronMembrane.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement3DC0LinearTetrahedronMembrane.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTetrahedronStrain.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTetrahedronStrain.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement3DC0LinearTetrahedronStrain.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTriangular.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTriangular.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement3DC0LinearTriangular.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTriangularLaplaceBeltrami.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTriangularLaplaceBeltrami.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement3DC0LinearTriangularLaplaceBeltrami.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTriangularMembrane.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTriangularMembrane.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElement3DC0LinearTriangularMembrane.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMElementBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMElementBase.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMElementBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMException.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMException.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMException.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMFactoryBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMFactoryBase.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMFactoryBase.cxx In file included from /<>/Modules/Numerics/FEM/src/itkFEMFactoryBase.cxx:40: In file included from /<>/Modules/Numerics/FEM/include/itkMetaFEMObjectConverter.h:23: In file included from /<>/Modules/Numerics/FEM/include/itkFEMObjectSpatialObject.h:24: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMItpackSparseMatrix.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMItpackSparseMatrix.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMItpackSparseMatrix.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLightObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLightObject.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLightObject.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapper.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapper.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLinearSystemWrapper.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapperDenseVNL.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapperDenseVNL.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLinearSystemWrapperDenseVNL.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapperItpack.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapperItpack.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLinearSystemWrapperItpack.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapperVNL.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapperVNL.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLinearSystemWrapperVNL.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadBC.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLoadBC.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLoadBC.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadBCMFC.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLoadBCMFC.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLoadBCMFC.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLoadBase.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLoadBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadEdge.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLoadEdge.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLoadEdge.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadElementBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLoadElementBase.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLoadElementBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadGrav.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLoadGrav.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLoadGrav.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadLandmark.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLoadLandmark.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLoadLandmark.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadNoisyLandmark.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/itkReadWriteSpatialObjectTest.cxx.o -c /<>/Modules/IO/SpatialObjects/test/itkReadWriteSpatialObjectTest.cxx In file included from /<>/Modules/IO/SpatialObjects/test/itkReadWriteSpatialObjectTest.cxx:19: In file included from /<>/Modules/IO/SpatialObjects/include/itkSpatialObjectWriter.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaSceneConverter.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSceneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/SpatialObjects/test/CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/itkReadVesselTubeSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLoadNoisyLandmark.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLoadNoisyLandmark.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadNode.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLoadNode.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLoadNode.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMLoadPoint.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMLoadPoint.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMLoadPoint.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMMaterialBase.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMMaterialBase.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMMaterialBase.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMMaterialLinearElasticity.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMMaterialLinearElasticity.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMMaterialLinearElasticity.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/itkFEMUtility.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/c++ -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKFEM.dir/itkFEMUtility.cxx.o -c /<>/Modules/Numerics/FEM/src/itkFEMUtility.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building C object Modules/Numerics/FEM/src/CMakeFiles/ITKFEM.dir/dsrc2c.c.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/cc -DITKFEM_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wno-uninitialized -Wno-unused-parameter -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -fPIC -fvisibility=hidden -o CMakeFiles/ITKFEM.dir/dsrc2c.c.o -c /<>/Modules/Numerics/FEM/src/dsrc2c.c make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX shared library ../../../../lib/libITKFEM-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFEM.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKFEM-4.12.so.1 -o ../../../../lib/libITKFEM-4.12.so.1 CMakeFiles/ITKFEM.dir/itkFEMSolution.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearLine.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearLineStress.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearQuadrilateral.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearQuadrilateralMembrane.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearQuadrilateralStrain.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearQuadrilateralStress.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearTriangular.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearTriangularMembrane.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearTriangularStrain.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0LinearTriangularStress.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0QuadraticTriangular.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0QuadraticTriangularStrain.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC0QuadraticTriangularStress.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement2DC1Beam.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearHexahedron.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearHexahedronMembrane.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearHexahedronStrain.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTetrahedron.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTetrahedronMembrane.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTetrahedronStrain.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTriangular.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTriangularLaplaceBeltrami.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElement3DC0LinearTriangularMembrane.cxx.o CMakeFiles/ITKFEM.dir/itkFEMElementBase.cxx.o CMakeFiles/ITKFEM.dir/itkFEMException.cxx.o CMakeFiles/ITKFEM.dir/itkFEMFactoryBase.cxx.o CMakeFiles/ITKFEM.dir/itkFEMItpackSparseMatrix.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLightObject.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapper.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapperDenseVNL.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapperItpack.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLinearSystemWrapperVNL.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLoadBC.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLoadBCMFC.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLoadBase.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLoadEdge.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLoadElementBase.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLoadGrav.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLoadLandmark.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLoadNoisyLandmark.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLoadNode.cxx.o CMakeFiles/ITKFEM.dir/itkFEMLoadPoint.cxx.o CMakeFiles/ITKFEM.dir/itkFEMMaterialBase.cxx.o CMakeFiles/ITKFEM.dir/itkFEMMaterialLinearElasticity.cxx.o CMakeFiles/ITKFEM.dir/itkFEMUtility.cxx.o CMakeFiles/ITKFEM.dir/dsrc2c.c.o ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 -lm -lz make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKFEM-4.12.so.1 ../../../../lib/libITKFEM-4.12.so.1 ../../../../lib/libITKFEM-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKFEM make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Mesh/test/CMakeFiles/ITKIOMeshTestDriver.dir/build.make Modules/IO/Mesh/test/CMakeFiles/ITKIOMeshTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Mesh/test /<>/BUILD /<>/BUILD/Modules/IO/Mesh/test /<>/BUILD/Modules/IO/Mesh/test/CMakeFiles/ITKIOMeshTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMeshTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Mesh/test/CMakeFiles/ITKIOMeshTestDriver.dir/build.make Modules/IO/Mesh/test/CMakeFiles/ITKIOMeshTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/Mesh/test/CMakeFiles/ITKIOMeshTestDriver.dir/ITKIOMeshTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/PDEDeformable/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/PDEDeformable/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/ITKPDEDeformableRegistrationTestDriver.cxx.o -c /<>/BUILD/Modules/Registration/PDEDeformable/test/ITKPDEDeformableRegistrationTestDriver.cxx In file included from /<>/BUILD/Modules/Registration/PDEDeformable/test/ITKPDEDeformableRegistrationTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/PDEDeformable/test/CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/itkMultiResolutionPDEDeformableRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/SpatialObjects/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/itkReadVesselTubeSpatialObjectTest.cxx.o -c /<>/Modules/IO/SpatialObjects/test/itkReadVesselTubeSpatialObjectTest.cxx In file included from /<>/Modules/IO/SpatialObjects/test/itkReadVesselTubeSpatialObjectTest.cxx:19: In file included from /<>/Modules/IO/SpatialObjects/include/itkSpatialObjectReader.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaSceneConverter.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSceneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../../bin/ITKIOSpatialObjectsTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/SpatialObjects/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/ITKIOSpatialObjectsTestDriver.cxx.o CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/itkPolygonGroupSpatialObjectXMLFileTest.cxx.o CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/itkReadWriteSpatialObjectTest.cxx.o CMakeFiles/ITKIOSpatialObjectsTestDriver.dir/itkReadVesselTubeSpatialObjectTest.cxx.o -o ../../../../bin/ITKIOSpatialObjectsTestDriver ../../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../../lib/libITKIOXML-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKIOSpatialObjectsTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Mesh/CMakeFiles/ITKIOMeshHeaderTest1.dir/build.make Modules/IO/Mesh/CMakeFiles/ITKIOMeshHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 57%] Generating test/ITKIOMeshHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOMesh /<>/Modules/IO/Mesh /<>/BUILD/Modules/IO/Mesh 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Mesh /<>/BUILD /<>/BUILD/Modules/IO/Mesh /<>/BUILD/Modules/IO/Mesh/CMakeFiles/ITKIOMeshHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMeshHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Mesh/CMakeFiles/ITKIOMeshHeaderTest1.dir/build.make Modules/IO/Mesh/CMakeFiles/ITKIOMeshHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/Mesh/CMakeFiles/ITKIOMeshHeaderTest1.dir/test/ITKIOMeshHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMeshHeaderTest1.dir/test/ITKIOMeshHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/Mesh/test/ITKIOMeshHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/Mesh/test/ITKIOMeshHeaderTest1.cxx:23: In file included from /<>/Modules/IO/Mesh/include/itkMeshFileWriter.hxx:23: In file included from /<>/Modules/IO/Mesh/include/itkMeshConvertPixelTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../bin/ITKIOMeshHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOMeshHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOMeshHeaderTest1.dir/test/ITKIOMeshHeaderTest1.cxx.o -o ../../../bin/ITKIOMeshHeaderTest1 ../../../lib/libITKIOMesh-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKIOMeshHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/CSV/test/CMakeFiles/ITKIOCSVTestDriver.dir/build.make Modules/IO/CSV/test/CMakeFiles/ITKIOCSVTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/CSV/test /<>/BUILD /<>/BUILD/Modules/IO/CSV/test /<>/BUILD/Modules/IO/CSV/test/CMakeFiles/ITKIOCSVTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOCSVTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/CSV/test/CMakeFiles/ITKIOCSVTestDriver.dir/build.make Modules/IO/CSV/test/CMakeFiles/ITKIOCSVTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/CSV/test/CMakeFiles/ITKIOCSVTestDriver.dir/ITKIOCSVTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/PDEDeformable/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/PDEDeformable/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/itkMultiResolutionPDEDeformableRegistrationTest.cxx.o -c /<>/Modules/Registration/PDEDeformable/test/itkMultiResolutionPDEDeformableRegistrationTest.cxx In file included from /<>/Modules/Registration/PDEDeformable/test/itkMultiResolutionPDEDeformableRegistrationTest.cxx:19: In file included from /<>/Modules/Registration/PDEDeformable/include/itkMultiResolutionPDEDeformableRegistration.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/PDEDeformable/test/CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/itkDemonsRegistrationFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/PDEDeformable/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/PDEDeformable/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/itkDemonsRegistrationFilterTest.cxx.o -c /<>/Modules/Registration/PDEDeformable/test/itkDemonsRegistrationFilterTest.cxx In file included from /<>/Modules/Registration/PDEDeformable/test/itkDemonsRegistrationFilterTest.cxx:19: In file included from /<>/Modules/Registration/PDEDeformable/include/itkDemonsRegistrationFilter.h:21: In file included from /<>/Modules/Registration/PDEDeformable/include/itkPDEDeformableRegistrationFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/PDEDeformable/test/CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/itkLevelSetMotionRegistrationFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMeshTestDriver.dir/ITKIOMeshTestDriver.cxx.o -c /<>/BUILD/Modules/IO/Mesh/test/ITKIOMeshTestDriver.cxx In file included from /<>/BUILD/Modules/IO/Mesh/test/ITKIOMeshTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/Mesh/test/CMakeFiles/ITKIOMeshTestDriver.dir/itkMeshFileReadWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/PDEDeformable/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/PDEDeformable/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/itkLevelSetMotionRegistrationFilterTest.cxx.o -c /<>/Modules/Registration/PDEDeformable/test/itkLevelSetMotionRegistrationFilterTest.cxx In file included from /<>/Modules/Registration/PDEDeformable/test/itkLevelSetMotionRegistrationFilterTest.cxx:19: In file included from /<>/Modules/Registration/PDEDeformable/include/itkLevelSetMotionRegistrationFilter.h:21: In file included from /<>/Modules/Registration/PDEDeformable/include/itkPDEDeformableRegistrationFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/PDEDeformable/test/CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/itkSymmetricForcesDemonsRegistrationFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/PDEDeformable/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Registration/PDEDeformable/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/itkSymmetricForcesDemonsRegistrationFilterTest.cxx.o -c /<>/Modules/Registration/PDEDeformable/test/itkSymmetricForcesDemonsRegistrationFilterTest.cxx In file included from /<>/Modules/Registration/PDEDeformable/test/itkSymmetricForcesDemonsRegistrationFilterTest.cxx:19: In file included from /<>/Modules/Registration/PDEDeformable/include/itkSymmetricForcesDemonsRegistrationFilter.h:21: In file included from /<>/Modules/Registration/PDEDeformable/include/itkPDEDeformableRegistrationFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../../bin/ITKPDEDeformableRegistrationTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/PDEDeformable/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/ITKPDEDeformableRegistrationTestDriver.cxx.o CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/itkMultiResolutionPDEDeformableRegistrationTest.cxx.o CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/itkDemonsRegistrationFilterTest.cxx.o CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/itkLevelSetMotionRegistrationFilterTest.cxx.o CMakeFiles/ITKPDEDeformableRegistrationTestDriver.dir/itkSymmetricForcesDemonsRegistrationFilterTest.cxx.o -o ../../../../bin/ITKPDEDeformableRegistrationTestDriver ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKPDEDeformableRegistrationTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/IPL/CMakeFiles/ITKIOIPL-all.dir/build.make Modules/IO/IPL/CMakeFiles/ITKIOIPL-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/IPL /<>/BUILD /<>/BUILD/Modules/IO/IPL /<>/BUILD/Modules/IO/IPL/CMakeFiles/ITKIOIPL-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOIPL-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/IPL/CMakeFiles/ITKIOIPL-all.dir/build.make Modules/IO/IPL/CMakeFiles/ITKIOIPL-all.dir/build make[3]: Nothing to be done for 'Modules/IO/IPL/CMakeFiles/ITKIOIPL-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKIOIPL-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/GE/test/CMakeFiles/ITKIOGETestDriver.dir/build.make Modules/IO/GE/test/CMakeFiles/ITKIOGETestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GE/test /<>/BUILD /<>/BUILD/Modules/IO/GE/test /<>/BUILD/Modules/IO/GE/test/CMakeFiles/ITKIOGETestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGETestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GE/test/CMakeFiles/ITKIOGETestDriver.dir/build.make Modules/IO/GE/test/CMakeFiles/ITKIOGETestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/GE/test/CMakeFiles/ITKIOGETestDriver.dir/ITKIOGETestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/CSV/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOCSVTestDriver.dir/ITKIOCSVTestDriver.cxx.o -c /<>/BUILD/Modules/IO/CSV/test/ITKIOCSVTestDriver.cxx In file included from /<>/BUILD/Modules/IO/CSV/test/ITKIOCSVTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/CSV/test/CMakeFiles/ITKIOCSVTestDriver.dir/itkCSVArray2DFileReaderTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/CSV/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOCSVTestDriver.dir/itkCSVArray2DFileReaderTest.cxx.o -c /<>/Modules/IO/CSV/test/itkCSVArray2DFileReaderTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/CSV/test/CMakeFiles/ITKIOCSVTestDriver.dir/itkCSVArray2DFileReaderWriterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/CSV/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOCSVTestDriver.dir/itkCSVArray2DFileReaderWriterTest.cxx.o -c /<>/Modules/IO/CSV/test/itkCSVArray2DFileReaderWriterTest.cxx In file included from /<>/Modules/IO/CSV/test/itkCSVArray2DFileReaderWriterTest.cxx:19: In file included from /<>/Modules/IO/CSV/include/itkCSVNumericObjectFileWriter.h:27: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/CSV/test/CMakeFiles/ITKIOCSVTestDriver.dir/itkCSVNumericObjectFileWriterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/CSV/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOCSVTestDriver.dir/itkCSVNumericObjectFileWriterTest.cxx.o -c /<>/Modules/IO/CSV/test/itkCSVNumericObjectFileWriterTest.cxx In file included from /<>/Modules/IO/CSV/test/itkCSVNumericObjectFileWriterTest.cxx:19: In file included from /<>/Modules/IO/CSV/include/itkCSVNumericObjectFileWriter.h:27: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../../bin/ITKIOCSVTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/CSV/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOCSVTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOCSVTestDriver.dir/ITKIOCSVTestDriver.cxx.o CMakeFiles/ITKIOCSVTestDriver.dir/itkCSVArray2DFileReaderTest.cxx.o CMakeFiles/ITKIOCSVTestDriver.dir/itkCSVArray2DFileReaderWriterTest.cxx.o CMakeFiles/ITKIOCSVTestDriver.dir/itkCSVNumericObjectFileWriterTest.cxx.o -o ../../../../bin/ITKIOCSVTestDriver ../../../../lib/libITKIOCSV-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKIOCSVTestDriver make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/GE/test/CMakeFiles/ITKIOGETestDriver.dir/itkGEImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/Siemens/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGETestDriver.dir/itkGEImageIOTest.cxx.o -c /<>/Modules/IO/GE/test/itkGEImageIOTest.cxx In file included from /<>/Modules/IO/GE/test/itkGEImageIOTest.cxx:19: In file included from /<>/Modules/IO/GE/include/itkGEAdwImageIO.h:37: In file included from /<>/Modules/IO/IPL/include/itkIPLCommonImageIO.h:36: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_13.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_13.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_13.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_14.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_14.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_14.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_14.cxx:20: In file included from /<>/Modules/Core/Transform/include/itkQuaternionRigidTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkQuaternionRigidTransform.h:49:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_14.cxx:141:3: note: in instantiation of template class 'itk::QuaternionRigidTransform' requested here TransformType::Pointer transform = TransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_15.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_15.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_15.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_16.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_16.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_16.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GE/CMakeFiles/ITKIOGEHeaderTest1.dir/build.make Modules/IO/GE/CMakeFiles/ITKIOGEHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOXMLTestDriver.dir/ITKIOXMLTestDriver.cxx.o -c /<>/BUILD/Modules/IO/XML/test/ITKIOXMLTestDriver.cxx In file included from /<>/BUILD/Modules/IO/XML/test/ITKIOXMLTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanSquaresPointSetToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/Mesh/test/CMakeFiles/ITKIOMeshTestDriver.dir/itkMeshFileWriteReadTensorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkGradientDifferenceImageToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Generating test/ITKIOGEHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOGE /<>/Modules/IO/GE /<>/BUILD/Modules/IO/GE 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GE /<>/BUILD /<>/BUILD/Modules/IO/GE /<>/BUILD/Modules/IO/GE/CMakeFiles/ITKIOGEHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGEHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GE/CMakeFiles/ITKIOGEHeaderTest1.dir/build.make Modules/IO/GE/CMakeFiles/ITKIOGEHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/GE/CMakeFiles/ITKIOGEHeaderTest1.dir/test/ITKIOGEHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest2.cxx.o -c /<>/Modules/IO/XML/test/itkDOMTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest1.cxx.o -c /<>/Modules/IO/XML/test/itkDOMTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/IPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/GE/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGEHeaderTest1.dir/test/ITKIOGEHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/GE/test/ITKIOGEHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/GE/test/ITKIOGEHeaderTest1.cxx:23: In file included from /<>/Modules/IO/GE/include/itkGE5ImageIO.h:37: In file included from /<>/Modules/IO/IPL/include/itkIPLCommonImageIO.h:36: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../bin/ITKIOGEHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOGEHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOGEHeaderTest1.dir/test/ITKIOGEHeaderTest1.cxx.o -o ../../../bin/ITKIOGEHeaderTest1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKIOGEHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Siemens/CMakeFiles/ITKIOSiemensHeaderTest1.dir/build.make Modules/IO/Siemens/CMakeFiles/ITKIOSiemensHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 57%] Generating test/ITKIOSiemensHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Siemens && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOSiemens /<>/Modules/IO/Siemens /<>/BUILD/Modules/IO/Siemens 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Siemens /<>/BUILD /<>/BUILD/Modules/IO/Siemens /<>/BUILD/Modules/IO/Siemens/CMakeFiles/ITKIOSiemensHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSiemensHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Siemens/CMakeFiles/ITKIOSiemensHeaderTest1.dir/build.make Modules/IO/Siemens/CMakeFiles/ITKIOSiemensHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/Siemens/CMakeFiles/ITKIOSiemensHeaderTest1.dir/test/ITKIOSiemensHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest3.cxx.o -c /<>/Modules/IO/XML/test/itkDOMTest3.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest4.cxx.o -c /<>/Modules/IO/XML/test/itkDOMTest4.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Siemens && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/IPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/Siemens/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOSiemensHeaderTest1.dir/test/ITKIOSiemensHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/Siemens/test/ITKIOSiemensHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/Siemens/test/ITKIOSiemensHeaderTest1.cxx:23: In file included from /<>/Modules/IO/Siemens/include/itkSiemensVisionImageIO.h:38: In file included from /<>/Modules/IO/IPL/include/itkIPLCommonImageIO.h:36: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Linking CXX executable ../../../bin/ITKIOSiemensHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Siemens && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOSiemensHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOSiemensHeaderTest1.dir/test/ITKIOSiemensHeaderTest1.cxx.o -o ../../../bin/ITKIOSiemensHeaderTest1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 57%] Built target ITKIOSiemensHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/HDF5/test/CMakeFiles/ITKIOHDF5TestDriver.dir/build.make Modules/IO/HDF5/test/CMakeFiles/ITKIOHDF5TestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/HDF5/test /<>/BUILD /<>/BUILD/Modules/IO/HDF5/test /<>/BUILD/Modules/IO/HDF5/test/CMakeFiles/ITKIOHDF5TestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOHDF5TestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/HDF5/test/CMakeFiles/ITKIOHDF5TestDriver.dir/build.make Modules/IO/HDF5/test/CMakeFiles/ITKIOHDF5TestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/HDF5/test/CMakeFiles/ITKIOHDF5TestDriver.dir/ITKIOHDF5TestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest6.cxx.o -c /<>/Modules/IO/XML/test/itkDOMTest6.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 57%] Building CXX object Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest7.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest5.cxx.o -c /<>/Modules/IO/XML/test/itkDOMTest5.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/IO/XML/test/CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest8.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMeshTestDriver.dir/itkMeshFileReadWriteTest.cxx.o -c /<>/Modules/IO/Mesh/test/itkMeshFileReadWriteTest.cxx In file included from /<>/Modules/IO/Mesh/test/itkMeshFileReadWriteTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/IO/Mesh/test/CMakeFiles/ITKIOMeshTestDriver.dir/itkMeshFileReadWriteVectorAttributeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest8.cxx.o -c /<>/Modules/IO/XML/test/itkDOMTest8.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/IO/Mesh/test/CMakeFiles/ITKIOMeshTestDriver.dir/itkPolylineReadWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/XML/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest7.cxx.o -c /<>/Modules/IO/XML/test/itkDOMTest7.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Linking CXX executable ../../../../bin/ITKIOXMLTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/XML/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOXMLTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOXMLTestDriver.dir/ITKIOXMLTestDriver.cxx.o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest1.cxx.o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest2.cxx.o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest3.cxx.o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest4.cxx.o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest5.cxx.o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest6.cxx.o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest7.cxx.o CMakeFiles/ITKIOXMLTestDriver.dir/itkDOMTest8.cxx.o -o ../../../../bin/ITKIOXMLTestDriver ../../../../lib/libITKIOXML-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 58%] Built target ITKIOXMLTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/MRC/test/CMakeFiles/ITKIOMRCTestDriver.dir/build.make Modules/IO/MRC/test/CMakeFiles/ITKIOMRCTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMeshTestDriver.dir/itkMeshFileWriteReadTensorTest.cxx.o -c /<>/Modules/IO/Mesh/test/itkMeshFileWriteReadTensorTest.cxx In file included from /<>/Modules/IO/Mesh/test/itkMeshFileWriteReadTensorTest.cxx:18: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/RAW/test/CMakeFiles/ITKIORAWTestDriver.dir/build.make Modules/IO/RAW/test/CMakeFiles/ITKIORAWTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/MRC/test /<>/BUILD /<>/BUILD/Modules/IO/MRC/test /<>/BUILD/Modules/IO/MRC/test/CMakeFiles/ITKIOMRCTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMRCTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/MRC/test/CMakeFiles/ITKIOMRCTestDriver.dir/build.make Modules/IO/MRC/test/CMakeFiles/ITKIOMRCTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/IO/MRC/test/CMakeFiles/ITKIOMRCTestDriver.dir/ITKIOMRCTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/RAW/test /<>/BUILD /<>/BUILD/Modules/IO/RAW/test /<>/BUILD/Modules/IO/RAW/test/CMakeFiles/ITKIORAWTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIORAWTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/RAW/test/CMakeFiles/ITKIORAWTestDriver.dir/build.make Modules/IO/RAW/test/CMakeFiles/ITKIORAWTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/IO/RAW/test/CMakeFiles/ITKIORAWTestDriver.dir/ITKIORAWTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanSquaresPointSetToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkMeanSquaresPointSetToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkMeanSquaresPointSetToImageMetricTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkHistogramImageToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkGradientDifferenceImageToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkGradientDifferenceImageToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkGradientDifferenceImageToImageMetricTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkGradientDifferenceImageToImageMetric.h:21: In file included from /<>/Modules/Registration/Common/include/itkImageToImageMetric.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMutualInformationHistogramImageToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/Siemens/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOGETestDriver.dir/ITKIOGETestDriver.cxx.o -c /<>/BUILD/Modules/IO/GE/test/ITKIOGETestDriver.cxx In file included from /<>/BUILD/Modules/IO/GE/test/ITKIOGETestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Linking CXX executable ../../../../bin/ITKIOGETestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/GE/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOGETestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOGETestDriver.dir/ITKIOGETestDriver.cxx.o CMakeFiles/ITKIOGETestDriver.dir/itkGEImageIOTest.cxx.o -o ../../../../bin/ITKIOGETestDriver ../../../../lib/libITKIOGE-4.12.so.1 ../../../../lib/libITKIOSiemens-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKIOIPL-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 58%] Built target ITKIOGETestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformFactory/test/CMakeFiles/ITKTransformFactoryTestDriver.dir/build.make Modules/IO/TransformFactory/test/CMakeFiles/ITKTransformFactoryTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMeshTestDriver.dir/itkPolylineReadWriteTest.cxx.o -c /<>/Modules/IO/Mesh/test/itkPolylineReadWriteTest.cxx In file included from /<>/Modules/IO/Mesh/test/itkPolylineReadWriteTest.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformBase/test/CMakeFiles/ITKIOTransformBaseTestDriver.dir/build.make Modules/IO/TransformBase/test/CMakeFiles/ITKIOTransformBaseTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformFactory/test /<>/BUILD /<>/BUILD/Modules/IO/TransformFactory/test /<>/BUILD/Modules/IO/TransformFactory/test/CMakeFiles/ITKTransformFactoryTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTransformFactoryTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformFactory/test/CMakeFiles/ITKTransformFactoryTestDriver.dir/build.make Modules/IO/TransformFactory/test/CMakeFiles/ITKTransformFactoryTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformBase/test /<>/BUILD /<>/BUILD/Modules/IO/TransformBase/test /<>/BUILD/Modules/IO/TransformBase/test/CMakeFiles/ITKIOTransformBaseTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformBaseTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformBase/test/CMakeFiles/ITKIOTransformBaseTestDriver.dir/build.make Modules/IO/TransformBase/test/CMakeFiles/ITKIOTransformBaseTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/IO/TransformFactory/test/CMakeFiles/ITKTransformFactoryTestDriver.dir/ITKTransformFactoryTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/IO/TransformBase/test/CMakeFiles/ITKIOTransformBaseTestDriver.dir/ITKIOTransformBaseTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkHistogramImageToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkHistogramImageToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkHistogramImageToImageMetricTest.cxx:19: In file included from /<>/Modules/Filtering/ImageSources/include/itkGaussianImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkParametricImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkGenerateImageSource.h:22: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanReciprocalSquareDifferencePointSetToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMutualInformationHistogramImageToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkMutualInformationHistogramImageToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkMutualInformationHistogramImageToImageMetricTest.cxx:19: In file included from /<>/Modules/Filtering/ImageSources/include/itkGaussianImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkParametricImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkGenerateImageSource.h:22: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMultiResolutionImageRegistrationMethodTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanReciprocalSquareDifferencePointSetToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkMeanReciprocalSquareDifferencePointSetToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkMeanReciprocalSquareDifferencePointSetToImageMetricTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkCompareHistogramImageToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/HDF5/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/HDF5/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOHDF5TestDriver.dir/ITKIOHDF5TestDriver.cxx.o -c /<>/BUILD/Modules/IO/HDF5/test/ITKIOHDF5TestDriver.cxx In file included from /<>/BUILD/Modules/IO/HDF5/test/ITKIOHDF5TestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Building CXX object Modules/IO/HDF5/test/CMakeFiles/ITKIOHDF5TestDriver.dir/itkHDF5ImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMeshTestDriver.dir/itkMeshFileReadWriteVectorAttributeTest.cxx.o -c /<>/Modules/IO/Mesh/test/itkMeshFileReadWriteVectorAttributeTest.cxx In file included from /<>/Modules/IO/Mesh/test/itkMeshFileReadWriteVectorAttributeTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 58%] Linking CXX executable ../../../../bin/ITKIOMeshTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/Mesh/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOMeshTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOMeshTestDriver.dir/ITKIOMeshTestDriver.cxx.o CMakeFiles/ITKIOMeshTestDriver.dir/itkMeshFileReadWriteTest.cxx.o CMakeFiles/ITKIOMeshTestDriver.dir/itkMeshFileWriteReadTensorTest.cxx.o CMakeFiles/ITKIOMeshTestDriver.dir/itkMeshFileReadWriteVectorAttributeTest.cxx.o CMakeFiles/ITKIOMeshTestDriver.dir/itkPolylineReadWriteTest.cxx.o -o ../../../../bin/ITKIOMeshTestDriver ../../../../lib/libITKIOMesh-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 58%] Built target ITKIOMeshTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformBase/CMakeFiles/ITKIOTransformBaseHeaderTest1.dir/build.make Modules/IO/TransformBase/CMakeFiles/ITKIOTransformBaseHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 59%] Generating test/ITKIOTransformBaseHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOTransformBase /<>/Modules/IO/TransformBase /<>/BUILD/Modules/IO/TransformBase 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformBase /<>/BUILD /<>/BUILD/Modules/IO/TransformBase /<>/BUILD/Modules/IO/TransformBase/CMakeFiles/ITKIOTransformBaseHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformBaseHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformBase/CMakeFiles/ITKIOTransformBaseHeaderTest1.dir/build.make Modules/IO/TransformBase/CMakeFiles/ITKIOTransformBaseHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/TransformBase/CMakeFiles/ITKIOTransformBaseHeaderTest1.dir/test/ITKIOTransformBaseHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase && /usr/bin/c++ -DITK_TRANSFORM_FACTORY_MAX_DIM=4 -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformBaseHeaderTest1.dir/test/ITKIOTransformBaseHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/TransformBase/test/ITKIOTransformBaseHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/TransformBase/test/ITKIOTransformBaseHeaderTest1.cxx:23: In file included from /<>/Modules/IO/TransformBase/include/itkCompositeTransformIOHelper.hxx:21: In file included from /<>/Modules/IO/TransformBase/include/itkCompositeTransformIOHelper.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Linking CXX executable ../../../bin/ITKIOTransformBaseHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformBaseHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOTransformBaseHeaderTest1.dir/test/ITKIOTransformBaseHeaderTest1.cxx.o -o ../../../bin/ITKIOTransformBaseHeaderTest1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 59%] Built target ITKIOTransformBaseHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformHDF5/src/CMakeFiles/ITKIOTransformHDF5.dir/build.make Modules/IO/TransformHDF5/src/CMakeFiles/ITKIOTransformHDF5.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformHDF5/src /<>/BUILD /<>/BUILD/Modules/IO/TransformHDF5/src /<>/BUILD/Modules/IO/TransformHDF5/src/CMakeFiles/ITKIOTransformHDF5.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformHDF5 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformHDF5/src/CMakeFiles/ITKIOTransformHDF5.dir/build.make Modules/IO/TransformHDF5/src/CMakeFiles/ITKIOTransformHDF5.dir/build make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/TransformHDF5/src/CMakeFiles/ITKIOTransformHDF5.dir/itkHDF5TransformIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/RAW/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/RAW/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIORAWTestDriver.dir/ITKIORAWTestDriver.cxx.o -c /<>/BUILD/Modules/IO/RAW/test/ITKIORAWTestDriver.cxx In file included from /<>/BUILD/Modules/IO/RAW/test/ITKIORAWTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/RAW/test/CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/MRC/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/MRC/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMRCTestDriver.dir/ITKIOMRCTestDriver.cxx.o -c /<>/BUILD/Modules/IO/MRC/test/ITKIOMRCTestDriver.cxx In file included from /<>/BUILD/Modules/IO/MRC/test/ITKIOMRCTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/MRC/test/CMakeFiles/ITKIOMRCTestDriver.dir/itkMRCImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformHDF5/src && /usr/bin/c++ -DITKIOTransformHDF5_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTransformHDF5.dir/itkHDF5TransformIO.cxx.o -c /<>/Modules/IO/TransformHDF5/src/itkHDF5TransformIO.cxx In file included from /<>/Modules/IO/TransformHDF5/src/itkHDF5TransformIO.cxx:20: In file included from /<>/Modules/IO/TransformHDF5/include/itkHDF5TransformIO.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/TransformHDF5/src/CMakeFiles/ITKIOTransformHDF5.dir/itkHDF5TransformIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMultiResolutionImageRegistrationMethodTest.cxx.o -c /<>/Modules/Registration/Common/test/itkMultiResolutionImageRegistrationMethodTest.cxx In file included from /<>/Modules/Registration/Common/test/itkMultiResolutionImageRegistrationMethodTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkMultiResolutionImageRegistrationMethod.h:22: In file included from /<>/Modules/Registration/Common/include/itkImageToImageMetric.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanSquaresHistogramImageToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformHDF5/src && /usr/bin/c++ -DITKIOTransformHDF5_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTransformHDF5.dir/itkHDF5TransformIOFactory.cxx.o -c /<>/Modules/IO/TransformHDF5/src/itkHDF5TransformIOFactory.cxx In file included from /<>/Modules/IO/TransformHDF5/src/itkHDF5TransformIOFactory.cxx:18: In file included from /<>/Modules/IO/TransformHDF5/include/itkHDF5TransformIOFactory.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Linking CXX shared library ../../../../lib/libITKIOTransformHDF5-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformHDF5/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformHDF5.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOTransformHDF5-4.12.so.1 -o ../../../../lib/libITKIOTransformHDF5-4.12.so.1 CMakeFiles/ITKIOTransformHDF5.dir/itkHDF5TransformIO.cxx.o CMakeFiles/ITKIOTransformHDF5.dir/itkHDF5TransformIOFactory.cxx.o ../../../../lib/libITKIOTransformBase-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformHDF5/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../../lib/libITKIOTransformHDF5-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 59%] Built target ITKIOTransformHDF5 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformInsightLegacy/src/CMakeFiles/ITKIOTransformInsightLegacy.dir/build.make Modules/IO/TransformInsightLegacy/src/CMakeFiles/ITKIOTransformInsightLegacy.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformInsightLegacy/src /<>/BUILD /<>/BUILD/Modules/IO/TransformInsightLegacy/src /<>/BUILD/Modules/IO/TransformInsightLegacy/src/CMakeFiles/ITKIOTransformInsightLegacy.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformInsightLegacy make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformInsightLegacy/src/CMakeFiles/ITKIOTransformInsightLegacy.dir/build.make Modules/IO/TransformInsightLegacy/src/CMakeFiles/ITKIOTransformInsightLegacy.dir/build make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/TransformInsightLegacy/src/CMakeFiles/ITKIOTransformInsightLegacy.dir/itkTxtTransformIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkCompareHistogramImageToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkCompareHistogramImageToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkCompareHistogramImageToImageMetricTest.cxx:19: In file included from /<>/Modules/Filtering/ImageSources/include/itkGaussianImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkParametricImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkGenerateImageSource.h:22: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformInsightLegacy/src && /usr/bin/c++ -DITKIOTransformInsightLegacy_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTransformInsightLegacy.dir/itkTxtTransformIO.cxx.o -c /<>/Modules/IO/TransformInsightLegacy/src/itkTxtTransformIO.cxx In file included from /<>/Modules/IO/TransformInsightLegacy/src/itkTxtTransformIO.cxx:20: In file included from /<>/Modules/IO/TransformInsightLegacy/include/itkTxtTransformIO.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/TransformInsightLegacy/src/CMakeFiles/ITKIOTransformInsightLegacy.dir/itkTxtTransformIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/RAW/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/RAW/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest.cxx.o -c /<>/Modules/IO/RAW/test/itkRawImageIOTest.cxx In file included from /<>/Modules/IO/RAW/test/itkRawImageIOTest.cxx:20: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/RAW/test/CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformInsightLegacy/src && /usr/bin/c++ -DITKIOTransformInsightLegacy_EXPORTS -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTransformInsightLegacy.dir/itkTxtTransformIOFactory.cxx.o -c /<>/Modules/IO/TransformInsightLegacy/src/itkTxtTransformIOFactory.cxx In file included from /<>/Modules/IO/TransformInsightLegacy/src/itkTxtTransformIOFactory.cxx:18: In file included from /<>/Modules/IO/TransformInsightLegacy/include/itkTxtTransformIOFactory.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Linking CXX shared library ../../../../lib/libITKIOTransformInsightLegacy-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformInsightLegacy/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformInsightLegacy.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOTransformInsightLegacy-4.12.so.1 -o ../../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 CMakeFiles/ITKIOTransformInsightLegacy.dir/itkTxtTransformIO.cxx.o CMakeFiles/ITKIOTransformInsightLegacy.dir/itkTxtTransformIOFactory.cxx.o ../../../../lib/libITKIOTransformBase-4.12.so.1 -ldouble-conversion ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformInsightLegacy/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../../lib/libITKIOTransformInsightLegacy-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 59%] Built target ITKIOTransformInsightLegacy make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformMatlab/src/CMakeFiles/ITKIOTransformMatlab.dir/build.make Modules/IO/TransformMatlab/src/CMakeFiles/ITKIOTransformMatlab.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformMatlab/src /<>/BUILD /<>/BUILD/Modules/IO/TransformMatlab/src /<>/BUILD/Modules/IO/TransformMatlab/src/CMakeFiles/ITKIOTransformMatlab.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformMatlab make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformMatlab/src/CMakeFiles/ITKIOTransformMatlab.dir/build.make Modules/IO/TransformMatlab/src/CMakeFiles/ITKIOTransformMatlab.dir/build make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/TransformMatlab/src/CMakeFiles/ITKIOTransformMatlab.dir/itkMatlabTransformIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformMatlab/src && /usr/bin/c++ -DITKIOTransformMatlab_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTransformMatlab.dir/itkMatlabTransformIO.cxx.o -c /<>/Modules/IO/TransformMatlab/src/itkMatlabTransformIO.cxx In file included from /<>/Modules/IO/TransformMatlab/src/itkMatlabTransformIO.cxx:20: In file included from /<>/Modules/IO/TransformMatlab/include/itkMatlabTransformIO.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/TransformMatlab/src/CMakeFiles/ITKIOTransformMatlab.dir/itkMatlabTransformIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/HDF5/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/HDF5/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOHDF5TestDriver.dir/itkHDF5ImageIOTest.cxx.o -c /<>/Modules/IO/HDF5/test/itkHDF5ImageIOTest.cxx In file included from /<>/Modules/IO/HDF5/test/itkHDF5ImageIOTest.cxx:19: In file included from /<>/Modules/IO/HDF5/include/itkHDF5ImageIO.h:45: In file included from /<>/Modules/IO/ImageBase/include/itkStreamingImageIOBase.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/HDF5/test/CMakeFiles/ITKIOHDF5TestDriver.dir/itkHDF5ImageIOStreamingReadWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformMatlab/src && /usr/bin/c++ -DITKIOTransformMatlab_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -o CMakeFiles/ITKIOTransformMatlab.dir/itkMatlabTransformIOFactory.cxx.o -c /<>/Modules/IO/TransformMatlab/src/itkMatlabTransformIOFactory.cxx In file included from /<>/Modules/IO/TransformMatlab/src/itkMatlabTransformIOFactory.cxx:18: In file included from /<>/Modules/IO/TransformMatlab/include/itkMatlabTransformIOFactory.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Linking CXX shared library ../../../../lib/libITKIOTransformMatlab-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformMatlab/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformMatlab.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKIOTransformMatlab-4.12.so.1 -o ../../../../lib/libITKIOTransformMatlab-4.12.so.1 CMakeFiles/ITKIOTransformMatlab.dir/itkMatlabTransformIO.cxx.o CMakeFiles/ITKIOTransformMatlab.dir/itkMatlabTransformIOFactory.cxx.o ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformMatlab/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../../lib/libITKIOTransformMatlab-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 59%] Built target ITKIOTransformMatlab make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFusion/CMakeFiles/ITKImageFusion-all.dir/build.make Modules/Filtering/ImageFusion/CMakeFiles/ITKImageFusion-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFusion /<>/BUILD /<>/BUILD/Modules/Filtering/ImageFusion /<>/BUILD/Modules/Filtering/ImageFusion/CMakeFiles/ITKImageFusion-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFusion-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFusion/CMakeFiles/ITKImageFusion-all.dir/build.make Modules/Filtering/ImageFusion/CMakeFiles/ITKImageFusion-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/ImageFusion/CMakeFiles/ITKImageFusion-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 59%] Built target ITKImageFusion-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageNoise/CMakeFiles/ITKImageNoise-all.dir/build.make Modules/Filtering/ImageNoise/CMakeFiles/ITKImageNoise-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageNoise /<>/BUILD /<>/BUILD/Modules/Filtering/ImageNoise /<>/BUILD/Modules/Filtering/ImageNoise/CMakeFiles/ITKImageNoise-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageNoise-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageNoise/CMakeFiles/ITKImageNoise-all.dir/build.make Modules/Filtering/ImageNoise/CMakeFiles/ITKImageNoise-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/ImageNoise/CMakeFiles/ITKImageNoise-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 59%] Built target ITKImageNoise-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest4.dir/build.make Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest4.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/IntegratedTest/test /<>/BUILD /<>/BUILD/Modules/Nonunit/IntegratedTest/test /<>/BUILD/Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest4.dir/DependInfo.cmake --color= Scanning dependencies of target itkAlgorithmsPrintTest4 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest4.dir/build.make Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest4.dir/build make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest4.dir/itkAlgorithmsPrintTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/RAW/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/RAW/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest2.cxx.o -c /<>/Modules/IO/RAW/test/itkRawImageIOTest2.cxx In file included from /<>/Modules/IO/RAW/test/itkRawImageIOTest2.cxx:21: In file included from /<>/Modules/IO/RAW/include/itkRawImageIO.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/RAW/test/CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformFactory/test && /usr/bin/c++ -DITK_TRANSFORM_FACTORY_MAX_DIM=4 -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformFactoryTestDriver.dir/ITKTransformFactoryTestDriver.cxx.o -c /<>/BUILD/Modules/IO/TransformFactory/test/ITKTransformFactoryTestDriver.cxx In file included from /<>/BUILD/Modules/IO/TransformFactory/test/ITKTransformFactoryTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/TransformFactory/test/CMakeFiles/ITKTransformFactoryTestDriver.dir/itkTransformFactoryBaseTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanSquaresHistogramImageToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkMeanSquaresHistogramImageToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkMeanSquaresHistogramImageToImageMetricTest.cxx:19: In file included from /<>/Modules/Filtering/ImageSources/include/itkGaussianImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkParametricImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkGenerateImageSource.h:22: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkCorrelationCoefficientHistogramImageToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformBaseTestDriver.dir/ITKIOTransformBaseTestDriver.cxx.o -c /<>/BUILD/Modules/IO/TransformBase/test/ITKIOTransformBaseTestDriver.cxx In file included from /<>/BUILD/Modules/IO/TransformBase/test/ITKIOTransformBaseTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/TransformBase/test/CMakeFiles/ITKIOTransformBaseTestDriver.dir/itkTransformFileReaderTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformFactory/test && /usr/bin/c++ -DITK_TRANSFORM_FACTORY_MAX_DIM=4 -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKTransformFactoryTestDriver.dir/itkTransformFactoryBaseTest.cxx.o -c /<>/Modules/IO/TransformFactory/test/itkTransformFactoryBaseTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Linking CXX executable ../../../../bin/ITKTransformFactoryTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformFactory/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKTransformFactoryTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKTransformFactoryTestDriver.dir/ITKTransformFactoryTestDriver.cxx.o CMakeFiles/ITKTransformFactoryTestDriver.dir/itkTransformFactoryBaseTest.cxx.o -o ../../../../bin/ITKTransformFactoryTestDriver -ldouble-conversion ../../../../lib/libITKTransformFactory-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 59%] Built target ITKTransformFactoryTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest.dir/build.make Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/IntegratedTest/test /<>/BUILD /<>/BUILD/Modules/Nonunit/IntegratedTest/test /<>/BUILD/Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest.dir/DependInfo.cmake --color= Scanning dependencies of target itkAlgorithmsPrintTest make[3]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest.dir/build.make Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformBaseTestDriver.dir/itkTransformFileReaderTest.cxx.o -c /<>/Modules/IO/TransformBase/test/itkTransformFileReaderTest.cxx In file included from /<>/Modules/IO/TransformBase/test/itkTransformFileReaderTest.cxx:20: In file included from /<>/Modules/IO/TransformBase/include/itkTransformFileReader.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest.dir/itkAlgorithmsPrintTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/TransformBase/test/CMakeFiles/ITKIOTransformBaseTestDriver.dir/itkTransformFileWriterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkNormalizedCorrelationPointSetToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformBaseTestDriver.dir/itkTransformFileWriterTest.cxx.o -c /<>/Modules/IO/TransformBase/test/itkTransformFileWriterTest.cxx In file included from /<>/Modules/IO/TransformBase/test/itkTransformFileWriterTest.cxx:20: In file included from /<>/Modules/IO/TransformBase/include/itkTransformFileWriter.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Linking CXX executable ../../../../bin/ITKIOTransformBaseTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformBase/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformBaseTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOTransformBaseTestDriver.dir/ITKIOTransformBaseTestDriver.cxx.o CMakeFiles/ITKIOTransformBaseTestDriver.dir/itkTransformFileReaderTest.cxx.o CMakeFiles/ITKIOTransformBaseTestDriver.dir/itkTransformFileWriterTest.cxx.o -o ../../../../bin/ITKIOTransformBaseTestDriver ../../../../lib/libITKIOTransformBase-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 59%] Built target ITKIOTransformBaseTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/build.make Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/IntegratedTest/test /<>/BUILD /<>/BUILD/Modules/Nonunit/IntegratedTest/test /<>/BUILD/Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIntegratedTestTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/build.make Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/ITKIntegratedTestTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/RAW/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/RAW/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest3.cxx.o -c /<>/Modules/IO/RAW/test/itkRawImageIOTest3.cxx In file included from /<>/Modules/IO/RAW/test/itkRawImageIOTest3.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/RAW/test/CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/RAW/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/RAW/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest4.cxx.o -c /<>/Modules/IO/RAW/test/itkRawImageIOTest4.cxx In file included from /<>/Modules/IO/RAW/test/itkRawImageIOTest4.cxx:20: In file included from /<>/Modules/IO/RAW/include/itkRawImageIO.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/IO/RAW/test/CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkNormalizedCorrelationPointSetToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkNormalizedCorrelationPointSetToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkNormalizedCorrelationPointSetToImageMetricTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkKullbackLeiblerCompareHistogramImageToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/HDF5/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/HDF5/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOHDF5TestDriver.dir/itkHDF5ImageIOStreamingReadWriteTest.cxx.o -c /<>/Modules/IO/HDF5/test/itkHDF5ImageIOStreamingReadWriteTest.cxx In file included from /<>/Modules/IO/HDF5/test/itkHDF5ImageIOStreamingReadWriteTest.cxx:18: In file included from /<>/Modules/IO/HDF5/include/itkHDF5ImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Linking CXX executable ../../../../bin/ITKIOHDF5TestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkCorrelationCoefficientHistogramImageToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkCorrelationCoefficientHistogramImageToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkCorrelationCoefficientHistogramImageToImageMetricTest.cxx:19: In file included from /<>/Modules/Filtering/ImageSources/include/itkGaussianImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkParametricImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkGenerateImageSource.h:22: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkNormalizedMutualInformationHistogramImageToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/HDF5/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOHDF5TestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOHDF5TestDriver.dir/ITKIOHDF5TestDriver.cxx.o CMakeFiles/ITKIOHDF5TestDriver.dir/itkHDF5ImageIOTest.cxx.o CMakeFiles/ITKIOHDF5TestDriver.dir/itkHDF5ImageIOStreamingReadWriteTest.cxx.o -o ../../../../bin/ITKIOHDF5TestDriver ../../../../lib/libITKIOHDF5-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 59%] Built target ITKIOHDF5TestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest2.dir/build.make Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/IntegratedTest/test /<>/BUILD /<>/BUILD/Modules/Nonunit/IntegratedTest/test /<>/BUILD/Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest2.dir/DependInfo.cmake --color= Scanning dependencies of target itkAlgorithmsPrintTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest2.dir/build.make Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 59%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest2.dir/itkAlgorithmsPrintTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/RAW/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/RAW/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest5.cxx.o -c /<>/Modules/IO/RAW/test/itkRawImageIOTest5.cxx In file included from /<>/Modules/IO/RAW/test/itkRawImageIOTest5.cxx:20: In file included from /<>/Modules/IO/RAW/include/itkRawImageIO.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Linking CXX executable ../../../../bin/ITKIORAWTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/RAW/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIORAWTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIORAWTestDriver.dir/ITKIORAWTestDriver.cxx.o CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest.cxx.o CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest2.cxx.o CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest3.cxx.o CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest4.cxx.o CMakeFiles/ITKIORAWTestDriver.dir/itkRawImageIOTest5.cxx.o -o ../../../../bin/ITKIORAWTestDriver -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKIORAWTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest3.dir/build.make Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/IntegratedTest/test /<>/BUILD /<>/BUILD/Modules/Nonunit/IntegratedTest/test /<>/BUILD/Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest3.dir/DependInfo.cmake --color= Scanning dependencies of target itkAlgorithmsPrintTest3 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest3.dir/build.make Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest3.dir/build make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/itkAlgorithmsPrintTest3.dir/itkAlgorithmsPrintTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/MRC/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/MRC/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMRCTestDriver.dir/itkMRCImageIOTest.cxx.o -c /<>/Modules/IO/MRC/test/itkMRCImageIOTest.cxx In file included from /<>/Modules/IO/MRC/test/itkMRCImageIOTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/IO/MRC/test/CMakeFiles/ITKIOMRCTestDriver.dir/itkMRCImageIOTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/itkAlgorithmsPrintTest4.dir/itkAlgorithmsPrintTest4.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkAlgorithmsPrintTest4.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkAlgorithmsPrintTest4.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Linking CXX executable ../../../../bin/itkAlgorithmsPrintTest4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAlgorithmsPrintTest4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/itkAlgorithmsPrintTest4.dir/itkAlgorithmsPrintTest4.cxx.o -o ../../../../bin/itkAlgorithmsPrintTest4 ../../../../lib/libITKBiasCorrection-4.12.so.1 ../../../../lib/libITKBioCell-4.12.so.1 ../../../../lib/libITKFEM-4.12.so.1 ../../../../lib/libITKFFT-4.12.so.1 ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOGE-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOSiemens-4.12.so.1 ../../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../../lib/libITKIOXML-4.12.so.1 ../../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKPolynomials-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKVTK-4.12.so.1 ../../../../lib/libITKWatersheds-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOIPL-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 60%] Built target itkAlgorithmsPrintTest4 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/KLMRegionGrowing/CMakeFiles/ITKKLMRegionGrowing-all.dir/build.make Modules/Segmentation/KLMRegionGrowing/CMakeFiles/ITKKLMRegionGrowing-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/KLMRegionGrowing /<>/BUILD /<>/BUILD/Modules/Segmentation/KLMRegionGrowing /<>/BUILD/Modules/Segmentation/KLMRegionGrowing/CMakeFiles/ITKKLMRegionGrowing-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKKLMRegionGrowing-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/KLMRegionGrowing/CMakeFiles/ITKKLMRegionGrowing-all.dir/build.make Modules/Segmentation/KLMRegionGrowing/CMakeFiles/ITKKLMRegionGrowing-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/KLMRegionGrowing/CMakeFiles/ITKKLMRegionGrowing-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKKLMRegionGrowing-all make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkPointSetToSpatialObjectDemonsRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkKullbackLeiblerCompareHistogramImageToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkKullbackLeiblerCompareHistogramImageToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkKullbackLeiblerCompareHistogramImageToImageMetricTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkKullbackLeiblerCompareHistogramImageToImageMetric.h:21: In file included from /<>/Modules/Registration/Common/include/itkCompareHistogramImageToImageMetric.h:21: In file included from /<>/Modules/Registration/Common/include/itkHistogramImageToImageMetric.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkPointSetToImageRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/MRC/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/MRC/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/ImageSources/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOMRCTestDriver.dir/itkMRCImageIOTest2.cxx.o -c /<>/Modules/IO/MRC/test/itkMRCImageIOTest2.cxx In file included from /<>/Modules/IO/MRC/test/itkMRCImageIOTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Linking CXX executable ../../../../bin/ITKIOMRCTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkNormalizedMutualInformationHistogramImageToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkNormalizedMutualInformationHistogramImageToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkNormalizedMutualInformationHistogramImageToImageMetricTest.cxx:19: In file included from /<>/Modules/Filtering/ImageSources/include/itkGaussianImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkParametricImageSource.h:21: In file included from /<>/Modules/Filtering/ImageSources/include/itkGenerateImageSource.h:22: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkPointsLocatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/MRC/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOMRCTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOMRCTestDriver.dir/ITKIOMRCTestDriver.cxx.o CMakeFiles/ITKIOMRCTestDriver.dir/itkMRCImageIOTest.cxx.o CMakeFiles/ITKIOMRCTestDriver.dir/itkMRCImageIOTest2.cxx.o -o ../../../../bin/ITKIOMRCTestDriver ../../../../lib/libITKIOMRC-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKIOMRCTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LabelVoting/CMakeFiles/ITKLabelVoting-all.dir/build.make Modules/Segmentation/LabelVoting/CMakeFiles/ITKLabelVoting-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LabelVoting /<>/BUILD /<>/BUILD/Modules/Segmentation/LabelVoting /<>/BUILD/Modules/Segmentation/LabelVoting/CMakeFiles/ITKLabelVoting-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelVoting-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LabelVoting/CMakeFiles/ITKLabelVoting-all.dir/build.make Modules/Segmentation/LabelVoting/CMakeFiles/ITKLabelVoting-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/LabelVoting/CMakeFiles/ITKLabelVoting-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKLabelVoting-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/MarkovRandomFieldsClassifiers/CMakeFiles/ITKMarkovRandomFieldsClassifiers-all.dir/build.make Modules/Segmentation/MarkovRandomFieldsClassifiers/CMakeFiles/ITKMarkovRandomFieldsClassifiers-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers /<>/BUILD /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers /<>/BUILD/Modules/Segmentation/MarkovRandomFieldsClassifiers/CMakeFiles/ITKMarkovRandomFieldsClassifiers-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMarkovRandomFieldsClassifiers-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/MarkovRandomFieldsClassifiers/CMakeFiles/ITKMarkovRandomFieldsClassifiers-all.dir/build.make Modules/Segmentation/MarkovRandomFieldsClassifiers/CMakeFiles/ITKMarkovRandomFieldsClassifiers-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/MarkovRandomFieldsClassifiers/CMakeFiles/ITKMarkovRandomFieldsClassifiers-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKMarkovRandomFieldsClassifiers-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworks-all.dir/build.make Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworks-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/NeuralNetworks /<>/BUILD /<>/BUILD/Modules/Numerics/NeuralNetworks /<>/BUILD/Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworks-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNeuralNetworks-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworks-all.dir/build.make Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworks-all.dir/build make[3]: Nothing to be done for 'Modules/Numerics/NeuralNetworks/CMakeFiles/ITKNeuralNetworks-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKNeuralNetworks-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/build.make Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/QuadEdgeMeshFiltering/test /<>/BUILD /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMeshFilteringTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/build.make Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/ITKQuadEdgeMeshFilteringTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkPointsLocatorTest.cxx.o -c /<>/Modules/Registration/Common/test/itkPointsLocatorTest.cxx In file included from /<>/Modules/Registration/Common/test/itkPointsLocatorTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkPointsLocator.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkKappaStatisticImageToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/itkAlgorithmsPrintTest.dir/itkAlgorithmsPrintTest.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkAlgorithmsPrintTest.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkAlgorithmsPrintTest.cxx:20: In file included from /<>/Modules/Filtering/AntiAlias/include/itkAntiAliasBinaryImageFilter.h:20: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Linking CXX executable ../../../../bin/itkAlgorithmsPrintTest make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAlgorithmsPrintTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/itkAlgorithmsPrintTest.dir/itkAlgorithmsPrintTest.cxx.o -o ../../../../bin/itkAlgorithmsPrintTest ../../../../lib/libITKBiasCorrection-4.12.so.1 ../../../../lib/libITKBioCell-4.12.so.1 ../../../../lib/libITKFEM-4.12.so.1 ../../../../lib/libITKFFT-4.12.so.1 ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOGE-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOSiemens-4.12.so.1 ../../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../../lib/libITKIOXML-4.12.so.1 ../../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKPolynomials-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKVTK-4.12.so.1 ../../../../lib/libITKWatersheds-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOIPL-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 60%] Built target itkAlgorithmsPrintTest make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/RegionGrowing/CMakeFiles/ITKRegionGrowing-all.dir/build.make Modules/Segmentation/RegionGrowing/CMakeFiles/ITKRegionGrowing-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/RegionGrowing /<>/BUILD /<>/BUILD/Modules/Segmentation/RegionGrowing /<>/BUILD/Modules/Segmentation/RegionGrowing/CMakeFiles/ITKRegionGrowing-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegionGrowing-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/RegionGrowing/CMakeFiles/ITKRegionGrowing-all.dir/build.make Modules/Segmentation/RegionGrowing/CMakeFiles/ITKRegionGrowing-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/RegionGrowing/CMakeFiles/ITKRegionGrowing-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKRegionGrowing-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/SpatialFunction/CMakeFiles/ITKSpatialFunction-all.dir/build.make Modules/Filtering/SpatialFunction/CMakeFiles/ITKSpatialFunction-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/SpatialFunction /<>/BUILD /<>/BUILD/Modules/Filtering/SpatialFunction /<>/BUILD/Modules/Filtering/SpatialFunction/CMakeFiles/ITKSpatialFunction-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSpatialFunction-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/SpatialFunction/CMakeFiles/ITKSpatialFunction-all.dir/build.make Modules/Filtering/SpatialFunction/CMakeFiles/ITKSpatialFunction-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/SpatialFunction/CMakeFiles/ITKSpatialFunction-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKSpatialFunction-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Voronoi/CMakeFiles/ITKVoronoi-all.dir/build.make Modules/Segmentation/Voronoi/CMakeFiles/ITKVoronoi-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Voronoi /<>/BUILD /<>/BUILD/Modules/Segmentation/Voronoi /<>/BUILD/Modules/Segmentation/Voronoi/CMakeFiles/ITKVoronoi-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVoronoi-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Voronoi/CMakeFiles/ITKVoronoi-all.dir/build.make Modules/Segmentation/Voronoi/CMakeFiles/ITKVoronoi-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/Voronoi/CMakeFiles/ITKVoronoi-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKVoronoi-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Watersheds/CMakeFiles/ITKWatersheds-all.dir/build.make Modules/Segmentation/Watersheds/CMakeFiles/ITKWatersheds-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Watersheds /<>/BUILD /<>/BUILD/Modules/Segmentation/Watersheds /<>/BUILD/Modules/Segmentation/Watersheds/CMakeFiles/ITKWatersheds-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKWatersheds-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Watersheds/CMakeFiles/ITKWatersheds-all.dir/build.make Modules/Segmentation/Watersheds/CMakeFiles/ITKWatersheds-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/Watersheds/CMakeFiles/ITKWatersheds-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKWatersheds-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4-all.dir/build.make Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LevelSetsv4 /<>/BUILD /<>/BUILD/Modules/Segmentation/LevelSetsv4 /<>/BUILD/Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLevelSetsv4-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4-all.dir/build.make Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/LevelSetsv4/CMakeFiles/ITKLevelSetsv4-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKLevelSetsv4-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizersv4/CMakeFiles/ITKOptimizersv4-all.dir/build.make Modules/Numerics/Optimizersv4/CMakeFiles/ITKOptimizersv4-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizersv4 /<>/BUILD /<>/BUILD/Modules/Numerics/Optimizersv4 /<>/BUILD/Modules/Numerics/Optimizersv4/CMakeFiles/ITKOptimizersv4-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizersv4-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizersv4/CMakeFiles/ITKOptimizersv4-all.dir/build.make Modules/Numerics/Optimizersv4/CMakeFiles/ITKOptimizersv4-all.dir/build make[3]: Nothing to be done for 'Modules/Numerics/Optimizersv4/CMakeFiles/ITKOptimizersv4-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKOptimizersv4-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Metricsv4/CMakeFiles/ITKMetricsv4-all.dir/build.make Modules/Registration/Metricsv4/CMakeFiles/ITKMetricsv4-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Metricsv4 /<>/BUILD /<>/BUILD/Modules/Registration/Metricsv4 /<>/BUILD/Modules/Registration/Metricsv4/CMakeFiles/ITKMetricsv4-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMetricsv4-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Metricsv4/CMakeFiles/ITKMetricsv4-all.dir/build.make Modules/Registration/Metricsv4/CMakeFiles/ITKMetricsv4-all.dir/build make[3]: Nothing to be done for 'Modules/Registration/Metricsv4/CMakeFiles/ITKMetricsv4-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKMetricsv4-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/RegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4-all.dir/build.make Modules/Registration/RegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/RegistrationMethodsv4 /<>/BUILD /<>/BUILD/Modules/Registration/RegistrationMethodsv4 /<>/BUILD/Modules/Registration/RegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationMethodsv4-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/RegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4-all.dir/build.make Modules/Registration/RegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4-all.dir/build make[3]: Nothing to be done for 'Modules/Registration/RegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKRegistrationMethodsv4-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/Review/src/CMakeFiles/ITKReview.dir/build.make Modules/Nonunit/Review/src/CMakeFiles/ITKReview.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/Review/src /<>/BUILD /<>/BUILD/Modules/Nonunit/Review/src /<>/BUILD/Modules/Nonunit/Review/src/CMakeFiles/ITKReview.dir/DependInfo.cmake --color= Scanning dependencies of target ITKReview make[3]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/Review/src/CMakeFiles/ITKReview.dir/build.make Modules/Nonunit/Review/src/CMakeFiles/ITKReview.dir/build make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/Review/src/CMakeFiles/ITKReview.dir/itkBruker2DSEQImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkPointSetToSpatialObjectDemonsRegistrationTest.cxx.o -c /<>/Modules/Registration/Common/test/itkPointSetToSpatialObjectDemonsRegistrationTest.cxx In file included from /<>/Modules/Registration/Common/test/itkPointSetToSpatialObjectDemonsRegistrationTest.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkEllipseSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMattesMutualInformationImageToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkPointSetToImageRegistrationTest.cxx.o -c /<>/Modules/Registration/Common/test/itkPointSetToImageRegistrationTest.cxx In file included from /<>/Modules/Registration/Common/test/itkPointSetToImageRegistrationTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMatchCardinalityImageToImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/src && /usr/bin/c++ -DITKReview_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKReview.dir/itkBruker2DSEQImageIO.cxx.o -c /<>/Modules/Nonunit/Review/src/itkBruker2DSEQImageIO.cxx In file included from /<>/Modules/Nonunit/Review/src/itkBruker2DSEQImageIO.cxx:18: In file included from /<>/Modules/Nonunit/Review/include/itkBruker2DSEQImageIO.h:40: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/Review/src/CMakeFiles/ITKReview.dir/itkBruker2DSEQImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIntegratedTestTestDriver.dir/ITKIntegratedTestTestDriver.cxx.o -c /<>/BUILD/Modules/Nonunit/IntegratedTest/test/ITKIntegratedTestTestDriver.cxx In file included from /<>/BUILD/Modules/Nonunit/IntegratedTest/test/ITKIntegratedTestTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeBuiltInIOFactories.h:20: In file included from /<>/Modules/IO/BioRad/include/itkBioRadImageIOFactory.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/itkFilterImageAddTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/src && /usr/bin/c++ -DITKReview_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKReview.dir/itkBruker2DSEQImageIOFactory.cxx.o -c /<>/Modules/Nonunit/Review/src/itkBruker2DSEQImageIOFactory.cxx In file included from /<>/Modules/Nonunit/Review/src/itkBruker2DSEQImageIOFactory.cxx:18: In file included from /<>/Modules/Nonunit/Review/include/itkBruker2DSEQImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/Review/src/CMakeFiles/ITKReview.dir/itkJPEG2000ImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkKappaStatisticImageToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkKappaStatisticImageToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkKappaStatisticImageToImageMetricTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkKappaStatisticImageToImageMetric.h:21: In file included from /<>/Modules/Registration/Common/include/itkImageToImageMetric.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMultiResolutionPyramidImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkFilterImageAddTest.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkFilterImageAddTest.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkFilterImageAddTest.cxx:19: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkAddImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBinaryFunctorImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/itkNumericsPrintTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/src && /usr/bin/c++ -DITKReview_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKReview.dir/itkJPEG2000ImageIO.cxx.o -c /<>/Modules/Nonunit/Review/src/itkJPEG2000ImageIO.cxx In file included from /<>/Modules/Nonunit/Review/src/itkJPEG2000ImageIO.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkJPEG2000ImageIO.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkStreamingImageIOBase.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/Review/src/CMakeFiles/ITKReview.dir/itkJPEG2000ImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkNumericsPrintTest.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkNumericsPrintTest.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkNumericsPrintTest.cxx:28: In file included from /<>/Modules/Numerics/Optimizers/include/itkVersorTransformOptimizer.h:22: In file included from /<>/Modules/Core/Common/include/itkVersor.h:21: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/itkReleaseDataFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/src && /usr/bin/c++ -DITKReview_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKReview.dir/itkJPEG2000ImageIOFactory.cxx.o -c /<>/Modules/Nonunit/Review/src/itkJPEG2000ImageIOFactory.cxx In file included from /<>/Modules/Nonunit/Review/src/itkJPEG2000ImageIOFactory.cxx:18: In file included from /<>/Modules/Nonunit/Review/include/itkJPEG2000ImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/Review/src/CMakeFiles/ITKReview.dir/itkVoxBoCUBImageIO.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/src && /usr/bin/c++ -DITKReview_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKReview.dir/itkVoxBoCUBImageIO.cxx.o -c /<>/Modules/Nonunit/Review/src/itkVoxBoCUBImageIO.cxx In file included from /<>/Modules/Nonunit/Review/src/itkVoxBoCUBImageIO.cxx:18: In file included from /<>/Modules/Nonunit/Review/include/itkVoxBoCUBImageIO.h:25: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/Review/src/CMakeFiles/ITKReview.dir/itkVoxBoCUBImageIOFactory.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/src && /usr/bin/c++ -DITKReview_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKReview.dir/itkVoxBoCUBImageIOFactory.cxx.o -c /<>/Modules/Nonunit/Review/src/itkVoxBoCUBImageIOFactory.cxx In file included from /<>/Modules/Nonunit/Review/src/itkVoxBoCUBImageIOFactory.cxx:18: In file included from /<>/Modules/Nonunit/Review/include/itkVoxBoCUBImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Linking CXX shared library ../../../../lib/libITKReview-4.12.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/itkAlgorithmsPrintTest2.dir/itkAlgorithmsPrintTest2.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkAlgorithmsPrintTest2.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkAlgorithmsPrintTest2.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Linking CXX executable ../../../../bin/itkAlgorithmsPrintTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKReview.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKReview-4.12.so.1 -o ../../../../lib/libITKReview-4.12.so.1 CMakeFiles/ITKReview.dir/itkBruker2DSEQImageIO.cxx.o CMakeFiles/ITKReview.dir/itkBruker2DSEQImageIOFactory.cxx.o CMakeFiles/ITKReview.dir/itkJPEG2000ImageIO.cxx.o CMakeFiles/ITKReview.dir/itkJPEG2000ImageIOFactory.cxx.o CMakeFiles/ITKReview.dir/itkVoxBoCUBImageIO.cxx.o CMakeFiles/ITKReview.dir/itkVoxBoCUBImageIOFactory.cxx.o ../../../../lib/libITKBiasCorrection-4.12.so.1 ../../../../lib/libITKBioCell-4.12.so.1 ../../../../lib/libITKFEM-4.12.so.1 ../../../../lib/libITKFFT-4.12.so.1 ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGE-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOSiemens-4.12.so.1 ../../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKIOXML-4.12.so.1 ../../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKPolynomials-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 ../../../../lib/libITKVTK-4.12.so.1 ../../../../lib/libITKWatersheds-4.12.so.1 ../../../../lib/libitkopenjpeg-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOIPL-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl -lm -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/src && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libITKReview-4.12.so.1 ../../../../lib/libITKReview-4.12.so.1 ../../../../lib/libITKReview-4.12.so make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKReview make[2]: Leaving directory '/<>/BUILD' make -f Modules/Video/Core/CMakeFiles/ITKVideoCore-all.dir/build.make Modules/Video/Core/CMakeFiles/ITKVideoCore-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Video/Core /<>/BUILD /<>/BUILD/Modules/Video/Core /<>/BUILD/Modules/Video/Core/CMakeFiles/ITKVideoCore-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVideoCore-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Video/Core/CMakeFiles/ITKVideoCore-all.dir/build.make Modules/Video/Core/CMakeFiles/ITKVideoCore-all.dir/build make[3]: Nothing to be done for 'Modules/Video/Core/CMakeFiles/ITKVideoCore-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKVideoCore-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Video/IO/CMakeFiles/ITKVideoIO-all.dir/build.make Modules/Video/IO/CMakeFiles/ITKVideoIO-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Video/IO /<>/BUILD /<>/BUILD/Modules/Video/IO /<>/BUILD/Modules/Video/IO/CMakeFiles/ITKVideoIO-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVideoIO-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Video/IO/CMakeFiles/ITKVideoIO-all.dir/build.make Modules/Video/IO/CMakeFiles/ITKVideoIO-all.dir/build make[3]: Nothing to be done for 'Modules/Video/IO/CMakeFiles/ITKVideoIO-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKVideoIO-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Video/Filtering/CMakeFiles/ITKVideoFiltering-all.dir/build.make Modules/Video/Filtering/CMakeFiles/ITKVideoFiltering-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Video/Filtering /<>/BUILD /<>/BUILD/Modules/Video/Filtering /<>/BUILD/Modules/Video/Filtering/CMakeFiles/ITKVideoFiltering-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVideoFiltering-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Video/Filtering/CMakeFiles/ITKVideoFiltering-all.dir/build.make Modules/Video/Filtering/CMakeFiles/ITKVideoFiltering-all.dir/build make[3]: Nothing to be done for 'Modules/Video/Filtering/CMakeFiles/ITKVideoFiltering-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 60%] Built target ITKVideoFiltering-all make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/build.make Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 60%] Generating itkFixedArrayPython.cpp, ../../../lib/itkFixedArrayPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAlgorithmsPrintTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/itkAlgorithmsPrintTest2.dir/itkAlgorithmsPrintTest2.cxx.o -o ../../../../bin/itkAlgorithmsPrintTest2 ../../../../lib/libITKBiasCorrection-4.12.so.1 ../../../../lib/libITKBioCell-4.12.so.1 ../../../../lib/libITKFEM-4.12.so.1 ../../../../lib/libITKFFT-4.12.so.1 ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOGE-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOSiemens-4.12.so.1 ../../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../../lib/libITKIOXML-4.12.so.1 ../../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKPolynomials-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKVTK-4.12.so.1 ../../../../lib/libITKWatersheds-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOIPL-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 60%] Built target itkAlgorithmsPrintTest2 make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferencePython.dir/build.make Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferencePython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 60%] Generating itkDenseFiniteDifferenceImageFilterPython.cpp, ../../../lib/itkDenseFiniteDifferenceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkReleaseDataFilterTest.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkReleaseDataFilterTest.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkReleaseDataFilterTest.cxx:19: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/itkStatisticsPrintTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMatchCardinalityImageToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkMatchCardinalityImageToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkMatchCardinalityImageToImageMetricTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkMatchCardinalityImageToImageMetric.h:26: In file included from /<>/Modules/Registration/Common/include/itkImageToImageMetric.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMultiResolutionPyramidImageFilterTest.cxx.o -c /<>/Modules/Registration/Common/test/itkMultiResolutionPyramidImageFilterTest.cxx In file included from /<>/Modules/Registration/Common/test/itkMultiResolutionPyramidImageFilterTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkRecursiveMultiResolutionPyramidImageFilter.h:21: In file included from /<>/Modules/Registration/Common/include/itkMultiResolutionPyramidImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMattesMutualInformationImageToImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkMattesMutualInformationImageToImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkMattesMutualInformationImageToImageMetricTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkMattesMutualInformationImageToImageMetric.h:21: In file included from /<>/Modules/Registration/Common/include/itkImageToImageMetric.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/itkAlgorithmsPrintTest3.dir/itkAlgorithmsPrintTest3.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkAlgorithmsPrintTest3.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkAlgorithmsPrintTest3.cxx:19: In file included from /<>/Modules/Filtering/BiasCorrection/include/itkMRIBiasFieldCorrectionFilter.h:23: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Linking CXX executable ../../../../bin/itkAlgorithmsPrintTest3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkAlgorithmsPrintTest3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/itkAlgorithmsPrintTest3.dir/itkAlgorithmsPrintTest3.cxx.o -o ../../../../bin/itkAlgorithmsPrintTest3 ../../../../lib/libITKBiasCorrection-4.12.so.1 ../../../../lib/libITKBioCell-4.12.so.1 ../../../../lib/libITKFEM-4.12.so.1 ../../../../lib/libITKFFT-4.12.so.1 ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOGE-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOSiemens-4.12.so.1 ../../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../../lib/libITKIOXML-4.12.so.1 ../../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKPolynomials-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKVTK-4.12.so.1 ../../../../lib/libITKWatersheds-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOIPL-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 60%] Built target itkAlgorithmsPrintTest3 make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBasePython.dir/build.make Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBasePython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 60%] Generating itkBoxImageFilterPython.cpp, ../../../lib/itkBoxImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkFixedArrayPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFixedArray.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Generating itkVectorPython.cpp, ../../../lib/itkVectorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_1.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_1.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_1.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_3.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_3.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_3.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_2.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_2.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_2.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/ITKQuadEdgeMeshFilteringTestDriver.cxx.o -c /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test/ITKQuadEdgeMeshFilteringTestDriver.cxx In file included from /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test/ITKQuadEdgeMeshFilteringTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkAutomaticTopologyQuadEdgeMeshSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkVectorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVector.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Generating itkCovariantVectorPython.cpp, ../../../lib/itkCovariantVectorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkStatisticsPrintTest.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkStatisticsPrintTest.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkStatisticsPrintTest.cxx:19: In file included from /<>/Modules/Numerics/Statistics/include/itkSampleClassifierFilter.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipSample.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkSubsample.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/itkCommonPrintTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkCovariantVectorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCovariantVector.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Generating itkPointPython.cpp, ../../../lib/itkPointPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_4.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_4.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_4.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_7.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_6.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_6.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_6.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_8.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_5.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_5.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_5.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_9.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkAutomaticTopologyQuadEdgeMeshSourceTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkAutomaticTopologyQuadEdgeMeshSourceTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkAutomaticTopologyQuadEdgeMeshSourceTest.cxx:22: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkBorderQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkPointPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPoint.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Generating itkTriangleHelperPython.cpp, ../../../lib/itkTriangleHelperPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_7.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_7.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_7.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkRecursiveMultiResolutionPyramidImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_8.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_8.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_8.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkNormalizedCorrelationImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_9.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_9.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_9.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanReciprocalSquareDifferenceImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkTriangleHelperPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTriangleHelper.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Generating itkVariableSizeMatrixPython.cpp, ../../../lib/itkVariableSizeMatrixPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkVariableSizeMatrixPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVariableSizeMatrix.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Generating itkVersorPython.cpp, ../../../lib/itkVersorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkRecursiveMultiResolutionPyramidImageFilterTest.cxx.o -c /<>/Modules/Registration/Common/test/itkRecursiveMultiResolutionPyramidImageFilterTest.cxx In file included from /<>/Modules/Registration/Common/test/itkRecursiveMultiResolutionPyramidImageFilterTest.cxx:18: In file included from /<>/Modules/Registration/Common/include/itkRecursiveMultiResolutionPyramidImageFilter.h:21: In file included from /<>/Modules/Registration/Common/include/itkMultiResolutionPyramidImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanSquaresImageMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkVersorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVersor.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Generating stdcomplexPython.cpp, ../../../lib/stdcomplexPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkNormalizedCorrelationImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkNormalizedCorrelationImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkNormalizedCorrelationImageMetricTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMutualInformationMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkBorderQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkBorderQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkBorderQuadEdgeMeshFilterTest.cxx:18: In file included from /<>/Modules/IO/Mesh/include/itkMeshFileReader.h:26: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkBorderQuadEdgeMeshFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanReciprocalSquareDifferenceImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkMeanReciprocalSquareDifferenceImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkMeanReciprocalSquareDifferenceImageMetricTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkBinaryMask3DQuadEdgeMeshSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkCommonPrintTest.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkCommonPrintTest.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkCommonPrintTest.cxx:20: In file included from /<>/Modules/Core/ImageAdaptors/include/itkAcosImageAdaptor.h:21: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkCommonPrintTest.cxx:39: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Nonunit/IntegratedTest/test/itkCommonPrintTest.cxx:231:8: note: in instantiation of template class 'itk::Euler3DTransform' requested here itk::Euler3DTransform::Pointer Euler3DTransformObj = ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkCommonPrintTest.cxx:72: In file included from /<>/Modules/Core/Transform/include/itkScaleSkewVersor3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Core/Transform/include/itkScaleSkewVersor3DTransform.h:55:10: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here public VersorRigid3DTransform ^ /<>/Modules/Nonunit/IntegratedTest/test/itkCommonPrintTest.cxx:509:8: note: in instantiation of template class 'itk::ScaleSkewVersor3DTransform' requested here itk::ScaleSkewVersor3DTransform::Pointer ScaleSkewVersor3DTransformObj = ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/itkIOPrintTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/stdcomplexPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/stdcomplex.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Generating vnl_c_vectorPython.cpp, ../../../lib/vnl_c_vectorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_c_vectorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_c_vector.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 60%] Generating vnl_cost_functionPython.cpp, ../../../lib/vnl_cost_functionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkIOPrintTest.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkIOPrintTest.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkIOPrintTest.cxx:19: In file included from /<>/Modules/IO/BioRad/include/itkBioRadImageIO.h:32: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/itkBasicFiltersPrintTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkBorderQuadEdgeMeshFilterTest2.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkBorderQuadEdgeMeshFilterTest2.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkBorderQuadEdgeMeshFilterTest2.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkCleanQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/itkBoxImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBoxImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Generating itkCastImageFilterPython.cpp, ../../../lib/itkCastImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanSquaresImageMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkMeanSquaresImageMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkMeanSquaresImageMetricTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkPointSetToPointSetRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_cost_functionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_cost_function.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Generating vnl_diag_matrixPython.cpp, ../../../lib/vnl_diag_matrixPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMutualInformationMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkMutualInformationMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkMutualInformationMetricTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkMutualInformationImageToImageMetric.h:21: In file included from /<>/Modules/Registration/Common/include/itkImageToImageMetric.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageToSpatialObjectRegistrationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkBinaryMask3DQuadEdgeMeshSourceTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkBinaryMask3DQuadEdgeMeshSourceTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkBinaryMask3DQuadEdgeMeshSourceTest.cxx:21: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDelaunayConformingQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_diag_matrixPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_diag_matrix.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Generating vnl_file_matrixPython.cpp, ../../../lib/vnl_file_matrixPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_file_matrixPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_file_matrix.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Generating vnl_file_vectorPython.cpp, ../../../lib/vnl_file_vectorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkPointSetToPointSetRegistrationTest.cxx.o -c /<>/Modules/Registration/Common/test/itkPointSetToPointSetRegistrationTest.cxx In file included from /<>/Modules/Registration/Common/test/itkPointSetToPointSetRegistrationTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkBlockMatchingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_file_vectorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_file_vector.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Generating vnl_fortran_copyPython.cpp, ../../../lib/vnl_fortran_copyPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_fortran_copyPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_fortran_copy.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Generating vnl_least_squares_functionPython.cpp, ../../../lib/vnl_least_squares_functionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageToSpatialObjectRegistrationTest.cxx.o -c /<>/Modules/Registration/Common/test/itkImageToSpatialObjectRegistrationTest.cxx In file included from /<>/Modules/Registration/Common/test/itkImageToSpatialObjectRegistrationTest.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkEllipseSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkLandmarkBasedTransformInitializerTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_least_squares_functionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_least_squares_function.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 61%] Generating vnl_matrix_fixedPython.cpp, ../../../lib/vnl_matrix_fixedPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkBlockMatchingImageFilterTest.cxx.o -c /<>/Modules/Registration/Common/test/itkBlockMatchingImageFilterTest.cxx In file included from /<>/Modules/Registration/Common/test/itkBlockMatchingImageFilterTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_17.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkCleanQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkCleanQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkCleanQuadEdgeMeshFilterTest.cxx:18: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDiscreteGaussianCurvatureQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_matrix_fixedPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_matrix_fixed.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Generating vnl_matrix_fixed_refPython.cpp, ../../../lib/vnl_matrix_fixed_refPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDelaunayConformingQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkDelaunayConformingQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkDelaunayConformingQuadEdgeMeshFilterTest.cxx:18: In file included from /<>/Modules/IO/Mesh/include/itkMeshFileReader.h:26: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDiscreteMaximumCurvatureQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_matrix_fixed_refPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_matrix_fixed_ref.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Generating vnl_matrix_refPython.cpp, ../../../lib/vnl_matrix_refPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_matrix_refPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_matrix_ref.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Generating vnl_vector_refPython.cpp, ../../../lib/vnl_vector_refPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkLandmarkBasedTransformInitializerTest.cxx.o -c /<>/Modules/Registration/Common/test/itkLandmarkBasedTransformInitializerTest.cxx In file included from /<>/Modules/Registration/Common/test/itkLandmarkBasedTransformInitializerTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkLandmarkBasedTransformInitializer.h:23: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Registration/Common/test/itkLandmarkBasedTransformInitializerTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkLandmarkBasedTransformInitializer.h:23: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/Common/test/itkLandmarkBasedTransformInitializerTest.cxx:150:3: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here TransformType::Pointer transform = TransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Registration/Common/test/itkLandmarkBasedTransformInitializerTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkLandmarkBasedTransformInitializer.h:23: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/Common/test/itkLandmarkBasedTransformInitializerTest.cxx:150:3: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here TransformType::Pointer transform = TransformType::New(); ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/Common/include/itkLandmarkBasedTransformInitializer.hxx:63:8: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here if ( dynamic_cast< VersorRigid3DTransformType * >( this->m_Transform.GetPointer() ) != ITK_NULLPTR ) ^ /<>/Modules/Registration/Common/include/itkLandmarkBasedTransformInitializer.hxx:705:9: note: in instantiation of function template specialization 'itk::LandmarkBasedTransformInitializer, itk::ImageBase<3>, itk::ImageBase<3> >::InternalInitializeTransform >' requested here this->InternalInitializeTransform(static_cast(ITK_NULLPTR)); ^ /<>/Modules/Registration/Common/include/itkLandmarkBasedTransformInitializer.h:178:3: note: in instantiation of member function 'itk::LandmarkBasedTransformInitializer, itk::ImageBase<3>, itk::ImageBase<3> >::InitializeTransform' requested here LandmarkBasedTransformInitializer(); ^ /<>/Modules/Registration/Common/include/itkLandmarkBasedTransformInitializer.h:99:15: note: in instantiation of member function 'itk::LandmarkBasedTransformInitializer, itk::ImageBase<3>, itk::ImageBase<3> >::LandmarkBasedTransformInitializer' requested here itkNewMacro(Self); ^ /<>/Modules/Registration/Common/test/itkLandmarkBasedTransformInitializerTest.cxx:758:77: note: in instantiation of member function 'itk::LandmarkBasedTransformInitializer, itk::ImageBase<3>, itk::ImageBase<3> >::New' requested here TransformInitializerType::Pointer initializer = TransformInitializerType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Registration/Common/test/itkLandmarkBasedTransformInitializerTest.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkLandmarkBasedTransformInitializer.h:23: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/Common/include/itkLandmarkBasedTransformInitializer.hxx:63:8: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here if ( dynamic_cast< VersorRigid3DTransformType * >( this->m_Transform.GetPointer() ) != ITK_NULLPTR ) ^ /<>/Modules/Registration/Common/include/itkLandmarkBasedTransformInitializer.hxx:705:9: note: in instantiation of function template specialization 'itk::LandmarkBasedTransformInitializer, itk::ImageBase<3>, itk::ImageBase<3> >::InternalInitializeTransform >' requested here this->InternalInitializeTransform(static_cast(ITK_NULLPTR)); ^ /<>/Modules/Registration/Common/include/itkLandmarkBasedTransformInitializer.h:178:3: note: in instantiation of member function 'itk::LandmarkBasedTransformInitializer, itk::ImageBase<3>, itk::ImageBase<3> >::InitializeTransform' requested here LandmarkBasedTransformInitializer(); ^ /<>/Modules/Registration/Common/include/itkLandmarkBasedTransformInitializer.h:99:15: note: in instantiation of member function 'itk::LandmarkBasedTransformInitializer, itk::ImageBase<3>, itk::ImageBase<3> >::LandmarkBasedTransformInitializer' requested here itkNewMacro(Self); ^ /<>/Modules/Registration/Common/test/itkLandmarkBasedTransformInitializerTest.cxx:758:77: note: in instantiation of member function 'itk::LandmarkBasedTransformInitializer, itk::ImageBase<3>, itk::ImageBase<3> >::New' requested here TransformInitializerType::Pointer initializer = TransformInitializerType::New(); ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 5 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Building CXX object Modules/Registration/Common/test/CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkEuclideanDistancePointMetricTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_vector_refPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_vector_ref.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Generating vnl_matrixPython.cpp, ../../../lib/vnl_matrixPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_17.cxx.o -c /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_17.cxx In file included from /<>/Modules/Registration/Common/test/itkImageRegistrationMethodTest_17.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Generating vnl_vectorPython.cpp, ../../../lib/vnl_vectorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDiscreteGaussianCurvatureQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkDiscreteGaussianCurvatureQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkDiscreteGaussianCurvatureQuadEdgeMeshFilterTest.cxx:18: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDiscreteMeanCurvatureQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_matrixPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_matrix.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Generating vnl_unary_functionPython.cpp, ../../../lib/vnl_unary_functionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_vectorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_vector.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Generating ITKCommonBasePython.cpp, ../../../lib/ITKCommonBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDiscreteMaximumCurvatureQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkDiscreteMaximumCurvatureQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkDiscreteMaximumCurvatureQuadEdgeMeshFilterTest.cxx:18: In file included from /<>/Modules/IO/Mesh/include/itkMeshFileReader.h:26: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDiscreteMinimumCurvatureQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_unary_functionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/vnl_unary_function.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Generating itkSizePython.cpp, ../../../lib/itkSizePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkEuclideanDistancePointMetricTest.cxx.o -c /<>/Modules/Registration/Common/test/itkEuclideanDistancePointMetricTest.cxx In file included from /<>/Modules/Registration/Common/test/itkEuclideanDistancePointMetricTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkIdentityTransform.h:22: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Linking CXX executable ../../../../bin/ITKRegistrationCommonTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/ITKCommonBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKCommonBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Generating itkOffsetPython.cpp, ../../../lib/itkOffsetPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkSizePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSize.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Generating itkArrayPython.cpp, ../../../lib/itkArrayPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkOffsetPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkOffset.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 62%] Generating itkIndexPython.cpp, ../../../lib/itkIndexPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/Common/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKRegistrationCommonTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKRegistrationCommonTestDriver.dir/ITKRegistrationCommonTestDriver.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkBSplineTransformParametersAdaptorTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkDisplacementFieldTransformParametersAdaptorTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkBSplineSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkGaussianSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkBSplineExponentialDiffeomorphicTransformParametersAdaptorTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkGaussianExponentialDiffeomorphicTransformParametersAdaptorTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkCenteredTransformInitializerTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkCenteredVersorTransformInitializerTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMultiResolutionImageRegistrationMethodTest_1.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMultiResolutionImageRegistrationMethodTest_2.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_10.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_11.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_12.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_13.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_14.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_15.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_16.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanSquaresPointSetToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkGradientDifferenceImageToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkHistogramImageToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMutualInformationHistogramImageToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanReciprocalSquareDifferencePointSetToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMultiResolutionImageRegistrationMethodTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkCompareHistogramImageToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanSquaresHistogramImageToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkCorrelationCoefficientHistogramImageToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkNormalizedCorrelationPointSetToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkKullbackLeiblerCompareHistogramImageToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkNormalizedMutualInformationHistogramImageToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkPointSetToSpatialObjectDemonsRegistrationTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkPointSetToImageRegistrationTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkPointsLocatorTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkKappaStatisticImageToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMattesMutualInformationImageToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMatchCardinalityImageToImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMultiResolutionPyramidImageFilterTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_1.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_2.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_3.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_4.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_5.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_6.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_7.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_8.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_9.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkRecursiveMultiResolutionPyramidImageFilterTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkNormalizedCorrelationImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanReciprocalSquareDifferenceImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMeanSquaresImageMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkMutualInformationMetricTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkPointSetToPointSetRegistrationTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageToSpatialObjectRegistrationTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkBlockMatchingImageFilterTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkLandmarkBasedTransformInitializerTest.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkImageRegistrationMethodTest_17.cxx.o CMakeFiles/ITKRegistrationCommonTestDriver.dir/itkEuclideanDistancePointMetricTest.cxx.o -o ../../../../bin/ITKRegistrationCommonTestDriver ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 62%] Built target ITKRegistrationCommonTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowPython.dir/build.make Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 62%] Generating itkCurvatureFlowImageFilterPython.cpp, ../../../lib/itkCurvatureFlowImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkArrayPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkArray.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkContinuousIndexPython.cpp, ../../../lib/itkContinuousIndexPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkIndexPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIndex.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkMatrixPython.cpp, ../../../lib/itkMatrixPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkBasicFiltersPrintTest.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkBasicFiltersPrintTest.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkBasicFiltersPrintTest.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/itkNeuralNetworksPrintTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkNeuralNetworksPrintTest.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkNeuralNetworksPrintTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/itkSpatialObjectPrintTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkContinuousIndexPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkContinuousIndex.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Modules/Nonunit/IntegratedTest/test/CMakeFiles/ITKIntegratedTestTestDriver.dir/itkShrinkImagePreserveObjectPhysicalLocations.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDiscreteMeanCurvatureQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkDiscreteMeanCurvatureQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkDiscreteMeanCurvatureQuadEdgeMeshFilterTest.cxx:18: In file included from /<>/Modules/IO/Mesh/include/itkMeshFileReader.h:26: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkNormalQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkMatrixPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMatrix.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkVectorContainerPython.cpp, ../../../lib/itkVectorContainerPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDiscreteMinimumCurvatureQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkDiscreteMinimumCurvatureQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkDiscreteMinimumCurvatureQuadEdgeMeshFilterTest.cxx:18: In file included from /<>/Modules/IO/Mesh/include/itkMeshFileReader.h:26: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkParameterizationQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkSpatialObjectPrintTest.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkSpatialObjectPrintTest.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkSpatialObjectPrintTest.cxx:19: In file included from /<>/Modules/Core/SpatialObjects/include/itkEllipseSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkQuadricDecimationQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkShrinkImagePreserveObjectPhysicalLocations.cxx.o -c /<>/Modules/Nonunit/IntegratedTest/test/itkShrinkImagePreserveObjectPhysicalLocations.cxx In file included from /<>/Modules/Nonunit/IntegratedTest/test/itkShrinkImagePreserveObjectPhysicalLocations.cxx:34: In file included from /<>/Modules/Filtering/ImageStatistics/include/itkImageMomentsCalculator.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Linking CXX executable ../../../../bin/ITKIntegratedTestTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/IntegratedTest/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIntegratedTestTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIntegratedTestTestDriver.dir/ITKIntegratedTestTestDriver.cxx.o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkFilterImageAddTest.cxx.o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkNumericsPrintTest.cxx.o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkReleaseDataFilterTest.cxx.o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkStatisticsPrintTest.cxx.o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkCommonPrintTest.cxx.o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkIOPrintTest.cxx.o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkBasicFiltersPrintTest.cxx.o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkNeuralNetworksPrintTest.cxx.o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkSpatialObjectPrintTest.cxx.o CMakeFiles/ITKIntegratedTestTestDriver.dir/itkShrinkImagePreserveObjectPhysicalLocations.cxx.o -o ../../../../bin/ITKIntegratedTestTestDriver ../../../../lib/libITKBiasCorrection-4.12.so.1 ../../../../lib/libITKBioCell-4.12.so.1 ../../../../lib/libITKFEM-4.12.so.1 ../../../../lib/libITKFFT-4.12.so.1 ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOGE-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOSiemens-4.12.so.1 ../../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../../lib/libITKIOXML-4.12.so.1 ../../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKPolynomials-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion ../../../../lib/libITKVTK-4.12.so.1 ../../../../lib/libITKWatersheds-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOIPL-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 63%] Built target ITKIntegratedTestTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/build.make Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkSamplePython.cpp, ../../../lib/itkSamplePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkSamplePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSample.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkHistogramPython.cpp, ../../../lib/itkHistogramPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkVectorContainerPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorContainer.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkMapContainerPython.cpp, ../../../lib/itkMapContainerPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHistogram.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkListSamplePython.cpp, ../../../lib/itkListSamplePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkMapContainerPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMapContainer.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkBoundingBoxPython.cpp, ../../../lib/itkBoundingBoxPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkNormalQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkNormalQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkNormalQuadEdgeMeshFilterTest.cxx:18: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkRegularSphereQuadEdgeMeshSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkParameterizationQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkParameterizationQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkParameterizationQuadEdgeMeshFilterTest.cxx:18: In file included from /<>/Modules/IO/Mesh/include/itkMeshFileReader.h:26: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkSmoothingQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkQuadricDecimationQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkQuadricDecimationQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkQuadricDecimationQuadEdgeMeshFilterTest.cxx:18: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkSquaredEdgeLengthDecimationQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkListSamplePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkListSample.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkMembershipFunctionBasePython.cpp, ../../../lib/itkMembershipFunctionBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkRegularSphereQuadEdgeMeshSourceTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkRegularSphereQuadEdgeMeshSourceTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkRegularSphereQuadEdgeMeshSourceTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkLaplacianDeformationQuadEdgeMeshFilterWithSoftConstraintsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkBoundingBoxPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBoundingBox.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkRGBPixelPython.cpp, ../../../lib/itkRGBPixelPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkRGBPixelPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRGBPixel.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkRGBAPixelPython.cpp, ../../../lib/itkRGBAPixelPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkRGBAPixelPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRGBAPixel.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkVariableLengthVectorPython.cpp, ../../../lib/itkVariableLengthVectorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkMembershipFunctionBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMembershipFunctionBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkDistanceMetricPython.cpp, ../../../lib/itkDistanceMetricPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkVariableLengthVectorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVariableLengthVector.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkImageRegionPython.cpp, ../../../lib/itkImageRegionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkSmoothingQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkSmoothingQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkSmoothingQuadEdgeMeshFilterTest.cxx:18: In file included from /<>/Modules/IO/Mesh/include/itkMeshFileReader.h:26: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Modules/Filtering/QuadEdgeMeshFiltering/test/CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkLaplacianDeformationQuadEdgeMeshFilterWithHardConstraintsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageRegionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageRegion.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkSymmetricSecondRankTensorPython.cpp, ../../../lib/itkSymmetricSecondRankTensorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkSquaredEdgeLengthDecimationQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkSquaredEdgeLengthDecimationQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkSquaredEdgeLengthDecimationQuadEdgeMeshFilterTest.cxx:18: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkImagePython.cpp, ../../../lib/itkImagePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkSymmetricSecondRankTensorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSymmetricSecondRankTensor.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkVectorImagePython.cpp, ../../../lib/itkVectorImagePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkLaplacianDeformationQuadEdgeMeshFilterWithSoftConstraintsTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkLaplacianDeformationQuadEdgeMeshFilterWithSoftConstraintsTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkLaplacianDeformationQuadEdgeMeshFilterWithSoftConstraintsTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkNeighborhoodPython.cpp, ../../../lib/itkNeighborhoodPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkDistanceMetricPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDistanceMetric.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkEuclideanDistanceMetricPython.cpp, ../../../lib/itkEuclideanDistanceMetricPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkNeighborhoodPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNeighborhood.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkImageSourceCommonPython.cpp, ../../../lib/itkImageSourceCommonPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageSourceCommonPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageSourceCommon.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkImageSourcePython.cpp, ../../../lib/itkImageSourcePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkLaplacianDeformationQuadEdgeMeshFilterWithHardConstraintsTest.cxx.o -c /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkLaplacianDeformationQuadEdgeMeshFilterWithHardConstraintsTest.cxx In file included from /<>/Modules/Filtering/QuadEdgeMeshFiltering/test/itkLaplacianDeformationQuadEdgeMeshFilterWithHardConstraintsTest.cxx:19: In file included from /<>/Modules/Core/QuadEdgeMesh/include/itkQuadEdgeMesh.h:29: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Linking CXX executable ../../../../bin/ITKQuadEdgeMeshFilteringTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/ITKQuadEdgeMeshFilteringTestDriver.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkAutomaticTopologyQuadEdgeMeshSourceTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkBorderQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkBorderQuadEdgeMeshFilterTest2.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkBinaryMask3DQuadEdgeMeshSourceTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkCleanQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDelaunayConformingQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDiscreteGaussianCurvatureQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDiscreteMaximumCurvatureQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDiscreteMeanCurvatureQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkDiscreteMinimumCurvatureQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkNormalQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkParameterizationQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkQuadricDecimationQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkRegularSphereQuadEdgeMeshSourceTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkSmoothingQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkSquaredEdgeLengthDecimationQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkLaplacianDeformationQuadEdgeMeshFilterWithSoftConstraintsTest.cxx.o CMakeFiles/ITKQuadEdgeMeshFilteringTestDriver.dir/itkLaplacianDeformationQuadEdgeMeshFilterWithHardConstraintsTest.cxx.o -o ../../../../bin/ITKQuadEdgeMeshFilteringTestDriver ../../../../lib/libITKIOMesh-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 63%] Built target ITKQuadEdgeMeshFilteringTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/build.make Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkCompositeTransformPython.cpp, ../../../lib/itkCompositeTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkImagePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImage.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkImageToImageFilterCommonPython.cpp, ../../../lib/itkImageToImageFilterCommonPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkVectorImagePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorImage.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkImageToImageFilterAPython.cpp, ../../../lib/itkImageToImageFilterAPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageToImageFilterCommonPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageToImageFilterCommon.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkImageToImageFilterBPython.cpp, ../../../lib/itkImageToImageFilterBPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkEuclideanDistanceMetricPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkEuclideanDistanceMetric.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkHistogramToEntropyImageFilterPython.cpp, ../../../lib/itkHistogramToEntropyImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkCompositeTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCompositeTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkTransformBasePython.cpp, ../../../lib/itkTransformBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageSourcePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageSource.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkInPlaceImageFilterAPython.cpp, ../../../lib/itkInPlaceImageFilterAPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkTransformBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTransformBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkMatrixOffsetTransformBasePython.cpp, ../../../lib/itkMatrixOffsetTransformBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramToEntropyImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHistogramToEntropyImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkHistogramToIntensityImageFilterPython.cpp, ../../../lib/itkHistogramToIntensityImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkMatrixOffsetTransformBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMatrixOffsetTransformBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkEuler2DTransformPython.cpp, ../../../lib/itkEuler2DTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkEuler2DTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkEuler2DTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkEuler3DTransformPython.cpp, ../../../lib/itkEuler3DTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramToIntensityImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHistogramToIntensityImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkHistogramToLogProbabilityImageFilterPython.cpp, ../../../lib/itkHistogramToLogProbabilityImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkEuler3DTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkEuler3DTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkMultiTransformPython.cpp, ../../../lib/itkMultiTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkMultiTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMultiTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkVersorTransformPython.cpp, ../../../lib/itkVersorTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageToImageFilterAPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageToImageFilterA.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkInPlaceImageFilterBPython.cpp, ../../../lib/itkInPlaceImageFilterBPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramToLogProbabilityImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHistogramToLogProbabilityImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkHistogramToProbabilityImageFilterPython.cpp, ../../../lib/itkHistogramToProbabilityImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkVersorTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVersorTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkVersorRigid3DTransformPython.cpp, ../../../lib/itkVersorRigid3DTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkVersorRigid3DTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVersorRigid3DTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkSimilarity2DTransformPython.cpp, ../../../lib/itkSimilarity2DTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramToProbabilityImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHistogramToProbabilityImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkHistogramToRunLengthFeaturesFilterPython.cpp, ../../../lib/itkHistogramToRunLengthFeaturesFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFiniteDifference/itkDenseFiniteDifferenceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDenseFiniteDifferenceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkFiniteDifferenceFunctionPython.cpp, ../../../lib/itkFiniteDifferenceFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkSimilarity2DTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSimilarity2DTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkSimilarity3DTransformPython.cpp, ../../../lib/itkSimilarity3DTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramToRunLengthFeaturesFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHistogramToRunLengthFeaturesFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkHistogramToTextureFeaturesFilterPython.cpp, ../../../lib/itkHistogramToTextureFeaturesFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFiniteDifference/itkFiniteDifferenceFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFiniteDifferenceFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkFiniteDifferenceImageFilterPython.cpp, ../../../lib/itkFiniteDifferenceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramToTextureFeaturesFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHistogramToTextureFeaturesFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkImageToHistogramFilterPython.cpp, ../../../lib/itkImageToHistogramFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkSimilarity3DTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSimilarity3DTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkAffineTransformPython.cpp, ../../../lib/itkAffineTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkAffineTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAffineTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkScalableAffineTransformPython.cpp, ../../../lib/itkScalableAffineTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkScalableAffineTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScalableAffineTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkScaleTransformPython.cpp, ../../../lib/itkScaleTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkScaleTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScaleTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkKernelTransformPython.cpp, ../../../lib/itkKernelTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/itkCastImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCastImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkNoiseImageFilterPython.cpp, ../../../lib/itkNoiseImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkKernelTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkKernelTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkAzimuthElevationToCartesianTransformPython.cpp, ../../../lib/itkAzimuthElevationToCartesianTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkImageToHistogramFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageToHistogramFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkKdTreePython.cpp, ../../../lib/itkKdTreePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkAzimuthElevationToCartesianTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAzimuthElevationToCartesianTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkBSplineBaseTransformPython.cpp, ../../../lib/itkBSplineBaseTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkKdTreePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkKdTree.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkMaskedImageToHistogramFilterPython.cpp, ../../../lib/itkMaskedImageToHistogramFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow/itkCurvatureFlowImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCurvatureFlowImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkMinMaxCurvatureFlowImageFilterPython.cpp, ../../../lib/itkMinMaxCurvatureFlowImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkBSplineBaseTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBSplineBaseTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkBSplineTransformPython.cpp, ../../../lib/itkBSplineTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/itkNoiseImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNoiseImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkRecursiveSeparableImageFilterPython.cpp, ../../../lib/itkRecursiveSeparableImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkBSplineTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBSplineTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkCenteredAffineTransformPython.cpp, ../../../lib/itkCenteredAffineTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkCenteredAffineTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCenteredAffineTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkCenteredEuler3DTransformPython.cpp, ../../../lib/itkCenteredEuler3DTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkCenteredEuler3DTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCenteredEuler3DTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkCenteredRigid2DTransformPython.cpp, ../../../lib/itkCenteredRigid2DTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageToImageFilterBPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageToImageFilterB.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkDefaultDynamicMeshTraitsPython.cpp, ../../../lib/itkDefaultDynamicMeshTraitsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkDefaultDynamicMeshTraitsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDefaultDynamicMeshTraits.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkDefaultStaticMeshTraitsPython.cpp, ../../../lib/itkDefaultStaticMeshTraitsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkDefaultStaticMeshTraitsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDefaultStaticMeshTraits.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkFunctionBasePython.cpp, ../../../lib/itkFunctionBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkCenteredRigid2DTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCenteredRigid2DTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkCenteredSimilarity2DTransformPython.cpp, ../../../lib/itkCenteredSimilarity2DTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkFunctionBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFunctionBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkArray2DPython.cpp, ../../../lib/itkArray2DPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkCenteredSimilarity2DTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCenteredSimilarity2DTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkElasticBodyReciprocalSplineKernelTransformPython.cpp, ../../../lib/itkElasticBodyReciprocalSplineKernelTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkArray2DPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkArray2D.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkBSplineInterpolationWeightFunctionPython.cpp, ../../../lib/itkBSplineInterpolationWeightFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkInPlaceImageFilterAPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkInPlaceImageFilterA.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkDiffusionTensor3DPython.cpp, ../../../lib/itkDiffusionTensor3DPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkMaskedImageToHistogramFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMaskedImageToHistogramFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkNormalVariateGeneratorPython.cpp, ../../../lib/itkNormalVariateGeneratorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkBSplineInterpolationWeightFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBSplineInterpolationWeightFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkExtractImageFilterPython.cpp, ../../../lib/itkExtractImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkElasticBodyReciprocalSplineKernelTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkElasticBodyReciprocalSplineKernelTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkElasticBodySplineKernelTransformPython.cpp, ../../../lib/itkElasticBodySplineKernelTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkDiffusionTensor3DPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDiffusionTensor3D.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkImageBoundaryConditionPython.cpp, ../../../lib/itkImageBoundaryConditionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkNormalVariateGeneratorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNormalVariateGenerator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkScalarImageToCooccurrenceMatrixFilterPython.cpp, ../../../lib/itkScalarImageToCooccurrenceMatrixFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkElasticBodySplineKernelTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkElasticBodySplineKernelTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkFixedCenterOfRotationAffineTransformPython.cpp, ../../../lib/itkFixedCenterOfRotationAffineTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkScalarImageToCooccurrenceMatrixFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScalarImageToCooccurrenceMatrixFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkScalarImageToHistogramGeneratorPython.cpp, ../../../lib/itkScalarImageToHistogramGeneratorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkFixedCenterOfRotationAffineTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFixedCenterOfRotationAffineTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkIdentityTransformPython.cpp, ../../../lib/itkIdentityTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkIdentityTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIdentityTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkQuaternionRigidTransformPython.cpp, ../../../lib/itkQuaternionRigidTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkScalarImageToHistogramGeneratorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScalarImageToHistogramGenerator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkScalarImageToRunLengthFeaturesFilterPython.cpp, ../../../lib/itkScalarImageToRunLengthFeaturesFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkInPlaceImageFilterBPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkInPlaceImageFilterB.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkImageDuplicatorPython.cpp, ../../../lib/itkImageDuplicatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageBoundaryConditionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageBoundaryCondition.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkImageTransformerPython.cpp, ../../../lib/itkImageTransformerPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkQuaternionRigidTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkQuaternionRigidTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkRigid2DTransformPython.cpp, ../../../lib/itkRigid2DTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageDuplicatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageDuplicator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkImportImageFilterPython.cpp, ../../../lib/itkImportImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkScalarImageToRunLengthFeaturesFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScalarImageToRunLengthFeaturesFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkScalarImageToRunLengthMatrixFilterPython.cpp, ../../../lib/itkScalarImageToRunLengthMatrixFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkRigid2DTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRigid2DTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkRigid3DPerspectiveTransformPython.cpp, ../../../lib/itkRigid3DPerspectiveTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageTransformerPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageTransformer.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkKernelFunctionBasePython.cpp, ../../../lib/itkKernelFunctionBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkRigid3DPerspectiveTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRigid3DPerspectiveTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkRigid3DTransformPython.cpp, ../../../lib/itkRigid3DTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkScalarImageToRunLengthMatrixFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScalarImageToRunLengthMatrixFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkScalarImageToTextureFeaturesFilterPython.cpp, ../../../lib/itkScalarImageToTextureFeaturesFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkRigid3DTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRigid3DTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkScaleLogarithmicTransformPython.cpp, ../../../lib/itkScaleLogarithmicTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkKernelFunctionBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkKernelFunctionBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkMetaDataObjectPython.cpp, ../../../lib/itkMetaDataObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkImportImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImportImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkMinimumMaximumImageCalculatorPython.cpp, ../../../lib/itkMinimumMaximumImageCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkMetaDataObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMetaDataObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkNumericTraitsPython.cpp, ../../../lib/itkNumericTraitsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkScaleLogarithmicTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScaleLogarithmicTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkScaleSkewVersor3DTransformPython.cpp, ../../../lib/itkScaleSkewVersor3DTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkMinimumMaximumImageCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMinimumMaximumImageCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkOptimizerParametersPython.cpp, ../../../lib/itkOptimizerParametersPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkNumericTraitsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNumericTraits.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/itkScalarImageToTextureFeaturesFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScalarImageToTextureFeaturesFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkPointSetPython.cpp, ../../../lib/itkPointSetPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating ITKStatisticsPython.cpp, ../../../lib/ITKStatisticsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKStatistics/ITKStatisticsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKStatistics.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Statistics/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKStatistics /<>/BUILD/Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKStatisticsPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/build.make Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/ITKStatisticsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/ITKStatisticsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/ITKStatisticsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkSamplePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkOptimizerParametersPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkOptimizerParameters.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkSimpleDataObjectDecoratorPython.cpp, ../../../lib/itkSimpleDataObjectDecoratorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkScaleSkewVersor3DTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScaleSkewVersor3DTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkScaleVersor3DTransformPython.cpp, ../../../lib/itkScaleVersor3DTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkSamplePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkSamplePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkHistogramPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkSimpleDataObjectDecoratorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSimpleDataObjectDecorator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkListSamplePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFiniteDifference/itkFiniteDifferenceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFiniteDifferenceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating ITKFiniteDifferencePython.cpp, ../../../lib/ITKFiniteDifferencePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFiniteDifference/ITKFiniteDifferencePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKFiniteDifference.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/FiniteDifference/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKFiniteDifference /<>/BUILD/Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferencePython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFiniteDifferencePython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferencePython.dir/build.make Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferencePython.dir/build make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferencePython.dir/ITKFiniteDifferencePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFiniteDifference && /usr/bin/c++ -DITKFiniteDifferencePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/FiniteDifference/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFiniteDifferencePython.dir/ITKFiniteDifferencePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFiniteDifference/ITKFiniteDifferencePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferencePython.dir/itkDenseFiniteDifferenceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkListSamplePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkListSamplePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkMembershipFunctionBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkHistogramPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkDistanceMetricPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkPointSetPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPointSet.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Generating itkSpatialFunctionPython.cpp, ../../../lib/itkSpatialFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkMembershipFunctionBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkMembershipFunctionBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 63%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkEuclideanDistanceMetricPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkScaleVersor3DTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScaleVersor3DTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkThinPlateR2LogRSplineKernelTransformPython.cpp, ../../../lib/itkThinPlateR2LogRSplineKernelTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkDistanceMetricPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkDistanceMetricPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkHistogramToEntropyImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkEuclideanDistanceMetricPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkEuclideanDistanceMetricPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkHistogramToIntensityImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFiniteDifference && /usr/bin/c++ -DITKFiniteDifferencePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/FiniteDifference/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFiniteDifferencePython.dir/itkDenseFiniteDifferenceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFiniteDifference/itkDenseFiniteDifferenceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferencePython.dir/itkFiniteDifferenceFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkSpatialFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSpatialFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkSpatialOrientationPython.cpp, ../../../lib/itkSpatialOrientationPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkHistogramToEntropyImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramToEntropyImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkHistogramToLogProbabilityImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkHistogramToIntensityImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramToIntensityImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkStreamingImageFilterPython.cpp, ../../../lib/itkStreamingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkSpatialOrientationPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSpatialOrientation.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkHistogramToProbabilityImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkThinPlateR2LogRSplineKernelTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkThinPlateR2LogRSplineKernelTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkThinPlateSplineKernelTransformPython.cpp, ../../../lib/itkThinPlateSplineKernelTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFiniteDifference && /usr/bin/c++ -DITKFiniteDifferencePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/FiniteDifference/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFiniteDifferencePython.dir/itkFiniteDifferenceFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFiniteDifference/itkFiniteDifferenceFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKFiniteDifference/CMakeFiles/ITKFiniteDifferencePython.dir/itkFiniteDifferenceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkHistogramToProbabilityImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramToProbabilityImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkHistogramToRunLengthFeaturesFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkHistogramToLogProbabilityImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramToLogProbabilityImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkHistogramToTextureFeaturesFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkHistogramToRunLengthFeaturesFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramToRunLengthFeaturesFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkImageToHistogramFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkHistogramToTextureFeaturesFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkHistogramToTextureFeaturesFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkKdTreePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkThinPlateSplineKernelTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkThinPlateSplineKernelTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkTranslationTransformPython.cpp, ../../../lib/itkTranslationTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkKdTreePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkKdTreePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkMaskedImageToHistogramFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkTranslationTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTranslationTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkVolumeSplineKernelTransformPython.cpp, ../../../lib/itkVolumeSplineKernelTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFiniteDifference && /usr/bin/c++ -DITKFiniteDifferencePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/FiniteDifference/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFiniteDifferencePython.dir/itkFiniteDifferenceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFiniteDifference/itkFiniteDifferenceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Linking CXX shared module ../../../lib/_ITKFiniteDifferencePython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFiniteDifference && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFiniteDifferencePython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKFiniteDifferencePython.so CMakeFiles/ITKFiniteDifferencePython.dir/ITKFiniteDifferencePython.cpp.o CMakeFiles/ITKFiniteDifferencePython.dir/itkDenseFiniteDifferenceImageFilterPython.cpp.o CMakeFiles/ITKFiniteDifferencePython.dir/itkFiniteDifferenceFunctionPython.cpp.o CMakeFiles/ITKFiniteDifferencePython.dir/itkFiniteDifferenceImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 64%] Built target ITKFiniteDifferencePython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/build.make Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkImageFunctionBasePython.cpp, ../../../lib/itkImageFunctionBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/itkRecursiveSeparableImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRecursiveSeparableImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkVectorCastImageFilterPython.cpp, ../../../lib/itkVectorCastImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/itkVolumeSplineKernelTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVolumeSplineKernelTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating ITKTransformPython.cpp, ../../../lib/ITKTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTransform/ITKTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Transform/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKTransform /<>/BUILD/Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTransformPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/build.make Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/ITKTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/ITKTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/ITKTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkCompositeTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkStreamingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStreamingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridSwig.dir/build.make Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageGrid/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageGrid /<>/BUILD/Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageGridSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridSwig.dir/build.make Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 64%] Generating ../../Typedefs/itkPadImageFilterBase.i, ../../Typedefs/itkPadImageFilter.i, ../../Typedefs/itkBSplineDownsampleImageFilter.i, ../../Typedefs/itkBSplineUpsampleImageFilter.i, ../../Typedefs/itkBinShrinkImageFilter.i, ../../Typedefs/itkChangeInformationImageFilter.i, ../../Typedefs/itkConstantPadImageFilter.i, ../../Typedefs/itkCropImageFilter.i, ../../Typedefs/itkCyclicShiftImageFilter.i, ../../Typedefs/itkExpandImageFilter.i, ../../Typedefs/itkFlipImageFilter.i, ../../Typedefs/itkInterpolateImageFilter.i, ../../Typedefs/itkMirrorPadImageFilter.i, ../../Typedefs/itkOrientImageFilter.i, ../../Typedefs/itkPasteImageFilter.i, ../../Typedefs/itkPermuteAxesImageFilter.i, ../../Typedefs/itkRegionOfInterestImageFilter.i, ../../Typedefs/itkResampleImageFilter.i, ../../Typedefs/itkShrinkImageFilter.i, ../../Typedefs/itkSliceBySliceImageFilter.i, ../../Typedefs/itkTileImageFilter.i, ../../Typedefs/itkVectorResampleImageFilter.i, ../../Typedefs/itkWarpImageFilter.i, ../../Typedefs/itkWrapPadImageFilter.i, ../../Typedefs/itkZeroFluxNeumannPadImageFilter.i, ../../Typedefs/itkPadImageFilterBaseSwigInterface.h, ../../Typedefs/itkPadImageFilterSwigInterface.h, ../../Typedefs/itkBSplineDownsampleImageFilterSwigInterface.h, ../../Typedefs/itkBSplineUpsampleImageFilterSwigInterface.h, ../../Typedefs/itkBinShrinkImageFilterSwigInterface.h, ../../Typedefs/itkChangeInformationImageFilterSwigInterface.h, ../../Typedefs/itkConstantPadImageFilterSwigInterface.h, ../../Typedefs/itkCropImageFilterSwigInterface.h, ../../Typedefs/itkCyclicShiftImageFilterSwigInterface.h, ../../Typedefs/itkExpandImageFilterSwigInterface.h, ../../Typedefs/itkFlipImageFilterSwigInterface.h, ../../Typedefs/itkInterpolateImageFilterSwigInterface.h, ../../Typedefs/itkMirrorPadImageFilterSwigInterface.h, ../../Typedefs/itkOrientImageFilterSwigInterface.h, ../../Typedefs/itkPasteImageFilterSwigInterface.h, ../../Typedefs/itkPermuteAxesImageFilterSwigInterface.h, ../../Typedefs/itkRegionOfInterestImageFilterSwigInterface.h, ../../Typedefs/itkResampleImageFilterSwigInterface.h, ../../Typedefs/itkShrinkImageFilterSwigInterface.h, ../../Typedefs/itkSliceBySliceImageFilterSwigInterface.h, ../../Typedefs/itkTileImageFilterSwigInterface.h, ../../Typedefs/itkVectorResampleImageFilterSwigInterface.h, ../../Typedefs/itkWarpImageFilterSwigInterface.h, ../../Typedefs/itkWrapPadImageFilterSwigInterface.h, ../../Typedefs/itkZeroFluxNeumannPadImageFilterSwigInterface.h, ../../Typedefs/itkPadImageFilterBase.idx, ../../Typedefs/itkPadImageFilter.idx, ../../Typedefs/itkBSplineDownsampleImageFilter.idx, ../../Typedefs/itkBSplineUpsampleImageFilter.idx, ../../Typedefs/itkBinShrinkImageFilter.idx, ../../Typedefs/itkChangeInformationImageFilter.idx, ../../Typedefs/itkConstantPadImageFilter.idx, ../../Typedefs/itkCropImageFilter.idx, ../../Typedefs/itkCyclicShiftImageFilter.idx, ../../Typedefs/itkExpandImageFilter.idx, ../../Typedefs/itkFlipImageFilter.idx, ../../Typedefs/itkInterpolateImageFilter.idx, ../../Typedefs/itkMirrorPadImageFilter.idx, ../../Typedefs/itkOrientImageFilter.idx, ../../Typedefs/itkPasteImageFilter.idx, ../../Typedefs/itkPermuteAxesImageFilter.idx, ../../Typedefs/itkRegionOfInterestImageFilter.idx, ../../Typedefs/itkResampleImageFilter.idx, ../../Typedefs/itkShrinkImageFilter.idx, ../../Typedefs/itkSliceBySliceImageFilter.idx, ../../Typedefs/itkTileImageFilter.idx, ../../Typedefs/itkVectorResampleImageFilter.idx, ../../Typedefs/itkWarpImageFilter.idx, ../../Typedefs/itkWrapPadImageFilter.idx, ../../Typedefs/itkZeroFluxNeumannPadImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkImageFunctionBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageFunctionBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkBSplineDecompositionImageFilterPython.cpp, ../../../lib/itkBSplineDecompositionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkCompositeTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkCompositeTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkTransformBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow/itkMinMaxCurvatureFlowImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMinMaxCurvatureFlowImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkBinaryMinMaxCurvatureFlowImageFilterPython.cpp, ../../../lib/itkBinaryMinMaxCurvatureFlowImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkTransformBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkTransformBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkMatrixOffsetTransformBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkBSplineDecompositionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBSplineDecompositionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkBSplineInterpolateImageFunctionPython.cpp, ../../../lib/itkBSplineInterpolateImageFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkMatrixOffsetTransformBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkMatrixOffsetTransformBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkEuler2DTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkEuler2DTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkEuler2DTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkEuler3DTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkEuler3DTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkEuler3DTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkMultiTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkMultiTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkMultiTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkVersorTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFunction.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkPadImageFilterBase;itkPadImageFilter;itkBSplineDownsampleImageFilter;itkBSplineUpsampleImageFilter;itkBinShrinkImageFilter;itkChangeInformationImageFilter;itkConstantPadImageFilter;itkCropImageFilter;itkCyclicShiftImageFilter;itkExpandImageFilter;itkFlipImageFilter;itkInterpolateImageFilter;itkMirrorPadImageFilter;itkOrientImageFilter;itkPasteImageFilter;itkPermuteAxesImageFilter;itkRegionOfInterestImageFilter;itkResampleImageFilter;itkShrinkImageFilter;itkSliceBySliceImageFilter;itkTileImageFilter;itkVectorResampleImageFilter;itkWarpImageFilter;itkWrapPadImageFilter;itkZeroFluxNeumannPadImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 64%] Built target ITKImageGridSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBasePython.dir/build.make Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBasePython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 64%] Generating ITKIOImageBaseBasePython.cpp, ../../../lib/ITKIOImageBaseBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkVersorTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkVersorTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkVersorRigid3DTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOImageBase/ITKIOImageBaseBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOImageBaseBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkImageFileReaderPython.cpp, ../../../lib/itkImageFileReaderPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkBSplineInterpolateImageFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBSplineInterpolateImageFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkBSplineResampleImageFunctionPython.cpp, ../../../lib/itkBSplineResampleImageFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkVersorRigid3DTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkVersorRigid3DTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkSimilarity2DTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkSimilarity2DTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkSimilarity2DTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkSimilarity3DTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkSimilarity3DTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkSimilarity3DTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkAffineTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkAffineTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkAffineTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkScalableAffineTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkBSplineResampleImageFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBSplineResampleImageFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkInterpolateImageFunctionPython.cpp, ../../../lib/itkInterpolateImageFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkImageToHistogramFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkImageToHistogramFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkNormalVariateGeneratorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkScalableAffineTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkScalableAffineTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkScaleTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkNormalVariateGeneratorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkNormalVariateGeneratorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToCooccurrenceMatrixFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkScaleTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkScaleTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkKernelTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOImageBase/itkImageFileReaderPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageFileReader.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkImageFileWriterPython.cpp, ../../../lib/itkImageFileWriterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkInterpolateImageFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkInterpolateImageFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkLinearInterpolateImageFunctionPython.cpp, ../../../lib/itkLinearInterpolateImageFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkKernelTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkKernelTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkAzimuthElevationToCartesianTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkAzimuthElevationToCartesianTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkAzimuthElevationToCartesianTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkBSplineBaseTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToCooccurrenceMatrixFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkScalarImageToCooccurrenceMatrixFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToHistogramGeneratorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkBSplineBaseTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkBSplineBaseTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkBSplineTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkLinearInterpolateImageFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLinearInterpolateImageFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkNearestNeighborInterpolateImageFunctionPython.cpp, ../../../lib/itkNearestNeighborInterpolateImageFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkBSplineTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkBSplineTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkCenteredAffineTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOImageBase/itkImageFileWriterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageFileWriter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkImageSeriesReaderPython.cpp, ../../../lib/itkImageSeriesReaderPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkCenteredAffineTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkCenteredAffineTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkCenteredEuler3DTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkCenteredEuler3DTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkCenteredEuler3DTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkCenteredRigid2DTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToHistogramGeneratorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkScalarImageToHistogramGeneratorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToRunLengthFeaturesFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkCenteredRigid2DTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkCenteredRigid2DTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkCenteredSimilarity2DTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkNearestNeighborInterpolateImageFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNearestNeighborInterpolateImageFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkRayCastInterpolateImageFunctionPython.cpp, ../../../lib/itkRayCastInterpolateImageFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkCenteredSimilarity2DTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkCenteredSimilarity2DTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkElasticBodyReciprocalSplineKernelTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkElasticBodyReciprocalSplineKernelTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkElasticBodyReciprocalSplineKernelTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkElasticBodySplineKernelTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkElasticBodySplineKernelTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkElasticBodySplineKernelTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkFixedCenterOfRotationAffineTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkFixedCenterOfRotationAffineTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkFixedCenterOfRotationAffineTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkIdentityTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkRayCastInterpolateImageFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRayCastInterpolateImageFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating ITKImageFunctionPython.cpp, ../../../lib/ITKImageFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOImageBase/itkImageSeriesReaderPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageSeriesReader.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFunction/ITKImageFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkImageSeriesWriterPython.cpp, ../../../lib/itkImageSeriesWriterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/ImageFunction/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageFunction /<>/BUILD/Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFunctionPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/build.make Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/ITKImageFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkIdentityTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkIdentityTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkQuaternionRigidTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/c++ -DITKImageFunctionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/ImageFunction/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFunctionPython.dir/ITKImageFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFunction/ITKImageFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/itkImageFunctionBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToRunLengthFeaturesFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkScalarImageToRunLengthFeaturesFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToRunLengthMatrixFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkQuaternionRigidTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkQuaternionRigidTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkRigid2DTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkRigid2DTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkRigid2DTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkRigid3DPerspectiveTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkRigid3DPerspectiveTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkRigid3DPerspectiveTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkRigid3DTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkMaskedImageToHistogramFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkMaskedImageToHistogramFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKStatistics/CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToTextureFeaturesFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkRigid3DTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkRigid3DTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkScaleLogarithmicTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkScaleLogarithmicTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkScaleLogarithmicTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkScaleSkewVersor3DTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkScaleSkewVersor3DTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkScaleSkewVersor3DTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkScaleVersor3DTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToRunLengthMatrixFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkScalarImageToRunLengthMatrixFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkThinPlateR2LogRSplineKernelTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkScaleVersor3DTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkScaleVersor3DTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkThinPlateSplineKernelTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOImageBase/itkImageSeriesWriterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageSeriesWriter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Generating ITKIOImageBasePython.cpp, ../../../lib/ITKIOImageBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOImageBase/ITKIOImageBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/c++ -DITKImageFunctionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/ImageFunction/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFunctionPython.dir/itkImageFunctionBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkImageFunctionBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/itkBSplineDecompositionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/ImageBase/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOImageBase /<>/BUILD/Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBasePython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOImageBasePython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBasePython.dir/build.make Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBasePython.dir/build make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBasePython.dir/ITKIOImageBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/c++ -DITKIOImageBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/ImageBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOImageBasePython.dir/ITKIOImageBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOImageBase/ITKIOImageBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBasePython.dir/ITKIOImageBaseBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkThinPlateR2LogRSplineKernelTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkThinPlateR2LogRSplineKernelTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkTranslationTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkThinPlateSplineKernelTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkThinPlateSplineKernelTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKTransform/CMakeFiles/ITKTransformPython.dir/itkVolumeSplineKernelTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/c++ -DITKIOImageBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/ImageBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOImageBasePython.dir/ITKIOImageBaseBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOImageBase/ITKIOImageBaseBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBasePython.dir/itkImageFileReaderPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkTranslationTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkTranslationTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Building CXX object Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBasePython.dir/itkImageFileWriterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/c++ -DITKTransformPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Transform/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTransformPython.dir/itkVolumeSplineKernelTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTransform/itkVolumeSplineKernelTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Linking CXX shared module ../../../lib/_ITKTransformPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/c++ -DITKStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Statistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToTextureFeaturesFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKStatistics/itkScalarImageToTextureFeaturesFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 64%] Linking CXX shared module ../../../lib/_ITKStatisticsPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTransform && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKTransformPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKTransformPython.so CMakeFiles/ITKTransformPython.dir/ITKTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkCompositeTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkTransformBasePython.cpp.o CMakeFiles/ITKTransformPython.dir/itkMatrixOffsetTransformBasePython.cpp.o CMakeFiles/ITKTransformPython.dir/itkEuler2DTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkEuler3DTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkMultiTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkVersorTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkVersorRigid3DTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkSimilarity2DTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkSimilarity3DTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkAffineTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkScalableAffineTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkScaleTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkKernelTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkAzimuthElevationToCartesianTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkBSplineBaseTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkBSplineTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkCenteredAffineTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkCenteredEuler3DTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkCenteredRigid2DTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkCenteredSimilarity2DTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkElasticBodyReciprocalSplineKernelTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkElasticBodySplineKernelTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkFixedCenterOfRotationAffineTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkIdentityTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkQuaternionRigidTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkRigid2DTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkRigid3DPerspectiveTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkRigid3DTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkScaleLogarithmicTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkScaleSkewVersor3DTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkScaleVersor3DTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkThinPlateR2LogRSplineKernelTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkThinPlateSplineKernelTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkTranslationTransformPython.cpp.o CMakeFiles/ITKTransformPython.dir/itkVolumeSplineKernelTransformPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 64%] Built target ITKTransformPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPPython.dir/build.make Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 64%] Generating itkBMPImageIOPython.cpp, ../../../lib/itkBMPImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKStatistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKStatisticsPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKStatisticsPython.so CMakeFiles/ITKStatisticsPython.dir/ITKStatisticsPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkSamplePython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkHistogramPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkListSamplePython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkMembershipFunctionBasePython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkDistanceMetricPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkEuclideanDistanceMetricPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkHistogramToEntropyImageFilterPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkHistogramToIntensityImageFilterPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkHistogramToLogProbabilityImageFilterPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkHistogramToProbabilityImageFilterPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkHistogramToRunLengthFeaturesFilterPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkHistogramToTextureFeaturesFilterPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkImageToHistogramFilterPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkKdTreePython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkMaskedImageToHistogramFilterPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkNormalVariateGeneratorPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToCooccurrenceMatrixFilterPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToHistogramGeneratorPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToRunLengthFeaturesFilterPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToRunLengthMatrixFilterPython.cpp.o CMakeFiles/ITKStatisticsPython.dir/itkScalarImageToTextureFeaturesFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 65%] Built target ITKStatisticsPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMPython.dir/build.make Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 65%] Generating itkGDCMImageIOPython.cpp, ../../../lib/itkGDCMImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOBMP/itkBMPImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBMPImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 65%] Generating ITKIOBMPPython.cpp, ../../../lib/ITKIOBMPPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOBMP/ITKIOBMPPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOBMP.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BMP/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOBMP /<>/BUILD/Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBMPPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPPython.dir/build.make Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 65%] Building CXX object Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPPython.dir/ITKIOBMPPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOGDCM/itkGDCMImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGDCMImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 65%] Generating ITKIOGDCMPython.cpp, ../../../lib/ITKIOGDCMPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOBMP && /usr/bin/c++ -DITKIOBMPPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/BMP/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOBMPPython.dir/ITKIOBMPPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOBMP/ITKIOBMPPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 65%] Building CXX object Wrapping/Modules/ITKIOBMP/CMakeFiles/ITKIOBMPPython.dir/itkBMPImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOGDCM/ITKIOGDCMPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOGDCM.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GDCM/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOGDCM /<>/BUILD/Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGDCMPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMPython.dir/build.make Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 65%] Building CXX object Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMPython.dir/ITKIOGDCMPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGDCM && /usr/bin/c++ -DITKIOGDCMPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/GDCM/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOGDCMPython.dir/ITKIOGDCMPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOGDCM/ITKIOGDCMPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 65%] Building CXX object Wrapping/Modules/ITKIOGDCM/CMakeFiles/ITKIOGDCMPython.dir/itkGDCMImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOBMP && /usr/bin/c++ -DITKIOBMPPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/BMP/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOBMPPython.dir/itkBMPImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOBMP/itkBMPImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 65%] Linking CXX shared module ../../../lib/_ITKIOBMPPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOBMP && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOBMPPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOBMPPython.so CMakeFiles/ITKIOBMPPython.dir/ITKIOBMPPython.cpp.o CMakeFiles/ITKIOBMPPython.dir/itkBMPImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 66%] Built target ITKIOBMPPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLPython.dir/build.make Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 66%] Generating itkGiplImageIOPython.cpp, ../../../lib/itkGiplImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/c++ -DITKImageFunctionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/ImageFunction/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFunctionPython.dir/itkBSplineDecompositionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkBSplineDecompositionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 66%] Building CXX object Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/itkBSplineInterpolateImageFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGDCM && /usr/bin/c++ -DITKIOGDCMPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/GDCM/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOGDCMPython.dir/itkGDCMImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOGDCM/itkGDCMImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 66%] Linking CXX shared module ../../../lib/_ITKIOGDCMPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGDCM && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOGDCMPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOGDCMPython.so CMakeFiles/ITKIOGDCMPython.dir/ITKIOGDCMPython.cpp.o CMakeFiles/ITKIOGDCMPython.dir/itkGDCMImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 66%] Built target ITKIOGDCMPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGPython.dir/build.make Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 66%] Generating itkJPEGImageIOPython.cpp, ../../../lib/itkJPEGImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOGIPL/itkGiplImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGiplImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 66%] Generating ITKIOGIPLPython.cpp, ../../../lib/ITKIOGIPLPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOGIPL/ITKIOGIPLPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOGIPL.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GIPL/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOGIPL /<>/BUILD/Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGIPLPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLPython.dir/build.make Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 66%] Building CXX object Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLPython.dir/ITKIOGIPLPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGIPL && /usr/bin/c++ -DITKIOGIPLPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/GIPL/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOGIPLPython.dir/ITKIOGIPLPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOGIPL/ITKIOGIPLPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 66%] Building CXX object Wrapping/Modules/ITKIOGIPL/CMakeFiles/ITKIOGIPLPython.dir/itkGiplImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOJPEG/itkJPEGImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkJPEGImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 66%] Generating ITKIOJPEGPython.cpp, ../../../lib/ITKIOJPEGPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOJPEG/ITKIOJPEGPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOJPEG.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/JPEG/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOJPEG /<>/BUILD/Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOJPEGPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGPython.dir/build.make Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 66%] Building CXX object Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGPython.dir/ITKIOJPEGPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOJPEG && /usr/bin/c++ -DITKIOJPEGPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/JPEG/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOJPEGPython.dir/ITKIOJPEGPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOJPEG/ITKIOJPEGPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 66%] Building CXX object Wrapping/Modules/ITKIOJPEG/CMakeFiles/ITKIOJPEGPython.dir/itkJPEGImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGIPL && /usr/bin/c++ -DITKIOGIPLPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/GIPL/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOGIPLPython.dir/itkGiplImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOGIPL/itkGiplImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 66%] Linking CXX shared module ../../../lib/_ITKIOGIPLPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGIPL && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOGIPLPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOGIPLPython.so CMakeFiles/ITKIOGIPLPython.dir/ITKIOGIPLPython.cpp.o CMakeFiles/ITKIOGIPLPython.dir/itkGiplImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 66%] Built target ITKIOGIPLPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaPython.dir/build.make Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 66%] Generating itkMetaImageIOPython.cpp, ../../../lib/itkMetaImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOJPEG && /usr/bin/c++ -DITKIOJPEGPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/JPEG/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOJPEGPython.dir/itkJPEGImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOJPEG/itkJPEGImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 66%] Linking CXX shared module ../../../lib/_ITKIOJPEGPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOJPEG && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOJPEGPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOJPEGPython.so CMakeFiles/ITKIOJPEGPython.dir/ITKIOJPEGPython.cpp.o CMakeFiles/ITKIOJPEGPython.dir/itkJPEGImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 66%] Built target ITKIOJPEGPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTIPython.dir/build.make Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTIPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkNiftiImageIOPython.cpp, ../../../lib/itkNiftiImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOMeta/itkMetaImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMetaImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating ITKIOMetaPython.cpp, ../../../lib/ITKIOMetaPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOMeta/ITKIOMetaPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOMeta.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Meta/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOMeta /<>/BUILD/Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMetaPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaPython.dir/build.make Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaPython.dir/ITKIOMetaPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOMeta && /usr/bin/c++ -DITKIOMetaPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/Meta/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOMetaPython.dir/ITKIOMetaPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOMeta/ITKIOMetaPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIOMeta/CMakeFiles/ITKIOMetaPython.dir/itkMetaImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIONIFTI/itkNiftiImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNiftiImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating ITKIONIFTIPython.cpp, ../../../lib/ITKIONIFTIPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIONIFTI/ITKIONIFTIPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIONIFTI.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NIFTI/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIONIFTI /<>/BUILD/Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTIPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONIFTIPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTIPython.dir/build.make Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTIPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTIPython.dir/ITKIONIFTIPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOMeta && /usr/bin/c++ -DITKIOMetaPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/Meta/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOMetaPython.dir/itkMetaImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOMeta/itkMetaImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Linking CXX shared module ../../../lib/_ITKIOMetaPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIONIFTI && /usr/bin/c++ -DITKIONIFTIPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/NIFTI/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIONIFTIPython.dir/ITKIONIFTIPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIONIFTI/ITKIONIFTIPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIONIFTI/CMakeFiles/ITKIONIFTIPython.dir/itkNiftiImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOMeta && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOMetaPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOMetaPython.so CMakeFiles/ITKIOMetaPython.dir/ITKIOMetaPython.cpp.o CMakeFiles/ITKIOMetaPython.dir/itkMetaImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 67%] Built target ITKIOMetaPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDPython.dir/build.make Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkNrrdImageIOPython.cpp, ../../../lib/itkNrrdImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIONIFTI && /usr/bin/c++ -DITKIONIFTIPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/NIFTI/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIONIFTIPython.dir/itkNiftiImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIONIFTI/itkNiftiImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Linking CXX shared module ../../../lib/_ITKIONIFTIPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIONIFTI && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIONIFTIPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIONIFTIPython.so CMakeFiles/ITKIONIFTIPython.dir/ITKIONIFTIPython.cpp.o CMakeFiles/ITKIONIFTIPython.dir/itkNiftiImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 67%] Built target ITKIONIFTIPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGPython.dir/build.make Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkPNGImageIOPython.cpp, ../../../lib/itkPNGImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIONRRD/itkNrrdImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNrrdImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating ITKIONRRDPython.cpp, ../../../lib/ITKIONRRDPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIONRRD/ITKIONRRDPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIONRRD.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NRRD/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIONRRD /<>/BUILD/Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONRRDPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDPython.dir/build.make Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDPython.dir/ITKIONRRDPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIONRRD && /usr/bin/c++ -DITKIONRRDPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/NRRD/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIONRRDPython.dir/ITKIONRRDPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIONRRD/ITKIONRRDPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIONRRD/CMakeFiles/ITKIONRRDPython.dir/itkNrrdImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIONRRD && /usr/bin/c++ -DITKIONRRDPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/NRRD/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIONRRDPython.dir/itkNrrdImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIONRRD/itkNrrdImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Linking CXX shared module ../../../lib/_ITKIONRRDPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIONRRD && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIONRRDPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIONRRDPython.so CMakeFiles/ITKIONRRDPython.dir/ITKIONRRDPython.cpp.o CMakeFiles/ITKIONRRDPython.dir/itkNrrdImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 67%] Built target ITKIONRRDPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFPython.dir/build.make Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFPython.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOPNG/itkPNGImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPNGImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkTIFFImageIOPython.cpp, ../../../lib/itkTIFFImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating ITKIOPNGPython.cpp, ../../../lib/ITKIOPNGPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOPNG/ITKIOPNGPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOPNG.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/PNG/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOPNG /<>/BUILD/Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOPNGPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGPython.dir/build.make Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGPython.dir/ITKIOPNGPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOPNG && /usr/bin/c++ -DITKIOPNGPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/PNG/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOPNGPython.dir/ITKIOPNGPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOPNG/ITKIOPNGPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIOPNG/CMakeFiles/ITKIOPNGPython.dir/itkPNGImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOPNG && /usr/bin/c++ -DITKIOPNGPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/PNG/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOPNGPython.dir/itkPNGImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOPNG/itkPNGImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Linking CXX shared module ../../../lib/_ITKIOPNGPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOPNG && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOPNGPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOPNGPython.so CMakeFiles/ITKIOPNGPython.dir/ITKIOPNGPython.cpp.o CMakeFiles/ITKIOPNGPython.dir/itkPNGImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 67%] Built target ITKIOPNGPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKPython.dir/build.make Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkVTKImageIOPython.cpp, ../../../lib/itkVTKImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOTIFF/itkTIFFImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTIFFImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating ITKIOTIFFPython.cpp, ../../../lib/ITKIOTIFFPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOTIFF/ITKIOTIFFPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOTIFF.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TIFF/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOTIFF /<>/BUILD/Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTIFFPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFPython.dir/build.make Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFPython.dir/ITKIOTIFFPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTIFF && /usr/bin/c++ -DITKIOTIFFPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/TIFF/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOTIFFPython.dir/ITKIOTIFFPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOTIFF/ITKIOTIFFPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIOTIFF/CMakeFiles/ITKIOTIFFPython.dir/itkTIFFImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOVTK/itkVTKImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVTKImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating ITKIOVTKPython.cpp, ../../../lib/ITKIOVTKPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOVTK/ITKIOVTKPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOVTK.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/VTK/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOVTK /<>/BUILD/Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOVTKPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKPython.dir/build.make Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKPython.dir/ITKIOVTKPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTIFF && /usr/bin/c++ -DITKIOTIFFPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/TIFF/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOTIFFPython.dir/itkTIFFImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOTIFF/itkTIFFImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Linking CXX shared module ../../../lib/_ITKIOTIFFPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTIFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTIFFPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOTIFFPython.so CMakeFiles/ITKIOTIFFPython.dir/ITKIOTIFFPython.cpp.o CMakeFiles/ITKIOTIFFPython.dir/itkTIFFImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 67%] Built target ITKIOTIFFPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelSwig.dir/build.make Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/TestKernel/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKTestKernel /<>/BUILD/Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTestKernelSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelSwig.dir/build.make Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelSwig.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOVTK && /usr/bin/c++ -DITKIOVTKPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/VTK/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOVTKPython.dir/ITKIOVTKPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOVTK/ITKIOVTKPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating ../../Typedefs/itkComparisonImageFilter.i, ../../Typedefs/itkPipelineMonitorImageFilter.i, ../../Typedefs/itkRandomImageSource.i, ../../Typedefs/itkComparisonImageFilterSwigInterface.h, ../../Typedefs/itkPipelineMonitorImageFilterSwigInterface.h, ../../Typedefs/itkRandomImageSourceSwigInterface.h, ../../Typedefs/itkComparisonImageFilter.idx, ../../Typedefs/itkPipelineMonitorImageFilter.idx, ../../Typedefs/itkRandomImageSource.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIOVTK/CMakeFiles/ITKIOVTKPython.dir/itkVTKImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOVTK && /usr/bin/c++ -DITKIOVTKPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/VTK/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOVTKPython.dir/itkVTKImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOVTK/itkVTKImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Linking CXX shared module ../../../lib/_ITKIOVTKPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOVTK && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOVTKPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOVTKPython.so CMakeFiles/ITKIOVTKPython.dir/ITKIOVTKPython.cpp.o CMakeFiles/ITKIOVTKPython.dir/itkVTKImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 67%] Built target ITKIOVTKPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/build.make Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkLabelObjectLinePython.cpp, ../../../lib/itkLabelObjectLinePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelObjectLinePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelObjectLine.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkLabelObjectPython.cpp, ../../../lib/itkLabelObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTestKernel && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKTestKernel.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOBMP.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOGDCM.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOGIPL.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOJPEG.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOMeta.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIONIFTI.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIONRRD.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOPNG.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOTIFF.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOVTK.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkComparisonImageFilter;itkPipelineMonitorImageFilter;itkRandomImageSource" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 67%] Built target ITKTestKernelSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposePython.dir/build.make Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposePython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkComposeImageFilterPython.cpp, ../../../lib/itkComposeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkShapeLabelObjectPython.cpp, ../../../lib/itkShapeLabelObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow/itkBinaryMinMaxCurvatureFlowImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryMinMaxCurvatureFlowImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating ITKCurvatureFlowPython.cpp, ../../../lib/ITKCurvatureFlowPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow/ITKCurvatureFlowPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKCurvatureFlow.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/CurvatureFlow/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCurvatureFlowPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowPython.dir/build.make Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowPython.dir/ITKCurvatureFlowPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow && /usr/bin/c++ -DITKCurvatureFlowPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/CurvatureFlow/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCurvatureFlowPython.dir/ITKCurvatureFlowPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow/ITKCurvatureFlowPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowPython.dir/itkCurvatureFlowImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeLabelObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShapeLabelObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkStatisticsLabelObjectPython.cpp, ../../../lib/itkStatisticsLabelObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsLabelObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStatisticsLabelObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating ITKLabelMapBasePython.cpp, ../../../lib/ITKLabelMapBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow && /usr/bin/c++ -DITKCurvatureFlowPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/CurvatureFlow/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCurvatureFlowPython.dir/itkCurvatureFlowImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow/itkCurvatureFlowImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowPython.dir/itkMinMaxCurvatureFlowImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/itkVectorCastImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorCastImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating ITKImageFilterBasePython.cpp, ../../../lib/ITKImageFilterBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/ITKImageFilterBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageFilterBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFilterBase/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageFilterBase /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBasePython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFilterBasePython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBasePython.dir/build.make Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBasePython.dir/build make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBasePython.dir/ITKImageFilterBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/c++ -DITKImageFilterBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFilterBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFilterBasePython.dir/ITKImageFilterBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/ITKImageFilterBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBasePython.dir/itkBoxImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/c++ -DITKImageFilterBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFilterBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFilterBasePython.dir/itkBoxImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/itkBoxImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBasePython.dir/itkCastImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/c++ -DITKIOImageBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/ImageBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOImageBasePython.dir/itkImageFileWriterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOImageBase/itkImageFileWriterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBasePython.dir/itkImageSeriesReaderPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow && /usr/bin/c++ -DITKCurvatureFlowPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/CurvatureFlow/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCurvatureFlowPython.dir/itkMinMaxCurvatureFlowImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow/itkMinMaxCurvatureFlowImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKCurvatureFlow/CMakeFiles/ITKCurvatureFlowPython.dir/itkBinaryMinMaxCurvatureFlowImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/ITKLabelMapBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKLabelMapBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkLabelMapFilterPython.cpp, ../../../lib/itkLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/c++ -DITKIOImageBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/ImageBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOImageBasePython.dir/itkImageFileReaderPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOImageBase/itkImageFileReaderPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKIOImageBase/CMakeFiles/ITKIOImageBasePython.dir/itkImageSeriesWriterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow && /usr/bin/c++ -DITKCurvatureFlowPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/CurvatureFlow/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCurvatureFlowPython.dir/itkBinaryMinMaxCurvatureFlowImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow/itkBinaryMinMaxCurvatureFlowImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Linking CXX shared module ../../../lib/_ITKCurvatureFlowPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCurvatureFlow && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCurvatureFlowPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKCurvatureFlowPython.so CMakeFiles/ITKCurvatureFlowPython.dir/ITKCurvatureFlowPython.cpp.o CMakeFiles/ITKCurvatureFlowPython.dir/itkCurvatureFlowImageFilterPython.cpp.o CMakeFiles/ITKCurvatureFlowPython.dir/itkMinMaxCurvatureFlowImageFilterPython.cpp.o CMakeFiles/ITKCurvatureFlowPython.dir/itkBinaryMinMaxCurvatureFlowImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 67%] Built target ITKCurvatureFlowPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshPython.dir/build.make Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkMeshBasePython.cpp, ../../../lib/itkMeshBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkInPlaceLabelMapFilterPython.cpp, ../../../lib/itkInPlaceLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageCompose/itkComposeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkComposeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkJoinSeriesImageFilterPython.cpp, ../../../lib/itkJoinSeriesImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/c++ -DITKImageFilterBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFilterBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFilterBasePython.dir/itkCastImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/itkCastImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBasePython.dir/itkNoiseImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMesh/itkMeshBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMeshBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkMeshSourcePython.cpp, ../../../lib/itkMeshSourcePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkInPlaceLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkInPlaceLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkChangeRegionLabelMapFilterPython.cpp, ../../../lib/itkChangeRegionLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMesh/itkMeshSourcePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMeshSource.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkImageToMeshFilterPython.cpp, ../../../lib/itkImageToMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/c++ -DITKImageFilterBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFilterBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFilterBasePython.dir/itkNoiseImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/itkNoiseImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBasePython.dir/itkRecursiveSeparableImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/c++ -DITKImageFilterBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFilterBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFilterBasePython.dir/itkRecursiveSeparableImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/itkRecursiveSeparableImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKImageFilterBase/CMakeFiles/ITKImageFilterBasePython.dir/itkVectorCastImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkChangeRegionLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkChangeRegionLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkAggregateLabelMapFilterPython.cpp, ../../../lib/itkAggregateLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMesh/itkImageToMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageToMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkMeshToMeshFilterPython.cpp, ../../../lib/itkMeshToMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMesh/itkMeshToMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMeshToMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkBinaryMask3DMeshSourcePython.cpp, ../../../lib/itkBinaryMask3DMeshSourcePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkAggregateLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAggregateLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkAutoCropLabelMapFilterPython.cpp, ../../../lib/itkAutoCropLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/c++ -DITKIOImageBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/ImageBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOImageBasePython.dir/itkImageSeriesReaderPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOImageBase/itkImageSeriesReaderPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating itkBinaryFillholeImageFilterPython.cpp, ../../../lib/itkBinaryFillholeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMesh/itkBinaryMask3DMeshSourcePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryMask3DMeshSource.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Generating ITKMeshPython.cpp, ../../../lib/ITKMeshPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMesh/ITKMeshPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKMesh.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Mesh/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKMesh /<>/BUILD/Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMeshPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshPython.dir/build.make Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshPython.dir/ITKMeshPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/c++ -DITKMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Mesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMeshPython.dir/ITKMeshPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMesh/ITKMeshPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Building CXX object Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshPython.dir/itkMeshBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/c++ -DITKIOImageBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/ImageBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOImageBasePython.dir/itkImageSeriesWriterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOImageBase/itkImageSeriesWriterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 67%] Linking CXX shared module ../../../lib/_ITKIOImageBasePython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOImageBase && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOImageBasePython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOImageBasePython.so CMakeFiles/ITKIOImageBasePython.dir/ITKIOImageBasePython.cpp.o CMakeFiles/ITKIOImageBasePython.dir/ITKIOImageBaseBasePython.cpp.o CMakeFiles/ITKIOImageBasePython.dir/itkImageFileReaderPython.cpp.o CMakeFiles/ITKIOImageBasePython.dir/itkImageFileWriterPython.cpp.o CMakeFiles/ITKIOImageBasePython.dir/itkImageSeriesReaderPython.cpp.o CMakeFiles/ITKIOImageBasePython.dir/itkImageSeriesWriterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 68%] Built target ITKIOImageBasePython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsSwig.dir/build.make Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/SpatialObjects/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKSpatialObjects /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSpatialObjectsSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsSwig.dir/build.make Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 68%] Generating ../../Typedefs/itkSpatialObjectProperty.i, ../../Typedefs/itkAffineGeometryFrame.i, ../../Typedefs/itkSpatialObjectBase.i, ../../Typedefs/itkSpatialObjectPoint.i, ../../Typedefs/itkContourSpatialObjectPoint.i, ../../Typedefs/itkDTITubeSpatialObjectPoint.i, ../../Typedefs/itkVesselTubeSpatialObjectPoint.i, ../../Typedefs/itkPointBasedSpatialObject.i, ../../Typedefs/itkImageSpatialObject.i, ../../Typedefs/itkBlobSpatialObject.i, ../../Typedefs/itkPolygonSpatialObject.i, ../../Typedefs/itkArrowSpatialObject.i, ../../Typedefs/itkBoxSpatialObject.i, ../../Typedefs/itkContourSpatialObject.i, ../../Typedefs/itkDTITubeSpatialObject.i, ../../Typedefs/itkEllipseSpatialObject.i, ../../Typedefs/itkGaussianSpatialObject.i, ../../Typedefs/itkGroupSpatialObject.i, ../../Typedefs/itkImageMaskSpatialObject.i, ../../Typedefs/itkLandmarkSpatialObject.i, ../../Typedefs/itkLineSpatialObject.i, ../../Typedefs/itkLineSpatialObjectPoint.i, ../../Typedefs/itkMetaConverterBase.i, ../../Typedefs/itkPlaneSpatialObject.i, ../../Typedefs/itkPolygonGroupSpatialObject.i, ../../Typedefs/itkSceneSpatialObject.i, ../../Typedefs/itkSpatialObjectToImageFilter.i, ../../Typedefs/itkSurfaceSpatialObject.i, ../../Typedefs/itkSurfaceSpatialObjectPoint.i, ../../Typedefs/itkTubeSpatialObjectPoint.i, ../../Typedefs/itkVesselTubeSpatialObject.i, ../../Typedefs/itkSpatialObjectPropertySwigInterface.h, ../../Typedefs/itkAffineGeometryFrameSwigInterface.h, ../../Typedefs/itkSpatialObjectBaseSwigInterface.h, ../../Typedefs/itkSpatialObjectPointSwigInterface.h, ../../Typedefs/itkContourSpatialObjectPointSwigInterface.h, ../../Typedefs/itkDTITubeSpatialObjectPointSwigInterface.h, ../../Typedefs/itkVesselTubeSpatialObjectPointSwigInterface.h, ../../Typedefs/itkPointBasedSpatialObjectSwigInterface.h, ../../Typedefs/itkImageSpatialObjectSwigInterface.h, ../../Typedefs/itkBlobSpatialObjectSwigInterface.h, ../../Typedefs/itkPolygonSpatialObjectSwigInterface.h, ../../Typedefs/itkArrowSpatialObjectSwigInterface.h, ../../Typedefs/itkBoxSpatialObjectSwigInterface.h, ../../Typedefs/itkContourSpatialObjectSwigInterface.h, ../../Typedefs/itkDTITubeSpatialObjectSwigInterface.h, ../../Typedefs/itkEllipseSpatialObjectSwigInterface.h, ../../Typedefs/itkGaussianSpatialObjectSwigInterface.h, ../../Typedefs/itkGroupSpatialObjectSwigInterface.h, ../../Typedefs/itkImageMaskSpatialObjectSwigInterface.h, ../../Typedefs/itkLandmarkSpatialObjectSwigInterface.h, ../../Typedefs/itkLineSpatialObjectSwigInterface.h, ../../Typedefs/itkLineSpatialObjectPointSwigInterface.h, ../../Typedefs/itkMetaConverterBaseSwigInterface.h, ../../Typedefs/itkPlaneSpatialObjectSwigInterface.h, ../../Typedefs/itkPolygonGroupSpatialObjectSwigInterface.h, ../../Typedefs/itkSceneSpatialObjectSwigInterface.h, ../../Typedefs/itkSpatialObjectToImageFilterSwigInterface.h, ../../Typedefs/itkSurfaceSpatialObjectSwigInterface.h, ../../Typedefs/itkSurfaceSpatialObjectPointSwigInterface.h, ../../Typedefs/itkTubeSpatialObjectPointSwigInterface.h, ../../Typedefs/itkVesselTubeSpatialObjectSwigInterface.h, ../../Typedefs/itkSpatialObjectProperty.idx, ../../Typedefs/itkAffineGeometryFrame.idx, ../../Typedefs/itkSpatialObjectBase.idx, ../../Typedefs/itkSpatialObjectPoint.idx, ../../Typedefs/itkContourSpatialObjectPoint.idx, ../../Typedefs/itkDTITubeSpatialObjectPoint.idx, ../../Typedefs/itkVesselTubeSpatialObjectPoint.idx, ../../Typedefs/itkPointBasedSpatialObject.idx, ../../Typedefs/itkImageSpatialObject.idx, ../../Typedefs/itkBlobSpatialObject.idx, ../../Typedefs/itkPolygonSpatialObject.idx, ../../Typedefs/itkArrowSpatialObject.idx, ../../Typedefs/itkBoxSpatialObject.idx, ../../Typedefs/itkContourSpatialObject.idx, ../../Typedefs/itkDTITubeSpatialObject.idx, ../../Typedefs/itkEllipseSpatialObject.idx, ../../Typedefs/itkGaussianSpatialObject.idx, ../../Typedefs/itkGroupSpatialObject.idx, ../../Typedefs/itkImageMaskSpatialObject.idx, ../../Typedefs/itkLandmarkSpatialObject.idx, ../../Typedefs/itkLineSpatialObject.idx, ../../Typedefs/itkLineSpatialObjectPoint.idx, ../../Typedefs/itkMetaConverterBase.idx, ../../Typedefs/itkPlaneSpatialObject.idx, ../../Typedefs/itkPolygonGroupSpatialObject.idx, ../../Typedefs/itkSceneSpatialObject.idx, ../../Typedefs/itkSpatialObjectToImageFilter.idx, ../../Typedefs/itkSurfaceSpatialObject.idx, ../../Typedefs/itkSurfaceSpatialObjectPoint.idx, ../../Typedefs/itkTubeSpatialObjectPoint.idx, ../../Typedefs/itkVesselTubeSpatialObject.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageCompose/itkJoinSeriesImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkJoinSeriesImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 68%] Generating ITKImageComposePython.cpp, ../../../lib/ITKImageComposePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageCompose/ITKImageComposePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageCompose.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageCompose/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageCompose /<>/BUILD/Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposePython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageComposePython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposePython.dir/build.make Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposePython.dir/build make[3]: Entering directory '/<>/BUILD' [ 68%] Building CXX object Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposePython.dir/ITKImageComposePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompose && /usr/bin/c++ -DITKImageComposePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageCompose/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageComposePython.dir/ITKImageComposePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageCompose/ITKImageComposePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 68%] Building CXX object Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposePython.dir/itkComposeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkAutoCropLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAutoCropLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 68%] Generating itkBinaryGrindPeakImageFilterPython.cpp, ../../../lib/itkBinaryGrindPeakImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryFillholeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryFillholeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkBinaryImageToLabelMapFilterPython.cpp, ../../../lib/itkBinaryImageToLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKSpatialObjects.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFunction.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKMesh.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKTransform.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkSpatialObjectProperty;itkAffineGeometryFrame;itkSpatialObjectBase;itkSpatialObjectPoint;itkContourSpatialObjectPoint;itkDTITubeSpatialObjectPoint;itkVesselTubeSpatialObjectPoint;itkPointBasedSpatialObject;itkImageSpatialObject;itkBlobSpatialObject;itkPolygonSpatialObject;itkArrowSpatialObject;itkBoxSpatialObject;itkContourSpatialObject;itkDTITubeSpatialObject;itkEllipseSpatialObject;itkGaussianSpatialObject;itkGroupSpatialObject;itkImageMaskSpatialObject;itkLandmarkSpatialObject;itkLineSpatialObject;itkLineSpatialObjectPoint;itkMetaConverterBase;itkPlaneSpatialObject;itkPolygonGroupSpatialObject;itkSceneSpatialObject;itkSpatialObjectToImageFilter;itkSurfaceSpatialObject;itkSurfaceSpatialObjectPoint;itkTubeSpatialObjectPoint;itkVesselTubeSpatialObject" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 69%] Built target ITKSpatialObjectsSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKPath/CMakeFiles/ITKPathPython.dir/build.make Wrapping/Modules/ITKPath/CMakeFiles/ITKPathPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkPathBasePython.cpp, ../../../lib/itkPathBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKPath/itkPathBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPathBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkPolyLineParametricPathPython.cpp, ../../../lib/itkPolyLineParametricPathPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/c++ -DITKImageFilterBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFilterBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFilterBasePython.dir/itkVectorCastImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFilterBase/itkVectorCastImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Linking CXX shared module ../../../lib/_ITKImageFilterBasePython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFilterBase && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageFilterBasePython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageFilterBasePython.so CMakeFiles/ITKImageFilterBasePython.dir/ITKImageFilterBasePython.cpp.o CMakeFiles/ITKImageFilterBasePython.dir/itkBoxImageFilterPython.cpp.o CMakeFiles/ITKImageFilterBasePython.dir/itkCastImageFilterPython.cpp.o CMakeFiles/ITKImageFilterBasePython.dir/itkNoiseImageFilterPython.cpp.o CMakeFiles/ITKImageFilterBasePython.dir/itkRecursiveSeparableImageFilterPython.cpp.o CMakeFiles/ITKImageFilterBasePython.dir/itkVectorCastImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 69%] Built target ITKImageFilterBasePython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshSwig.dir/build.make Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/QuadEdgeMesh/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMeshSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshSwig.dir/build.make Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 69%] Generating ../../Typedefs/itkQuadEdge.i, ../../Typedefs/itkGeometricalQuadEdge.i, ../../Typedefs/itkQuadEdgeMeshPoint.i, ../../Typedefs/itkQuadEdgeMeshTraits.i, ../../Typedefs/itkQuadEdgeCellTraitsInfo.i, ../../Typedefs/itkQuadEdgeMeshLineCell.i, ../../Typedefs/itkQuadEdgeMeshBase.i, ../../Typedefs/itkQuadEdgeMeshToQuadEdgeMeshFilter.i, ../../Typedefs/itkQuadEdgeSwigInterface.h, ../../Typedefs/itkGeometricalQuadEdgeSwigInterface.h, ../../Typedefs/itkQuadEdgeMeshPointSwigInterface.h, ../../Typedefs/itkQuadEdgeMeshTraitsSwigInterface.h, ../../Typedefs/itkQuadEdgeCellTraitsInfoSwigInterface.h, ../../Typedefs/itkQuadEdgeMeshLineCellSwigInterface.h, ../../Typedefs/itkQuadEdgeMeshBaseSwigInterface.h, ../../Typedefs/itkQuadEdgeMeshToQuadEdgeMeshFilterSwigInterface.h, ../../Typedefs/itkQuadEdge.idx, ../../Typedefs/itkGeometricalQuadEdge.idx, ../../Typedefs/itkQuadEdgeMeshPoint.idx, ../../Typedefs/itkQuadEdgeMeshTraits.idx, ../../Typedefs/itkQuadEdgeCellTraitsInfo.idx, ../../Typedefs/itkQuadEdgeMeshLineCell.idx, ../../Typedefs/itkQuadEdgeMeshBase.idx, ../../Typedefs/itkQuadEdgeMeshToQuadEdgeMeshFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKPath/itkPolyLineParametricPathPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPolyLineParametricPath.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkPathToImageFilterPython.cpp, ../../../lib/itkPathToImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKQuadEdgeMesh.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKMesh.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkQuadEdge;itkGeometricalQuadEdge;itkQuadEdgeMeshPoint;itkQuadEdgeMeshTraits;itkQuadEdgeCellTraitsInfo;itkQuadEdgeMeshLineCell;itkQuadEdgeMeshBase;itkQuadEdgeMeshToQuadEdgeMeshFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 69%] Built target ITKQuadEdgeMeshSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingPython.dir/build.make Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkBinomialBlurImageFilterPython.cpp, ../../../lib/itkBinomialBlurImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryGrindPeakImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryGrindPeakImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkBinaryImageToShapeLabelMapFilterPython.cpp, ../../../lib/itkBinaryImageToShapeLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryImageToLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryImageToLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkBinaryImageToStatisticsLabelMapFilterPython.cpp, ../../../lib/itkBinaryImageToStatisticsLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompose && /usr/bin/c++ -DITKImageComposePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageCompose/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageComposePython.dir/itkComposeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageCompose/itkComposeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Building CXX object Wrapping/Modules/ITKImageCompose/CMakeFiles/ITKImageComposePython.dir/itkJoinSeriesImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/c++ -DITKMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Mesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMeshPython.dir/itkMeshBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMesh/itkMeshBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Building CXX object Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshPython.dir/itkMeshSourcePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKPath/itkPathToImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPathToImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkParametricPathPython.cpp, ../../../lib/itkParametricPathPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompose && /usr/bin/c++ -DITKImageComposePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageCompose/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageComposePython.dir/itkJoinSeriesImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageCompose/itkJoinSeriesImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Linking CXX shared module ../../../lib/_ITKImageComposePython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompose && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageComposePython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageComposePython.so CMakeFiles/ITKImageComposePython.dir/ITKImageComposePython.cpp.o CMakeFiles/ITKImageComposePython.dir/itkComposeImageFilterPython.cpp.o CMakeFiles/ITKImageComposePython.dir/itkJoinSeriesImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 69%] Built target ITKImageComposePython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesPython.dir/build.make Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkGaborImageSourcePython.cpp, ../../../lib/itkGaborImageSourcePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/c++ -DITKMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Mesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMeshPython.dir/itkMeshSourcePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMesh/itkMeshSourcePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Building CXX object Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshPython.dir/itkImageToMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKPath/itkParametricPathPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkParametricPath.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkImageToPathFilterPython.cpp, ../../../lib/itkImageToPathFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/c++ -DITKMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Mesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMeshPython.dir/itkImageToMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMesh/itkImageToMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Building CXX object Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshPython.dir/itkMeshToMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryImageToShapeLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryImageToShapeLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkBinaryNotImageFilterPython.cpp, ../../../lib/itkBinaryNotImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryImageToStatisticsLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryImageToStatisticsLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkBinaryReconstructionByDilationImageFilterPython.cpp, ../../../lib/itkBinaryReconstructionByDilationImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSmoothing/itkBinomialBlurImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinomialBlurImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkDiscreteGaussianImageFilterPython.cpp, ../../../lib/itkDiscreteGaussianImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKPath/itkImageToPathFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageToPathFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkPathSourcePython.cpp, ../../../lib/itkPathSourcePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/c++ -DITKMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Mesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMeshPython.dir/itkMeshToMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMesh/itkMeshToMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Building CXX object Wrapping/Modules/ITKMesh/CMakeFiles/ITKMeshPython.dir/itkBinaryMask3DMeshSourcePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageSources/itkGaborImageSourcePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGaborImageSource.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating itkGaussianImageSourcePython.cpp, ../../../lib/itkGaussianImageSourcePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKPath/itkPathSourcePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPathSource.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Generating ITKPathPython.cpp, ../../../lib/ITKPathPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKPath/ITKPathPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKPath.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Path/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKPath /<>/BUILD/Wrapping/Modules/ITKPath/CMakeFiles/ITKPathPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPathPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKPath/CMakeFiles/ITKPathPython.dir/build.make Wrapping/Modules/ITKPath/CMakeFiles/ITKPathPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 69%] Building CXX object Wrapping/Modules/ITKPath/CMakeFiles/ITKPathPython.dir/ITKPathPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/c++ -DITKPathPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Path/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPathPython.dir/ITKPathPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKPath/ITKPathPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Building CXX object Wrapping/Modules/ITKPath/CMakeFiles/ITKPathPython.dir/itkPathBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/c++ -DITKMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Mesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMeshPython.dir/itkBinaryMask3DMeshSourcePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMesh/itkBinaryMask3DMeshSourcePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 69%] Linking CXX shared module ../../../lib/_ITKMeshPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMeshPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKMeshPython.so CMakeFiles/ITKMeshPython.dir/ITKMeshPython.cpp.o CMakeFiles/ITKMeshPython.dir/itkMeshBasePython.cpp.o CMakeFiles/ITKMeshPython.dir/itkMeshSourcePython.cpp.o CMakeFiles/ITKMeshPython.dir/itkImageToMeshFilterPython.cpp.o CMakeFiles/ITKMeshPython.dir/itkMeshToMeshFilterPython.cpp.o CMakeFiles/ITKMeshPython.dir/itkBinaryMask3DMeshSourcePython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 70%] Built target ITKMeshPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersPython.dir/build.make Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 70%] Generating ITKCostFunctionsPython.cpp, ../../../lib/ITKCostFunctionsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/c++ -DITKPathPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Path/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPathPython.dir/itkPathBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKPath/itkPathBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKPath/CMakeFiles/ITKPathPython.dir/itkPolyLineParametricPathPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/c++ -DITKPathPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Path/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPathPython.dir/itkPolyLineParametricPathPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKPath/itkPolyLineParametricPathPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKPath/CMakeFiles/ITKPathPython.dir/itkPathToImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizers/ITKCostFunctionsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKCostFunctions.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating ITKOptimizersBasePython.cpp, ../../../lib/ITKOptimizersBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizers/ITKOptimizersBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKOptimizersBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkCostFunctionPython.cpp, ../../../lib/itkCostFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizers/itkCostFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCostFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating ITKOptimizersPython.cpp, ../../../lib/ITKOptimizersPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizers/ITKOptimizersPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKOptimizers.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizers/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKOptimizers /<>/BUILD/Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizersPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersPython.dir/build.make Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersPython.dir/ITKOptimizersPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizers && /usr/bin/c++ -DITKOptimizersPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizers/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersPython.dir/ITKOptimizersPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizers/ITKOptimizersPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersPython.dir/ITKCostFunctionsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizers && /usr/bin/c++ -DITKOptimizersPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizers/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersPython.dir/ITKCostFunctionsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizers/ITKCostFunctionsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersPython.dir/ITKOptimizersBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/c++ -DITKPathPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Path/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPathPython.dir/itkPathToImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKPath/itkPathToImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKPath/CMakeFiles/ITKPathPython.dir/itkParametricPathPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizers && /usr/bin/c++ -DITKOptimizersPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizers/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersPython.dir/ITKOptimizersBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizers/ITKOptimizersBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKOptimizers/CMakeFiles/ITKOptimizersPython.dir/itkCostFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/c++ -DITKPathPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Path/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPathPython.dir/itkParametricPathPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKPath/itkParametricPathPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKPath/CMakeFiles/ITKPathPython.dir/itkImageToPathFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizers && /usr/bin/c++ -DITKOptimizersPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizers/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersPython.dir/itkCostFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizers/itkCostFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Linking CXX shared module ../../../lib/_ITKOptimizersPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKOptimizersPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKOptimizersPython.so CMakeFiles/ITKOptimizersPython.dir/ITKOptimizersPython.cpp.o CMakeFiles/ITKOptimizersPython.dir/ITKCostFunctionsPython.cpp.o CMakeFiles/ITKOptimizersPython.dir/ITKOptimizersBasePython.cpp.o CMakeFiles/ITKOptimizersPython.dir/itkCostFunctionPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 70%] Built target ITKOptimizersPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapPython.dir/build.make Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkColormapFunctionPython.cpp, ../../../lib/itkColormapFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/c++ -DITKPathPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Path/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPathPython.dir/itkImageToPathFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKPath/itkImageToPathFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKPath/CMakeFiles/ITKPathPython.dir/itkPathSourcePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageSources/itkGaussianImageSourcePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGaussianImageSource.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkGenerateImageSourcePython.cpp, ../../../lib/itkGenerateImageSourcePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKColormap/itkColormapFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkColormapFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkCustomColormapFunctionPython.cpp, ../../../lib/itkCustomColormapFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryReconstructionByDilationImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryReconstructionByDilationImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkBinaryReconstructionByErosionImageFilterPython.cpp, ../../../lib/itkBinaryReconstructionByErosionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/c++ -DITKPathPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Path/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPathPython.dir/itkPathSourcePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKPath/itkPathSourcePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Linking CXX shared module ../../../lib/_ITKPathPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPath && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKPathPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKPathPython.so CMakeFiles/ITKPathPython.dir/ITKPathPython.cpp.o CMakeFiles/ITKPathPython.dir/itkPathBasePython.cpp.o CMakeFiles/ITKPathPython.dir/itkPolyLineParametricPathPython.cpp.o CMakeFiles/ITKPathPython.dir/itkPathToImageFilterPython.cpp.o CMakeFiles/ITKPathPython.dir/itkParametricPathPython.cpp.o CMakeFiles/ITKPathPython.dir/itkImageToPathFilterPython.cpp.o CMakeFiles/ITKPathPython.dir/itkPathSourcePython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 70%] Built target ITKPathPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTSwig.dir/build.make Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FFT/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKFFT /<>/BUILD/Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFFTSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTSwig.dir/build.make Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 70%] Generating ../../Typedefs/itkComplexToComplexFFTImageFilter.i, ../../Typedefs/itkFFTPadImageFilter.i, ../../Typedefs/itkFFTShiftImageFilter.i, ../../Typedefs/itkFFTWComplexToComplexFFTImageFilter.i, ../../Typedefs/itkFFTWForwardFFTImageFilter.i, ../../Typedefs/itkFFTWGlobalConfiguration.i, ../../Typedefs/itkFFTWHalfHermitianToRealInverseFFTImageFilter.i, ../../Typedefs/itkFFTWInverseFFTImageFilter.i, ../../Typedefs/itkFFTWRealToHalfHermitianForwardFFTImageFilter.i, ../../Typedefs/itkForwardFFTImageFilter.i, ../../Typedefs/itkFullToHalfHermitianImageFilter.i, ../../Typedefs/itkHalfHermitianToRealInverseFFTImageFilter.i, ../../Typedefs/itkHalfToFullHermitianImageFilter.i, ../../Typedefs/itkInverseFFTImageFilter.i, ../../Typedefs/itkRealToHalfHermitianForwardFFTImageFilter.i, ../../Typedefs/itkVnlComplexToComplexFFTImageFilter.i, ../../Typedefs/itkVnlForwardFFTImageFilter.i, ../../Typedefs/itkVnlHalfHermitianToRealInverseFFTImageFilter.i, ../../Typedefs/itkVnlInverseFFTImageFilter.i, ../../Typedefs/itkVnlRealToHalfHermitianForwardFFTImageFilter.i, ../../Typedefs/itkComplexToComplexFFTImageFilterSwigInterface.h, ../../Typedefs/itkFFTPadImageFilterSwigInterface.h, ../../Typedefs/itkFFTShiftImageFilterSwigInterface.h, ../../Typedefs/itkFFTWComplexToComplexFFTImageFilterSwigInterface.h, ../../Typedefs/itkFFTWForwardFFTImageFilterSwigInterface.h, ../../Typedefs/itkFFTWGlobalConfigurationSwigInterface.h, ../../Typedefs/itkFFTWHalfHermitianToRealInverseFFTImageFilterSwigInterface.h, ../../Typedefs/itkFFTWInverseFFTImageFilterSwigInterface.h, ../../Typedefs/itkFFTWRealToHalfHermitianForwardFFTImageFilterSwigInterface.h, ../../Typedefs/itkForwardFFTImageFilterSwigInterface.h, ../../Typedefs/itkFullToHalfHermitianImageFilterSwigInterface.h, ../../Typedefs/itkHalfHermitianToRealInverseFFTImageFilterSwigInterface.h, ../../Typedefs/itkHalfToFullHermitianImageFilterSwigInterface.h, ../../Typedefs/itkInverseFFTImageFilterSwigInterface.h, ../../Typedefs/itkRealToHalfHermitianForwardFFTImageFilterSwigInterface.h, ../../Typedefs/itkVnlComplexToComplexFFTImageFilterSwigInterface.h, ../../Typedefs/itkVnlForwardFFTImageFilterSwigInterface.h, ../../Typedefs/itkVnlHalfHermitianToRealInverseFFTImageFilterSwigInterface.h, ../../Typedefs/itkVnlInverseFFTImageFilterSwigInterface.h, ../../Typedefs/itkVnlRealToHalfHermitianForwardFFTImageFilterSwigInterface.h, ../../Typedefs/itkComplexToComplexFFTImageFilter.idx, ../../Typedefs/itkFFTPadImageFilter.idx, ../../Typedefs/itkFFTShiftImageFilter.idx, ../../Typedefs/itkFFTWComplexToComplexFFTImageFilter.idx, ../../Typedefs/itkFFTWForwardFFTImageFilter.idx, ../../Typedefs/itkFFTWGlobalConfiguration.idx, ../../Typedefs/itkFFTWHalfHermitianToRealInverseFFTImageFilter.idx, ../../Typedefs/itkFFTWInverseFFTImageFilter.idx, ../../Typedefs/itkFFTWRealToHalfHermitianForwardFFTImageFilter.idx, ../../Typedefs/itkForwardFFTImageFilter.idx, ../../Typedefs/itkFullToHalfHermitianImageFilter.idx, ../../Typedefs/itkHalfHermitianToRealInverseFFTImageFilter.idx, ../../Typedefs/itkHalfToFullHermitianImageFilter.idx, ../../Typedefs/itkInverseFFTImageFilter.idx, ../../Typedefs/itkRealToHalfHermitianForwardFFTImageFilter.idx, ../../Typedefs/itkVnlComplexToComplexFFTImageFilter.idx, ../../Typedefs/itkVnlForwardFFTImageFilter.idx, ../../Typedefs/itkVnlHalfHermitianToRealInverseFFTImageFilter.idx, ../../Typedefs/itkVnlInverseFFTImageFilter.idx, ../../Typedefs/itkVnlRealToHalfHermitianForwardFFTImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKColormap/itkCustomColormapFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCustomColormapFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkScalarToRGBColormapImageFilterPython.cpp, ../../../lib/itkScalarToRGBColormapImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSmoothing/itkDiscreteGaussianImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDiscreteGaussianImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkMeanImageFilterPython.cpp, ../../../lib/itkMeanImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKFFT.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkComplexToComplexFFTImageFilter;itkFFTPadImageFilter;itkFFTShiftImageFilter;itkFFTWComplexToComplexFFTImageFilter;itkFFTWForwardFFTImageFilter;itkFFTWGlobalConfiguration;itkFFTWHalfHermitianToRealInverseFFTImageFilter;itkFFTWInverseFFTImageFilter;itkFFTWRealToHalfHermitianForwardFFTImageFilter;itkForwardFFTImageFilter;itkFullToHalfHermitianImageFilter;itkHalfHermitianToRealInverseFFTImageFilter;itkHalfToFullHermitianImageFilter;itkInverseFFTImageFilter;itkRealToHalfHermitianForwardFFTImageFilter;itkVnlComplexToComplexFFTImageFilter;itkVnlForwardFFTImageFilter;itkVnlHalfHermitianToRealInverseFFTImageFilter;itkVnlInverseFFTImageFilter;itkVnlRealToHalfHermitianForwardFFTImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 70%] Built target ITKFFTSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadPython.dir/build.make Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkBioRadImageIOPython.cpp, ../../../lib/itkBioRadImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOBioRad/itkBioRadImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBioRadImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating ITKIOBioRadPython.cpp, ../../../lib/ITKIOBioRadPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOBioRad/ITKIOBioRadPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOBioRad.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BioRad/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOBioRad /<>/BUILD/Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBioRadPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadPython.dir/build.make Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadPython.dir/ITKIOBioRadPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOBioRad && /usr/bin/c++ -DITKIOBioRadPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/BioRad/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOBioRadPython.dir/ITKIOBioRadPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOBioRad/ITKIOBioRadPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKIOBioRad/CMakeFiles/ITKIOBioRadPython.dir/itkBioRadImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOBioRad && /usr/bin/c++ -DITKIOBioRadPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/BioRad/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOBioRadPython.dir/itkBioRadImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOBioRad/itkBioRadImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Linking CXX shared module ../../../lib/_ITKIOBioRadPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOBioRad && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOBioRadPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOBioRadPython.so CMakeFiles/ITKIOBioRadPython.dir/ITKIOBioRadPython.cpp.o CMakeFiles/ITKIOBioRadPython.dir/itkBioRadImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageSources/itkGenerateImageSourcePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGenerateImageSource.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkGridImageSourcePython.cpp, ../../../lib/itkGridImageSourcePython.py make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 70%] Built target ITKIOBioRadPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMPython.dir/build.make Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkLSMImageIOPython.cpp, ../../../lib/itkLSMImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOLSM/itkLSMImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLSMImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating ITKIOLSMPython.cpp, ../../../lib/ITKIOLSMPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOLSM/ITKIOLSMPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOLSM.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/LSM/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOLSM /<>/BUILD/Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOLSMPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMPython.dir/build.make Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMPython.dir/ITKIOLSMPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOLSM && /usr/bin/c++ -DITKIOLSMPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/LSM/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOLSMPython.dir/ITKIOLSMPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOLSM/ITKIOLSMPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKIOLSM/CMakeFiles/ITKIOLSMPython.dir/itkLSMImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOLSM && /usr/bin/c++ -DITKIOLSMPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/LSM/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOLSMPython.dir/itkLSMImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOLSM/itkLSMImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Linking CXX shared module ../../../lib/_ITKIOLSMPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOLSM && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOLSMPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOLSMPython.so CMakeFiles/ITKIOLSMPython.dir/ITKIOLSMPython.cpp.o CMakeFiles/ITKIOLSMPython.dir/itkLSMImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 70%] Built target ITKIOLSMPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulatePython.dir/build.make Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulatePython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkStimulateImageIOPython.cpp, ../../../lib/itkStimulateImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOStimulate/itkStimulateImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStimulateImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating ITKIOStimulatePython.cpp, ../../../lib/ITKIOStimulatePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOStimulate/ITKIOStimulatePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOStimulate.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Stimulate/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOStimulate /<>/BUILD/Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulatePython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOStimulatePython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulatePython.dir/build.make Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulatePython.dir/build make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulatePython.dir/ITKIOStimulatePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOStimulate && /usr/bin/c++ -DITKIOStimulatePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/Stimulate/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOStimulatePython.dir/ITKIOStimulatePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOStimulate/ITKIOStimulatePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKIOStimulate/CMakeFiles/ITKIOStimulatePython.dir/itkStimulateImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryReconstructionByErosionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryReconstructionByErosionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkBinaryShapeKeepNObjectsImageFilterPython.cpp, ../../../lib/itkBinaryShapeKeepNObjectsImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOStimulate && /usr/bin/c++ -DITKIOStimulatePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/Stimulate/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOStimulatePython.dir/itkStimulateImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOStimulate/itkStimulateImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Linking CXX shared module ../../../lib/_ITKIOStimulatePython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOStimulate && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOStimulatePython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOStimulatePython.so CMakeFiles/ITKIOStimulatePython.dir/ITKIOStimulatePython.cpp.o CMakeFiles/ITKIOStimulatePython.dir/itkStimulateImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 70%] Built target ITKIOStimulatePython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenPython.dir/build.make Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkEigenAnalysis2DImageFilterPython.cpp, ../../../lib/itkEigenAnalysis2DImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSmoothing/itkMeanImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMeanImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkMedianImageFilterPython.cpp, ../../../lib/itkMedianImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageSources/itkGridImageSourcePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGridImageSource.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkParametricImageSourcePython.cpp, ../../../lib/itkParametricImageSourcePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryShapeKeepNObjectsImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryShapeKeepNObjectsImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkBinaryShapeOpeningImageFilterPython.cpp, ../../../lib/itkBinaryShapeOpeningImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKEigen/itkEigenAnalysis2DImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkEigenAnalysis2DImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating ITKEigenPython.cpp, ../../../lib/ITKEigenPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKEigen/ITKEigenPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKEigen.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Eigen/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKEigen /<>/BUILD/Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKEigenPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenPython.dir/build.make Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenPython.dir/ITKEigenPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKEigen && /usr/bin/c++ -DITKEigenPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Eigen/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKEigenPython.dir/ITKEigenPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKEigen/ITKEigenPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKEigen/CMakeFiles/ITKEigenPython.dir/itkEigenAnalysis2DImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageSources/itkParametricImageSourcePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkParametricImageSource.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkPhysicalPointImageSourcePython.cpp, ../../../lib/itkPhysicalPointImageSourcePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSmoothing/itkMedianImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMedianImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkRecursiveGaussianImageFilterPython.cpp, ../../../lib/itkRecursiveGaussianImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKEigen && /usr/bin/c++ -DITKEigenPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Eigen/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKEigenPython.dir/itkEigenAnalysis2DImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKEigen/itkEigenAnalysis2DImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Linking CXX shared module ../../../lib/_ITKEigenPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKEigen && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKEigenPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKEigenPython.so CMakeFiles/ITKEigenPython.dir/ITKEigenPython.cpp.o CMakeFiles/ITKEigenPython.dir/itkEigenAnalysis2DImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 70%] Built target ITKEigenPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsSwig.dir/build.make Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/SpatialObjects/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSpatialObjectsSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsSwig.dir/build.make Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 70%] Generating ../../Typedefs/itkSpatialObjectReader.i, ../../Typedefs/itkSpatialObjectWriter.i, ../../Typedefs/itkSpatialObjectReaderSwigInterface.h, ../../Typedefs/itkSpatialObjectWriterSwigInterface.h, ../../Typedefs/itkSpatialObjectReader.idx, ../../Typedefs/itkSpatialObjectWriter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOSpatialObjects.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKMesh.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKSpatialObjects.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkSpatialObjectReader;itkSpatialObjectWriter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 70%] Built target ITKIOSpatialObjectsSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLPython.dir/build.make Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkIPLCommonImageIOPython.cpp, ../../../lib/itkIPLCommonImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOIPL/itkIPLCommonImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIPLCommonImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating ITKIOIPLPython.cpp, ../../../lib/ITKIOIPLPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOIPL/ITKIOIPLPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOIPL.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/IPL/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOIPL /<>/BUILD/Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOIPLPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLPython.dir/build.make Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLPython.dir/ITKIOIPLPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOIPL && /usr/bin/c++ -DITKIOIPLPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/IPL/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOIPLPython.dir/ITKIOIPLPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOIPL/ITKIOIPLPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKIOIPL/CMakeFiles/ITKIOIPLPython.dir/itkIPLCommonImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOIPL && /usr/bin/c++ -DITKIOIPLPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/IPL/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOIPLPython.dir/itkIPLCommonImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOIPL/itkIPLCommonImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Linking CXX shared module ../../../lib/_ITKIOIPLPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOIPL && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOIPLPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOIPLPython.so CMakeFiles/ITKIOIPLPython.dir/ITKIOIPLPython.cpp.o CMakeFiles/ITKIOIPLPython.dir/itkIPLCommonImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 70%] Built target ITKIOIPLPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGEPython.dir/build.make Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGEPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkGE4ImageIOPython.cpp, ../../../lib/itkGE4ImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOGE/itkGE4ImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGE4ImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkGE5ImageIOPython.cpp, ../../../lib/itkGE5ImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKColormap/itkScalarToRGBColormapImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScalarToRGBColormapImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOGE/itkGE5ImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGE5ImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating itkGEAdwImageIOPython.cpp, ../../../lib/itkGEAdwImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating ITKColormapPython.cpp, ../../../lib/ITKColormapPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKColormap/ITKColormapPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKColormap.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Colormap/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKColormap /<>/BUILD/Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKColormapPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapPython.dir/build.make Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapPython.dir/ITKColormapPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKColormap && /usr/bin/c++ -DITKColormapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Colormap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKColormapPython.dir/ITKColormapPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKColormap/ITKColormapPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapPython.dir/itkColormapFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOGE/itkGEAdwImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGEAdwImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Generating ITKIOGEPython.cpp, ../../../lib/ITKIOGEPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOGE/ITKIOGEPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOGE.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKColormap && /usr/bin/c++ -DITKColormapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Colormap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKColormapPython.dir/itkColormapFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKColormap/itkColormapFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapPython.dir/itkCustomColormapFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GE/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOGE /<>/BUILD/Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGEPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGEPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGEPython.dir/build.make Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGEPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 70%] Building CXX object Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGEPython.dir/ITKIOGEPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGE && /usr/bin/c++ -DITKIOGEPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/GE/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOGEPython.dir/ITKIOGEPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOGE/ITKIOGEPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGEPython.dir/itkGE4ImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageSources/itkPhysicalPointImageSourcePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPhysicalPointImageSource.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Generating ITKImageSourcesPython.cpp, ../../../lib/ITKImageSourcesPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageSources/ITKImageSourcesPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageSources.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageSources/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageSources /<>/BUILD/Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageSourcesPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesPython.dir/build.make Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesPython.dir/ITKImageSourcesPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGE && /usr/bin/c++ -DITKIOGEPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/GE/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOGEPython.dir/itkGE4ImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOGE/itkGE4ImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGEPython.dir/itkGE5ImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/c++ -DITKImageSourcesPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageSources/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageSourcesPython.dir/ITKImageSourcesPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageSources/ITKImageSourcesPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesPython.dir/itkGaborImageSourcePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKColormap && /usr/bin/c++ -DITKColormapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Colormap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKColormapPython.dir/itkCustomColormapFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKColormap/itkCustomColormapFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKColormap/CMakeFiles/ITKColormapPython.dir/itkScalarToRGBColormapImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGE && /usr/bin/c++ -DITKIOGEPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/GE/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOGEPython.dir/itkGE5ImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOGE/itkGE5ImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKIOGE/CMakeFiles/ITKIOGEPython.dir/itkGEAdwImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGE && /usr/bin/c++ -DITKIOGEPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/GE/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOGEPython.dir/itkGEAdwImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOGE/itkGEAdwImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Linking CXX shared module ../../../lib/_ITKIOGEPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOGE && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOGEPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOGEPython.so CMakeFiles/ITKIOGEPython.dir/ITKIOGEPython.cpp.o CMakeFiles/ITKIOGEPython.dir/itkGE4ImageIOPython.cpp.o CMakeFiles/ITKIOGEPython.dir/itkGE5ImageIOPython.cpp.o CMakeFiles/ITKIOGEPython.dir/itkGEAdwImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 71%] Built target ITKIOGEPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensPython.dir/build.make Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 71%] Generating itkSiemensVisionImageIOPython.cpp, ../../../lib/itkSiemensVisionImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOSiemens/itkSiemensVisionImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSiemensVisionImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Generating ITKIOSiemensPython.cpp, ../../../lib/ITKIOSiemensPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOSiemens/ITKIOSiemensPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOSiemens.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Siemens/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOSiemens /<>/BUILD/Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSiemensPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensPython.dir/build.make Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensPython.dir/ITKIOSiemensPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOSiemens && /usr/bin/c++ -DITKIOSiemensPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/Siemens/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOSiemensPython.dir/ITKIOSiemensPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOSiemens/ITKIOSiemensPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKIOSiemens/CMakeFiles/ITKIOSiemensPython.dir/itkSiemensVisionImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOSiemens && /usr/bin/c++ -DITKIOSiemensPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/Siemens/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOSiemensPython.dir/itkSiemensVisionImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOSiemens/itkSiemensVisionImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Linking CXX shared module ../../../lib/_ITKIOSiemensPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryShapeOpeningImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryShapeOpeningImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Generating itkBinaryStatisticsKeepNObjectsImageFilterPython.cpp, ../../../lib/itkBinaryStatisticsKeepNObjectsImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOSiemens && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOSiemensPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOSiemensPython.so CMakeFiles/ITKIOSiemensPython.dir/ITKIOSiemensPython.cpp.o CMakeFiles/ITKIOSiemensPython.dir/itkSiemensVisionImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 71%] Built target ITKIOSiemensPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5Python.dir/build.make Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5Python.dir/depend make[3]: Entering directory '/<>/BUILD' [ 71%] Generating itkHDF5ImageIOPython.cpp, ../../../lib/itkHDF5ImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOHDF5/itkHDF5ImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHDF5ImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Generating ITKIOHDF5Python.cpp, ../../../lib/ITKIOHDF5Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOHDF5/ITKIOHDF5Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOHDF5.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/HDF5/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOHDF5 /<>/BUILD/Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5Python.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOHDF5Python make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5Python.dir/build.make Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5Python.dir/build make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5Python.dir/ITKIOHDF5Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOHDF5 && /usr/bin/c++ -DITKIOHDF5Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/HDF5/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOHDF5Python.dir/ITKIOHDF5Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOHDF5/ITKIOHDF5Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKIOHDF5/CMakeFiles/ITKIOHDF5Python.dir/itkHDF5ImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOHDF5 && /usr/bin/c++ -DITKIOHDF5Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/HDF5/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOHDF5Python.dir/itkHDF5ImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOHDF5/itkHDF5ImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Linking CXX shared module ../../../lib/_ITKIOHDF5Python.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOHDF5 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOHDF5Python.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOHDF5Python.so CMakeFiles/ITKIOHDF5Python.dir/ITKIOHDF5Python.cpp.o CMakeFiles/ITKIOHDF5Python.dir/itkHDF5ImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 71%] Built target ITKIOHDF5Python make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCPython.dir/build.make Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 71%] Generating itkMRCImageIOPython.cpp, ../../../lib/itkMRCImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/c++ -DITKImageSourcesPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageSources/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageSourcesPython.dir/itkGaborImageSourcePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageSources/itkGaborImageSourcePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesPython.dir/itkGaussianImageSourcePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOMRC/itkMRCImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMRCImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Generating ITKIOMRCPython.cpp, ../../../lib/ITKIOMRCPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOMRC/ITKIOMRCPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOMRC.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/MRC/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOMRC /<>/BUILD/Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMRCPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCPython.dir/build.make Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCPython.dir/ITKIOMRCPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOMRC && /usr/bin/c++ -DITKIOMRCPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/MRC/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOMRCPython.dir/ITKIOMRCPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOMRC/ITKIOMRCPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKIOMRC/CMakeFiles/ITKIOMRCPython.dir/itkMRCImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOMRC && /usr/bin/c++ -DITKIOMRCPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/MRC/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOMRCPython.dir/itkMRCImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOMRC/itkMRCImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Linking CXX shared module ../../../lib/_ITKIOMRCPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOMRC && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOMRCPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOMRCPython.so CMakeFiles/ITKIOMRCPython.dir/ITKIOMRCPython.cpp.o CMakeFiles/ITKIOMRCPython.dir/itkMRCImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 71%] Built target ITKIOMRCPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWPython.dir/build.make Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 71%] Generating itkRawImageIOPython.cpp, ../../../lib/itkRawImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIORAW/itkRawImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRawImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Generating ITKIORAWPython.cpp, ../../../lib/ITKIORAWPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIORAW/ITKIORAWPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIORAW.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/RAW/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIORAW /<>/BUILD/Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIORAWPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWPython.dir/build.make Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWPython.dir/ITKIORAWPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIORAW && /usr/bin/c++ -DITKIORAWPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/RAW/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIORAWPython.dir/ITKIORAWPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIORAW/ITKIORAWPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Building CXX object Wrapping/Modules/ITKIORAW/CMakeFiles/ITKIORAWPython.dir/itkRawImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIORAW && /usr/bin/c++ -DITKIORAWPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/RAW/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIORAWPython.dir/itkRawImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIORAW/itkRawImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Linking CXX shared module ../../../lib/_ITKIORAWPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIORAW && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIORAWPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIORAWPython.so CMakeFiles/ITKIORAWPython.dir/ITKIORAWPython.cpp.o CMakeFiles/ITKIORAWPython.dir/itkRawImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 71%] Built target ITKIORAWPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoisePython.dir/build.make Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoisePython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 71%] Generating itkAdditiveGaussianNoiseImageFilterPython.cpp, ../../../lib/itkAdditiveGaussianNoiseImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKColormap && /usr/bin/c++ -DITKColormapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Colormap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKColormapPython.dir/itkScalarToRGBColormapImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKColormap/itkScalarToRGBColormapImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Linking CXX shared module ../../../lib/_ITKColormapPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKColormap && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKColormapPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKColormapPython.so CMakeFiles/ITKColormapPython.dir/ITKColormapPython.cpp.o CMakeFiles/ITKColormapPython.dir/itkColormapFunctionPython.cpp.o CMakeFiles/ITKColormapPython.dir/itkCustomColormapFunctionPython.cpp.o CMakeFiles/ITKColormapPython.dir/itkScalarToRGBColormapImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 71%] Built target ITKColormapPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringSwig.dir/build.make Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMeshFilteringSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringSwig.dir/build.make Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 71%] Generating ../../Typedefs/itkBorderQuadEdgeMeshFilter.i, ../../Typedefs/itkCleanQuadEdgeMeshFilter.i, ../../Typedefs/itkDelaunayConformingQuadEdgeMeshFilter.i, ../../Typedefs/itkDiscreteCurvatureQuadEdgeMeshFilter.i, ../../Typedefs/itkDiscreteCurvatureTensorQuadEdgeMeshFilter.i, ../../Typedefs/itkDiscreteGaussianCurvatureQuadEdgeMeshFilter.i, ../../Typedefs/itkDiscreteMaximumCurvatureQuadEdgeMeshFilter.i, ../../Typedefs/itkDiscreteMeanCurvatureQuadEdgeMeshFilter.i, ../../Typedefs/itkDiscreteMinimumCurvatureQuadEdgeMeshFilter.i, ../../Typedefs/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilter.i, ../../Typedefs/itkMatrixCoefficients.i, ../../Typedefs/itkSmoothingQuadEdgeMeshFilter.i, ../../Typedefs/itkBorderQuadEdgeMeshFilterSwigInterface.h, ../../Typedefs/itkCleanQuadEdgeMeshFilterSwigInterface.h, ../../Typedefs/itkDelaunayConformingQuadEdgeMeshFilterSwigInterface.h, ../../Typedefs/itkDiscreteCurvatureQuadEdgeMeshFilterSwigInterface.h, ../../Typedefs/itkDiscreteCurvatureTensorQuadEdgeMeshFilterSwigInterface.h, ../../Typedefs/itkDiscreteGaussianCurvatureQuadEdgeMeshFilterSwigInterface.h, ../../Typedefs/itkDiscreteMaximumCurvatureQuadEdgeMeshFilterSwigInterface.h, ../../Typedefs/itkDiscreteMeanCurvatureQuadEdgeMeshFilterSwigInterface.h, ../../Typedefs/itkDiscreteMinimumCurvatureQuadEdgeMeshFilterSwigInterface.h, ../../Typedefs/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilterSwigInterface.h, ../../Typedefs/itkMatrixCoefficientsSwigInterface.h, ../../Typedefs/itkSmoothingQuadEdgeMeshFilterSwigInterface.h, ../../Typedefs/itkBorderQuadEdgeMeshFilter.idx, ../../Typedefs/itkCleanQuadEdgeMeshFilter.idx, ../../Typedefs/itkDelaunayConformingQuadEdgeMeshFilter.idx, ../../Typedefs/itkDiscreteCurvatureQuadEdgeMeshFilter.idx, ../../Typedefs/itkDiscreteCurvatureTensorQuadEdgeMeshFilter.idx, ../../Typedefs/itkDiscreteGaussianCurvatureQuadEdgeMeshFilter.idx, ../../Typedefs/itkDiscreteMaximumCurvatureQuadEdgeMeshFilter.idx, ../../Typedefs/itkDiscreteMeanCurvatureQuadEdgeMeshFilter.idx, ../../Typedefs/itkDiscreteMinimumCurvatureQuadEdgeMeshFilter.idx, ../../Typedefs/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilter.idx, ../../Typedefs/itkMatrixCoefficients.idx, ../../Typedefs/itkSmoothingQuadEdgeMeshFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryNotImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryNotImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 71%] Generating itkBinaryStatisticsOpeningImageFilterPython.cpp, ../../../lib/itkBinaryStatisticsOpeningImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKQuadEdgeMeshFiltering.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKMesh.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKQuadEdgeMesh.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkBorderQuadEdgeMeshFilter;itkCleanQuadEdgeMeshFilter;itkDelaunayConformingQuadEdgeMeshFilter;itkDiscreteCurvatureQuadEdgeMeshFilter;itkDiscreteCurvatureTensorQuadEdgeMeshFilter;itkDiscreteGaussianCurvatureQuadEdgeMeshFilter;itkDiscreteMaximumCurvatureQuadEdgeMeshFilter;itkDiscreteMeanCurvatureQuadEdgeMeshFilter;itkDiscreteMinimumCurvatureQuadEdgeMeshFilter;itkDiscretePrincipalCurvaturesQuadEdgeMeshFilter;itkMatrixCoefficients;itkSmoothingQuadEdgeMeshFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 72%] Built target ITKQuadEdgeMeshFilteringSwig make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkChangeLabelLabelMapFilterPython.cpp, ../../../lib/itkChangeLabelLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryStatisticsKeepNObjectsImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryStatisticsKeepNObjectsImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkCropLabelMapFilterPython.cpp, ../../../lib/itkCropLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkChangeLabelLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkChangeLabelLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkLabelImageToLabelMapFilterPython.cpp, ../../../lib/itkLabelImageToLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkCropLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCropLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkLabelImageToShapeLabelMapFilterPython.cpp, ../../../lib/itkLabelImageToShapeLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryStatisticsOpeningImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryStatisticsOpeningImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkLabelImageToStatisticsLabelMapFilterPython.cpp, ../../../lib/itkLabelImageToStatisticsLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelImageToLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelImageToLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkLabelMapMaskImageFilterPython.cpp, ../../../lib/itkLabelMapMaskImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelImageToShapeLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelImageToShapeLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkLabelMapToBinaryImageFilterPython.cpp, ../../../lib/itkLabelMapToBinaryImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelImageToStatisticsLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelImageToStatisticsLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkLabelMapToLabelImageFilterPython.cpp, ../../../lib/itkLabelMapToLabelImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelMapMaskImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelMapMaskImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkLabelSelectionLabelMapFilterPython.cpp, ../../../lib/itkLabelSelectionLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelMapToBinaryImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelMapToBinaryImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkLabelShapeKeepNObjectsImageFilterPython.cpp, ../../../lib/itkLabelShapeKeepNObjectsImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelMapToLabelImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelMapToLabelImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkLabelShapeOpeningImageFilterPython.cpp, ../../../lib/itkLabelShapeOpeningImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSmoothing/itkRecursiveGaussianImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRecursiveGaussianImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkSmoothingRecursiveGaussianImageFilterPython.cpp, ../../../lib/itkSmoothingRecursiveGaussianImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelSelectionLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelSelectionLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkLabelStatisticsKeepNObjectsImageFilterPython.cpp, ../../../lib/itkLabelStatisticsKeepNObjectsImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelShapeKeepNObjectsImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelShapeKeepNObjectsImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/c++ -DITKImageFunctionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/ImageFunction/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFunctionPython.dir/itkBSplineInterpolateImageFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkBSplineInterpolateImageFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Building CXX object Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/itkInterpolateImageFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Building CXX object Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/itkBSplineResampleImageFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/c++ -DITKImageFunctionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/ImageFunction/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFunctionPython.dir/itkInterpolateImageFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkInterpolateImageFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Building CXX object Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/itkLinearInterpolateImageFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelShapeOpeningImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelShapeOpeningImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkLabelStatisticsOpeningImageFilterPython.cpp, ../../../lib/itkLabelStatisticsOpeningImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/c++ -DITKImageFunctionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/ImageFunction/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFunctionPython.dir/itkLinearInterpolateImageFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkLinearInterpolateImageFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Building CXX object Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/itkNearestNeighborInterpolateImageFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/c++ -DITKImageFunctionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/ImageFunction/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFunctionPython.dir/itkNearestNeighborInterpolateImageFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkNearestNeighborInterpolateImageFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Building CXX object Wrapping/Modules/ITKImageFunction/CMakeFiles/ITKImageFunctionPython.dir/itkRayCastInterpolateImageFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/c++ -DITKImageFunctionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/ImageFunction/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFunctionPython.dir/itkBSplineResampleImageFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkBSplineResampleImageFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/itkExtractImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkExtractImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating itkLabelUniqueLabelMapFilterPython.cpp, ../../../lib/itkLabelUniqueLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Generating ITKCommonPython.cpp, ../../../lib/ITKCommonPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKCommon/ITKCommonPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKCommon.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKCommon /<>/BUILD/Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommonPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/build.make Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 72%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/ITKCommonPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/ITKCommonPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/ITKCommonPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 72%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkFixedArrayPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/c++ -DITKImageFunctionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/ImageFunction/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFunctionPython.dir/itkRayCastInterpolateImageFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFunction/itkRayCastInterpolateImageFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX shared module ../../../lib/_ITKImageFunctionPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFunction && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageFunctionPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageFunctionPython.so CMakeFiles/ITKImageFunctionPython.dir/ITKImageFunctionPython.cpp.o CMakeFiles/ITKImageFunctionPython.dir/itkImageFunctionBasePython.cpp.o CMakeFiles/ITKImageFunctionPython.dir/itkBSplineDecompositionImageFilterPython.cpp.o CMakeFiles/ITKImageFunctionPython.dir/itkBSplineInterpolateImageFunctionPython.cpp.o CMakeFiles/ITKImageFunctionPython.dir/itkBSplineResampleImageFunctionPython.cpp.o CMakeFiles/ITKImageFunctionPython.dir/itkInterpolateImageFunctionPython.cpp.o CMakeFiles/ITKImageFunctionPython.dir/itkLinearInterpolateImageFunctionPython.cpp.o CMakeFiles/ITKImageFunctionPython.dir/itkNearestNeighborInterpolateImageFunctionPython.cpp.o CMakeFiles/ITKImageFunctionPython.dir/itkRayCastInterpolateImageFunctionPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ITKImageFunctionPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKPython.dir/build.make Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkVTKImageExportPython.cpp, ../../../lib/itkVTKImageExportPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelStatisticsKeepNObjectsImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelStatisticsKeepNObjectsImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkMergeLabelMapFilterPython.cpp, ../../../lib/itkMergeLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageNoise/itkAdditiveGaussianNoiseImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAdditiveGaussianNoiseImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkNoiseBaseImageFilterPython.cpp, ../../../lib/itkNoiseBaseImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKVTK/itkVTKImageExportPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVTKImageExport.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkVTKImageImportPython.cpp, ../../../lib/itkVTKImageImportPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkFixedArrayPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkFixedArrayPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkVectorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelStatisticsOpeningImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelStatisticsOpeningImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkObjectByObjectLabelMapFilterPython.cpp, ../../../lib/itkObjectByObjectLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelUniqueLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelUniqueLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkPadLabelMapFilterPython.cpp, ../../../lib/itkPadLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkVectorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkVectorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkCovariantVectorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKVTK/itkVTKImageImportPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVTKImageImport.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating ITKVTKPython.cpp, ../../../lib/ITKVTKPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKVTK/ITKVTKPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKVTK.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Bridge/VTK/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKVTK /<>/BUILD/Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVTKPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKPython.dir/build.make Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKPython.dir/ITKVTKPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKVTK && /usr/bin/c++ -DITKVTKPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Bridge/VTK/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKVTKPython.dir/ITKVTKPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKVTK/ITKVTKPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKPython.dir/itkVTKImageExportPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkMergeLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMergeLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkRegionFromReferenceLabelMapFilterPython.cpp, ../../../lib/itkRegionFromReferenceLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKVTK && /usr/bin/c++ -DITKVTKPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Bridge/VTK/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKVTKPython.dir/itkVTKImageExportPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKVTK/itkVTKImageExportPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKVTK/CMakeFiles/ITKVTKPython.dir/itkVTKImageImportPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkPadLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPadLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkCovariantVectorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkCovariantVectorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkPointPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkTriangleHelperPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkTriangleHelperPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkTriangleHelperPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkVariableSizeMatrixPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkVariableSizeMatrixPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkVariableSizeMatrixPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkVersorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkVersorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkVersorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/stdcomplexPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/stdcomplexPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/stdcomplexPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_c_vectorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkRegionFromReferenceLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRegionFromReferenceLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkRelabelLabelMapFilterPython.cpp, ../../../lib/itkRelabelLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_c_vectorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_c_vectorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_cost_functionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkPointPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkPointPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_diag_matrixPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_cost_functionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_cost_functionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_file_matrixPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKVTK && /usr/bin/c++ -DITKVTKPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Bridge/VTK/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKVTKPython.dir/itkVTKImageImportPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKVTK/itkVTKImageImportPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX shared module ../../../lib/_ITKVTKPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKVTK && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVTKPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKVTKPython.so CMakeFiles/ITKVTKPython.dir/ITKVTKPython.cpp.o CMakeFiles/ITKVTKPython.dir/itkVTKImageExportPython.cpp.o CMakeFiles/ITKVTKPython.dir/itkVTKImageImportPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ITKVTKPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiSwig.dir/build.make Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Voronoi/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKVoronoi /<>/BUILD/Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVoronoiSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiSwig.dir/build.make Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Generating ../../Typedefs/itkVoronoiSegmentationImageFilter.i, ../../Typedefs/itkVoronoiSegmentationImageFilterSwigInterface.h, ../../Typedefs/itkVoronoiSegmentationImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_file_matrixPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_file_matrixPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_file_vectorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKVoronoi && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKVoronoi.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFilterBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKMesh.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkVoronoiSegmentationImageFilter make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ITKVoronoiSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsPython.dir/build.make Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkPyCommandPython.cpp, ../../../../lib/itkPyCommandPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_diag_matrixPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_diag_matrixPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_fortran_copyPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_file_vectorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_file_vectorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_least_squares_functionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_fortran_copyPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_fortran_copyPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_matrix_fixedPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Generators/Python/PyUtils/itkPyCommandPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPyCommand.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkPyImageFilterPython.cpp, ../../../../lib/itkPyImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_least_squares_functionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_least_squares_functionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_matrix_fixed_refPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkObjectByObjectLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkObjectByObjectLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkShapeKeepNObjectsLabelMapFilterPython.cpp, ../../../lib/itkShapeKeepNObjectsLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_matrix_fixed_refPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_matrix_fixed_refPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_matrix_refPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_matrix_refPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_matrix_refPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_vector_refPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_vector_refPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_vector_refPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_matrixPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_matrix_fixedPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_matrix_fixedPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_vectorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkRelabelLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRelabelLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkShapeLabelMapFilterPython.cpp, ../../../lib/itkShapeLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeKeepNObjectsLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShapeKeepNObjectsLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_matrixPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_matrixPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkShapeOpeningLabelMapFilterPython.cpp, ../../../lib/itkShapeOpeningLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/vnl_unary_functionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_unary_functionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_unary_functionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/ITKCommonBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/vnl_vectorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/vnl_vectorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkSizePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkSizePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkSizePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkOffsetPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Generators/Python/PyUtils/itkPyImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPyImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating ITKPyUtilsPython.cpp, ../../../../lib/ITKPyUtilsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Generators/Python/PyUtils/ITKPyUtilsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKPyUtils.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Wrapping/Generators/Python/PyUtils /<>/BUILD /<>/BUILD/Wrapping/Generators/Python/PyUtils /<>/BUILD/Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPyUtilsPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsPython.dir/build.make Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsPython.dir/ITKPyUtilsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkOffsetPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkOffsetPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/c++ -DITKImageSourcesPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageSources/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageSourcesPython.dir/itkGaussianImageSourcePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageSources/itkGaussianImageSourcePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesPython.dir/itkGenerateImageSourcePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesPython.dir/itkGridImageSourcePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python/PyUtils && /usr/bin/c++ -DITKPyUtilsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Wrapping/Generators/Python/PyUtils -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPyUtilsPython.dir/ITKPyUtilsPython.cpp.o -c /<>/BUILD/Wrapping/Generators/Python/PyUtils/ITKPyUtilsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsPython.dir/itkPyCommandPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python/PyUtils && /usr/bin/c++ -DITKPyUtilsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Wrapping/Generators/Python/PyUtils -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPyUtilsPython.dir/itkPyCommandPython.cpp.o -c /<>/BUILD/Wrapping/Generators/Python/PyUtils/itkPyCommandPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsPython.dir/itkPyImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShapeLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkShapePositionLabelMapFilterPython.cpp, ../../../lib/itkShapePositionLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/ITKCommonBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/ITKCommonBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkArrayPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python/PyUtils && /usr/bin/c++ -DITKPyUtilsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Wrapping/Generators/Python/PyUtils -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPyUtilsPython.dir/itkPyImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Generators/Python/PyUtils/itkPyImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Generators/Python/PyUtils/CMakeFiles/ITKPyUtilsPython.dir/itkPyCommand.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkArrayPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkArrayPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkIndexPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python/PyUtils && /usr/bin/c++ -DITKPyUtilsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Wrapping/Generators/Python/PyUtils -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPyUtilsPython.dir/itkPyCommand.cxx.o -c /<>/Wrapping/Generators/Python/PyUtils/itkPyCommand.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX shared module ../../../../lib/_ITKPyUtilsPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Generators/Python/PyUtils && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKPyUtilsPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../../lib/_ITKPyUtilsPython.so CMakeFiles/ITKPyUtilsPython.dir/ITKPyUtilsPython.cpp.o CMakeFiles/ITKPyUtilsPython.dir/itkPyCommandPython.cpp.o CMakeFiles/ITKPyUtilsPython.dir/itkPyImageFilterPython.cpp.o CMakeFiles/ITKPyUtilsPython.dir/itkPyCommand.cxx.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../../lib/libITKDeprecated-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../../lib/libITKIOCSV-4.12.so.1 ../../../../lib/libITKIOHDF5-4.12.so.1 ../../../../lib/libITKIOMRC-4.12.so.1 ../../../../lib/libITKOptimizersv4-4.12.so.1 ../../../../lib/libITKReview-4.12.so.1 ../../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../../lib/libITKDICOMParser-4.12.so.1 ../../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKNrrdIO-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKPolynomials-4.12.so.1 ../../../../lib/libITKBiasCorrection-4.12.so.1 ../../../../lib/libITKBioCell-4.12.so.1 ../../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../../lib/libITKIOXML-4.12.so.1 ../../../../lib/libITKFEM-4.12.so.1 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKOptimizers-4.12.so.1 ../../../../lib/libITKIOGE-4.12.so.1 ../../../../lib/libITKIOSiemens-4.12.so.1 ../../../../lib/libITKIOIPL-4.12.so.1 ../../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../../lib/libITKVTK-4.12.so.1 ../../../../lib/libITKWatersheds-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libitkopenjpeg-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKVideoCore-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ITKPyUtilsPython make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/NeighborhoodIterators3.dir/build.make Examples/Iterators/CMakeFiles/NeighborhoodIterators3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/NeighborhoodIterators3.dir/DependInfo.cmake --color= Scanning dependencies of target NeighborhoodIterators3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/NeighborhoodIterators3.dir/build.make Examples/Iterators/CMakeFiles/NeighborhoodIterators3.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/NeighborhoodIterators3.dir/NeighborhoodIterators3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkIndexPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkIndexPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkContinuousIndexPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkContinuousIndexPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkContinuousIndexPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkMatrixPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/NeighborhoodIterators3.dir/NeighborhoodIterators3.cxx.o -c /<>/Examples/Iterators/NeighborhoodIterators3.cxx In file included from /<>/Examples/Iterators/NeighborhoodIterators3.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/NeighborhoodIterators3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/NeighborhoodIterators3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/NeighborhoodIterators3.dir/NeighborhoodIterators3.cxx.o -o ../../bin/NeighborhoodIterators3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target NeighborhoodIterators3 make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkShapeRelabelImageFilterPython.cpp, ../../../lib/itkShapeRelabelImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/c++ -DITKImageSourcesPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageSources/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageSourcesPython.dir/itkGridImageSourcePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageSources/itkGridImageSourcePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesPython.dir/itkParametricImageSourcePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeOpeningLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShapeOpeningLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKImageSources/CMakeFiles/ITKImageSourcesPython.dir/itkPhysicalPointImageSourcePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/c++ -DITKImageSourcesPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageSources/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageSourcesPython.dir/itkGenerateImageSourcePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageSources/itkGenerateImageSourcePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkShapeRelabelLabelMapFilterPython.cpp, ../../../lib/itkShapeRelabelLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/c++ -DITKImageSourcesPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageSources/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageSourcesPython.dir/itkParametricImageSourcePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageSources/itkParametricImageSourcePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkShapeUniqueLabelMapFilterPython.cpp, ../../../lib/itkShapeUniqueLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSmoothing/itkSmoothingRecursiveGaussianImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSmoothingRecursiveGaussianImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating ITKSmoothingPython.cpp, ../../../lib/ITKSmoothingPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSmoothing/ITKSmoothingPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKSmoothing.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Smoothing/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKSmoothing /<>/BUILD/Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSmoothingPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingPython.dir/build.make Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingPython.dir/ITKSmoothingPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/c++ -DITKSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Smoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSmoothingPython.dir/ITKSmoothingPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSmoothing/ITKSmoothingPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingPython.dir/itkBinomialBlurImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapePositionLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShapePositionLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkShiftScaleLabelMapFilterPython.cpp, ../../../lib/itkShiftScaleLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkMatrixPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkMatrixPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkVectorContainerPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/c++ -DITKSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Smoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSmoothingPython.dir/itkBinomialBlurImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSmoothing/itkBinomialBlurImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingPython.dir/itkDiscreteGaussianImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkVectorContainerPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkVectorContainerPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkMapContainerPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeRelabelLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShapeRelabelLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkStatisticsKeepNObjectsLabelMapFilterPython.cpp, ../../../lib/itkStatisticsKeepNObjectsLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/c++ -DITKImageSourcesPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageSources/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageSourcesPython.dir/itkPhysicalPointImageSourcePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageSources/itkPhysicalPointImageSourcePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX shared module ../../../lib/_ITKImageSourcesPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageSources && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageSourcesPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageSourcesPython.so CMakeFiles/ITKImageSourcesPython.dir/ITKImageSourcesPython.cpp.o CMakeFiles/ITKImageSourcesPython.dir/itkGaborImageSourcePython.cpp.o CMakeFiles/ITKImageSourcesPython.dir/itkGaussianImageSourcePython.cpp.o CMakeFiles/ITKImageSourcesPython.dir/itkGenerateImageSourcePython.cpp.o CMakeFiles/ITKImageSourcesPython.dir/itkGridImageSourcePython.cpp.o CMakeFiles/ITKImageSourcesPython.dir/itkParametricImageSourcePython.cpp.o CMakeFiles/ITKImageSourcesPython.dir/itkPhysicalPointImageSourcePython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ITKImageSourcesPython make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/NeighborhoodIterators2.dir/build.make Examples/Iterators/CMakeFiles/NeighborhoodIterators2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/NeighborhoodIterators2.dir/DependInfo.cmake --color= Scanning dependencies of target NeighborhoodIterators2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/NeighborhoodIterators2.dir/build.make Examples/Iterators/CMakeFiles/NeighborhoodIterators2.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/NeighborhoodIterators2.dir/NeighborhoodIterators2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeRelabelImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShapeRelabelImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeUniqueLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShapeUniqueLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkStatisticsLabelMapFilterPython.cpp, ../../../lib/itkStatisticsLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkStatisticsOpeningLabelMapFilterPython.cpp, ../../../lib/itkStatisticsOpeningLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkMapContainerPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkMapContainerPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkBoundingBoxPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/NeighborhoodIterators2.dir/NeighborhoodIterators2.cxx.o -c /<>/Examples/Iterators/NeighborhoodIterators2.cxx In file included from /<>/Examples/Iterators/NeighborhoodIterators2.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/NeighborhoodIterators2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/NeighborhoodIterators2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/NeighborhoodIterators2.dir/NeighborhoodIterators2.cxx.o -o ../../bin/NeighborhoodIterators2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target NeighborhoodIterators2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ImageRandomConstIteratorWithIndex.dir/build.make Examples/Iterators/CMakeFiles/ImageRandomConstIteratorWithIndex.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/ImageRandomConstIteratorWithIndex.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRandomConstIteratorWithIndex make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ImageRandomConstIteratorWithIndex.dir/build.make Examples/Iterators/CMakeFiles/ImageRandomConstIteratorWithIndex.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/ImageRandomConstIteratorWithIndex.dir/ImageRandomConstIteratorWithIndex.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShiftScaleLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShiftScaleLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkStatisticsPositionLabelMapFilterPython.cpp, ../../../lib/itkStatisticsPositionLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRandomConstIteratorWithIndex.dir/ImageRandomConstIteratorWithIndex.cxx.o -c /<>/Examples/Iterators/ImageRandomConstIteratorWithIndex.cxx In file included from /<>/Examples/Iterators/ImageRandomConstIteratorWithIndex.cxx:46: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/ImageRandomConstIteratorWithIndex make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRandomConstIteratorWithIndex.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRandomConstIteratorWithIndex.dir/ImageRandomConstIteratorWithIndex.cxx.o -o ../../bin/ImageRandomConstIteratorWithIndex -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ImageRandomConstIteratorWithIndex make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ImageLinearIteratorWithIndex2.dir/build.make Examples/Iterators/CMakeFiles/ImageLinearIteratorWithIndex2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/ImageLinearIteratorWithIndex2.dir/DependInfo.cmake --color= Scanning dependencies of target ImageLinearIteratorWithIndex2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ImageLinearIteratorWithIndex2.dir/build.make Examples/Iterators/CMakeFiles/ImageLinearIteratorWithIndex2.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/ImageLinearIteratorWithIndex2.dir/ImageLinearIteratorWithIndex2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkBoundingBoxPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkBoundingBoxPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkRGBPixelPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageLinearIteratorWithIndex2.dir/ImageLinearIteratorWithIndex2.cxx.o -c /<>/Examples/Iterators/ImageLinearIteratorWithIndex2.cxx In file included from /<>/Examples/Iterators/ImageLinearIteratorWithIndex2.cxx:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/ImageLinearIteratorWithIndex2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageLinearIteratorWithIndex2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageLinearIteratorWithIndex2.dir/ImageLinearIteratorWithIndex2.cxx.o -o ../../bin/ImageLinearIteratorWithIndex2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ImageLinearIteratorWithIndex2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/NeighborhoodIterators4.dir/build.make Examples/Iterators/CMakeFiles/NeighborhoodIterators4.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/NeighborhoodIterators4.dir/DependInfo.cmake --color= Scanning dependencies of target NeighborhoodIterators4 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/NeighborhoodIterators4.dir/build.make Examples/Iterators/CMakeFiles/NeighborhoodIterators4.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/NeighborhoodIterators4.dir/NeighborhoodIterators4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkRGBPixelPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkRGBPixelPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkRGBAPixelPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkRGBAPixelPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkRGBAPixelPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkVariableLengthVectorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/NeighborhoodIterators4.dir/NeighborhoodIterators4.cxx.o -c /<>/Examples/Iterators/NeighborhoodIterators4.cxx In file included from /<>/Examples/Iterators/NeighborhoodIterators4.cxx:40: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/NeighborhoodIterators4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/NeighborhoodIterators4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/NeighborhoodIterators4.dir/NeighborhoodIterators4.cxx.o -o ../../bin/NeighborhoodIterators4 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target NeighborhoodIterators4 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ImageRegionIteratorWithIndex.dir/build.make Examples/Iterators/CMakeFiles/ImageRegionIteratorWithIndex.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/ImageRegionIteratorWithIndex.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegionIteratorWithIndex make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ImageRegionIteratorWithIndex.dir/build.make Examples/Iterators/CMakeFiles/ImageRegionIteratorWithIndex.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/ImageRegionIteratorWithIndex.dir/ImageRegionIteratorWithIndex.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkVariableLengthVectorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkVariableLengthVectorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkImageRegionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageNoise/itkNoiseBaseImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNoiseBaseImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkSaltAndPepperNoiseImageFilterPython.cpp, ../../../lib/itkSaltAndPepperNoiseImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegionIteratorWithIndex.dir/ImageRegionIteratorWithIndex.cxx.o -c /<>/Examples/Iterators/ImageRegionIteratorWithIndex.cxx In file included from /<>/Examples/Iterators/ImageRegionIteratorWithIndex.cxx:47: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/ImageRegionIteratorWithIndex make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegionIteratorWithIndex.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegionIteratorWithIndex.dir/ImageRegionIteratorWithIndex.cxx.o -o ../../bin/ImageRegionIteratorWithIndex -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ImageRegionIteratorWithIndex make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ImageLinearIteratorWithIndex.dir/build.make Examples/Iterators/CMakeFiles/ImageLinearIteratorWithIndex.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/ImageLinearIteratorWithIndex.dir/DependInfo.cmake --color= Scanning dependencies of target ImageLinearIteratorWithIndex make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ImageLinearIteratorWithIndex.dir/build.make Examples/Iterators/CMakeFiles/ImageLinearIteratorWithIndex.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/ImageLinearIteratorWithIndex.dir/ImageLinearIteratorWithIndex.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsKeepNObjectsLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStatisticsKeepNObjectsLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkStatisticsRelabelImageFilterPython.cpp, ../../../lib/itkStatisticsRelabelImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsOpeningLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStatisticsOpeningLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkStatisticsRelabelLabelMapFilterPython.cpp, ../../../lib/itkStatisticsRelabelLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkImageRegionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageRegionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkSymmetricSecondRankTensorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStatisticsLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkStatisticsUniqueLabelMapFilterPython.cpp, ../../../lib/itkStatisticsUniqueLabelMapFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageLinearIteratorWithIndex.dir/ImageLinearIteratorWithIndex.cxx.o -c /<>/Examples/Iterators/ImageLinearIteratorWithIndex.cxx In file included from /<>/Examples/Iterators/ImageLinearIteratorWithIndex.cxx:100: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/ImageLinearIteratorWithIndex make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageLinearIteratorWithIndex.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageLinearIteratorWithIndex.dir/ImageLinearIteratorWithIndex.cxx.o -o ../../bin/ImageLinearIteratorWithIndex -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ImageLinearIteratorWithIndex make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ImageRegionIterator.dir/build.make Examples/Iterators/CMakeFiles/ImageRegionIterator.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/ImageRegionIterator.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegionIterator make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ImageRegionIterator.dir/build.make Examples/Iterators/CMakeFiles/ImageRegionIterator.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/ImageRegionIterator.dir/ImageRegionIterator.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/c++ -DITKSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Smoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSmoothingPython.dir/itkDiscreteGaussianImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSmoothing/itkDiscreteGaussianImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingPython.dir/itkMeanImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkSymmetricSecondRankTensorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkSymmetricSecondRankTensorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkImagePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegionIterator.dir/ImageRegionIterator.cxx.o -c /<>/Examples/Iterators/ImageRegionIterator.cxx In file included from /<>/Examples/Iterators/ImageRegionIterator.cxx:47: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/ImageRegionIterator make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegionIterator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegionIterator.dir/ImageRegionIterator.cxx.o -o ../../bin/ImageRegionIterator -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ImageRegionIterator make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/NeighborhoodIterators6.dir/build.make Examples/Iterators/CMakeFiles/NeighborhoodIterators6.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/NeighborhoodIterators6.dir/DependInfo.cmake --color= Scanning dependencies of target NeighborhoodIterators6 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/NeighborhoodIterators6.dir/build.make Examples/Iterators/CMakeFiles/NeighborhoodIterators6.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/NeighborhoodIterators6.dir/NeighborhoodIterators6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsPositionLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStatisticsPositionLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ShapedNeighborhoodIterators1.dir/build.make Examples/Iterators/CMakeFiles/ShapedNeighborhoodIterators1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/ShapedNeighborhoodIterators1.dir/DependInfo.cmake --color= Scanning dependencies of target ShapedNeighborhoodIterators1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ShapedNeighborhoodIterators1.dir/build.make Examples/Iterators/CMakeFiles/ShapedNeighborhoodIterators1.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/ShapedNeighborhoodIterators1.dir/ShapedNeighborhoodIterators1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/NeighborhoodIterators6.dir/NeighborhoodIterators6.cxx.o -c /<>/Examples/Iterators/NeighborhoodIterators6.cxx In file included from /<>/Examples/Iterators/NeighborhoodIterators6.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/NeighborhoodIterators6 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ShapedNeighborhoodIterators1.dir/ShapedNeighborhoodIterators1.cxx.o -c /<>/Examples/Iterators/ShapedNeighborhoodIterators1.cxx In file included from /<>/Examples/Iterators/ShapedNeighborhoodIterators1.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/ShapedNeighborhoodIterators1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/NeighborhoodIterators6.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/NeighborhoodIterators6.dir/NeighborhoodIterators6.cxx.o -o ../../bin/NeighborhoodIterators6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target NeighborhoodIterators6 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/NeighborhoodIterators1.dir/build.make Examples/Iterators/CMakeFiles/NeighborhoodIterators1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShapedNeighborhoodIterators1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ShapedNeighborhoodIterators1.dir/ShapedNeighborhoodIterators1.cxx.o -o ../../bin/ShapedNeighborhoodIterators1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ShapedNeighborhoodIterators1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/NeighborhoodIterators5.dir/build.make Examples/Iterators/CMakeFiles/NeighborhoodIterators5.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/NeighborhoodIterators1.dir/DependInfo.cmake --color= Scanning dependencies of target NeighborhoodIterators1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/NeighborhoodIterators1.dir/build.make Examples/Iterators/CMakeFiles/NeighborhoodIterators1.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/NeighborhoodIterators1.dir/NeighborhoodIterators1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/NeighborhoodIterators5.dir/DependInfo.cmake --color= Scanning dependencies of target NeighborhoodIterators5 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/NeighborhoodIterators5.dir/build.make Examples/Iterators/CMakeFiles/NeighborhoodIterators5.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/NeighborhoodIterators5.dir/NeighborhoodIterators5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/NeighborhoodIterators1.dir/NeighborhoodIterators1.cxx.o -c /<>/Examples/Iterators/NeighborhoodIterators1.cxx In file included from /<>/Examples/Iterators/NeighborhoodIterators1.cxx:42: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/NeighborhoodIterators1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/NeighborhoodIterators5.dir/NeighborhoodIterators5.cxx.o -c /<>/Examples/Iterators/NeighborhoodIterators5.cxx In file included from /<>/Examples/Iterators/NeighborhoodIterators5.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/NeighborhoodIterators5 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/NeighborhoodIterators1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/NeighborhoodIterators1.dir/NeighborhoodIterators1.cxx.o -o ../../bin/NeighborhoodIterators1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/NeighborhoodIterators5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/NeighborhoodIterators5.dir/NeighborhoodIterators5.cxx.o -o ../../bin/NeighborhoodIterators5 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target NeighborhoodIterators1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ImageSliceIteratorWithIndex.dir/build.make Examples/Iterators/CMakeFiles/ImageSliceIteratorWithIndex.dir/depend make[2]: Entering directory '/<>/BUILD' [ 73%] Built target NeighborhoodIterators5 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ShapedNeighborhoodIterators2.dir/build.make Examples/Iterators/CMakeFiles/ShapedNeighborhoodIterators2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/ImageSliceIteratorWithIndex.dir/DependInfo.cmake --color= Scanning dependencies of target ImageSliceIteratorWithIndex make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ImageSliceIteratorWithIndex.dir/build.make Examples/Iterators/CMakeFiles/ImageSliceIteratorWithIndex.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Iterators /<>/BUILD /<>/BUILD/Examples/Iterators /<>/BUILD/Examples/Iterators/CMakeFiles/ShapedNeighborhoodIterators2.dir/DependInfo.cmake --color= Scanning dependencies of target ShapedNeighborhoodIterators2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Iterators/CMakeFiles/ShapedNeighborhoodIterators2.dir/build.make Examples/Iterators/CMakeFiles/ShapedNeighborhoodIterators2.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/ImageSliceIteratorWithIndex.dir/ImageSliceIteratorWithIndex.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/Iterators/CMakeFiles/ShapedNeighborhoodIterators2.dir/ShapedNeighborhoodIterators2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/c++ -DITKSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Smoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSmoothingPython.dir/itkMeanImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSmoothing/itkMeanImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingPython.dir/itkMedianImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageSliceIteratorWithIndex.dir/ImageSliceIteratorWithIndex.cxx.o -c /<>/Examples/Iterators/ImageSliceIteratorWithIndex.cxx In file included from /<>/Examples/Iterators/ImageSliceIteratorWithIndex.cxx:98: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/ImageSliceIteratorWithIndex make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageSliceIteratorWithIndex.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageSliceIteratorWithIndex.dir/ImageSliceIteratorWithIndex.cxx.o -o ../../bin/ImageSliceIteratorWithIndex -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ImageSliceIteratorWithIndex make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Containers/CMakeFiles/TreeContainer.dir/build.make Examples/DataRepresentation/Containers/CMakeFiles/TreeContainer.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ShapedNeighborhoodIterators2.dir/ShapedNeighborhoodIterators2.cxx.o -c /<>/Examples/Iterators/ShapedNeighborhoodIterators2.cxx In file included from /<>/Examples/Iterators/ShapedNeighborhoodIterators2.cxx:25: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../bin/ShapedNeighborhoodIterators2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Containers /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Containers /<>/BUILD/Examples/DataRepresentation/Containers/CMakeFiles/TreeContainer.dir/DependInfo.cmake --color= Scanning dependencies of target TreeContainer make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Containers/CMakeFiles/TreeContainer.dir/build.make Examples/DataRepresentation/Containers/CMakeFiles/TreeContainer.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Containers/CMakeFiles/TreeContainer.dir/TreeContainer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Iterators && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShapedNeighborhoodIterators2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ShapedNeighborhoodIterators2.dir/ShapedNeighborhoodIterators2.cxx.o -o ../../bin/ShapedNeighborhoodIterators2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ShapedNeighborhoodIterators2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor2.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Image /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Image /<>/BUILD/Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor2.dir/DependInfo.cmake --color= Scanning dependencies of target ImageAdaptor2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor2.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor2.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor2.dir/ImageAdaptor2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Containers && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/TreeContainer.dir/TreeContainer.cxx.o -c /<>/Examples/DataRepresentation/Containers/TreeContainer.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/TreeContainer make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Containers && /usr/bin/cmake -E cmake_link_script CMakeFiles/TreeContainer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/TreeContainer.dir/TreeContainer.cxx.o -o ../../../bin/TreeContainer -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target TreeContainer make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/VectorImage.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/VectorImage.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Image /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Image /<>/BUILD/Examples/DataRepresentation/Image/CMakeFiles/VectorImage.dir/DependInfo.cmake --color= Scanning dependencies of target VectorImage make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/VectorImage.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/VectorImage.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Image/CMakeFiles/VectorImage.dir/VectorImage.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/VectorImage.dir/VectorImage.cxx.o -c /<>/Examples/DataRepresentation/Image/VectorImage.cxx In file included from /<>/Examples/DataRepresentation/Image/VectorImage.cxx:46: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/VectorImage make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/cmake -E cmake_link_script CMakeFiles/VectorImage.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/VectorImage.dir/VectorImage.cxx.o -o ../../../bin/VectorImage -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target VectorImage make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingPython.dir/itkRecursiveGaussianImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsUniqueLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStatisticsUniqueLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor4.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor4.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Image /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Image /<>/BUILD/Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor4.dir/DependInfo.cmake --color= Scanning dependencies of target ImageAdaptor4 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor4.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor4.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor4.dir/ImageAdaptor4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageAdaptor2.dir/ImageAdaptor2.cxx.o -c /<>/Examples/DataRepresentation/Image/ImageAdaptor2.cxx In file included from /<>/Examples/DataRepresentation/Image/ImageAdaptor2.cxx:32: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/ImageAdaptor2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageAdaptor2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageAdaptor2.dir/ImageAdaptor2.cxx.o -o ../../../bin/ImageAdaptor2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ImageAdaptor2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/Image3.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/Image3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Image /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Image /<>/BUILD/Examples/DataRepresentation/Image/CMakeFiles/Image3.dir/DependInfo.cmake --color= Scanning dependencies of target Image3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/Image3.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/Image3.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Image/CMakeFiles/Image3.dir/Image3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/Image3.dir/Image3.cxx.o -c /<>/Examples/DataRepresentation/Image/Image3.cxx In file included from /<>/Examples/DataRepresentation/Image/Image3.cxx:34: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/Image3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/cmake -E cmake_link_script CMakeFiles/Image3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/Image3.dir/Image3.cxx.o -o ../../../bin/Image3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target Image3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor1.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Image /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Image /<>/BUILD/Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor1.dir/DependInfo.cmake --color= Scanning dependencies of target ImageAdaptor1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor1.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor1.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor1.dir/ImageAdaptor1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageAdaptor4.dir/ImageAdaptor4.cxx.o -c /<>/Examples/DataRepresentation/Image/ImageAdaptor4.cxx In file included from /<>/Examples/DataRepresentation/Image/ImageAdaptor4.cxx:45: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/ImageAdaptor4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageAdaptor4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageAdaptor4.dir/ImageAdaptor4.cxx.o -o ../../../bin/ImageAdaptor4 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ImageAdaptor4 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/RGBImage.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/RGBImage.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Image /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Image /<>/BUILD/Examples/DataRepresentation/Image/CMakeFiles/RGBImage.dir/DependInfo.cmake --color= Scanning dependencies of target RGBImage make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/RGBImage.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/RGBImage.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Image/CMakeFiles/RGBImage.dir/RGBImage.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageAdaptor1.dir/ImageAdaptor1.cxx.o -c /<>/Examples/DataRepresentation/Image/ImageAdaptor1.cxx In file included from /<>/Examples/DataRepresentation/Image/ImageAdaptor1.cxx:34: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/ImageAdaptor1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageAdaptor1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageAdaptor1.dir/ImageAdaptor1.cxx.o -o ../../../bin/ImageAdaptor1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ImageAdaptor1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/Image1.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/Image1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Image /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Image /<>/BUILD/Examples/DataRepresentation/Image/CMakeFiles/Image1.dir/DependInfo.cmake --color= Scanning dependencies of target Image1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/Image1.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/Image1.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Image/CMakeFiles/Image1.dir/Image1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/RGBImage.dir/RGBImage.cxx.o -c /<>/Examples/DataRepresentation/Image/RGBImage.cxx In file included from /<>/Examples/DataRepresentation/Image/RGBImage.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/RGBImage make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/Image1.dir/Image1.cxx.o -c /<>/Examples/DataRepresentation/Image/Image1.cxx In file included from /<>/Examples/DataRepresentation/Image/Image1.cxx:33: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/Image1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGBImage.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/RGBImage.dir/RGBImage.cxx.o -o ../../../bin/RGBImage -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target RGBImage make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/Image4.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/Image4.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/cmake -E cmake_link_script CMakeFiles/Image1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/Image1.dir/Image1.cxx.o -o ../../../bin/Image1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Image /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Image /<>/BUILD/Examples/DataRepresentation/Image/CMakeFiles/Image4.dir/DependInfo.cmake --color= Scanning dependencies of target Image4 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/Image4.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/Image4.dir/build make[2]: Entering directory '/<>/BUILD' [ 73%] Built target Image1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/Image2.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/Image2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Image/CMakeFiles/Image4.dir/Image4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Image /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Image /<>/BUILD/Examples/DataRepresentation/Image/CMakeFiles/Image2.dir/DependInfo.cmake --color= Scanning dependencies of target Image2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/Image2.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/Image2.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Image/CMakeFiles/Image2.dir/Image2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/Image4.dir/Image4.cxx.o -c /<>/Examples/DataRepresentation/Image/Image4.cxx In file included from /<>/Examples/DataRepresentation/Image/Image4.cxx:67: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/Image4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/cmake -E cmake_link_script CMakeFiles/Image4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/Image4.dir/Image4.cxx.o -o ../../../bin/Image4 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target Image4 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor3.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Image /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Image /<>/BUILD/Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor3.dir/DependInfo.cmake --color= Scanning dependencies of target ImageAdaptor3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor3.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor3.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Image/CMakeFiles/ImageAdaptor3.dir/ImageAdaptor3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkImagePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkImagePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkVectorImagePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/Image2.dir/Image2.cxx.o -c /<>/Examples/DataRepresentation/Image/Image2.cxx In file included from /<>/Examples/DataRepresentation/Image/Image2.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/Image2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/cmake -E cmake_link_script CMakeFiles/Image2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/Image2.dir/Image2.cxx.o -o ../../../bin/Image2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target Image2 make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKSmoothing/CMakeFiles/ITKSmoothingPython.dir/itkSmoothingRecursiveGaussianImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/c++ -DITKSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Smoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSmoothingPython.dir/itkMedianImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSmoothing/itkMedianImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsRelabelImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStatisticsRelabelImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsRelabelLabelMapFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStatisticsRelabelLabelMapFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkShotNoiseImageFilterPython.cpp, ../../../lib/itkShotNoiseImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating itkSpeckleNoiseImageFilterPython.cpp, ../../../lib/itkSpeckleNoiseImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageAdaptor3.dir/ImageAdaptor3.cxx.o -c /<>/Examples/DataRepresentation/Image/ImageAdaptor3.cxx In file included from /<>/Examples/DataRepresentation/Image/ImageAdaptor3.cxx:37: In file included from /<>/Modules/Core/ImageAdaptors/include/itkImageAdaptor.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/ImageAdaptor3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageAdaptor3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageAdaptor3.dir/ImageAdaptor3.cxx.o -o ../../../bin/ImageAdaptor3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ImageAdaptor3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/Image5.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/Image5.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Image /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Image /<>/BUILD/Examples/DataRepresentation/Image/CMakeFiles/Image5.dir/DependInfo.cmake --color= Scanning dependencies of target Image5 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Image/CMakeFiles/Image5.dir/build.make Examples/DataRepresentation/Image/CMakeFiles/Image5.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Image/CMakeFiles/Image5.dir/Image5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/Image5.dir/Image5.cxx.o -c /<>/Examples/DataRepresentation/Image/Image5.cxx In file included from /<>/Examples/DataRepresentation/Image/Image5.cxx:42: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/Image5 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/c++ -DITKSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Smoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSmoothingPython.dir/itkRecursiveGaussianImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSmoothing/itkRecursiveGaussianImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/PointSetWithVectors.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/PointSetWithVectors.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Image && /usr/bin/cmake -E cmake_link_script CMakeFiles/Image5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/Image5.dir/Image5.cxx.o -o ../../../bin/Image5 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target Image5 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/Mesh1.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/Mesh1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/PointSetWithVectors.dir/DependInfo.cmake --color= Scanning dependencies of target PointSetWithVectors make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/PointSetWithVectors.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/PointSetWithVectors.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/Mesh1.dir/DependInfo.cmake --color= Scanning dependencies of target Mesh1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/PointSetWithVectors.dir/PointSetWithVectors.cxx.o make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/Mesh1.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/Mesh1.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/Mesh1.dir/Mesh1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkVectorImagePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkVectorImagePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkNeighborhoodPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/PointSetWithVectors.dir/PointSetWithVectors.cxx.o -c /<>/Examples/DataRepresentation/Mesh/PointSetWithVectors.cxx In file included from /<>/Examples/DataRepresentation/Mesh/PointSetWithVectors.cxx:38: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/PointSetWithVectors make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/PointSetWithVectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/PointSetWithVectors.dir/PointSetWithVectors.cxx.o -o ../../../bin/PointSetWithVectors -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target PointSetWithVectors make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/PointSet3.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/PointSet3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/PointSet3.dir/DependInfo.cmake --color= Scanning dependencies of target PointSet3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/PointSet3.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/PointSet3.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/PointSet3.dir/PointSet3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/Mesh1.dir/Mesh1.cxx.o -c /<>/Examples/DataRepresentation/Mesh/Mesh1.cxx In file included from /<>/Examples/DataRepresentation/Mesh/Mesh1.cxx:51: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/Mesh1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/Mesh1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/Mesh1.dir/Mesh1.cxx.o -o ../../../bin/Mesh1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target Mesh1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/PointSetWithCovariantVectors.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/PointSetWithCovariantVectors.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/PointSetWithCovariantVectors.dir/DependInfo.cmake --color= Scanning dependencies of target PointSetWithCovariantVectors make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/PointSetWithCovariantVectors.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/PointSetWithCovariantVectors.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/PointSetWithCovariantVectors.dir/PointSetWithCovariantVectors.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/PointSet3.dir/PointSet3.cxx.o -c /<>/Examples/DataRepresentation/Mesh/PointSet3.cxx In file included from /<>/Examples/DataRepresentation/Mesh/PointSet3.cxx:35: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/PointSet3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/PointSet3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/PointSet3.dir/PointSet3.cxx.o -o ../../../bin/PointSet3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target PointSet3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellVisitor2.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellVisitor2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellVisitor2.dir/DependInfo.cmake --color= Scanning dependencies of target MeshCellVisitor2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellVisitor2.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellVisitor2.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellVisitor2.dir/MeshCellVisitor2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/PointSetWithCovariantVectors.dir/PointSetWithCovariantVectors.cxx.o -c /<>/Examples/DataRepresentation/Mesh/PointSetWithCovariantVectors.cxx In file included from /<>/Examples/DataRepresentation/Mesh/PointSetWithCovariantVectors.cxx:51: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/PointSetWithCovariantVectors make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/PointSetWithCovariantVectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/PointSetWithCovariantVectors.dir/PointSetWithCovariantVectors.cxx.o -o ../../../bin/PointSetWithCovariantVectors -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target PointSetWithCovariantVectors make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/RGBPointSet.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/RGBPointSet.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/RGBPointSet.dir/DependInfo.cmake --color= Scanning dependencies of target RGBPointSet make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/RGBPointSet.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/RGBPointSet.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/RGBPointSet.dir/RGBPointSet.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/RGBPointSet.dir/RGBPointSet.cxx.o -c /<>/Examples/DataRepresentation/Mesh/RGBPointSet.cxx In file included from /<>/Examples/DataRepresentation/Mesh/RGBPointSet.cxx:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/RGBPointSet make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGBPointSet.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/RGBPointSet.dir/RGBPointSet.cxx.o -o ../../../bin/RGBPointSet -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target RGBPointSet make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/PointSet1.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/PointSet1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/PointSet1.dir/DependInfo.cmake --color= Scanning dependencies of target PointSet1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/PointSet1.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/PointSet1.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/PointSet1.dir/PointSet1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MeshCellVisitor2.dir/MeshCellVisitor2.cxx.o -c /<>/Examples/DataRepresentation/Mesh/MeshCellVisitor2.cxx In file included from /<>/Examples/DataRepresentation/Mesh/MeshCellVisitor2.cxx:37: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/MeshCellVisitor2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeshCellVisitor2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MeshCellVisitor2.dir/MeshCellVisitor2.cxx.o -o ../../../bin/MeshCellVisitor2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target MeshCellVisitor2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/Mesh2.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/Mesh2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/Mesh2.dir/DependInfo.cmake --color= Scanning dependencies of target Mesh2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/Mesh2.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/Mesh2.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/Mesh2.dir/Mesh2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Generating ITKLabelMapPython.cpp, ../../../lib/ITKLabelMapPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelMap/ITKLabelMapPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKLabelMap.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/PointSet1.dir/PointSet1.cxx.o -c /<>/Examples/DataRepresentation/Mesh/PointSet1.cxx In file included from /<>/Examples/DataRepresentation/Mesh/PointSet1.cxx:46: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/PointSet1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/PointSet1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/PointSet1.dir/PointSet1.cxx.o -o ../../../bin/PointSet1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target PointSet1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/AutomaticMesh.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/AutomaticMesh.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/AutomaticMesh.dir/DependInfo.cmake --color= Scanning dependencies of target AutomaticMesh make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/AutomaticMesh.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/AutomaticMesh.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/AutomaticMesh.dir/AutomaticMesh.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/Mesh2.dir/Mesh2.cxx.o -c /<>/Examples/DataRepresentation/Mesh/Mesh2.cxx In file included from /<>/Examples/DataRepresentation/Mesh/Mesh2.cxx:36: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/Mesh2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/LabelMap/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKLabelMap /<>/BUILD/Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelMapPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/build.make Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/Mesh2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/Mesh2.dir/Mesh2.cxx.o -o ../../../bin/Mesh2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target Mesh2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/PointSet2.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/PointSet2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/ITKLabelMapPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/PointSet2.dir/DependInfo.cmake --color= Scanning dependencies of target PointSet2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/PointSet2.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/PointSet2.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/PointSet2.dir/PointSet2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/ITKLabelMapPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/ITKLabelMapPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelObjectLinePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/PointSet2.dir/PointSet2.cxx.o -c /<>/Examples/DataRepresentation/Mesh/PointSet2.cxx In file included from /<>/Examples/DataRepresentation/Mesh/PointSet2.cxx:30: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/PointSet2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/PointSet2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/PointSet2.dir/PointSet2.cxx.o -o ../../../bin/PointSet2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target PointSet2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/MeshTraits.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/MeshTraits.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/MeshTraits.dir/DependInfo.cmake --color= Scanning dependencies of target MeshTraits make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/MeshTraits.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/MeshTraits.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/MeshTraits.dir/MeshTraits.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/AutomaticMesh.dir/AutomaticMesh.cxx.o -c /<>/Examples/DataRepresentation/Mesh/AutomaticMesh.cxx In file included from /<>/Examples/DataRepresentation/Mesh/AutomaticMesh.cxx:54: In file included from /<>/Modules/Core/Mesh/include/itkAutomaticTopologyMeshSource.h:22: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/AutomaticMesh make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/AutomaticMesh.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/AutomaticMesh.dir/AutomaticMesh.cxx.o -o ../../../bin/AutomaticMesh -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target AutomaticMesh make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/MeshKComplex.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/MeshKComplex.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/MeshKComplex.dir/DependInfo.cmake --color= Scanning dependencies of target MeshKComplex make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/MeshKComplex.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/MeshKComplex.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/MeshKComplex.dir/MeshKComplex.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelObjectLinePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelObjectLinePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MeshTraits.dir/MeshTraits.cxx.o -c /<>/Examples/DataRepresentation/Mesh/MeshTraits.cxx In file included from /<>/Examples/DataRepresentation/Mesh/MeshTraits.cxx:65: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/MeshTraits make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeshTraits.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MeshTraits.dir/MeshTraits.cxx.o -o ../../../bin/MeshTraits -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target MeshTraits make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/MeshPolyLine.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/MeshPolyLine.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/MeshPolyLine.dir/DependInfo.cmake --color= Scanning dependencies of target MeshPolyLine make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/MeshPolyLine.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/MeshPolyLine.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/MeshPolyLine.dir/MeshPolyLine.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MeshKComplex.dir/MeshKComplex.cxx.o -c /<>/Examples/DataRepresentation/Mesh/MeshKComplex.cxx In file included from /<>/Examples/DataRepresentation/Mesh/MeshKComplex.cxx:51: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/MeshKComplex make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeshKComplex.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MeshKComplex.dir/MeshKComplex.cxx.o -o ../../../bin/MeshKComplex -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target MeshKComplex make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/ImageToPointSet.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/ImageToPointSet.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkNeighborhoodPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkNeighborhoodPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/ImageToPointSet.dir/DependInfo.cmake --color= Scanning dependencies of target ImageToPointSet make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/ImageToPointSet.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/ImageToPointSet.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkImageSourceCommonPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/ImageToPointSet.dir/ImageToPointSet.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MeshPolyLine.dir/MeshPolyLine.cxx.o -c /<>/Examples/DataRepresentation/Mesh/MeshPolyLine.cxx In file included from /<>/Examples/DataRepresentation/Mesh/MeshPolyLine.cxx:41: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/MeshPolyLine make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeshPolyLine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MeshPolyLine.dir/MeshPolyLine.cxx.o -o ../../../bin/MeshPolyLine -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target MeshPolyLine make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellsIteration.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellsIteration.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkImageSourceCommonPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageSourceCommonPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellsIteration.dir/DependInfo.cmake --color= Scanning dependencies of target MeshCellsIteration make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellsIteration.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellsIteration.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkImageSourcePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellsIteration.dir/MeshCellsIteration.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MeshCellsIteration.dir/MeshCellsIteration.cxx.o -c /<>/Examples/DataRepresentation/Mesh/MeshCellsIteration.cxx In file included from /<>/Examples/DataRepresentation/Mesh/MeshCellsIteration.cxx:35: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/MeshCellsIteration make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageToPointSet.dir/ImageToPointSet.cxx.o -c /<>/Examples/DataRepresentation/Mesh/ImageToPointSet.cxx In file included from /<>/Examples/DataRepresentation/Mesh/ImageToPointSet.cxx:26: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/ImageToPointSet make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeshCellsIteration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MeshCellsIteration.dir/MeshCellsIteration.cxx.o -o ../../../bin/MeshCellsIteration -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target MeshCellsIteration make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkStatisticsLabelObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkShapeLabelObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageToPointSet.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageToPointSet.dir/ImageToPointSet.cxx.o -o ../../../bin/ImageToPointSet -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ImageToPointSet make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/Mesh3.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/Mesh3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/Mesh3.dir/DependInfo.cmake --color= Scanning dependencies of target Mesh3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/Mesh3.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/Mesh3.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/Mesh3.dir/Mesh3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/Mesh3.dir/Mesh3.cxx.o -c /<>/Examples/DataRepresentation/Mesh/Mesh3.cxx In file included from /<>/Examples/DataRepresentation/Mesh/Mesh3.cxx:43: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/Mesh3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/Mesh3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/Mesh3.dir/Mesh3.cxx.o -o ../../../bin/Mesh3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target Mesh3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellVisitor.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellVisitor.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Mesh /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Mesh /<>/BUILD/Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellVisitor.dir/DependInfo.cmake --color= Scanning dependencies of target MeshCellVisitor make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellVisitor.dir/build.make Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellVisitor.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Mesh/CMakeFiles/MeshCellVisitor.dir/MeshCellVisitor.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MeshCellVisitor.dir/MeshCellVisitor.cxx.o -c /<>/Examples/DataRepresentation/Mesh/MeshCellVisitor.cxx In file included from /<>/Examples/DataRepresentation/Mesh/MeshCellVisitor.cxx:38: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX executable ../../../bin/MeshCellVisitor make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Mesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeshCellVisitor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MeshCellVisitor.dir/MeshCellVisitor.cxx.o -o ../../../bin/MeshCellVisitor -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target MeshCellVisitor make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/ITKLabelMapBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/c++ -DITKSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Smoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSmoothingPython.dir/itkSmoothingRecursiveGaussianImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSmoothing/itkSmoothingRecursiveGaussianImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Linking CXX shared module ../../../lib/_ITKSmoothingPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSmoothing && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKSmoothingPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKSmoothingPython.so CMakeFiles/ITKSmoothingPython.dir/ITKSmoothingPython.cpp.o CMakeFiles/ITKSmoothingPython.dir/itkBinomialBlurImageFilterPython.cpp.o CMakeFiles/ITKSmoothingPython.dir/itkDiscreteGaussianImageFilterPython.cpp.o CMakeFiles/ITKSmoothingPython.dir/itkMeanImageFilterPython.cpp.o CMakeFiles/ITKSmoothingPython.dir/itkMedianImageFilterPython.cpp.o CMakeFiles/ITKSmoothingPython.dir/itkRecursiveGaussianImageFilterPython.cpp.o CMakeFiles/ITKSmoothingPython.dir/itkSmoothingRecursiveGaussianImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 73%] Built target ITKSmoothingPython make[2]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Path/CMakeFiles/PolyLineParametricPath1.dir/build.make Examples/DataRepresentation/Path/CMakeFiles/PolyLineParametricPath1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/DataRepresentation/Path /<>/BUILD /<>/BUILD/Examples/DataRepresentation/Path /<>/BUILD/Examples/DataRepresentation/Path/CMakeFiles/PolyLineParametricPath1.dir/DependInfo.cmake --color= Scanning dependencies of target PolyLineParametricPath1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/DataRepresentation/Path/CMakeFiles/PolyLineParametricPath1.dir/build.make Examples/DataRepresentation/Path/CMakeFiles/PolyLineParametricPath1.dir/build make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Examples/DataRepresentation/Path/CMakeFiles/PolyLineParametricPath1.dir/PolyLineParametricPath1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkShapeLabelObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeLabelObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 73%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Path && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/PolyLineParametricPath1.dir/PolyLineParametricPath1.cxx.o -c /<>/Examples/DataRepresentation/Path/PolyLineParametricPath1.cxx In file included from /<>/Examples/DataRepresentation/Path/PolyLineParametricPath1.cxx:33: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Linking CXX executable ../../../bin/PolyLineParametricPath1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/DataRepresentation/Path && /usr/bin/cmake -E cmake_link_script CMakeFiles/PolyLineParametricPath1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/PolyLineParametricPath1.dir/PolyLineParametricPath1.cxx.o -o ../../../bin/PolyLineParametricPath1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 74%] Built target PolyLineParametricPath1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GradientAnisotropicDiffusionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/GradientAnisotropicDiffusionImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/GradientAnisotropicDiffusionImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target GradientAnisotropicDiffusionImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GradientAnisotropicDiffusionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/GradientAnisotropicDiffusionImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Examples/Filtering/CMakeFiles/GradientAnisotropicDiffusionImageFilter.dir/GradientAnisotropicDiffusionImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsLabelObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsLabelObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkInPlaceLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkImageSourcePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageSourcePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkImageToImageFilterCommonPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkImageToImageFilterCommonPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageToImageFilterCommonPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkImageToImageFilterAPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GradientAnisotropicDiffusionImageFilter.dir/GradientAnisotropicDiffusionImageFilter.cxx.o -c /<>/Examples/Filtering/GradientAnisotropicDiffusionImageFilter.cxx In file included from /<>/Examples/Filtering/GradientAnisotropicDiffusionImageFilter.cxx:47: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Linking CXX executable ../../bin/GradientAnisotropicDiffusionImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/GradientAnisotropicDiffusionImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GradientAnisotropicDiffusionImageFilter.dir/GradientAnisotropicDiffusionImageFilter.cxx.o -o ../../bin/GradientAnisotropicDiffusionImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 74%] Built target GradientAnisotropicDiffusionImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GradientVectorFlowImageFilter.dir/build.make Examples/Filtering/CMakeFiles/GradientVectorFlowImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/GradientVectorFlowImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target GradientVectorFlowImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GradientVectorFlowImageFilter.dir/build.make Examples/Filtering/CMakeFiles/GradientVectorFlowImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Examples/Filtering/CMakeFiles/GradientVectorFlowImageFilter.dir/GradientVectorFlowImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkInPlaceLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkInPlaceLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkChangeRegionLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/ITKLabelMapBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/ITKLabelMapBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkAutoCropLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkAggregateLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GradientVectorFlowImageFilter.dir/GradientVectorFlowImageFilter.cxx.o -c /<>/Examples/Filtering/GradientVectorFlowImageFilter.cxx In file included from /<>/Examples/Filtering/GradientVectorFlowImageFilter.cxx:40: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Linking CXX executable ../../bin/GradientVectorFlowImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/GradientVectorFlowImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GradientVectorFlowImageFilter.dir/GradientVectorFlowImageFilter.cxx.o -o ../../bin/GradientVectorFlowImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 74%] Built target GradientVectorFlowImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter6.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter6.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ResampleImageFilter6.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleImageFilter6 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter6.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter6.dir/build make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Examples/Filtering/CMakeFiles/ResampleImageFilter6.dir/ResampleImageFilter6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkChangeRegionLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkChangeRegionLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkBinaryFillholeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkAggregateLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkAggregateLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkBinaryGrindPeakImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ResampleImageFilter6.dir/ResampleImageFilter6.cxx.o -c /<>/Examples/Filtering/ResampleImageFilter6.cxx In file included from /<>/Examples/Filtering/ResampleImageFilter6.cxx:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Linking CXX executable ../../bin/ResampleImageFilter6 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleImageFilter6.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleImageFilter6.dir/ResampleImageFilter6.cxx.o -o ../../bin/ResampleImageFilter6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 74%] Built target ResampleImageFilter6 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/MeanImageFilter.dir/build.make Examples/Filtering/CMakeFiles/MeanImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/MeanImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target MeanImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/MeanImageFilter.dir/build.make Examples/Filtering/CMakeFiles/MeanImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Examples/Filtering/CMakeFiles/MeanImageFilter.dir/MeanImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkAutoCropLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkAutoCropLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkBinaryImageToLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MeanImageFilter.dir/MeanImageFilter.cxx.o -c /<>/Examples/Filtering/MeanImageFilter.cxx In file included from /<>/Examples/Filtering/MeanImageFilter.cxx:62: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 74%] Linking CXX executable ../../bin/MeanImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeanImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MeanImageFilter.dir/MeanImageFilter.cxx.o -o ../../bin/MeanImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 74%] Built target MeanImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/MathematicalMorphologyBinaryFilters.dir/build.make Examples/Filtering/CMakeFiles/MathematicalMorphologyBinaryFilters.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/MathematicalMorphologyBinaryFilters.dir/DependInfo.cmake --color= Scanning dependencies of target MathematicalMorphologyBinaryFilters make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/MathematicalMorphologyBinaryFilters.dir/build.make Examples/Filtering/CMakeFiles/MathematicalMorphologyBinaryFilters.dir/build make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Examples/Filtering/CMakeFiles/MathematicalMorphologyBinaryFilters.dir/MathematicalMorphologyBinaryFilters.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MathematicalMorphologyBinaryFilters.dir/MathematicalMorphologyBinaryFilters.cxx.o -c /<>/Examples/Filtering/MathematicalMorphologyBinaryFilters.cxx In file included from /<>/Examples/Filtering/MathematicalMorphologyBinaryFilters.cxx:40: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Linking CXX executable ../../bin/MathematicalMorphologyBinaryFilters make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/MathematicalMorphologyBinaryFilters.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MathematicalMorphologyBinaryFilters.dir/MathematicalMorphologyBinaryFilters.cxx.o -o ../../bin/MathematicalMorphologyBinaryFilters -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 75%] Built target MathematicalMorphologyBinaryFilters make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/BinaryMinMaxCurvatureFlowImageFilter.dir/build.make Examples/Filtering/CMakeFiles/BinaryMinMaxCurvatureFlowImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/BinaryMinMaxCurvatureFlowImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target BinaryMinMaxCurvatureFlowImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/BinaryMinMaxCurvatureFlowImageFilter.dir/build.make Examples/Filtering/CMakeFiles/BinaryMinMaxCurvatureFlowImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Examples/Filtering/CMakeFiles/BinaryMinMaxCurvatureFlowImageFilter.dir/BinaryMinMaxCurvatureFlowImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkBinaryImageToLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryImageToLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkBinaryImageToShapeLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/BinaryMinMaxCurvatureFlowImageFilter.dir/BinaryMinMaxCurvatureFlowImageFilter.cxx.o -c /<>/Examples/Filtering/BinaryMinMaxCurvatureFlowImageFilter.cxx In file included from /<>/Examples/Filtering/BinaryMinMaxCurvatureFlowImageFilter.cxx:60: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Linking CXX executable ../../bin/BinaryMinMaxCurvatureFlowImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/BinaryMinMaxCurvatureFlowImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/BinaryMinMaxCurvatureFlowImageFilter.dir/BinaryMinMaxCurvatureFlowImageFilter.cxx.o -o ../../bin/BinaryMinMaxCurvatureFlowImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 75%] Built target BinaryMinMaxCurvatureFlowImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/OtsuThresholdImageFilter.dir/build.make Examples/Filtering/CMakeFiles/OtsuThresholdImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/OtsuThresholdImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target OtsuThresholdImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/OtsuThresholdImageFilter.dir/build.make Examples/Filtering/CMakeFiles/OtsuThresholdImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Examples/Filtering/CMakeFiles/OtsuThresholdImageFilter.dir/OtsuThresholdImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/OtsuThresholdImageFilter.dir/OtsuThresholdImageFilter.cxx.o -c /<>/Examples/Filtering/OtsuThresholdImageFilter.cxx In file included from /<>/Examples/Filtering/OtsuThresholdImageFilter.cxx:32: In file included from /<>/Modules/Filtering/Thresholding/include/itkOtsuThresholdImageFilter.h:22: In file included from /<>/Modules/Filtering/Thresholding/include/itkHistogramThresholdImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Linking CXX executable ../../bin/OtsuThresholdImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/OtsuThresholdImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/OtsuThresholdImageFilter.dir/OtsuThresholdImageFilter.cxx.o -o ../../bin/OtsuThresholdImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 75%] Built target OtsuThresholdImageFilter make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkBinaryImageToStatisticsLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkBinaryGrindPeakImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryGrindPeakImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkBinaryNotImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkImageToImageFilterAPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageToImageFilterAPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkImageToImageFilterBPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkBinaryFillholeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryFillholeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkBinaryReconstructionByDilationImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkBinaryImageToShapeLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryImageToShapeLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkBinaryReconstructionByErosionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkBinaryNotImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryNotImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkBinaryShapeKeepNObjectsImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkBinaryReconstructionByDilationImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryReconstructionByDilationImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkBinaryShapeOpeningImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkBinaryImageToStatisticsLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryImageToStatisticsLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkBinaryStatisticsKeepNObjectsImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkBinaryReconstructionByErosionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryReconstructionByErosionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkBinaryStatisticsOpeningImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageNoise/itkSaltAndPepperNoiseImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSaltAndPepperNoiseImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkChangeLabelLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkChangeLabelLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkChangeLabelLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkCropLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkCropLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkCropLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelImageToLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkBinaryShapeKeepNObjectsImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryShapeKeepNObjectsImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelImageToShapeLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelImageToLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelImageToLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelImageToStatisticsLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkBinaryShapeOpeningImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryShapeOpeningImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelMapMaskImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageNoise/itkShotNoiseImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShotNoiseImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelMapToBinaryImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelImageToShapeLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelImageToShapeLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelMapToLabelImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageNoise/itkSpeckleNoiseImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSpeckleNoiseImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Generating ITKImageNoisePython.cpp, ../../../lib/ITKImageNoisePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageNoise/ITKImageNoisePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageNoise.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageNoise/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageNoise /<>/BUILD/Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoisePython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageNoisePython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoisePython.dir/build.make Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoisePython.dir/build make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoisePython.dir/ITKImageNoisePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkBinaryStatisticsOpeningImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryStatisticsOpeningImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelSelectionLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/c++ -DITKImageNoisePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageNoise/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageNoisePython.dir/ITKImageNoisePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageNoise/ITKImageNoisePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoisePython.dir/itkAdditiveGaussianNoiseImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelMapToLabelImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelMapToLabelImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelShapeKeepNObjectsImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelMapToBinaryImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelMapToBinaryImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelShapeOpeningImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelMapMaskImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelMapMaskImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelStatisticsKeepNObjectsImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelSelectionLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelSelectionLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelStatisticsOpeningImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkBinaryStatisticsKeepNObjectsImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkBinaryStatisticsKeepNObjectsImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkLabelUniqueLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelImageToStatisticsLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelImageToStatisticsLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoisePython.dir/itkNoiseBaseImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/c++ -DITKImageNoisePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageNoise/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageNoisePython.dir/itkAdditiveGaussianNoiseImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageNoise/itkAdditiveGaussianNoiseImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoisePython.dir/itkSaltAndPepperNoiseImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/c++ -DITKImageNoisePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageNoise/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageNoisePython.dir/itkNoiseBaseImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageNoise/itkNoiseBaseImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoisePython.dir/itkShotNoiseImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/c++ -DITKImageNoisePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageNoise/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageNoisePython.dir/itkSaltAndPepperNoiseImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageNoise/itkSaltAndPepperNoiseImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKImageNoise/CMakeFiles/ITKImageNoisePython.dir/itkSpeckleNoiseImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/c++ -DITKImageNoisePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageNoise/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageNoisePython.dir/itkShotNoiseImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageNoise/itkShotNoiseImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelUniqueLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelUniqueLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkMergeLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkObjectByObjectLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkImageToImageFilterBPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageToImageFilterBPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkInPlaceImageFilterAPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelShapeOpeningImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelShapeOpeningImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkPadLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkMergeLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkMergeLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkRegionFromReferenceLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/c++ -DITKImageNoisePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageNoise/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageNoisePython.dir/itkSpeckleNoiseImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageNoise/itkSpeckleNoiseImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 75%] Linking CXX shared module ../../../lib/_ITKImageNoisePython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageNoise && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageNoisePython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageNoisePython.so CMakeFiles/ITKImageNoisePython.dir/ITKImageNoisePython.cpp.o CMakeFiles/ITKImageNoisePython.dir/itkAdditiveGaussianNoiseImageFilterPython.cpp.o CMakeFiles/ITKImageNoisePython.dir/itkNoiseBaseImageFilterPython.cpp.o CMakeFiles/ITKImageNoisePython.dir/itkSaltAndPepperNoiseImageFilterPython.cpp.o CMakeFiles/ITKImageNoisePython.dir/itkShotNoiseImageFilterPython.cpp.o CMakeFiles/ITKImageNoisePython.dir/itkSpeckleNoiseImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target ITKImageNoisePython make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/MathematicalMorphologyGrayscaleFilters.dir/build.make Examples/Filtering/CMakeFiles/MathematicalMorphologyGrayscaleFilters.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/MathematicalMorphologyGrayscaleFilters.dir/DependInfo.cmake --color= Scanning dependencies of target MathematicalMorphologyGrayscaleFilters make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/MathematicalMorphologyGrayscaleFilters.dir/build.make Examples/Filtering/CMakeFiles/MathematicalMorphologyGrayscaleFilters.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/MathematicalMorphologyGrayscaleFilters.dir/MathematicalMorphologyGrayscaleFilters.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkPadLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkPadLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkRelabelLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkRegionFromReferenceLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkRegionFromReferenceLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkShapeKeepNObjectsLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkObjectByObjectLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkObjectByObjectLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkShapeLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelStatisticsOpeningImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelStatisticsOpeningImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkShapeOpeningLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MathematicalMorphologyGrayscaleFilters.dir/MathematicalMorphologyGrayscaleFilters.cxx.o -c /<>/Examples/Filtering/MathematicalMorphologyGrayscaleFilters.cxx In file included from /<>/Examples/Filtering/MathematicalMorphologyGrayscaleFilters.cxx:41: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/MathematicalMorphologyGrayscaleFilters make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/MathematicalMorphologyGrayscaleFilters.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MathematicalMorphologyGrayscaleFilters.dir/MathematicalMorphologyGrayscaleFilters.cxx.o -o ../../bin/MathematicalMorphologyGrayscaleFilters -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target MathematicalMorphologyGrayscaleFilters make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SigmoidImageFilter.dir/build.make Examples/Filtering/CMakeFiles/SigmoidImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/SigmoidImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target SigmoidImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SigmoidImageFilter.dir/build.make Examples/Filtering/CMakeFiles/SigmoidImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/SigmoidImageFilter.dir/SigmoidImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkRelabelLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkRelabelLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkShapePositionLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkInPlaceImageFilterAPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkInPlaceImageFilterAPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkInPlaceImageFilterBPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkShapeOpeningLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeOpeningLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkShapeRelabelImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SigmoidImageFilter.dir/SigmoidImageFilter.cxx.o -c /<>/Examples/Filtering/SigmoidImageFilter.cxx In file included from /<>/Examples/Filtering/SigmoidImageFilter.cxx:65: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/SigmoidImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/SigmoidImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SigmoidImageFilter.dir/SigmoidImageFilter.cxx.o -o ../../bin/SigmoidImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target SigmoidImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/BinomialBlurImageFilter.dir/build.make Examples/Filtering/CMakeFiles/BinomialBlurImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/BinomialBlurImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target BinomialBlurImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/BinomialBlurImageFilter.dir/build.make Examples/Filtering/CMakeFiles/BinomialBlurImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/BinomialBlurImageFilter.dir/BinomialBlurImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelShapeKeepNObjectsImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelShapeKeepNObjectsImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkShapeRelabelLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkShapeKeepNObjectsLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeKeepNObjectsLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkShapeUniqueLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkShapePositionLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapePositionLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkShiftScaleLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/BinomialBlurImageFilter.dir/BinomialBlurImageFilter.cxx.o -c /<>/Examples/Filtering/BinomialBlurImageFilter.cxx In file included from /<>/Examples/Filtering/BinomialBlurImageFilter.cxx:37: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/BinomialBlurImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/BinomialBlurImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/BinomialBlurImageFilter.dir/BinomialBlurImageFilter.cxx.o -o ../../bin/BinomialBlurImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target BinomialBlurImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleOrientedImageFilter.dir/build.make Examples/Filtering/CMakeFiles/ResampleOrientedImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ResampleOrientedImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleOrientedImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleOrientedImageFilter.dir/build.make Examples/Filtering/CMakeFiles/ResampleOrientedImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/ResampleOrientedImageFilter.dir/ResampleOrientedImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkShapeLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkStatisticsKeepNObjectsLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ResampleOrientedImageFilter.dir/ResampleOrientedImageFilter.cxx.o -c /<>/Examples/Filtering/ResampleOrientedImageFilter.cxx In file included from /<>/Examples/Filtering/ResampleOrientedImageFilter.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/ResampleOrientedImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleOrientedImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleOrientedImageFilter.dir/ResampleOrientedImageFilter.cxx.o -o ../../bin/ResampleOrientedImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target ResampleOrientedImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GaussianBlurImageFunction.dir/build.make Examples/Filtering/CMakeFiles/GaussianBlurImageFunction.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/GaussianBlurImageFunction.dir/DependInfo.cmake --color= Scanning dependencies of target GaussianBlurImageFunction make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GaussianBlurImageFunction.dir/build.make Examples/Filtering/CMakeFiles/GaussianBlurImageFunction.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/GaussianBlurImageFunction.dir/GaussianBlurImageFunction.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkShiftScaleLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShiftScaleLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkStatisticsLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkLabelStatisticsKeepNObjectsImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkLabelStatisticsKeepNObjectsImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkStatisticsOpeningLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkShapeUniqueLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeUniqueLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkStatisticsPositionLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GaussianBlurImageFunction.dir/GaussianBlurImageFunction.cxx.o -c /<>/Examples/Filtering/GaussianBlurImageFunction.cxx In file included from /<>/Examples/Filtering/GaussianBlurImageFunction.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/GaussianBlurImageFunction make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkShapeRelabelLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeRelabelLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkStatisticsRelabelImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/GaussianBlurImageFunction.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GaussianBlurImageFunction.dir/GaussianBlurImageFunction.cxx.o -o ../../bin/GaussianBlurImageFunction -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target GaussianBlurImageFunction make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GradientMagnitudeRecursiveGaussianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/GradientMagnitudeRecursiveGaussianImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/GradientMagnitudeRecursiveGaussianImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target GradientMagnitudeRecursiveGaussianImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GradientMagnitudeRecursiveGaussianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/GradientMagnitudeRecursiveGaussianImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/GradientMagnitudeRecursiveGaussianImageFilter.dir/GradientMagnitudeRecursiveGaussianImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GradientMagnitudeRecursiveGaussianImageFilter.dir/GradientMagnitudeRecursiveGaussianImageFilter.cxx.o -c /<>/Examples/Filtering/GradientMagnitudeRecursiveGaussianImageFilter.cxx In file included from /<>/Examples/Filtering/GradientMagnitudeRecursiveGaussianImageFilter.cxx:62: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/GradientMagnitudeRecursiveGaussianImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/GradientMagnitudeRecursiveGaussianImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GradientMagnitudeRecursiveGaussianImageFilter.dir/GradientMagnitudeRecursiveGaussianImageFilter.cxx.o -o ../../bin/GradientMagnitudeRecursiveGaussianImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target GradientMagnitudeRecursiveGaussianImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/DiscreteGaussianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/DiscreteGaussianImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/DiscreteGaussianImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target DiscreteGaussianImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/DiscreteGaussianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/DiscreteGaussianImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/DiscreteGaussianImageFilter.dir/DiscreteGaussianImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsPositionLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsPositionLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkStatisticsRelabelLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsOpeningLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsOpeningLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKLabelMap/CMakeFiles/ITKLabelMapPython.dir/itkStatisticsUniqueLabelMapFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DiscreteGaussianImageFilter.dir/DiscreteGaussianImageFilter.cxx.o -c /<>/Examples/Filtering/DiscreteGaussianImageFilter.cxx In file included from /<>/Examples/Filtering/DiscreteGaussianImageFilter.cxx:58: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/DiscreteGaussianImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsKeepNObjectsLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsKeepNObjectsLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter9.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter9.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/DiscreteGaussianImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DiscreteGaussianImageFilter.dir/DiscreteGaussianImageFilter.cxx.o -o ../../bin/DiscreteGaussianImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target DiscreteGaussianImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/CastingImageFilters.dir/build.make Examples/Filtering/CMakeFiles/CastingImageFilters.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ResampleImageFilter9.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleImageFilter9 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter9.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter9.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/ResampleImageFilter9.dir/ResampleImageFilter9.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/CastingImageFilters.dir/DependInfo.cmake --color= Scanning dependencies of target CastingImageFilters make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/CastingImageFilters.dir/build.make Examples/Filtering/CMakeFiles/CastingImageFilters.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/CastingImageFilters.dir/CastingImageFilters.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CastingImageFilters.dir/CastingImageFilters.cxx.o -c /<>/Examples/Filtering/CastingImageFilters.cxx In file included from /<>/Examples/Filtering/CastingImageFilters.cxx:89: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/CastingImageFilters make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/CastingImageFilters.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CastingImageFilters.dir/CastingImageFilters.cxx.o -o ../../bin/CastingImageFilters -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target CastingImageFilters make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter2.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ResampleImageFilter2.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleImageFilter2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter2.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter2.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/ResampleImageFilter2.dir/ResampleImageFilter2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ResampleImageFilter9.dir/ResampleImageFilter9.cxx.o -c /<>/Examples/Filtering/ResampleImageFilter9.cxx In file included from /<>/Examples/Filtering/ResampleImageFilter9.cxx:34: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/ResampleImageFilter9 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleImageFilter9.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleImageFilter9.dir/ResampleImageFilter9.cxx.o -o ../../bin/ResampleImageFilter9 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target ResampleImageFilter9 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/VectorCurvatureAnisotropicDiffusionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/VectorCurvatureAnisotropicDiffusionImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/VectorCurvatureAnisotropicDiffusionImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target VectorCurvatureAnisotropicDiffusionImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/VectorCurvatureAnisotropicDiffusionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/VectorCurvatureAnisotropicDiffusionImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/VectorCurvatureAnisotropicDiffusionImageFilter.dir/VectorCurvatureAnisotropicDiffusionImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkInPlaceImageFilterBPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkInPlaceImageFilterBPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkDefaultDynamicMeshTraitsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkDefaultStaticMeshTraitsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkDefaultDynamicMeshTraitsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkDefaultDynamicMeshTraitsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkFunctionBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsUniqueLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsUniqueLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkArray2DPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkDefaultStaticMeshTraitsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkDefaultStaticMeshTraitsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkBSplineInterpolationWeightFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ResampleImageFilter2.dir/ResampleImageFilter2.cxx.o -c /<>/Examples/Filtering/ResampleImageFilter2.cxx In file included from /<>/Examples/Filtering/ResampleImageFilter2.cxx:52: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/ResampleImageFilter2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleImageFilter2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleImageFilter2.dir/ResampleImageFilter2.cxx.o -o ../../bin/ResampleImageFilter2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target ResampleImageFilter2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GradientMagnitudeImageFilter.dir/build.make Examples/Filtering/CMakeFiles/GradientMagnitudeImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/GradientMagnitudeImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target GradientMagnitudeImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GradientMagnitudeImageFilter.dir/build.make Examples/Filtering/CMakeFiles/GradientMagnitudeImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/GradientMagnitudeImageFilter.dir/GradientMagnitudeImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkArray2DPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkArray2DPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkDiffusionTensor3DPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkDiffusionTensor3DPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkDiffusionTensor3DPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkExtractImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkFunctionBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkFunctionBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkImageBoundaryConditionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkBSplineInterpolationWeightFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkBSplineInterpolationWeightFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkImageDuplicatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/VectorCurvatureAnisotropicDiffusionImageFilter.dir/VectorCurvatureAnisotropicDiffusionImageFilter.cxx.o -c /<>/Examples/Filtering/VectorCurvatureAnisotropicDiffusionImageFilter.cxx In file included from /<>/Examples/Filtering/VectorCurvatureAnisotropicDiffusionImageFilter.cxx:42: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/VectorCurvatureAnisotropicDiffusionImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/VectorCurvatureAnisotropicDiffusionImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/VectorCurvatureAnisotropicDiffusionImageFilter.dir/VectorCurvatureAnisotropicDiffusionImageFilter.cxx.o -o ../../bin/VectorCurvatureAnisotropicDiffusionImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target VectorCurvatureAnisotropicDiffusionImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/MorphologicalImageEnhancement.dir/build.make Examples/Filtering/CMakeFiles/MorphologicalImageEnhancement.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/MorphologicalImageEnhancement.dir/DependInfo.cmake --color= Scanning dependencies of target MorphologicalImageEnhancement make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/MorphologicalImageEnhancement.dir/build.make Examples/Filtering/CMakeFiles/MorphologicalImageEnhancement.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/MorphologicalImageEnhancement.dir/MorphologicalImageEnhancement.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GradientMagnitudeImageFilter.dir/GradientMagnitudeImageFilter.cxx.o -c /<>/Examples/Filtering/GradientMagnitudeImageFilter.cxx In file included from /<>/Examples/Filtering/GradientMagnitudeImageFilter.cxx:55: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/GradientMagnitudeImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/GradientMagnitudeImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GradientMagnitudeImageFilter.dir/GradientMagnitudeImageFilter.cxx.o -o ../../bin/GradientMagnitudeImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target GradientMagnitudeImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/FFTDirectInverse2.dir/build.make Examples/Filtering/CMakeFiles/FFTDirectInverse2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/FFTDirectInverse2.dir/DependInfo.cmake --color= Scanning dependencies of target FFTDirectInverse2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/FFTDirectInverse2.dir/build.make Examples/Filtering/CMakeFiles/FFTDirectInverse2.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/FFTDirectInverse2.dir/FFTDirectInverse2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsRelabelLabelMapFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsRelabelLabelMapFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/BilateralImageFilter.dir/build.make Examples/Filtering/CMakeFiles/BilateralImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/BilateralImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target BilateralImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/BilateralImageFilter.dir/build.make Examples/Filtering/CMakeFiles/BilateralImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/BilateralImageFilter.dir/BilateralImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/FFTDirectInverse2.dir/FFTDirectInverse2.cxx.o -c /<>/Examples/Filtering/FFTDirectInverse2.cxx In file included from /<>/Examples/Filtering/FFTDirectInverse2.cxx:35: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/FFTDirectInverse2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/FFTDirectInverse2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/FFTDirectInverse2.dir/FFTDirectInverse2.cxx.o -o ../../bin/FFTDirectInverse2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target FFTDirectInverse2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/BinaryMedianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/BinaryMedianImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/BinaryMedianImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target BinaryMedianImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/BinaryMedianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/BinaryMedianImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/BinaryMedianImageFilter.dir/BinaryMedianImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MorphologicalImageEnhancement.dir/MorphologicalImageEnhancement.cxx.o -c /<>/Examples/Filtering/MorphologicalImageEnhancement.cxx In file included from /<>/Examples/Filtering/MorphologicalImageEnhancement.cxx:34: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/MorphologicalImageEnhancement make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/MorphologicalImageEnhancement.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MorphologicalImageEnhancement.dir/MorphologicalImageEnhancement.cxx.o -o ../../bin/MorphologicalImageEnhancement -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target MorphologicalImageEnhancement make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/BinaryThresholdImageFilter.dir/build.make Examples/Filtering/CMakeFiles/BinaryThresholdImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/BinaryThresholdImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target BinaryThresholdImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/BinaryThresholdImageFilter.dir/build.make Examples/Filtering/CMakeFiles/BinaryThresholdImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/BinaryThresholdImageFilter.dir/BinaryThresholdImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/BilateralImageFilter.dir/BilateralImageFilter.cxx.o -c /<>/Examples/Filtering/BilateralImageFilter.cxx In file included from /<>/Examples/Filtering/BilateralImageFilter.cxx:84: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/BilateralImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/BilateralImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/BilateralImageFilter.dir/BilateralImageFilter.cxx.o -o ../../bin/BilateralImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target BilateralImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/CurvatureFlowImageFilter.dir/build.make Examples/Filtering/CMakeFiles/CurvatureFlowImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/CurvatureFlowImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target CurvatureFlowImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/CurvatureFlowImageFilter.dir/build.make Examples/Filtering/CMakeFiles/CurvatureFlowImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/CurvatureFlowImageFilter.dir/CurvatureFlowImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/BinaryMedianImageFilter.dir/BinaryMedianImageFilter.cxx.o -c /<>/Examples/Filtering/BinaryMedianImageFilter.cxx In file included from /<>/Examples/Filtering/BinaryMedianImageFilter.cxx:47: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/BinaryMedianImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/BinaryMedianImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/BinaryMedianImageFilter.dir/BinaryMedianImageFilter.cxx.o -o ../../bin/BinaryMedianImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target BinaryMedianImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/RGBCurvatureAnisotropicDiffusionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/RGBCurvatureAnisotropicDiffusionImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/RGBCurvatureAnisotropicDiffusionImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target RGBCurvatureAnisotropicDiffusionImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/RGBCurvatureAnisotropicDiffusionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/RGBCurvatureAnisotropicDiffusionImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/RGBCurvatureAnisotropicDiffusionImageFilter.dir/RGBCurvatureAnisotropicDiffusionImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/BinaryThresholdImageFilter.dir/BinaryThresholdImageFilter.cxx.o -c /<>/Examples/Filtering/BinaryThresholdImageFilter.cxx In file included from /<>/Examples/Filtering/BinaryThresholdImageFilter.cxx:56: In file included from /<>/Modules/Filtering/Thresholding/include/itkBinaryThresholdImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/BinaryThresholdImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/BinaryThresholdImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/BinaryThresholdImageFilter.dir/BinaryThresholdImageFilter.cxx.o -o ../../bin/BinaryThresholdImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target BinaryThresholdImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/LaplacianRecursiveGaussianImageFilter2.dir/build.make Examples/Filtering/CMakeFiles/LaplacianRecursiveGaussianImageFilter2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/LaplacianRecursiveGaussianImageFilter2.dir/DependInfo.cmake --color= Scanning dependencies of target LaplacianRecursiveGaussianImageFilter2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/LaplacianRecursiveGaussianImageFilter2.dir/build.make Examples/Filtering/CMakeFiles/LaplacianRecursiveGaussianImageFilter2.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/LaplacianRecursiveGaussianImageFilter2.dir/LaplacianRecursiveGaussianImageFilter2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CurvatureFlowImageFilter.dir/CurvatureFlowImageFilter.cxx.o -c /<>/Examples/Filtering/CurvatureFlowImageFilter.cxx In file included from /<>/Examples/Filtering/CurvatureFlowImageFilter.cxx:55: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/CurvatureFlowImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/CurvatureFlowImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CurvatureFlowImageFilter.dir/CurvatureFlowImageFilter.cxx.o -o ../../bin/CurvatureFlowImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target CurvatureFlowImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/LaplacianRecursiveGaussianImageFilter1.dir/build.make Examples/Filtering/CMakeFiles/LaplacianRecursiveGaussianImageFilter1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/LaplacianRecursiveGaussianImageFilter1.dir/DependInfo.cmake --color= Scanning dependencies of target LaplacianRecursiveGaussianImageFilter1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/LaplacianRecursiveGaussianImageFilter1.dir/build.make Examples/Filtering/CMakeFiles/LaplacianRecursiveGaussianImageFilter1.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/LaplacianRecursiveGaussianImageFilter1.dir/LaplacianRecursiveGaussianImageFilter1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkShapeRelabelImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkShapeRelabelImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/FFTImageFilter.dir/build.make Examples/Filtering/CMakeFiles/FFTImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/FFTImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target FFTImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/FFTImageFilter.dir/build.make Examples/Filtering/CMakeFiles/FFTImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/FFTImageFilter.dir/FFTImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/RGBCurvatureAnisotropicDiffusionImageFilter.dir/RGBCurvatureAnisotropicDiffusionImageFilter.cxx.o -c /<>/Examples/Filtering/RGBCurvatureAnisotropicDiffusionImageFilter.cxx In file included from /<>/Examples/Filtering/RGBCurvatureAnisotropicDiffusionImageFilter.cxx:47: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkVectorCurvatureAnisotropicDiffusionImageFilter.h:22: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkAnisotropicDiffusionImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/RGBCurvatureAnisotropicDiffusionImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGBCurvatureAnisotropicDiffusionImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/RGBCurvatureAnisotropicDiffusionImageFilter.dir/RGBCurvatureAnisotropicDiffusionImageFilter.cxx.o -o ../../bin/RGBCurvatureAnisotropicDiffusionImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target RGBCurvatureAnisotropicDiffusionImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ThresholdImageFilter.dir/build.make Examples/Filtering/CMakeFiles/ThresholdImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ThresholdImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target ThresholdImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ThresholdImageFilter.dir/build.make Examples/Filtering/CMakeFiles/ThresholdImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/ThresholdImageFilter.dir/ThresholdImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/LaplacianRecursiveGaussianImageFilter2.dir/LaplacianRecursiveGaussianImageFilter2.cxx.o -c /<>/Examples/Filtering/LaplacianRecursiveGaussianImageFilter2.cxx In file included from /<>/Examples/Filtering/LaplacianRecursiveGaussianImageFilter2.cxx:45: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/LaplacianRecursiveGaussianImageFilter2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/LaplacianRecursiveGaussianImageFilter2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/LaplacianRecursiveGaussianImageFilter2.dir/LaplacianRecursiveGaussianImageFilter2.cxx.o -o ../../bin/LaplacianRecursiveGaussianImageFilter2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target LaplacianRecursiveGaussianImageFilter2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/CurvatureAnisotropicDiffusionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/CurvatureAnisotropicDiffusionImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/CurvatureAnisotropicDiffusionImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target CurvatureAnisotropicDiffusionImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/CurvatureAnisotropicDiffusionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/CurvatureAnisotropicDiffusionImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/CurvatureAnisotropicDiffusionImageFilter.dir/CurvatureAnisotropicDiffusionImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/LaplacianRecursiveGaussianImageFilter1.dir/LaplacianRecursiveGaussianImageFilter1.cxx.o -c /<>/Examples/Filtering/LaplacianRecursiveGaussianImageFilter1.cxx In file included from /<>/Examples/Filtering/LaplacianRecursiveGaussianImageFilter1.cxx:42: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 76%] Linking CXX executable ../../bin/LaplacianRecursiveGaussianImageFilter1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/LaplacianRecursiveGaussianImageFilter1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/LaplacianRecursiveGaussianImageFilter1.dir/LaplacianRecursiveGaussianImageFilter1.cxx.o -o ../../bin/LaplacianRecursiveGaussianImageFilter1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 76%] Built target LaplacianRecursiveGaussianImageFilter1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/MinMaxCurvatureFlowImageFilter.dir/build.make Examples/Filtering/CMakeFiles/MinMaxCurvatureFlowImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/MinMaxCurvatureFlowImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target MinMaxCurvatureFlowImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/MinMaxCurvatureFlowImageFilter.dir/build.make Examples/Filtering/CMakeFiles/MinMaxCurvatureFlowImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 76%] Building CXX object Examples/Filtering/CMakeFiles/MinMaxCurvatureFlowImageFilter.dir/MinMaxCurvatureFlowImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ThresholdImageFilter.dir/ThresholdImageFilter.cxx.o -c /<>/Examples/Filtering/ThresholdImageFilter.cxx In file included from /<>/Examples/Filtering/ThresholdImageFilter.cxx:99: In file included from /<>/Modules/Filtering/Thresholding/include/itkThresholdImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/ThresholdImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ThresholdImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ThresholdImageFilter.dir/ThresholdImageFilter.cxx.o -o ../../bin/ThresholdImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target ThresholdImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter5.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter5.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ResampleImageFilter5.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleImageFilter5 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter5.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter5.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/ResampleImageFilter5.dir/ResampleImageFilter5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/FFTImageFilter.dir/FFTImageFilter.cxx.o -c /<>/Examples/Filtering/FFTImageFilter.cxx In file included from /<>/Examples/Filtering/FFTImageFilter.cxx:55: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/FFTImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/FFTImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/FFTImageFilter.dir/FFTImageFilter.cxx.o -o ../../bin/FFTImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target FFTImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/FlipImageFilter.dir/build.make Examples/Filtering/CMakeFiles/FlipImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/FlipImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target FlipImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/FlipImageFilter.dir/build.make Examples/Filtering/CMakeFiles/FlipImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/FlipImageFilter.dir/FlipImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CurvatureAnisotropicDiffusionImageFilter.dir/CurvatureAnisotropicDiffusionImageFilter.cxx.o -c /<>/Examples/Filtering/CurvatureAnisotropicDiffusionImageFilter.cxx In file included from /<>/Examples/Filtering/CurvatureAnisotropicDiffusionImageFilter.cxx:62: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/CurvatureAnisotropicDiffusionImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/CurvatureAnisotropicDiffusionImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CurvatureAnisotropicDiffusionImageFilter.dir/CurvatureAnisotropicDiffusionImageFilter.cxx.o -o ../../bin/CurvatureAnisotropicDiffusionImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target CurvatureAnisotropicDiffusionImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GrayscaleFunctionDilateImageFilter.dir/build.make Examples/Filtering/CMakeFiles/GrayscaleFunctionDilateImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/GrayscaleFunctionDilateImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target GrayscaleFunctionDilateImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GrayscaleFunctionDilateImageFilter.dir/build.make Examples/Filtering/CMakeFiles/GrayscaleFunctionDilateImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/GrayscaleFunctionDilateImageFilter.dir/GrayscaleFunctionDilateImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MinMaxCurvatureFlowImageFilter.dir/MinMaxCurvatureFlowImageFilter.cxx.o -c /<>/Examples/Filtering/MinMaxCurvatureFlowImageFilter.cxx In file included from /<>/Examples/Filtering/MinMaxCurvatureFlowImageFilter.cxx:79: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/MinMaxCurvatureFlowImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/MinMaxCurvatureFlowImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MinMaxCurvatureFlowImageFilter.dir/MinMaxCurvatureFlowImageFilter.cxx.o -o ../../bin/MinMaxCurvatureFlowImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target MinMaxCurvatureFlowImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/CannyEdgeDetectionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/CannyEdgeDetectionImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/CannyEdgeDetectionImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target CannyEdgeDetectionImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/CannyEdgeDetectionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/CannyEdgeDetectionImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/CannyEdgeDetectionImageFilter.dir/CannyEdgeDetectionImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ResampleImageFilter5.dir/ResampleImageFilter5.cxx.o -c /<>/Examples/Filtering/ResampleImageFilter5.cxx In file included from /<>/Examples/Filtering/ResampleImageFilter5.cxx:30: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/ResampleImageFilter5 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleImageFilter5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleImageFilter5.dir/ResampleImageFilter5.cxx.o -o ../../bin/ResampleImageFilter5 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target ResampleImageFilter5 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ResampleImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/ResampleImageFilter.dir/ResampleImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/FlipImageFilter.dir/FlipImageFilter.cxx.o -c /<>/Examples/Filtering/FlipImageFilter.cxx In file included from /<>/Examples/Filtering/FlipImageFilter.cxx:45: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/FlipImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/FlipImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/FlipImageFilter.dir/FlipImageFilter.cxx.o -o ../../bin/FlipImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target FlipImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/MedianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/MedianImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/MedianImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target MedianImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/MedianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/MedianImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/MedianImageFilter.dir/MedianImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GrayscaleFunctionDilateImageFilter.dir/GrayscaleFunctionDilateImageFilter.cxx.o -c /<>/Examples/Filtering/GrayscaleFunctionDilateImageFilter.cxx In file included from /<>/Examples/Filtering/GrayscaleFunctionDilateImageFilter.cxx:19: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkGrayscaleFunctionDilateImageFilter.h:21: In file included from /<>/Modules/Filtering/MathematicalMorphology/include/itkMorphologyImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/GrayscaleFunctionDilateImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/GrayscaleFunctionDilateImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GrayscaleFunctionDilateImageFilter.dir/GrayscaleFunctionDilateImageFilter.cxx.o -o ../../bin/GrayscaleFunctionDilateImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target GrayscaleFunctionDilateImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter7.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter7.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ResampleImageFilter7.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleImageFilter7 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter7.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter7.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/ResampleImageFilter7.dir/ResampleImageFilter7.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MedianImageFilter.dir/MedianImageFilter.cxx.o -c /<>/Examples/Filtering/MedianImageFilter.cxx In file included from /<>/Examples/Filtering/MedianImageFilter.cxx:64: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/MedianImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/MedianImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MedianImageFilter.dir/MedianImageFilter.cxx.o -o ../../bin/MedianImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target MedianImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/RGBGradientAnisotropicDiffusionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/RGBGradientAnisotropicDiffusionImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/RGBGradientAnisotropicDiffusionImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target RGBGradientAnisotropicDiffusionImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/RGBGradientAnisotropicDiffusionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/RGBGradientAnisotropicDiffusionImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/RGBGradientAnisotropicDiffusionImageFilter.dir/RGBGradientAnisotropicDiffusionImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ResampleImageFilter.dir/ResampleImageFilter.cxx.o -c /<>/Examples/Filtering/ResampleImageFilter.cxx In file included from /<>/Examples/Filtering/ResampleImageFilter.cxx:60: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/ResampleImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleImageFilter.dir/ResampleImageFilter.cxx.o -o ../../bin/ResampleImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target ResampleImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SignedDanielssonDistanceMapImageFilter.dir/build.make Examples/Filtering/CMakeFiles/SignedDanielssonDistanceMapImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/SignedDanielssonDistanceMapImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target SignedDanielssonDistanceMapImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SignedDanielssonDistanceMapImageFilter.dir/build.make Examples/Filtering/CMakeFiles/SignedDanielssonDistanceMapImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/SignedDanielssonDistanceMapImageFilter.dir/SignedDanielssonDistanceMapImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CannyEdgeDetectionImageFilter.dir/CannyEdgeDetectionImageFilter.cxx.o -c /<>/Examples/Filtering/CannyEdgeDetectionImageFilter.cxx In file included from /<>/Examples/Filtering/CannyEdgeDetectionImageFilter.cxx:42: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/CannyEdgeDetectionImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/CannyEdgeDetectionImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CannyEdgeDetectionImageFilter.dir/CannyEdgeDetectionImageFilter.cxx.o -o ../../bin/CannyEdgeDetectionImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target CannyEdgeDetectionImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SecondDerivativeRecursiveGaussianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/SecondDerivativeRecursiveGaussianImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/SecondDerivativeRecursiveGaussianImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target SecondDerivativeRecursiveGaussianImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SecondDerivativeRecursiveGaussianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/SecondDerivativeRecursiveGaussianImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/SecondDerivativeRecursiveGaussianImageFilter.dir/SecondDerivativeRecursiveGaussianImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ResampleImageFilter7.dir/ResampleImageFilter7.cxx.o -c /<>/Examples/Filtering/ResampleImageFilter7.cxx In file included from /<>/Examples/Filtering/ResampleImageFilter7.cxx:31: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/ResampleImageFilter7 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleImageFilter7.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleImageFilter7.dir/ResampleImageFilter7.cxx.o -o ../../bin/ResampleImageFilter7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target ResampleImageFilter7 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/DerivativeImageFilter.dir/build.make Examples/Filtering/CMakeFiles/DerivativeImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/DerivativeImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target DerivativeImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/DerivativeImageFilter.dir/build.make Examples/Filtering/CMakeFiles/DerivativeImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/DerivativeImageFilter.dir/DerivativeImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SecondDerivativeRecursiveGaussianImageFilter.dir/SecondDerivativeRecursiveGaussianImageFilter.cxx.o -c /<>/Examples/Filtering/SecondDerivativeRecursiveGaussianImageFilter.cxx In file included from /<>/Examples/Filtering/SecondDerivativeRecursiveGaussianImageFilter.cxx:47: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/SecondDerivativeRecursiveGaussianImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/RGBGradientAnisotropicDiffusionImageFilter.dir/RGBGradientAnisotropicDiffusionImageFilter.cxx.o -c /<>/Examples/Filtering/RGBGradientAnisotropicDiffusionImageFilter.cxx In file included from /<>/Examples/Filtering/RGBGradientAnisotropicDiffusionImageFilter.cxx:47: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkVectorGradientAnisotropicDiffusionImageFilter.h:22: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkAnisotropicDiffusionImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/RGBGradientAnisotropicDiffusionImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/SecondDerivativeRecursiveGaussianImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SecondDerivativeRecursiveGaussianImageFilter.dir/SecondDerivativeRecursiveGaussianImageFilter.cxx.o -o ../../bin/SecondDerivativeRecursiveGaussianImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target SecondDerivativeRecursiveGaussianImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/AntiAliasBinaryImageFilter.dir/build.make Examples/Filtering/CMakeFiles/AntiAliasBinaryImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGBGradientAnisotropicDiffusionImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/RGBGradientAnisotropicDiffusionImageFilter.dir/RGBGradientAnisotropicDiffusionImageFilter.cxx.o -o ../../bin/RGBGradientAnisotropicDiffusionImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target RGBGradientAnisotropicDiffusionImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SmoothingRecursiveGaussianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/SmoothingRecursiveGaussianImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/AntiAliasBinaryImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target AntiAliasBinaryImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/AntiAliasBinaryImageFilter.dir/build.make Examples/Filtering/CMakeFiles/AntiAliasBinaryImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/AntiAliasBinaryImageFilter.dir/AntiAliasBinaryImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/SmoothingRecursiveGaussianImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target SmoothingRecursiveGaussianImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SmoothingRecursiveGaussianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/SmoothingRecursiveGaussianImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/SmoothingRecursiveGaussianImageFilter.dir/SmoothingRecursiveGaussianImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SignedDanielssonDistanceMapImageFilter.dir/SignedDanielssonDistanceMapImageFilter.cxx.o -c /<>/Examples/Filtering/SignedDanielssonDistanceMapImageFilter.cxx In file included from /<>/Examples/Filtering/SignedDanielssonDistanceMapImageFilter.cxx:34: In file included from /<>/Modules/Filtering/DistanceMap/include/itkSignedDanielssonDistanceMapImageFilter.h:21: In file included from /<>/Modules/Filtering/DistanceMap/include/itkDanielssonDistanceMapImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/SignedDanielssonDistanceMapImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/SignedDanielssonDistanceMapImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SignedDanielssonDistanceMapImageFilter.dir/SignedDanielssonDistanceMapImageFilter.cxx.o -o ../../bin/SignedDanielssonDistanceMapImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target SignedDanielssonDistanceMapImageFilter make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkImageBoundaryConditionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageBoundaryConditionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkImageDuplicatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageDuplicatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/FFTImageFilterFourierDomainFiltering.dir/build.make Examples/Filtering/CMakeFiles/FFTImageFilterFourierDomainFiltering.dir/depend make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkImageTransformerPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkImportImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/FFTImageFilterFourierDomainFiltering.dir/DependInfo.cmake --color= Scanning dependencies of target FFTImageFilterFourierDomainFiltering make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/FFTImageFilterFourierDomainFiltering.dir/build.make Examples/Filtering/CMakeFiles/FFTImageFilterFourierDomainFiltering.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/FFTImageFilterFourierDomainFiltering.dir/FFTImageFilterFourierDomainFiltering.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DerivativeImageFilter.dir/DerivativeImageFilter.cxx.o -c /<>/Examples/Filtering/DerivativeImageFilter.cxx In file included from /<>/Examples/Filtering/DerivativeImageFilter.cxx:37: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/DerivativeImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/DerivativeImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DerivativeImageFilter.dir/DerivativeImageFilter.cxx.o -o ../../bin/DerivativeImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target DerivativeImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleVolumesToBeIsotropic.dir/build.make Examples/Filtering/CMakeFiles/ResampleVolumesToBeIsotropic.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ResampleVolumesToBeIsotropic.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleVolumesToBeIsotropic make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleVolumesToBeIsotropic.dir/build.make Examples/Filtering/CMakeFiles/ResampleVolumesToBeIsotropic.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/ResampleVolumesToBeIsotropic.dir/ResampleVolumesToBeIsotropic.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SmoothingRecursiveGaussianImageFilter.dir/SmoothingRecursiveGaussianImageFilter.cxx.o -c /<>/Examples/Filtering/SmoothingRecursiveGaussianImageFilter.cxx In file included from /<>/Examples/Filtering/SmoothingRecursiveGaussianImageFilter.cxx:48: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/SmoothingRecursiveGaussianImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmoothingRecursiveGaussianImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SmoothingRecursiveGaussianImageFilter.dir/SmoothingRecursiveGaussianImageFilter.cxx.o -o ../../bin/SmoothingRecursiveGaussianImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target SmoothingRecursiveGaussianImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/LaplacianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/LaplacianImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/LaplacianImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target LaplacianImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/LaplacianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/LaplacianImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/LaplacianImageFilter.dir/LaplacianImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/AntiAliasBinaryImageFilter.dir/AntiAliasBinaryImageFilter.cxx.o -c /<>/Examples/Filtering/AntiAliasBinaryImageFilter.cxx In file included from /<>/Examples/Filtering/AntiAliasBinaryImageFilter.cxx:32: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/AntiAliasBinaryImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/c++ -DITKLabelMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/LabelMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsRelabelImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelMap/itkStatisticsRelabelImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX shared module ../../../lib/_ITKLabelMapPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/AntiAliasBinaryImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/AntiAliasBinaryImageFilter.dir/AntiAliasBinaryImageFilter.cxx.o -o ../../bin/AntiAliasBinaryImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target AntiAliasBinaryImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter8.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter8.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ResampleImageFilter8.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleImageFilter8 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter8.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter8.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/ResampleImageFilter8.dir/ResampleImageFilter8.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/FFTImageFilterFourierDomainFiltering.dir/FFTImageFilterFourierDomainFiltering.cxx.o -c /<>/Examples/Filtering/FFTImageFilterFourierDomainFiltering.cxx In file included from /<>/Examples/Filtering/FFTImageFilterFourierDomainFiltering.cxx:39: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/FFTImageFilterFourierDomainFiltering make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/FFTImageFilterFourierDomainFiltering.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/FFTImageFilterFourierDomainFiltering.dir/FFTImageFilterFourierDomainFiltering.cxx.o -o ../../bin/FFTImageFilterFourierDomainFiltering -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target FFTImageFilterFourierDomainFiltering make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/VectorGradientAnisotropicDiffusionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/VectorGradientAnisotropicDiffusionImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/VectorGradientAnisotropicDiffusionImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target VectorGradientAnisotropicDiffusionImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/VectorGradientAnisotropicDiffusionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/VectorGradientAnisotropicDiffusionImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/VectorGradientAnisotropicDiffusionImageFilter.dir/VectorGradientAnisotropicDiffusionImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ResampleVolumesToBeIsotropic.dir/ResampleVolumesToBeIsotropic.cxx.o -c /<>/Examples/Filtering/ResampleVolumesToBeIsotropic.cxx In file included from /<>/Examples/Filtering/ResampleVolumesToBeIsotropic.cxx:114: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/ResampleVolumesToBeIsotropic make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/LaplacianImageFilter.dir/LaplacianImageFilter.cxx.o -c /<>/Examples/Filtering/LaplacianImageFilter.cxx In file included from /<>/Examples/Filtering/LaplacianImageFilter.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkLaplacianImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 77%] Linking CXX executable ../../bin/LaplacianImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleVolumesToBeIsotropic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleVolumesToBeIsotropic.dir/ResampleVolumesToBeIsotropic.cxx.o -o ../../bin/ResampleVolumesToBeIsotropic -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target ResampleVolumesToBeIsotropic make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/OtsuMultipleThresholdImageFilter.dir/build.make Examples/Filtering/CMakeFiles/OtsuMultipleThresholdImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/OtsuMultipleThresholdImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target OtsuMultipleThresholdImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/OtsuMultipleThresholdImageFilter.dir/build.make Examples/Filtering/CMakeFiles/OtsuMultipleThresholdImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/OtsuMultipleThresholdImageFilter.dir/OtsuMultipleThresholdImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/LaplacianImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/LaplacianImageFilter.dir/LaplacianImageFilter.cxx.o -o ../../bin/LaplacianImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 77%] Built target LaplacianImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SmoothingRecursiveGaussianImageFilter2.dir/build.make Examples/Filtering/CMakeFiles/SmoothingRecursiveGaussianImageFilter2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/SmoothingRecursiveGaussianImageFilter2.dir/DependInfo.cmake --color= Scanning dependencies of target SmoothingRecursiveGaussianImageFilter2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SmoothingRecursiveGaussianImageFilter2.dir/build.make Examples/Filtering/CMakeFiles/SmoothingRecursiveGaussianImageFilter2.dir/build make[3]: Entering directory '/<>/BUILD' [ 77%] Building CXX object Examples/Filtering/CMakeFiles/SmoothingRecursiveGaussianImageFilter2.dir/SmoothingRecursiveGaussianImageFilter2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelMap && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLabelMapPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKLabelMapPython.so CMakeFiles/ITKLabelMapPython.dir/ITKLabelMapPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelObjectLinePython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelObjectPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkShapeLabelObjectPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsLabelObjectPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/ITKLabelMapBasePython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkInPlaceLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkChangeRegionLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkAggregateLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkAutoCropLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkBinaryFillholeImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkBinaryGrindPeakImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkBinaryImageToLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkBinaryImageToShapeLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkBinaryImageToStatisticsLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkBinaryNotImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkBinaryReconstructionByDilationImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkBinaryReconstructionByErosionImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkBinaryShapeKeepNObjectsImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkBinaryShapeOpeningImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkBinaryStatisticsKeepNObjectsImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkBinaryStatisticsOpeningImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkChangeLabelLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkCropLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelImageToLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelImageToShapeLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelImageToStatisticsLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelMapMaskImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelMapToBinaryImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelMapToLabelImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelSelectionLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelShapeKeepNObjectsImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelShapeOpeningImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelStatisticsKeepNObjectsImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelStatisticsOpeningImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkLabelUniqueLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkMergeLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkObjectByObjectLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkPadLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkRegionFromReferenceLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkRelabelLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkShapeKeepNObjectsLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkShapeLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkShapeOpeningLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkShapePositionLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkShapeRelabelImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkShapeRelabelLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkShapeUniqueLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkShiftScaleLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsKeepNObjectsLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsOpeningLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsPositionLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsRelabelImageFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsRelabelLabelMapFilterPython.cpp.o CMakeFiles/ITKLabelMapPython.dir/itkStatisticsUniqueLabelMapFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ITKLabelMapPython make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter3.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ResampleImageFilter3.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleImageFilter3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter3.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter3.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/ResampleImageFilter3.dir/ResampleImageFilter3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkImportImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkImportImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkKernelFunctionBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ResampleImageFilter8.dir/ResampleImageFilter8.cxx.o -c /<>/Examples/Filtering/ResampleImageFilter8.cxx In file included from /<>/Examples/Filtering/ResampleImageFilter8.cxx:36: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ResampleImageFilter8 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleImageFilter8.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleImageFilter8.dir/ResampleImageFilter8.cxx.o -o ../../bin/ResampleImageFilter8 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ResampleImageFilter8 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SubsampleVolume.dir/build.make Examples/Filtering/CMakeFiles/SubsampleVolume.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/SubsampleVolume.dir/DependInfo.cmake --color= Scanning dependencies of target SubsampleVolume make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SubsampleVolume.dir/build.make Examples/Filtering/CMakeFiles/SubsampleVolume.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/SubsampleVolume.dir/SubsampleVolume.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkKernelFunctionBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkKernelFunctionBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkMetaDataObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkImageTransformerPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkImageTransformerPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkMinimumMaximumImageCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SmoothingRecursiveGaussianImageFilter2.dir/SmoothingRecursiveGaussianImageFilter2.cxx.o -c /<>/Examples/Filtering/SmoothingRecursiveGaussianImageFilter2.cxx In file included from /<>/Examples/Filtering/SmoothingRecursiveGaussianImageFilter2.cxx:32: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/SmoothingRecursiveGaussianImageFilter2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmoothingRecursiveGaussianImageFilter2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SmoothingRecursiveGaussianImageFilter2.dir/SmoothingRecursiveGaussianImageFilter2.cxx.o -o ../../bin/SmoothingRecursiveGaussianImageFilter2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target SmoothingRecursiveGaussianImageFilter2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter4.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter4.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ResampleImageFilter4.dir/DependInfo.cmake --color= Scanning dependencies of target ResampleImageFilter4 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ResampleImageFilter4.dir/build.make Examples/Filtering/CMakeFiles/ResampleImageFilter4.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/ResampleImageFilter4.dir/ResampleImageFilter4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkMetaDataObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkMetaDataObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkNumericTraitsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/OtsuMultipleThresholdImageFilter.dir/OtsuMultipleThresholdImageFilter.cxx.o -c /<>/Examples/Filtering/OtsuMultipleThresholdImageFilter.cxx In file included from /<>/Examples/Filtering/OtsuMultipleThresholdImageFilter.cxx:31: In file included from /<>/Modules/Filtering/Thresholding/include/itkOtsuMultipleThresholdsCalculator.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/OtsuMultipleThresholdImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/OtsuMultipleThresholdImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/OtsuMultipleThresholdImageFilter.dir/OtsuMultipleThresholdImageFilter.cxx.o -o ../../bin/OtsuMultipleThresholdImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target OtsuMultipleThresholdImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ScaleSpaceGenerator2D.dir/build.make Examples/Filtering/CMakeFiles/ScaleSpaceGenerator2D.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ScaleSpaceGenerator2D.dir/DependInfo.cmake --color= Scanning dependencies of target ScaleSpaceGenerator2D make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ScaleSpaceGenerator2D.dir/build.make Examples/Filtering/CMakeFiles/ScaleSpaceGenerator2D.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/ScaleSpaceGenerator2D.dir/ScaleSpaceGenerator2D.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ResampleImageFilter3.dir/ResampleImageFilter3.cxx.o -c /<>/Examples/Filtering/ResampleImageFilter3.cxx In file included from /<>/Examples/Filtering/ResampleImageFilter3.cxx:77: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ResampleImageFilter3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/VectorGradientAnisotropicDiffusionImageFilter.dir/VectorGradientAnisotropicDiffusionImageFilter.cxx.o -c /<>/Examples/Filtering/VectorGradientAnisotropicDiffusionImageFilter.cxx In file included from /<>/Examples/Filtering/VectorGradientAnisotropicDiffusionImageFilter.cxx:41: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/VectorGradientAnisotropicDiffusionImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleImageFilter3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleImageFilter3.dir/ResampleImageFilter3.cxx.o -o ../../bin/ResampleImageFilter3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ResampleImageFilter3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/CompositeFilterExample.dir/build.make Examples/Filtering/CMakeFiles/CompositeFilterExample.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/CompositeFilterExample.dir/DependInfo.cmake --color= Scanning dependencies of target CompositeFilterExample make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/CompositeFilterExample.dir/build.make Examples/Filtering/CMakeFiles/CompositeFilterExample.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/CompositeFilterExample.dir/CompositeFilterExample.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/VectorGradientAnisotropicDiffusionImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/VectorGradientAnisotropicDiffusionImageFilter.dir/VectorGradientAnisotropicDiffusionImageFilter.cxx.o -o ../../bin/VectorGradientAnisotropicDiffusionImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target VectorGradientAnisotropicDiffusionImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/DanielssonDistanceMapImageFilter.dir/build.make Examples/Filtering/CMakeFiles/DanielssonDistanceMapImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/DanielssonDistanceMapImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target DanielssonDistanceMapImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/DanielssonDistanceMapImageFilter.dir/build.make Examples/Filtering/CMakeFiles/DanielssonDistanceMapImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/DanielssonDistanceMapImageFilter.dir/DanielssonDistanceMapImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SubsampleVolume.dir/SubsampleVolume.cxx.o -c /<>/Examples/Filtering/SubsampleVolume.cxx In file included from /<>/Examples/Filtering/SubsampleVolume.cxx:31: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/SubsampleVolume make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubsampleVolume.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SubsampleVolume.dir/SubsampleVolume.cxx.o -o ../../bin/SubsampleVolume -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target SubsampleVolume make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SurfaceExtraction.dir/build.make Examples/Filtering/CMakeFiles/SurfaceExtraction.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/SurfaceExtraction.dir/DependInfo.cmake --color= Scanning dependencies of target SurfaceExtraction make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SurfaceExtraction.dir/build.make Examples/Filtering/CMakeFiles/SurfaceExtraction.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/SurfaceExtraction.dir/SurfaceExtraction.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ResampleImageFilter4.dir/ResampleImageFilter4.cxx.o -c /<>/Examples/Filtering/ResampleImageFilter4.cxx In file included from /<>/Examples/Filtering/ResampleImageFilter4.cxx:35: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ResampleImageFilter4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ScaleSpaceGenerator2D.dir/ScaleSpaceGenerator2D.cxx.o -c /<>/Examples/Filtering/ScaleSpaceGenerator2D.cxx In file included from /<>/Examples/Filtering/ScaleSpaceGenerator2D.cxx:28: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ScaleSpaceGenerator2D make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResampleImageFilter4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ResampleImageFilter4.dir/ResampleImageFilter4.cxx.o -o ../../bin/ResampleImageFilter4 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ResampleImageFilter4 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/VotingBinaryHoleFillingImageFilter.dir/build.make Examples/Filtering/CMakeFiles/VotingBinaryHoleFillingImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScaleSpaceGenerator2D.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ScaleSpaceGenerator2D.dir/ScaleSpaceGenerator2D.cxx.o -o ../../bin/ScaleSpaceGenerator2D -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ScaleSpaceGenerator2D make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SpatialObjectToImage3.dir/build.make Examples/Filtering/CMakeFiles/SpatialObjectToImage3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/VotingBinaryHoleFillingImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target VotingBinaryHoleFillingImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/VotingBinaryHoleFillingImageFilter.dir/build.make Examples/Filtering/CMakeFiles/VotingBinaryHoleFillingImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/VotingBinaryHoleFillingImageFilter.dir/VotingBinaryHoleFillingImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/SpatialObjectToImage3.dir/DependInfo.cmake --color= Scanning dependencies of target SpatialObjectToImage3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SpatialObjectToImage3.dir/build.make Examples/Filtering/CMakeFiles/SpatialObjectToImage3.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/SpatialObjectToImage3.dir/SpatialObjectToImage3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CompositeFilterExample.dir/CompositeFilterExample.cxx.o -c /<>/Examples/Filtering/CompositeFilterExample.cxx In file included from /<>/Examples/Filtering/CompositeFilterExample.cxx:40: In file included from /<>/Modules/Filtering/ImageGradient/include/itkGradientMagnitudeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/CompositeFilterExample make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/CompositeFilterExample.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CompositeFilterExample.dir/CompositeFilterExample.cxx.o -o ../../bin/CompositeFilterExample -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target CompositeFilterExample make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/RGBToGrayscale.dir/build.make Examples/Filtering/CMakeFiles/RGBToGrayscale.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/RGBToGrayscale.dir/DependInfo.cmake --color= Scanning dependencies of target RGBToGrayscale make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/RGBToGrayscale.dir/build.make Examples/Filtering/CMakeFiles/RGBToGrayscale.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/RGBToGrayscale.dir/RGBToGrayscale.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SurfaceExtraction.dir/SurfaceExtraction.cxx.o -c /<>/Examples/Filtering/SurfaceExtraction.cxx In file included from /<>/Examples/Filtering/SurfaceExtraction.cxx:40: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/SurfaceExtraction make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DanielssonDistanceMapImageFilter.dir/DanielssonDistanceMapImageFilter.cxx.o -c /<>/Examples/Filtering/DanielssonDistanceMapImageFilter.cxx In file included from /<>/Examples/Filtering/DanielssonDistanceMapImageFilter.cxx:46: In file included from /<>/Modules/Filtering/DistanceMap/include/itkDanielssonDistanceMapImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/DanielssonDistanceMapImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/SurfaceExtraction.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SurfaceExtraction.dir/SurfaceExtraction.cxx.o -o ../../bin/SurfaceExtraction -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target SurfaceExtraction make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SpatialObjectToImage1.dir/build.make Examples/Filtering/CMakeFiles/SpatialObjectToImage1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/SpatialObjectToImage1.dir/DependInfo.cmake --color= Scanning dependencies of target SpatialObjectToImage1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SpatialObjectToImage1.dir/build.make Examples/Filtering/CMakeFiles/SpatialObjectToImage1.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/SpatialObjectToImage1.dir/SpatialObjectToImage1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/DanielssonDistanceMapImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DanielssonDistanceMapImageFilter.dir/DanielssonDistanceMapImageFilter.cxx.o -o ../../bin/DanielssonDistanceMapImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target DanielssonDistanceMapImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/VectorIndexSelection.dir/build.make Examples/Filtering/CMakeFiles/VectorIndexSelection.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/VectorIndexSelection.dir/DependInfo.cmake --color= Scanning dependencies of target VectorIndexSelection make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/VectorIndexSelection.dir/build.make Examples/Filtering/CMakeFiles/VectorIndexSelection.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/VectorIndexSelection.dir/VectorIndexSelection.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/VotingBinaryHoleFillingImageFilter.dir/VotingBinaryHoleFillingImageFilter.cxx.o -c /<>/Examples/Filtering/VotingBinaryHoleFillingImageFilter.cxx In file included from /<>/Examples/Filtering/VotingBinaryHoleFillingImageFilter.cxx:49: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/VotingBinaryHoleFillingImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/VotingBinaryHoleFillingImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/VotingBinaryHoleFillingImageFilter.dir/VotingBinaryHoleFillingImageFilter.cxx.o -o ../../bin/VotingBinaryHoleFillingImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target VotingBinaryHoleFillingImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SpatialObjectToImage2.dir/build.make Examples/Filtering/CMakeFiles/SpatialObjectToImage2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SpatialObjectToImage3.dir/SpatialObjectToImage3.cxx.o -c /<>/Examples/Filtering/SpatialObjectToImage3.cxx In file included from /<>/Examples/Filtering/SpatialObjectToImage3.cxx:39: In file included from /<>/Modules/Core/SpatialObjects/include/itkPolygonSpatialObject.h:20: In file included from /<>/Modules/Core/SpatialObjects/include/itkBlobSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/SpatialObjectToImage2.dir/DependInfo.cmake --color= Scanning dependencies of target SpatialObjectToImage2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/SpatialObjectToImage2.dir/build.make Examples/Filtering/CMakeFiles/SpatialObjectToImage2.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/SpatialObjectToImage3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/SpatialObjectToImage2.dir/SpatialObjectToImage2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/RGBToGrayscale.dir/RGBToGrayscale.cxx.o -c /<>/Examples/Filtering/RGBToGrayscale.cxx In file included from /<>/Examples/Filtering/RGBToGrayscale.cxx:38: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkRGBToLuminanceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/RGBToGrayscale make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpatialObjectToImage3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SpatialObjectToImage3.dir/SpatialObjectToImage3.cxx.o -o ../../bin/SpatialObjectToImage3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target SpatialObjectToImage3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GradientRecursiveGaussianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/GradientRecursiveGaussianImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/GradientRecursiveGaussianImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target GradientRecursiveGaussianImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/GradientRecursiveGaussianImageFilter.dir/build.make Examples/Filtering/CMakeFiles/GradientRecursiveGaussianImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/GradientRecursiveGaussianImageFilter.dir/GradientRecursiveGaussianImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGBToGrayscale.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/RGBToGrayscale.dir/RGBToGrayscale.cxx.o -o ../../bin/RGBToGrayscale -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target RGBToGrayscale make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/LaplacianSharpeningImageFilter.dir/build.make Examples/Filtering/CMakeFiles/LaplacianSharpeningImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/LaplacianSharpeningImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target LaplacianSharpeningImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/LaplacianSharpeningImageFilter.dir/build.make Examples/Filtering/CMakeFiles/LaplacianSharpeningImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/LaplacianSharpeningImageFilter.dir/LaplacianSharpeningImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/VectorIndexSelection.dir/VectorIndexSelection.cxx.o -c /<>/Examples/Filtering/VectorIndexSelection.cxx In file included from /<>/Examples/Filtering/VectorIndexSelection.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/VectorIndexSelection make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/VectorIndexSelection.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/VectorIndexSelection.dir/VectorIndexSelection.cxx.o -o ../../bin/VectorIndexSelection -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target VectorIndexSelection make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/VotingBinaryIterativeHoleFillingImageFilter.dir/build.make Examples/Filtering/CMakeFiles/VotingBinaryIterativeHoleFillingImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/VotingBinaryIterativeHoleFillingImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target VotingBinaryIterativeHoleFillingImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/VotingBinaryIterativeHoleFillingImageFilter.dir/build.make Examples/Filtering/CMakeFiles/VotingBinaryIterativeHoleFillingImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/VotingBinaryIterativeHoleFillingImageFilter.dir/VotingBinaryIterativeHoleFillingImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SpatialObjectToImage1.dir/SpatialObjectToImage1.cxx.o -c /<>/Examples/Filtering/SpatialObjectToImage1.cxx In file included from /<>/Examples/Filtering/SpatialObjectToImage1.cxx:41: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectToImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/SpatialObjectToImage1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpatialObjectToImage1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SpatialObjectToImage1.dir/SpatialObjectToImage1.cxx.o -o ../../bin/SpatialObjectToImage1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target SpatialObjectToImage1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/FFTDirectInverse.dir/build.make Examples/Filtering/CMakeFiles/FFTDirectInverse.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/FFTDirectInverse.dir/DependInfo.cmake --color= Scanning dependencies of target FFTDirectInverse make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/FFTDirectInverse.dir/build.make Examples/Filtering/CMakeFiles/FFTDirectInverse.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/FFTDirectInverse.dir/FFTDirectInverse.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SpatialObjectToImage2.dir/SpatialObjectToImage2.cxx.o -c /<>/Examples/Filtering/SpatialObjectToImage2.cxx In file included from /<>/Examples/Filtering/SpatialObjectToImage2.cxx:44: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectToImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/SpatialObjectToImage2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpatialObjectToImage2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SpatialObjectToImage2.dir/SpatialObjectToImage2.cxx.o -o ../../bin/SpatialObjectToImage2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target SpatialObjectToImage2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/VesselnessMeasureImageFilter.dir/build.make Examples/Filtering/CMakeFiles/VesselnessMeasureImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/VesselnessMeasureImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target VesselnessMeasureImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/VesselnessMeasureImageFilter.dir/build.make Examples/Filtering/CMakeFiles/VesselnessMeasureImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/VesselnessMeasureImageFilter.dir/VesselnessMeasureImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GradientRecursiveGaussianImageFilter.dir/GradientRecursiveGaussianImageFilter.cxx.o -c /<>/Examples/Filtering/GradientRecursiveGaussianImageFilter.cxx In file included from /<>/Examples/Filtering/GradientRecursiveGaussianImageFilter.cxx:28: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/GradientRecursiveGaussianImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/GradientRecursiveGaussianImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GradientRecursiveGaussianImageFilter.dir/GradientRecursiveGaussianImageFilter.cxx.o -o ../../bin/GradientRecursiveGaussianImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target GradientRecursiveGaussianImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/DiffusionTensor3DReconstructionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/DiffusionTensor3DReconstructionImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/DiffusionTensor3DReconstructionImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target DiffusionTensor3DReconstructionImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/DiffusionTensor3DReconstructionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/DiffusionTensor3DReconstructionImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/DiffusionTensor3DReconstructionImageFilter.dir/DiffusionTensor3DReconstructionImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/LaplacianSharpeningImageFilter.dir/LaplacianSharpeningImageFilter.cxx.o -c /<>/Examples/Filtering/LaplacianSharpeningImageFilter.cxx In file included from /<>/Examples/Filtering/LaplacianSharpeningImageFilter.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkLaplacianSharpeningImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/LaplacianSharpeningImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/LaplacianSharpeningImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/LaplacianSharpeningImageFilter.dir/LaplacianSharpeningImageFilter.cxx.o -o ../../bin/LaplacianSharpeningImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target LaplacianSharpeningImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ZeroCrossingBasedEdgeDetectionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/ZeroCrossingBasedEdgeDetectionImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/ZeroCrossingBasedEdgeDetectionImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target ZeroCrossingBasedEdgeDetectionImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/ZeroCrossingBasedEdgeDetectionImageFilter.dir/build.make Examples/Filtering/CMakeFiles/ZeroCrossingBasedEdgeDetectionImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/ZeroCrossingBasedEdgeDetectionImageFilter.dir/ZeroCrossingBasedEdgeDetectionImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/VotingBinaryIterativeHoleFillingImageFilter.dir/VotingBinaryIterativeHoleFillingImageFilter.cxx.o -c /<>/Examples/Filtering/VotingBinaryIterativeHoleFillingImageFilter.cxx In file included from /<>/Examples/Filtering/VotingBinaryIterativeHoleFillingImageFilter.cxx:51: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/VotingBinaryIterativeHoleFillingImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/VotingBinaryIterativeHoleFillingImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/VotingBinaryIterativeHoleFillingImageFilter.dir/VotingBinaryIterativeHoleFillingImageFilter.cxx.o -o ../../bin/VotingBinaryIterativeHoleFillingImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target VotingBinaryIterativeHoleFillingImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/WarpImageFilter1.dir/build.make Examples/Filtering/CMakeFiles/WarpImageFilter1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/WarpImageFilter1.dir/DependInfo.cmake --color= Scanning dependencies of target WarpImageFilter1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/WarpImageFilter1.dir/build.make Examples/Filtering/CMakeFiles/WarpImageFilter1.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/WarpImageFilter1.dir/WarpImageFilter1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/FFTDirectInverse.dir/FFTDirectInverse.cxx.o -c /<>/Examples/Filtering/FFTDirectInverse.cxx In file included from /<>/Examples/Filtering/FFTDirectInverse.cxx:34: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/FFTDirectInverse make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/VesselnessMeasureImageFilter.dir/VesselnessMeasureImageFilter.cxx.o -c /<>/Examples/Filtering/VesselnessMeasureImageFilter.cxx In file included from /<>/Examples/Filtering/VesselnessMeasureImageFilter.cxx:24: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHessian3DToVesselnessMeasureImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/VesselnessMeasureImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/FFTDirectInverse.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/FFTDirectInverse.dir/FFTDirectInverse.cxx.o -o ../../bin/FFTDirectInverse -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target FFTDirectInverse make[2]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/DigitallyReconstructedRadiograph1.dir/build.make Examples/Filtering/CMakeFiles/DigitallyReconstructedRadiograph1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/VesselnessMeasureImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/VesselnessMeasureImageFilter.dir/VesselnessMeasureImageFilter.cxx.o -o ../../bin/VesselnessMeasureImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Filtering /<>/BUILD /<>/BUILD/Examples/Filtering /<>/BUILD/Examples/Filtering/CMakeFiles/DigitallyReconstructedRadiograph1.dir/DependInfo.cmake --color= Scanning dependencies of target DigitallyReconstructedRadiograph1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Filtering/CMakeFiles/DigitallyReconstructedRadiograph1.dir/build.make Examples/Filtering/CMakeFiles/DigitallyReconstructedRadiograph1.dir/build make[2]: Entering directory '/<>/BUILD' [ 78%] Built target VesselnessMeasureImageFilter make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkExtractImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkExtractImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkMinimumMaximumImageCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkMinimumMaximumImageCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadDicomSeriesWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadDicomSeriesWrite.dir/depend make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/Filtering/CMakeFiles/DigitallyReconstructedRadiograph1.dir/DigitallyReconstructedRadiograph1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkOptimizerParametersPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkPointSetPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/ImageReadDicomSeriesWrite.dir/DependInfo.cmake --color= Scanning dependencies of target ImageReadDicomSeriesWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadDicomSeriesWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadDicomSeriesWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/ImageReadDicomSeriesWrite.dir/ImageReadDicomSeriesWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DiffusionTensor3DReconstructionImageFilter.dir/DiffusionTensor3DReconstructionImageFilter.cxx.o -c /<>/Examples/Filtering/DiffusionTensor3DReconstructionImageFilter.cxx In file included from /<>/Examples/Filtering/DiffusionTensor3DReconstructionImageFilter.cxx:54: In file included from /<>/Modules/Filtering/DiffusionTensorImage/include/itkDiffusionTensor3DReconstructionImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/DiffusionTensor3DReconstructionImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/DiffusionTensor3DReconstructionImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DiffusionTensor3DReconstructionImageFilter.dir/DiffusionTensor3DReconstructionImageFilter.cxx.o -o ../../bin/DiffusionTensor3DReconstructionImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target DiffusionTensor3DReconstructionImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadExportVTK.dir/build.make Examples/IO/CMakeFiles/ImageReadExportVTK.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/ImageReadExportVTK.dir/DependInfo.cmake --color= Scanning dependencies of target ImageReadExportVTK make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadExportVTK.dir/build.make Examples/IO/CMakeFiles/ImageReadExportVTK.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/ImageReadExportVTK.dir/ImageReadExportVTK.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ZeroCrossingBasedEdgeDetectionImageFilter.dir/ZeroCrossingBasedEdgeDetectionImageFilter.cxx.o -c /<>/Examples/Filtering/ZeroCrossingBasedEdgeDetectionImageFilter.cxx In file included from /<>/Examples/Filtering/ZeroCrossingBasedEdgeDetectionImageFilter.cxx:36: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ZeroCrossingBasedEdgeDetectionImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ZeroCrossingBasedEdgeDetectionImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ZeroCrossingBasedEdgeDetectionImageFilter.dir/ZeroCrossingBasedEdgeDetectionImageFilter.cxx.o -o ../../bin/ZeroCrossingBasedEdgeDetectionImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ZeroCrossingBasedEdgeDetectionImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/RGBImageSeriesReadWrite.dir/build.make Examples/IO/CMakeFiles/RGBImageSeriesReadWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/RGBImageSeriesReadWrite.dir/DependInfo.cmake --color= Scanning dependencies of target RGBImageSeriesReadWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/RGBImageSeriesReadWrite.dir/build.make Examples/IO/CMakeFiles/RGBImageSeriesReadWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/RGBImageSeriesReadWrite.dir/RGBImageSeriesReadWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkOptimizerParametersPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkOptimizerParametersPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkSimpleDataObjectDecoratorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/WarpImageFilter1.dir/WarpImageFilter1.cxx.o -c /<>/Examples/Filtering/WarpImageFilter1.cxx In file included from /<>/Examples/Filtering/WarpImageFilter1.cxx:30: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/WarpImageFilter1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/WarpImageFilter1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/WarpImageFilter1.dir/WarpImageFilter1.cxx.o -o ../../bin/WarpImageFilter1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target WarpImageFilter1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ComplexImageReadWrite.dir/build.make Examples/IO/CMakeFiles/ComplexImageReadWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/ComplexImageReadWrite.dir/DependInfo.cmake --color= Scanning dependencies of target ComplexImageReadWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ComplexImageReadWrite.dir/build.make Examples/IO/CMakeFiles/ComplexImageReadWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/ComplexImageReadWrite.dir/ComplexImageReadWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkNumericTraitsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkNumericTraitsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkSpatialFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageReadExportVTK.dir/ImageReadExportVTK.cxx.o -c /<>/Examples/IO/ImageReadExportVTK.cxx In file included from /<>/Examples/IO/ImageReadExportVTK.cxx:43: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ImageReadExportVTK make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkSpatialFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkSpatialFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkSpatialOrientationPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageReadExportVTK.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageReadExportVTK.dir/ImageReadExportVTK.cxx.o -o ../../bin/ImageReadExportVTK -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ImageReadExportVTK make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/VectorImageReadWrite.dir/build.make Examples/IO/CMakeFiles/VectorImageReadWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/VectorImageReadWrite.dir/DependInfo.cmake --color= Scanning dependencies of target VectorImageReadWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/VectorImageReadWrite.dir/build.make Examples/IO/CMakeFiles/VectorImageReadWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/VectorImageReadWrite.dir/VectorImageReadWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageReadDicomSeriesWrite.dir/ImageReadDicomSeriesWrite.cxx.o -c /<>/Examples/IO/ImageReadDicomSeriesWrite.cxx In file included from /<>/Examples/IO/ImageReadDicomSeriesWrite.cxx:19: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIO.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ImageReadDicomSeriesWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageReadDicomSeriesWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageReadDicomSeriesWrite.dir/ImageReadDicomSeriesWrite.cxx.o -o ../../bin/ImageReadDicomSeriesWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ImageReadDicomSeriesWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomSeriesReadGaussianImageWrite.dir/build.make Examples/IO/CMakeFiles/DicomSeriesReadGaussianImageWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/DicomSeriesReadGaussianImageWrite.dir/DependInfo.cmake --color= Scanning dependencies of target DicomSeriesReadGaussianImageWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomSeriesReadGaussianImageWrite.dir/build.make Examples/IO/CMakeFiles/DicomSeriesReadGaussianImageWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/DicomSeriesReadGaussianImageWrite.dir/DicomSeriesReadGaussianImageWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkSpatialOrientationPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkSpatialOrientationPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Wrapping/Modules/ITKCommon/CMakeFiles/ITKCommonPython.dir/itkStreamingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ComplexImageReadWrite.dir/ComplexImageReadWrite.cxx.o -c /<>/Examples/IO/ComplexImageReadWrite.cxx In file included from /<>/Examples/IO/ComplexImageReadWrite.cxx:41: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ComplexImageReadWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkSimpleDataObjectDecoratorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkSimpleDataObjectDecoratorPython.cpp make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/TransformReadWrite.dir/build.make Examples/IO/CMakeFiles/TransformReadWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/RGBImageSeriesReadWrite.dir/RGBImageSeriesReadWrite.cxx.o -c /<>/Examples/IO/RGBImageSeriesReadWrite.cxx In file included from /<>/Examples/IO/RGBImageSeriesReadWrite.cxx:37: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/TransformReadWrite.dir/DependInfo.cmake --color= Scanning dependencies of target TransformReadWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/TransformReadWrite.dir/build.make Examples/IO/CMakeFiles/TransformReadWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/RGBImageSeriesReadWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/TransformReadWrite.dir/TransformReadWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ComplexImageReadWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ComplexImageReadWrite.dir/ComplexImageReadWrite.cxx.o -o ../../bin/ComplexImageReadWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ComplexImageReadWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/ImageReadWrite.dir/DependInfo.cmake --color= Scanning dependencies of target ImageReadWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadWrite.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGBImageSeriesReadWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/RGBImageSeriesReadWrite.dir/RGBImageSeriesReadWrite.cxx.o -o ../../bin/RGBImageSeriesReadWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target RGBImageSeriesReadWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageSeriesReadWrite.dir/build.make Examples/IO/CMakeFiles/ImageSeriesReadWrite.dir/depend make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/ImageReadWrite.dir/ImageReadWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/ImageSeriesReadWrite.dir/DependInfo.cmake --color= Scanning dependencies of target ImageSeriesReadWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageSeriesReadWrite.dir/build.make Examples/IO/CMakeFiles/ImageSeriesReadWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/ImageSeriesReadWrite.dir/ImageSeriesReadWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DigitallyReconstructedRadiograph1.dir/DigitallyReconstructedRadiograph1.cxx.o -c /<>/Examples/Filtering/DigitallyReconstructedRadiograph1.cxx In file included from /<>/Examples/Filtering/DigitallyReconstructedRadiograph1.cxx:29: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Examples/Filtering/DigitallyReconstructedRadiograph1.cxx:33: In file included from /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkCenteredEuler3DTransform.h:38:10: note: in instantiation of template class 'itk::Euler3DTransform' requested here public Euler3DTransform ^ /<>/Examples/Filtering/DigitallyReconstructedRadiograph1.cxx:475:3: note: in instantiation of template class 'itk::CenteredEuler3DTransform' requested here TransformType::Pointer transform = TransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/DigitallyReconstructedRadiograph1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Filtering && /usr/bin/cmake -E cmake_link_script CMakeFiles/DigitallyReconstructedRadiograph1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DigitallyReconstructedRadiograph1.dir/DigitallyReconstructedRadiograph1.cxx.o -o ../../bin/DigitallyReconstructedRadiograph1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target DigitallyReconstructedRadiograph1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomSeriesReadImageWrite2.dir/build.make Examples/IO/CMakeFiles/DicomSeriesReadImageWrite2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/DicomSeriesReadImageWrite2.dir/DependInfo.cmake --color= Scanning dependencies of target DicomSeriesReadImageWrite2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomSeriesReadImageWrite2.dir/build.make Examples/IO/CMakeFiles/DicomSeriesReadImageWrite2.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/DicomSeriesReadImageWrite2.dir/DicomSeriesReadImageWrite2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/VectorImageReadWrite.dir/VectorImageReadWrite.cxx.o -c /<>/Examples/IO/VectorImageReadWrite.cxx In file included from /<>/Examples/IO/VectorImageReadWrite.cxx:39: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/VectorImageReadWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/VectorImageReadWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/VectorImageReadWrite.dir/VectorImageReadWrite.cxx.o -o ../../bin/VectorImageReadWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target VectorImageReadWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadCastWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadCastWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/ImageReadCastWrite.dir/DependInfo.cmake --color= Scanning dependencies of target ImageReadCastWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadCastWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadCastWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/ImageReadCastWrite.dir/ImageReadCastWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageReadWrite.dir/ImageReadWrite.cxx.o -c /<>/Examples/IO/ImageReadWrite.cxx In file included from /<>/Examples/IO/ImageReadWrite.cxx:45: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ImageReadWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageReadWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageReadWrite.dir/ImageReadWrite.cxx.o -o ../../bin/ImageReadWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ImageReadWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomSeriesReadPrintTags.dir/build.make Examples/IO/CMakeFiles/DicomSeriesReadPrintTags.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/DicomSeriesReadPrintTags.dir/DependInfo.cmake --color= Scanning dependencies of target DicomSeriesReadPrintTags make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomSeriesReadPrintTags.dir/build.make Examples/IO/CMakeFiles/DicomSeriesReadPrintTags.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/DicomSeriesReadPrintTags.dir/DicomSeriesReadPrintTags.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageSeriesReadWrite.dir/ImageSeriesReadWrite.cxx.o -c /<>/Examples/IO/ImageSeriesReadWrite.cxx In file included from /<>/Examples/IO/ImageSeriesReadWrite.cxx:39: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ImageSeriesReadWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageSeriesReadWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageSeriesReadWrite.dir/ImageSeriesReadWrite.cxx.o -o ../../bin/ImageSeriesReadWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ImageSeriesReadWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageSeriesReadWrite2.dir/build.make Examples/IO/CMakeFiles/ImageSeriesReadWrite2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/ImageSeriesReadWrite2.dir/DependInfo.cmake --color= Scanning dependencies of target ImageSeriesReadWrite2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageSeriesReadWrite2.dir/build.make Examples/IO/CMakeFiles/ImageSeriesReadWrite2.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/ImageSeriesReadWrite2.dir/ImageSeriesReadWrite2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DicomSeriesReadGaussianImageWrite.dir/DicomSeriesReadGaussianImageWrite.cxx.o -c /<>/Examples/IO/DicomSeriesReadGaussianImageWrite.cxx In file included from /<>/Examples/IO/DicomSeriesReadGaussianImageWrite.cxx:19: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIO.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/DicomSeriesReadGaussianImageWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DicomSeriesReadImageWrite2.dir/DicomSeriesReadImageWrite2.cxx.o -c /<>/Examples/IO/DicomSeriesReadImageWrite2.cxx In file included from /<>/Examples/IO/DicomSeriesReadImageWrite2.cxx:46: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/DicomSeriesReadImageWrite2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/DicomSeriesReadGaussianImageWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DicomSeriesReadGaussianImageWrite.dir/DicomSeriesReadGaussianImageWrite.cxx.o -o ../../bin/DicomSeriesReadGaussianImageWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target DicomSeriesReadGaussianImageWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadExtractFilterInsertWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadExtractFilterInsertWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/ImageReadExtractFilterInsertWrite.dir/DependInfo.cmake --color= Scanning dependencies of target ImageReadExtractFilterInsertWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadExtractFilterInsertWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadExtractFilterInsertWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/ImageReadExtractFilterInsertWrite.dir/ImageReadExtractFilterInsertWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/DicomSeriesReadImageWrite2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DicomSeriesReadImageWrite2.dir/DicomSeriesReadImageWrite2.cxx.o -o ../../bin/DicomSeriesReadImageWrite2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target DicomSeriesReadImageWrite2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/RGBImageReadWrite.dir/build.make Examples/IO/CMakeFiles/RGBImageReadWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/RGBImageReadWrite.dir/DependInfo.cmake --color= Scanning dependencies of target RGBImageReadWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/RGBImageReadWrite.dir/build.make Examples/IO/CMakeFiles/RGBImageReadWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/RGBImageReadWrite.dir/RGBImageReadWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageReadCastWrite.dir/ImageReadCastWrite.cxx.o -c /<>/Examples/IO/ImageReadCastWrite.cxx In file included from /<>/Examples/IO/ImageReadCastWrite.cxx:40: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ImageReadCastWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageReadCastWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageReadCastWrite.dir/ImageReadCastWrite.cxx.o -o ../../bin/ImageReadCastWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ImageReadCastWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/CovariantVectorImageRead.dir/build.make Examples/IO/CMakeFiles/CovariantVectorImageRead.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/TransformReadWrite.dir/TransformReadWrite.cxx.o -c /<>/Examples/IO/TransformReadWrite.cxx In file included from /<>/Examples/IO/TransformReadWrite.cxx:31: In file included from /<>/Modules/IO/TransformBase/include/itkTransformFileReader.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/TransformReadWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/CovariantVectorImageRead.dir/DependInfo.cmake --color= Scanning dependencies of target CovariantVectorImageRead make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/CovariantVectorImageRead.dir/build.make Examples/IO/CMakeFiles/CovariantVectorImageRead.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/CovariantVectorImageRead.dir/CovariantVectorImageRead.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/TransformReadWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/TransformReadWrite.dir/TransformReadWrite.cxx.o -o ../../bin/TransformReadWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target TransformReadWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomImageReadPrintTags.dir/build.make Examples/IO/CMakeFiles/DicomImageReadPrintTags.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/DicomImageReadPrintTags.dir/DependInfo.cmake --color= Scanning dependencies of target DicomImageReadPrintTags make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomImageReadPrintTags.dir/build.make Examples/IO/CMakeFiles/DicomImageReadPrintTags.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/DicomImageReadPrintTags.dir/DicomImageReadPrintTags.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DicomSeriesReadPrintTags.dir/DicomSeriesReadPrintTags.cxx.o -c /<>/Examples/IO/DicomSeriesReadPrintTags.cxx In file included from /<>/Examples/IO/DicomSeriesReadPrintTags.cxx:38: In file included from /<>/Modules/IO/ImageBase/include/itkImageSeriesReader.h:26: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/DicomSeriesReadPrintTags make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/DicomSeriesReadPrintTags.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DicomSeriesReadPrintTags.dir/DicomSeriesReadPrintTags.cxx.o -o ../../bin/DicomSeriesReadPrintTags -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target DicomSeriesReadPrintTags make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomPrintPatientInformation.dir/build.make Examples/IO/CMakeFiles/DicomPrintPatientInformation.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/DicomPrintPatientInformation.dir/DependInfo.cmake --color= Scanning dependencies of target DicomPrintPatientInformation make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomPrintPatientInformation.dir/build.make Examples/IO/CMakeFiles/DicomPrintPatientInformation.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/DicomPrintPatientInformation.dir/DicomPrintPatientInformation.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageSeriesReadWrite2.dir/ImageSeriesReadWrite2.cxx.o -c /<>/Examples/IO/ImageSeriesReadWrite2.cxx In file included from /<>/Examples/IO/ImageSeriesReadWrite2.cxx:71: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ImageSeriesReadWrite2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageSeriesReadWrite2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageSeriesReadWrite2.dir/ImageSeriesReadWrite2.cxx.o -o ../../bin/ImageSeriesReadWrite2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ImageSeriesReadWrite2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomImageReadChangeHeaderWrite.dir/build.make Examples/IO/CMakeFiles/DicomImageReadChangeHeaderWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/DicomImageReadChangeHeaderWrite.dir/DependInfo.cmake --color= Scanning dependencies of target DicomImageReadChangeHeaderWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomImageReadChangeHeaderWrite.dir/build.make Examples/IO/CMakeFiles/DicomImageReadChangeHeaderWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/DicomImageReadChangeHeaderWrite.dir/DicomImageReadChangeHeaderWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/RGBImageReadWrite.dir/RGBImageReadWrite.cxx.o -c /<>/Examples/IO/RGBImageReadWrite.cxx In file included from /<>/Examples/IO/RGBImageReadWrite.cxx:34: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/RGBImageReadWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGBImageReadWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/RGBImageReadWrite.dir/RGBImageReadWrite.cxx.o -o ../../bin/RGBImageReadWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target RGBImageReadWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomSeriesReadSeriesWrite.dir/build.make Examples/IO/CMakeFiles/DicomSeriesReadSeriesWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/DicomSeriesReadSeriesWrite.dir/DependInfo.cmake --color= Scanning dependencies of target DicomSeriesReadSeriesWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomSeriesReadSeriesWrite.dir/build.make Examples/IO/CMakeFiles/DicomSeriesReadSeriesWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/DicomSeriesReadSeriesWrite.dir/DicomSeriesReadSeriesWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DicomImageReadPrintTags.dir/DicomImageReadPrintTags.cxx.o -c /<>/Examples/IO/DicomImageReadPrintTags.cxx In file included from /<>/Examples/IO/DicomImageReadPrintTags.cxx:49: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/DicomImageReadPrintTags make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/DicomImageReadPrintTags.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DicomImageReadPrintTags.dir/DicomImageReadPrintTags.cxx.o -o ../../bin/DicomImageReadPrintTags -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target DicomImageReadPrintTags make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/IOFactoryRegistration.dir/build.make Examples/IO/CMakeFiles/IOFactoryRegistration.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/IOFactoryRegistration.dir/DependInfo.cmake --color= Scanning dependencies of target IOFactoryRegistration make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/IOFactoryRegistration.dir/build.make Examples/IO/CMakeFiles/IOFactoryRegistration.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/IOFactoryRegistration.dir/IOFactoryRegistration.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageReadExtractFilterInsertWrite.dir/ImageReadExtractFilterInsertWrite.cxx.o -c /<>/Examples/IO/ImageReadExtractFilterInsertWrite.cxx In file included from /<>/Examples/IO/ImageReadExtractFilterInsertWrite.cxx:29: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/ImageReadExtractFilterInsertWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageReadExtractFilterInsertWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageReadExtractFilterInsertWrite.dir/ImageReadExtractFilterInsertWrite.cxx.o -o ../../bin/ImageReadExtractFilterInsertWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target ImageReadExtractFilterInsertWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/VisibleHumanStreamReadWrite.dir/build.make Examples/IO/CMakeFiles/VisibleHumanStreamReadWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/VisibleHumanStreamReadWrite.dir/DependInfo.cmake --color= Scanning dependencies of target VisibleHumanStreamReadWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/VisibleHumanStreamReadWrite.dir/build.make Examples/IO/CMakeFiles/VisibleHumanStreamReadWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/VisibleHumanStreamReadWrite.dir/VisibleHumanStreamReadWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkPointSetPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkPointSetPython.cpp make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/CovariantVectorImageWrite.dir/build.make Examples/IO/CMakeFiles/CovariantVectorImageWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/IOFactoryRegistration.dir/IOFactoryRegistration.cxx.o -c /<>/Examples/IO/IOFactoryRegistration.cxx In file included from /<>/Examples/IO/IOFactoryRegistration.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/IOFactoryRegistration make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/CovariantVectorImageWrite.dir/DependInfo.cmake --color= Scanning dependencies of target CovariantVectorImageWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/CovariantVectorImageWrite.dir/build.make Examples/IO/CMakeFiles/CovariantVectorImageWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/CovariantVectorImageWrite.dir/CovariantVectorImageWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CovariantVectorImageRead.dir/CovariantVectorImageRead.cxx.o -c /<>/Examples/IO/CovariantVectorImageRead.cxx In file included from /<>/Examples/IO/CovariantVectorImageRead.cxx:44: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/CovariantVectorImageRead make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/IOFactoryRegistration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/IOFactoryRegistration.dir/IOFactoryRegistration.cxx.o -o ../../bin/IOFactoryRegistration -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target IOFactoryRegistration make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadRegionOfInterestWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadRegionOfInterestWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DicomPrintPatientInformation.dir/DicomPrintPatientInformation.cxx.o -c /<>/Examples/IO/DicomPrintPatientInformation.cxx In file included from /<>/Examples/IO/DicomPrintPatientInformation.cxx:26: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIO.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 78%] Linking CXX executable ../../bin/DicomPrintPatientInformation make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/ImageReadRegionOfInterestWrite.dir/DependInfo.cmake --color= Scanning dependencies of target ImageReadRegionOfInterestWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadRegionOfInterestWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadRegionOfInterestWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 78%] Building CXX object Examples/IO/CMakeFiles/ImageReadRegionOfInterestWrite.dir/ImageReadRegionOfInterestWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/CovariantVectorImageRead.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CovariantVectorImageRead.dir/CovariantVectorImageRead.cxx.o -o ../../bin/CovariantVectorImageRead -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target CovariantVectorImageRead make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadExtractWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadExtractWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/DicomPrintPatientInformation.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DicomPrintPatientInformation.dir/DicomPrintPatientInformation.cxx.o -o ../../bin/DicomPrintPatientInformation -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 78%] Built target DicomPrintPatientInformation make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/CovariantVectorImageExtractComponent.dir/build.make Examples/IO/CMakeFiles/CovariantVectorImageExtractComponent.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/ImageReadExtractWrite.dir/DependInfo.cmake --color= Scanning dependencies of target ImageReadExtractWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadExtractWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadExtractWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 79%] Building CXX object Examples/IO/CMakeFiles/ImageReadExtractWrite.dir/ImageReadExtractWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/CovariantVectorImageExtractComponent.dir/DependInfo.cmake --color= Scanning dependencies of target CovariantVectorImageExtractComponent make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/CovariantVectorImageExtractComponent.dir/build.make Examples/IO/CMakeFiles/CovariantVectorImageExtractComponent.dir/build make[3]: Entering directory '/<>/BUILD' [ 79%] Building CXX object Examples/IO/CMakeFiles/CovariantVectorImageExtractComponent.dir/CovariantVectorImageExtractComponent.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/c++ -DITKCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKCommonPython.dir/itkStreamingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKCommon/itkStreamingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 79%] Linking CXX shared module ../../../lib/_ITKCommonPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DicomImageReadChangeHeaderWrite.dir/DicomImageReadChangeHeaderWrite.cxx.o -c /<>/Examples/IO/DicomImageReadChangeHeaderWrite.cxx In file included from /<>/Examples/IO/DicomImageReadChangeHeaderWrite.cxx:51: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 79%] Linking CXX executable ../../bin/DicomImageReadChangeHeaderWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/DicomImageReadChangeHeaderWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DicomImageReadChangeHeaderWrite.dir/DicomImageReadChangeHeaderWrite.cxx.o -o ../../bin/DicomImageReadChangeHeaderWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 79%] Built target DicomImageReadChangeHeaderWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomImageReadWrite.dir/build.make Examples/IO/CMakeFiles/DicomImageReadWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/DicomImageReadWrite.dir/DependInfo.cmake --color= Scanning dependencies of target DicomImageReadWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/DicomImageReadWrite.dir/build.make Examples/IO/CMakeFiles/DicomImageReadWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 79%] Building CXX object Examples/IO/CMakeFiles/DicomImageReadWrite.dir/DicomImageReadWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DicomSeriesReadSeriesWrite.dir/DicomSeriesReadSeriesWrite.cxx.o -c /<>/Examples/IO/DicomSeriesReadSeriesWrite.cxx In file included from /<>/Examples/IO/DicomSeriesReadSeriesWrite.cxx:74: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIO.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 79%] Linking CXX executable ../../bin/DicomSeriesReadSeriesWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/DicomSeriesReadSeriesWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DicomSeriesReadSeriesWrite.dir/DicomSeriesReadSeriesWrite.cxx.o -o ../../bin/DicomSeriesReadSeriesWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 79%] Built target DicomSeriesReadSeriesWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/VisibleHumanPasteWrite.dir/build.make Examples/IO/CMakeFiles/VisibleHumanPasteWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/VisibleHumanPasteWrite.dir/DependInfo.cmake --color= Scanning dependencies of target VisibleHumanPasteWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/VisibleHumanPasteWrite.dir/build.make Examples/IO/CMakeFiles/VisibleHumanPasteWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 79%] Building CXX object Examples/IO/CMakeFiles/VisibleHumanPasteWrite.dir/VisibleHumanPasteWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKCommon && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKCommonPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKCommonPython.so CMakeFiles/ITKCommonPython.dir/ITKCommonPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkFixedArrayPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkVectorPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkCovariantVectorPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkPointPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkTriangleHelperPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkVariableSizeMatrixPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkVersorPython.cpp.o CMakeFiles/ITKCommonPython.dir/stdcomplexPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_c_vectorPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_cost_functionPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_diag_matrixPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_file_matrixPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_file_vectorPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_fortran_copyPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_least_squares_functionPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_matrix_fixedPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_matrix_fixed_refPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_matrix_refPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_vector_refPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_matrixPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_vectorPython.cpp.o CMakeFiles/ITKCommonPython.dir/vnl_unary_functionPython.cpp.o CMakeFiles/ITKCommonPython.dir/ITKCommonBasePython.cpp.o CMakeFiles/ITKCommonPython.dir/itkSizePython.cpp.o CMakeFiles/ITKCommonPython.dir/itkOffsetPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkArrayPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkIndexPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkContinuousIndexPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkMatrixPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkVectorContainerPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkMapContainerPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkBoundingBoxPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkRGBPixelPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkRGBAPixelPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkVariableLengthVectorPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkImageRegionPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkSymmetricSecondRankTensorPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkImagePython.cpp.o CMakeFiles/ITKCommonPython.dir/itkVectorImagePython.cpp.o CMakeFiles/ITKCommonPython.dir/itkNeighborhoodPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkImageSourceCommonPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkImageSourcePython.cpp.o CMakeFiles/ITKCommonPython.dir/itkImageToImageFilterCommonPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkImageToImageFilterAPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkImageToImageFilterBPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkInPlaceImageFilterAPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkInPlaceImageFilterBPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkDefaultDynamicMeshTraitsPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkDefaultStaticMeshTraitsPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkFunctionBasePython.cpp.o CMakeFiles/ITKCommonPython.dir/itkArray2DPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkBSplineInterpolationWeightFunctionPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkDiffusionTensor3DPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkExtractImageFilterPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkImageBoundaryConditionPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkImageDuplicatorPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkImageTransformerPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkImportImageFilterPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkKernelFunctionBasePython.cpp.o CMakeFiles/ITKCommonPython.dir/itkMetaDataObjectPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkMinimumMaximumImageCalculatorPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkNumericTraitsPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkOptimizerParametersPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkPointSetPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkSimpleDataObjectDecoratorPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkSpatialFunctionPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkSpatialOrientationPython.cpp.o CMakeFiles/ITKCommonPython.dir/itkStreamingImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target ITKCommonPython make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/IOPlugin.dir/build.make Examples/IO/CMakeFiles/IOPlugin.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/IOPlugin.dir/DependInfo.cmake --color= Scanning dependencies of target IOPlugin make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/IOPlugin.dir/build.make Examples/IO/CMakeFiles/IOPlugin.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/IO/CMakeFiles/IOPlugin.dir/IOPlugin.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageReadRegionOfInterestWrite.dir/ImageReadRegionOfInterestWrite.cxx.o -c /<>/Examples/IO/ImageReadRegionOfInterestWrite.cxx In file included from /<>/Examples/IO/ImageReadRegionOfInterestWrite.cxx:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/ImageReadRegionOfInterestWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageReadRegionOfInterestWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageReadRegionOfInterestWrite.dir/ImageReadRegionOfInterestWrite.cxx.o -o ../../bin/ImageReadRegionOfInterestWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target ImageReadRegionOfInterestWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadImageSeriesWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadImageSeriesWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO /<>/BUILD /<>/BUILD/Examples/IO /<>/BUILD/Examples/IO/CMakeFiles/ImageReadImageSeriesWrite.dir/DependInfo.cmake --color= Scanning dependencies of target ImageReadImageSeriesWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/CMakeFiles/ImageReadImageSeriesWrite.dir/build.make Examples/IO/CMakeFiles/ImageReadImageSeriesWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/IO/CMakeFiles/ImageReadImageSeriesWrite.dir/ImageReadImageSeriesWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageReadExtractWrite.dir/ImageReadExtractWrite.cxx.o -c /<>/Examples/IO/ImageReadExtractWrite.cxx In file included from /<>/Examples/IO/ImageReadExtractWrite.cxx:35: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/ImageReadExtractWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/VisibleHumanStreamReadWrite.dir/VisibleHumanStreamReadWrite.cxx.o -c /<>/Examples/IO/VisibleHumanStreamReadWrite.cxx In file included from /<>/Examples/IO/VisibleHumanStreamReadWrite.cxx:19: In file included from /<>/Modules/IO/RAW/include/itkRawImageIO.h:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/VisibleHumanStreamReadWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageReadExtractWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageReadExtractWrite.dir/ImageReadExtractWrite.cxx.o -o ../../bin/ImageReadExtractWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target ImageReadExtractWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/XML/CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/build.make Examples/IO/XML/CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO/XML /<>/BUILD /<>/BUILD/Examples/IO/XML /<>/BUILD/Examples/IO/XML/CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/DependInfo.cmake --color= Scanning dependencies of target ParticleSwarmOptimizerReadWrite make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/XML/CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/build.make Examples/IO/XML/CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/IO/XML/CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/ParticleSwarmOptimizerReadWrite.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CovariantVectorImageWrite.dir/CovariantVectorImageWrite.cxx.o -c /<>/Examples/IO/CovariantVectorImageWrite.cxx In file included from /<>/Examples/IO/CovariantVectorImageWrite.cxx:42: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/VisibleHumanStreamReadWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/VisibleHumanStreamReadWrite.dir/VisibleHumanStreamReadWrite.cxx.o -o ../../bin/VisibleHumanStreamReadWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/CovariantVectorImageWrite make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target VisibleHumanStreamReadWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/IO/XML/CMakeFiles/DOMFindDemo.dir/build.make Examples/IO/XML/CMakeFiles/DOMFindDemo.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/IO/XML /<>/BUILD /<>/BUILD/Examples/IO/XML /<>/BUILD/Examples/IO/XML/CMakeFiles/DOMFindDemo.dir/DependInfo.cmake --color= Scanning dependencies of target DOMFindDemo make[3]: Leaving directory '/<>/BUILD' make -f Examples/IO/XML/CMakeFiles/DOMFindDemo.dir/build.make Examples/IO/XML/CMakeFiles/DOMFindDemo.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/IO/XML/CMakeFiles/DOMFindDemo.dir/DOMFindDemo.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CovariantVectorImageExtractComponent.dir/CovariantVectorImageExtractComponent.cxx.o -c /<>/Examples/IO/CovariantVectorImageExtractComponent.cxx In file included from /<>/Examples/IO/CovariantVectorImageExtractComponent.cxx:38: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/CovariantVectorImageExtractComponent make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/CovariantVectorImageWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CovariantVectorImageWrite.dir/CovariantVectorImageWrite.cxx.o -o ../../bin/CovariantVectorImageWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target CovariantVectorImageWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/Numerics/CMakeFiles/FourierDescriptors1.dir/build.make Examples/Numerics/CMakeFiles/FourierDescriptors1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Numerics /<>/BUILD /<>/BUILD/Examples/Numerics /<>/BUILD/Examples/Numerics/CMakeFiles/FourierDescriptors1.dir/DependInfo.cmake --color= Scanning dependencies of target FourierDescriptors1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Numerics/CMakeFiles/FourierDescriptors1.dir/build.make Examples/Numerics/CMakeFiles/FourierDescriptors1.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Numerics/CMakeFiles/FourierDescriptors1.dir/FourierDescriptors1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/CovariantVectorImageExtractComponent.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CovariantVectorImageExtractComponent.dir/CovariantVectorImageExtractComponent.cxx.o -o ../../bin/CovariantVectorImageExtractComponent -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target CovariantVectorImageExtractComponent make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/ThresholdSegmentationLevelSetImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/ThresholdSegmentationLevelSetImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/ThresholdSegmentationLevelSetImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target ThresholdSegmentationLevelSetImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/ThresholdSegmentationLevelSetImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/ThresholdSegmentationLevelSetImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/ThresholdSegmentationLevelSetImageFilter.dir/ThresholdSegmentationLevelSetImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DicomImageReadWrite.dir/DicomImageReadWrite.cxx.o -c /<>/Examples/IO/DicomImageReadWrite.cxx In file included from /<>/Examples/IO/DicomImageReadWrite.cxx:36: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO/XML && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DOMFindDemo.dir/DOMFindDemo.cxx.o -c /<>/Examples/IO/XML/DOMFindDemo.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/DicomImageReadWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../../bin/DOMFindDemo make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO/XML && /usr/bin/cmake -E cmake_link_script CMakeFiles/DOMFindDemo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DOMFindDemo.dir/DOMFindDemo.cxx.o -o ../../../bin/DOMFindDemo -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target DOMFindDemo make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/LaplacianSegmentationLevelSetImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/LaplacianSegmentationLevelSetImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Numerics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/FourierDescriptors1.dir/FourierDescriptors1.cxx.o -c /<>/Examples/Numerics/FourierDescriptors1.cxx In file included from /<>/Examples/Numerics/FourierDescriptors1.cxx:68: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/DicomImageReadWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DicomImageReadWrite.dir/DicomImageReadWrite.cxx.o -o ../../bin/DicomImageReadWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/LaplacianSegmentationLevelSetImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target LaplacianSegmentationLevelSetImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/LaplacianSegmentationLevelSetImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/LaplacianSegmentationLevelSetImageFilter.dir/build [ 80%] Linking CXX executable ../../bin/FourierDescriptors1 make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target DicomImageReadWrite make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/IO/XML/CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/itkParticleSwarmOptimizerDOMReader.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/LaplacianSegmentationLevelSetImageFilter.dir/LaplacianSegmentationLevelSetImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO/XML && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/ParticleSwarmOptimizerReadWrite.cxx.o -c /<>/Examples/IO/XML/ParticleSwarmOptimizerReadWrite.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/IO/XML/CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/itkParticleSwarmOptimizerDOMWriter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/FourierDescriptors1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/FourierDescriptors1.dir/FourierDescriptors1.cxx.o -o ../../bin/FourierDescriptors1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target FourierDescriptors1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/WatershedSegmentation1.dir/build.make Examples/Segmentation/CMakeFiles/WatershedSegmentation1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/WatershedSegmentation1.dir/DependInfo.cmake --color= Scanning dependencies of target WatershedSegmentation1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/WatershedSegmentation1.dir/build.make Examples/Segmentation/CMakeFiles/WatershedSegmentation1.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/WatershedSegmentation1.dir/WatershedSegmentation1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/IOPlugin.dir/IOPlugin.cxx.o -c /<>/Examples/IO/IOPlugin.cxx In file included from /<>/Examples/IO/IOPlugin.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/IOPlugin make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/IOPlugin.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/IOPlugin.dir/IOPlugin.cxx.o -o ../../bin/IOPlugin -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target IOPlugin make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/CellularSegmentation1.dir/build.make Examples/Segmentation/CMakeFiles/CellularSegmentation1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO/XML && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/itkParticleSwarmOptimizerDOMReader.cxx.o -c /<>/Examples/IO/XML/itkParticleSwarmOptimizerDOMReader.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/IO/XML/CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/itkParticleSwarmOptimizerSAXReader.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/CellularSegmentation1.dir/DependInfo.cmake --color= Scanning dependencies of target CellularSegmentation1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/CellularSegmentation1.dir/build.make Examples/Segmentation/CMakeFiles/CellularSegmentation1.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO/XML && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/itkParticleSwarmOptimizerDOMWriter.cxx.o -c /<>/Examples/IO/XML/itkParticleSwarmOptimizerDOMWriter.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/CellularSegmentation1.dir/CellularSegmentation1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/IO/XML/CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/itkParticleSwarmOptimizerSAXWriter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO/XML && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/itkParticleSwarmOptimizerSAXWriter.cxx.o -c /<>/Examples/IO/XML/itkParticleSwarmOptimizerSAXWriter.cxx make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/FastMarchingImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/FastMarchingImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageReadImageSeriesWrite.dir/ImageReadImageSeriesWrite.cxx.o -c /<>/Examples/IO/ImageReadImageSeriesWrite.cxx In file included from /<>/Examples/IO/ImageReadImageSeriesWrite.cxx:31: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/ImageReadImageSeriesWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/FastMarchingImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target FastMarchingImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/FastMarchingImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/FastMarchingImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/FastMarchingImageFilter.dir/FastMarchingImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageReadImageSeriesWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageReadImageSeriesWrite.dir/ImageReadImageSeriesWrite.cxx.o -o ../../bin/ImageReadImageSeriesWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target ImageReadImageSeriesWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/ConnectedThresholdImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/ConnectedThresholdImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO/XML && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/itkParticleSwarmOptimizerSAXReader.cxx.o -c /<>/Examples/IO/XML/itkParticleSwarmOptimizerSAXReader.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../../bin/ParticleSwarmOptimizerReadWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/ConnectedThresholdImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target ConnectedThresholdImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/ConnectedThresholdImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/ConnectedThresholdImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/ConnectedThresholdImageFilter.dir/ConnectedThresholdImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO/XML && /usr/bin/cmake -E cmake_link_script CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/ParticleSwarmOptimizerReadWrite.cxx.o CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/itkParticleSwarmOptimizerDOMReader.cxx.o CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/itkParticleSwarmOptimizerDOMWriter.cxx.o CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/itkParticleSwarmOptimizerSAXReader.cxx.o CMakeFiles/ParticleSwarmOptimizerReadWrite.dir/itkParticleSwarmOptimizerSAXWriter.cxx.o -o ../../../bin/ParticleSwarmOptimizerReadWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target ParticleSwarmOptimizerReadWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/ConfidenceConnected.dir/build.make Examples/Segmentation/CMakeFiles/ConfidenceConnected.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/ConfidenceConnected.dir/DependInfo.cmake --color= Scanning dependencies of target ConfidenceConnected make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/ConfidenceConnected.dir/build.make Examples/Segmentation/CMakeFiles/ConfidenceConnected.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/ConfidenceConnected.dir/ConfidenceConnected.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/VisibleHumanPasteWrite.dir/VisibleHumanPasteWrite.cxx.o -c /<>/Examples/IO/VisibleHumanPasteWrite.cxx In file included from /<>/Examples/IO/VisibleHumanPasteWrite.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/VisibleHumanPasteWrite make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/VisibleHumanPasteWrite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/VisibleHumanPasteWrite.dir/VisibleHumanPasteWrite.cxx.o -o ../../bin/VisibleHumanPasteWrite -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target VisibleHumanPasteWrite make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/RelabelComponentImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/RelabelComponentImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/RelabelComponentImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target RelabelComponentImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/RelabelComponentImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/RelabelComponentImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/RelabelComponentImageFilter.dir/RelabelComponentImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CellularSegmentation1.dir/CellularSegmentation1.cxx.o -c /<>/Examples/Segmentation/CellularSegmentation1.cxx In file included from /<>/Examples/Segmentation/CellularSegmentation1.cxx:34: In file included from /<>/Modules/Segmentation/BioCell/include/itkBioCellularAggregate.h:21: In file included from /<>/Modules/Core/Common/include/itkDefaultDynamicMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/CellularSegmentation1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/CellularSegmentation1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CellularSegmentation1.dir/CellularSegmentation1.cxx.o -o ../../bin/CellularSegmentation1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target CellularSegmentation1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/CannySegmentationLevelSetImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/CannySegmentationLevelSetImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/CannySegmentationLevelSetImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target CannySegmentationLevelSetImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/CannySegmentationLevelSetImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/CannySegmentationLevelSetImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/CannySegmentationLevelSetImageFilter.dir/CannySegmentationLevelSetImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/RelabelComponentImageFilter.dir/RelabelComponentImageFilter.cxx.o -c /<>/Examples/Segmentation/RelabelComponentImageFilter.cxx In file included from /<>/Examples/Segmentation/RelabelComponentImageFilter.cxx:31: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/RelabelComponentImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/RelabelComponentImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/RelabelComponentImageFilter.dir/RelabelComponentImageFilter.cxx.o -o ../../bin/RelabelComponentImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target RelabelComponentImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/IsolatedConnectedImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/IsolatedConnectedImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/IsolatedConnectedImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target IsolatedConnectedImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/IsolatedConnectedImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/IsolatedConnectedImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/IsolatedConnectedImageFilter.dir/IsolatedConnectedImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ConnectedThresholdImageFilter.dir/ConnectedThresholdImageFilter.cxx.o -c /<>/Examples/Segmentation/ConnectedThresholdImageFilter.cxx In file included from /<>/Examples/Segmentation/ConnectedThresholdImageFilter.cxx:67: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkConnectedThresholdImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/ConnectedThresholdImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConnectedThresholdImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ConnectedThresholdImageFilter.dir/ConnectedThresholdImageFilter.cxx.o -o ../../bin/ConnectedThresholdImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target ConnectedThresholdImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/CellularSegmentation2.dir/build.make Examples/Segmentation/CMakeFiles/CellularSegmentation2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ConfidenceConnected.dir/ConfidenceConnected.cxx.o -c /<>/Examples/Segmentation/ConfidenceConnected.cxx In file included from /<>/Examples/Segmentation/ConfidenceConnected.cxx:76: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkConfidenceConnectedImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/ConfidenceConnected make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/CellularSegmentation2.dir/DependInfo.cmake --color= Scanning dependencies of target CellularSegmentation2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/CellularSegmentation2.dir/build.make Examples/Segmentation/CMakeFiles/CellularSegmentation2.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/CellularSegmentation2.dir/CellularSegmentation2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConfidenceConnected.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ConfidenceConnected.dir/ConfidenceConnected.cxx.o -o ../../bin/ConfidenceConnected -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target ConfidenceConnected make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/NeighborhoodConnectedImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/NeighborhoodConnectedImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/NeighborhoodConnectedImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target NeighborhoodConnectedImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/NeighborhoodConnectedImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/NeighborhoodConnectedImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/NeighborhoodConnectedImageFilter.dir/NeighborhoodConnectedImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ThresholdSegmentationLevelSetImageFilter.dir/ThresholdSegmentationLevelSetImageFilter.cxx.o -c /<>/Examples/Segmentation/ThresholdSegmentationLevelSetImageFilter.cxx In file included from /<>/Examples/Segmentation/ThresholdSegmentationLevelSetImageFilter.cxx:95: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/ThresholdSegmentationLevelSetImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/LaplacianSegmentationLevelSetImageFilter.dir/LaplacianSegmentationLevelSetImageFilter.cxx.o -c /<>/Examples/Segmentation/LaplacianSegmentationLevelSetImageFilter.cxx In file included from /<>/Examples/Segmentation/LaplacianSegmentationLevelSetImageFilter.cxx:73: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/LaplacianSegmentationLevelSetImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/ThresholdSegmentationLevelSetImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ThresholdSegmentationLevelSetImageFilter.dir/ThresholdSegmentationLevelSetImageFilter.cxx.o -o ../../bin/ThresholdSegmentationLevelSetImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target ThresholdSegmentationLevelSetImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/GeodesicActiveContourImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/GeodesicActiveContourImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/LaplacianSegmentationLevelSetImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/LaplacianSegmentationLevelSetImageFilter.dir/LaplacianSegmentationLevelSetImageFilter.cxx.o -o ../../bin/LaplacianSegmentationLevelSetImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target LaplacianSegmentationLevelSetImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/ConfidenceConnected3D.dir/build.make Examples/Segmentation/CMakeFiles/ConfidenceConnected3D.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/GeodesicActiveContourImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target GeodesicActiveContourImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/GeodesicActiveContourImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/GeodesicActiveContourImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/FastMarchingImageFilter.dir/FastMarchingImageFilter.cxx.o -c /<>/Examples/Segmentation/FastMarchingImageFilter.cxx In file included from /<>/Examples/Segmentation/FastMarchingImageFilter.cxx:118: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkCurvatureAnisotropicDiffusionImageFilter.h:21: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkAnisotropicDiffusionImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/ConfidenceConnected3D.dir/DependInfo.cmake --color= Scanning dependencies of target ConfidenceConnected3D make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/ConfidenceConnected3D.dir/build.make Examples/Segmentation/CMakeFiles/ConfidenceConnected3D.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/FastMarchingImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/GeodesicActiveContourImageFilter.dir/GeodesicActiveContourImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/ConfidenceConnected3D.dir/ConfidenceConnected3D.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/FastMarchingImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/FastMarchingImageFilter.dir/FastMarchingImageFilter.cxx.o -o ../../bin/FastMarchingImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target FastMarchingImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/CurvesLevelSetImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/CurvesLevelSetImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/CurvesLevelSetImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target CurvesLevelSetImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/CurvesLevelSetImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/CurvesLevelSetImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/CurvesLevelSetImageFilter.dir/CurvesLevelSetImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/WatershedSegmentation1.dir/WatershedSegmentation1.cxx.o -c /<>/Examples/Segmentation/WatershedSegmentation1.cxx In file included from /<>/Examples/Segmentation/WatershedSegmentation1.cxx:56: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkVectorGradientAnisotropicDiffusionImageFilter.h:22: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkAnisotropicDiffusionImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/WatershedSegmentation1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/WatershedSegmentation1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/WatershedSegmentation1.dir/WatershedSegmentation1.cxx.o -o ../../bin/WatershedSegmentation1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target WatershedSegmentation1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/GeodesicActiveContourShapePriorLevelSetImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/GeodesicActiveContourShapePriorLevelSetImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/GeodesicActiveContourShapePriorLevelSetImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target GeodesicActiveContourShapePriorLevelSetImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/GeodesicActiveContourShapePriorLevelSetImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/GeodesicActiveContourShapePriorLevelSetImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/GeodesicActiveContourShapePriorLevelSetImageFilter.dir/GeodesicActiveContourShapePriorLevelSetImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/IsolatedConnectedImageFilter.dir/IsolatedConnectedImageFilter.cxx.o -c /<>/Examples/Segmentation/IsolatedConnectedImageFilter.cxx In file included from /<>/Examples/Segmentation/IsolatedConnectedImageFilter.cxx:50: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkIsolatedConnectedImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/IsolatedConnectedImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/IsolatedConnectedImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/IsolatedConnectedImageFilter.dir/IsolatedConnectedImageFilter.cxx.o -o ../../bin/IsolatedConnectedImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target IsolatedConnectedImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/WatershedSegmentation2.dir/build.make Examples/Segmentation/CMakeFiles/WatershedSegmentation2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/WatershedSegmentation2.dir/DependInfo.cmake --color= Scanning dependencies of target WatershedSegmentation2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/WatershedSegmentation2.dir/build.make Examples/Segmentation/CMakeFiles/WatershedSegmentation2.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/WatershedSegmentation2.dir/WatershedSegmentation2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CellularSegmentation2.dir/CellularSegmentation2.cxx.o -c /<>/Examples/Segmentation/CellularSegmentation2.cxx In file included from /<>/Examples/Segmentation/CellularSegmentation2.cxx:34: In file included from /<>/Modules/Segmentation/BioCell/include/itkBioCellularAggregate.h:21: In file included from /<>/Modules/Core/Common/include/itkDefaultDynamicMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/CellularSegmentation2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/CellularSegmentation2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CellularSegmentation2.dir/CellularSegmentation2.cxx.o -o ../../bin/CellularSegmentation2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target CellularSegmentation2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/HoughTransform2DCirclesImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/HoughTransform2DCirclesImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/HoughTransform2DCirclesImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target HoughTransform2DCirclesImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/HoughTransform2DCirclesImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/HoughTransform2DCirclesImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/HoughTransform2DCirclesImageFilter.dir/HoughTransform2DCirclesImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/NeighborhoodConnectedImageFilter.dir/NeighborhoodConnectedImageFilter.cxx.o -c /<>/Examples/Segmentation/NeighborhoodConnectedImageFilter.cxx In file included from /<>/Examples/Segmentation/NeighborhoodConnectedImageFilter.cxx:43: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkNeighborhoodConnectedImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/NeighborhoodConnectedImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/NeighborhoodConnectedImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/NeighborhoodConnectedImageFilter.dir/NeighborhoodConnectedImageFilter.cxx.o -o ../../bin/NeighborhoodConnectedImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target NeighborhoodConnectedImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/VectorConfidenceConnected.dir/build.make Examples/Segmentation/CMakeFiles/VectorConfidenceConnected.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/VectorConfidenceConnected.dir/DependInfo.cmake --color= Scanning dependencies of target VectorConfidenceConnected make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/VectorConfidenceConnected.dir/build.make Examples/Segmentation/CMakeFiles/VectorConfidenceConnected.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/VectorConfidenceConnected.dir/VectorConfidenceConnected.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ConfidenceConnected3D.dir/ConfidenceConnected3D.cxx.o -c /<>/Examples/Segmentation/ConfidenceConnected3D.cxx In file included from /<>/Examples/Segmentation/ConfidenceConnected3D.cxx:25: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkConfidenceConnectedImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/ConfidenceConnected3D make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConfidenceConnected3D.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ConfidenceConnected3D.dir/ConfidenceConnected3D.cxx.o -o ../../bin/ConfidenceConnected3D -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target ConfidenceConnected3D make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/GibbsPriorImageFilter1.dir/build.make Examples/Segmentation/CMakeFiles/GibbsPriorImageFilter1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/GibbsPriorImageFilter1.dir/DependInfo.cmake --color= Scanning dependencies of target GibbsPriorImageFilter1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/GibbsPriorImageFilter1.dir/build.make Examples/Segmentation/CMakeFiles/GibbsPriorImageFilter1.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/GibbsPriorImageFilter1.dir/GibbsPriorImageFilter1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CannySegmentationLevelSetImageFilter.dir/CannySegmentationLevelSetImageFilter.cxx.o -c /<>/Examples/Segmentation/CannySegmentationLevelSetImageFilter.cxx In file included from /<>/Examples/Segmentation/CannySegmentationLevelSetImageFilter.cxx:81: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/CannySegmentationLevelSetImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/CannySegmentationLevelSetImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CannySegmentationLevelSetImageFilter.dir/CannySegmentationLevelSetImageFilter.cxx.o -o ../../bin/CannySegmentationLevelSetImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target CannySegmentationLevelSetImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/HoughTransform2DLinesImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/HoughTransform2DLinesImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/HoughTransform2DLinesImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target HoughTransform2DLinesImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/HoughTransform2DLinesImageFilter.dir/build.make Examples/Segmentation/CMakeFiles/HoughTransform2DLinesImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/HoughTransform2DLinesImageFilter.dir/HoughTransform2DLinesImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/VectorConfidenceConnected.dir/VectorConfidenceConnected.cxx.o -c /<>/Examples/Segmentation/VectorConfidenceConnected.cxx In file included from /<>/Examples/Segmentation/VectorConfidenceConnected.cxx:51: In file included from /<>/Modules/Segmentation/RegionGrowing/include/itkVectorConfidenceConnectedImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 80%] Linking CXX executable ../../bin/VectorConfidenceConnected make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/VectorConfidenceConnected.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/VectorConfidenceConnected.dir/VectorConfidenceConnected.cxx.o -o ../../bin/VectorConfidenceConnected -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 80%] Built target VectorConfidenceConnected make[2]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/ShapeDetectionLevelSetFilter.dir/build.make Examples/Segmentation/CMakeFiles/ShapeDetectionLevelSetFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Segmentation /<>/BUILD /<>/BUILD/Examples/Segmentation /<>/BUILD/Examples/Segmentation/CMakeFiles/ShapeDetectionLevelSetFilter.dir/DependInfo.cmake --color= Scanning dependencies of target ShapeDetectionLevelSetFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Segmentation/CMakeFiles/ShapeDetectionLevelSetFilter.dir/build.make Examples/Segmentation/CMakeFiles/ShapeDetectionLevelSetFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 80%] Building CXX object Examples/Segmentation/CMakeFiles/ShapeDetectionLevelSetFilter.dir/ShapeDetectionLevelSetFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GeodesicActiveContourImageFilter.dir/GeodesicActiveContourImageFilter.cxx.o -c /<>/Examples/Segmentation/GeodesicActiveContourImageFilter.cxx In file included from /<>/Examples/Segmentation/GeodesicActiveContourImageFilter.cxx:106: In file included from /<>/Modules/Segmentation/LevelSets/include/itkGeodesicActiveContourLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/GeodesicActiveContourImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/GeodesicActiveContourImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GeodesicActiveContourImageFilter.dir/GeodesicActiveContourImageFilter.cxx.o -o ../../bin/GeodesicActiveContourImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target GeodesicActiveContourImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/BoundingBoxFromImageMaskSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/BoundingBoxFromImageMaskSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/BoundingBoxFromImageMaskSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target BoundingBoxFromImageMaskSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/BoundingBoxFromImageMaskSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/BoundingBoxFromImageMaskSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/BoundingBoxFromImageMaskSpatialObject.dir/BoundingBoxFromImageMaskSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CurvesLevelSetImageFilter.dir/CurvesLevelSetImageFilter.cxx.o -c /<>/Examples/Segmentation/CurvesLevelSetImageFilter.cxx In file included from /<>/Examples/Segmentation/CurvesLevelSetImageFilter.cxx:81: In file included from /<>/Modules/Segmentation/LevelSets/include/itkCurvesLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/CurvesLevelSetImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/CurvesLevelSetImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CurvesLevelSetImageFilter.dir/CurvesLevelSetImageFilter.cxx.o -o ../../bin/CurvesLevelSetImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target CurvesLevelSetImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/DTITubeSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/DTITubeSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/DTITubeSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target DTITubeSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/DTITubeSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/DTITubeSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/DTITubeSpatialObject.dir/DTITubeSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GibbsPriorImageFilter1.dir/GibbsPriorImageFilter1.cxx.o -c /<>/Examples/Segmentation/GibbsPriorImageFilter1.cxx In file included from /<>/Examples/Segmentation/GibbsPriorImageFilter1.cxx:34: In file included from /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include/itkRGBGibbsPriorFilter.h:24: In file included from /<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include/itkMRFImageFilter.h:24: In file included from /<>/Modules/Segmentation/Classifiers/include/itkImageClassifierBase.h:21: In file included from /<>/Modules/Segmentation/Classifiers/include/itkClassifierBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMembershipFunctionBase.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/HoughTransform2DCirclesImageFilter.dir/HoughTransform2DCirclesImageFilter.cxx.o -c /<>/Examples/Segmentation/HoughTransform2DCirclesImageFilter.cxx In file included from /<>/Examples/Segmentation/HoughTransform2DCirclesImageFilter.cxx:31: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHoughTransform2DCirclesImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/GibbsPriorImageFilter1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/HoughTransform2DCirclesImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/WatershedSegmentation2.dir/WatershedSegmentation2.cxx.o -c /<>/Examples/Segmentation/WatershedSegmentation2.cxx In file included from /<>/Examples/Segmentation/WatershedSegmentation2.cxx:27: In file included from /<>/Modules/Segmentation/Watersheds/include/itkWatershedImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/HoughTransform2DCirclesImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/HoughTransform2DCirclesImageFilter.dir/HoughTransform2DCirclesImageFilter.cxx.o -o ../../bin/HoughTransform2DCirclesImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/WatershedSegmentation2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/GibbsPriorImageFilter1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GibbsPriorImageFilter1.dir/GibbsPriorImageFilter1.cxx.o -o ../../bin/GibbsPriorImageFilter1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target HoughTransform2DCirclesImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/TubeSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/TubeSpatialObject.dir/depend make[2]: Entering directory '/<>/BUILD' [ 81%] Built target GibbsPriorImageFilter1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/SurfaceSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/SurfaceSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/TubeSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target TubeSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/TubeSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/TubeSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/SurfaceSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target SurfaceSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/SurfaceSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/SurfaceSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/TubeSpatialObject.dir/TubeSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/SurfaceSpatialObject.dir/SurfaceSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/WatershedSegmentation2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/WatershedSegmentation2.dir/WatershedSegmentation2.cxx.o -o ../../bin/WatershedSegmentation2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target WatershedSegmentation2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/EllipseSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/EllipseSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/EllipseSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target EllipseSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/EllipseSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/EllipseSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/EllipseSpatialObject.dir/EllipseSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DTITubeSpatialObject.dir/DTITubeSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/DTITubeSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/DTITubeSpatialObject.cxx:35: In file included from /<>/Modules/Core/SpatialObjects/include/itkDTITubeSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkTubeSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/DTITubeSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/DTITubeSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DTITubeSpatialObject.dir/DTITubeSpatialObject.cxx.o -o ../../bin/DTITubeSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target DTITubeSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/CylinderSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/CylinderSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GeodesicActiveContourShapePriorLevelSetImageFilter.dir/GeodesicActiveContourShapePriorLevelSetImageFilter.cxx.o -c /<>/Examples/Segmentation/GeodesicActiveContourShapePriorLevelSetImageFilter.cxx In file included from /<>/Examples/Segmentation/GeodesicActiveContourShapePriorLevelSetImageFilter.cxx:108: In file included from /<>/Modules/Segmentation/LevelSets/include/itkGeodesicActiveContourShapePriorLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkShapePriorSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSegmentationLevelSetImageFilter.h:21: In file included from /<>/Modules/Segmentation/LevelSets/include/itkSparseFieldLevelSetImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/GeodesicActiveContourShapePriorLevelSetImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/CylinderSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target CylinderSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/CylinderSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/CylinderSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/CylinderSpatialObject.dir/CylinderSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SurfaceSpatialObject.dir/SurfaceSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/SurfaceSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/SurfaceSpatialObject.cxx:31: In file included from /<>/Modules/Core/SpatialObjects/include/itkSurfaceSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/SurfaceSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/GeodesicActiveContourShapePriorLevelSetImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GeodesicActiveContourShapePriorLevelSetImageFilter.dir/GeodesicActiveContourShapePriorLevelSetImageFilter.cxx.o -o ../../bin/GeodesicActiveContourShapePriorLevelSetImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target GeodesicActiveContourShapePriorLevelSetImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/ArrowSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/ArrowSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/ArrowSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target ArrowSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/ArrowSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/ArrowSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/SurfaceSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SurfaceSpatialObject.dir/SurfaceSpatialObject.cxx.o -o ../../bin/SurfaceSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/ArrowSpatialObject.dir/ArrowSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target SurfaceSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/SpatialObjectTreeContainer.dir/build.make Examples/SpatialObjects/CMakeFiles/SpatialObjectTreeContainer.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/EllipseSpatialObject.dir/EllipseSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/EllipseSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/EllipseSpatialObject.cxx:31: In file included from /<>/Modules/Core/SpatialObjects/include/itkEllipseSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/EllipseSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/SpatialObjectTreeContainer.dir/DependInfo.cmake --color= Scanning dependencies of target SpatialObjectTreeContainer make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/SpatialObjectTreeContainer.dir/build.make Examples/SpatialObjects/CMakeFiles/SpatialObjectTreeContainer.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/SpatialObjectTreeContainer.dir/SpatialObjectTreeContainer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/BoundingBoxFromImageMaskSpatialObject.dir/BoundingBoxFromImageMaskSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/BoundingBoxFromImageMaskSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/BoundingBoxFromImageMaskSpatialObject.cxx:33: In file included from /<>/Modules/Core/SpatialObjects/include/itkImageMaskSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkImageSpatialObject.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/BoundingBoxFromImageMaskSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/EllipseSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/EllipseSpatialObject.dir/EllipseSpatialObject.cxx.o -o ../../bin/EllipseSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target EllipseSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/GaussianSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/GaussianSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/GaussianSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target GaussianSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/GaussianSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/GaussianSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/GaussianSpatialObject.dir/GaussianSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/CylinderSpatialObject.dir/CylinderSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/CylinderSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/CylinderSpatialObject.cxx:29: In file included from /<>/Modules/Core/SpatialObjects/include/itkCylinderSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/CylinderSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/BoundingBoxFromImageMaskSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/BoundingBoxFromImageMaskSpatialObject.dir/BoundingBoxFromImageMaskSpatialObject.cxx.o -o ../../bin/BoundingBoxFromImageMaskSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target BoundingBoxFromImageMaskSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/BlobSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/BlobSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/TubeSpatialObject.dir/TubeSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/TubeSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/TubeSpatialObject.cxx:31: In file included from /<>/Modules/Core/SpatialObjects/include/itkTubeSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/TubeSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/BlobSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target BlobSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/BlobSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/BlobSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/BlobSpatialObject.dir/BlobSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/CylinderSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/CylinderSpatialObject.dir/CylinderSpatialObject.cxx.o -o ../../bin/CylinderSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target CylinderSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/ImageMaskSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/ImageMaskSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/TubeSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/TubeSpatialObject.dir/TubeSpatialObject.cxx.o -o ../../bin/TubeSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target TubeSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/SpatialObjectToImageStatisticsCalculator.dir/build.make Examples/SpatialObjects/CMakeFiles/SpatialObjectToImageStatisticsCalculator.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/ImageMaskSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target ImageMaskSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/ImageMaskSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/ImageMaskSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/ImageMaskSpatialObject.dir/ImageMaskSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/SpatialObjectToImageStatisticsCalculator.dir/DependInfo.cmake --color= Scanning dependencies of target SpatialObjectToImageStatisticsCalculator make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/SpatialObjectToImageStatisticsCalculator.dir/build.make Examples/SpatialObjects/CMakeFiles/SpatialObjectToImageStatisticsCalculator.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/SpatialObjectToImageStatisticsCalculator.dir/SpatialObjectToImageStatisticsCalculator.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/HoughTransform2DLinesImageFilter.dir/HoughTransform2DLinesImageFilter.cxx.o -c /<>/Examples/Segmentation/HoughTransform2DLinesImageFilter.cxx In file included from /<>/Examples/Segmentation/HoughTransform2DLinesImageFilter.cxx:31: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHoughTransform2DLinesImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/HoughTransform2DLinesImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/HoughTransform2DLinesImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/HoughTransform2DLinesImageFilter.dir/HoughTransform2DLinesImageFilter.cxx.o -o ../../bin/HoughTransform2DLinesImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target HoughTransform2DLinesImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/ImageSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/ImageSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/ImageSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target ImageSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/ImageSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/ImageSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/ImageSpatialObject.dir/ImageSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ArrowSpatialObject.dir/ArrowSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/ArrowSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/ArrowSpatialObject.cxx:29: In file included from /<>/Modules/Core/SpatialObjects/include/itkArrowSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ArrowSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/ArrowSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ArrowSpatialObject.dir/ArrowSpatialObject.cxx.o -o ../../bin/ArrowSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ArrowSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/MeshSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/MeshSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/MeshSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target MeshSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/MeshSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/MeshSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/MeshSpatialObject.dir/MeshSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GaussianSpatialObject.dir/GaussianSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/GaussianSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/GaussianSpatialObject.cxx:31: In file included from /<>/Modules/Core/SpatialObjects/include/itkGaussianSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkEllipseSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/GaussianSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/GaussianSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GaussianSpatialObject.dir/GaussianSpatialObject.cxx.o -o ../../bin/GaussianSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target GaussianSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/VesselTubeSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/VesselTubeSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/VesselTubeSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target VesselTubeSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/VesselTubeSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/VesselTubeSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/VesselTubeSpatialObject.dir/VesselTubeSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ShapeDetectionLevelSetFilter.dir/ShapeDetectionLevelSetFilter.cxx.o -c /<>/Examples/Segmentation/ShapeDetectionLevelSetFilter.cxx In file included from /<>/Examples/Segmentation/ShapeDetectionLevelSetFilter.cxx:102: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkCurvatureAnisotropicDiffusionImageFilter.h:21: In file included from /<>/Modules/Filtering/AnisotropicSmoothing/include/itkAnisotropicDiffusionImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ShapeDetectionLevelSetFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/BlobSpatialObject.dir/BlobSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/BlobSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/BlobSpatialObject.cxx:32: In file included from /<>/Modules/Core/SpatialObjects/include/itkBlobSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/BlobSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShapeDetectionLevelSetFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ShapeDetectionLevelSetFilter.dir/ShapeDetectionLevelSetFilter.cxx.o -o ../../bin/ShapeDetectionLevelSetFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ShapeDetectionLevelSetFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/GroupSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/GroupSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SpatialObjectTreeContainer.dir/SpatialObjectTreeContainer.cxx.o -c /<>/Examples/SpatialObjects/SpatialObjectTreeContainer.cxx In file included from /<>/Examples/SpatialObjects/SpatialObjectTreeContainer.cxx:28: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectTreeContainer.h:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectTreeNode.h:22: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/SpatialObjectTreeContainer make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/GroupSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target GroupSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/GroupSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/GroupSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/GroupSpatialObject.dir/GroupSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/BlobSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/BlobSpatialObject.dir/BlobSpatialObject.cxx.o -o ../../bin/BlobSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target BlobSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/SpatialObjectHierarchy.dir/build.make Examples/SpatialObjects/CMakeFiles/SpatialObjectHierarchy.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/SpatialObjectHierarchy.dir/DependInfo.cmake --color= Scanning dependencies of target SpatialObjectHierarchy make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/SpatialObjectHierarchy.dir/build.make Examples/SpatialObjects/CMakeFiles/SpatialObjectHierarchy.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/SpatialObjectHierarchy.dir/SpatialObjectHierarchy.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpatialObjectTreeContainer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SpatialObjectTreeContainer.dir/SpatialObjectTreeContainer.cxx.o -o ../../bin/SpatialObjectTreeContainer -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target SpatialObjectTreeContainer make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/SpatialObjectTransforms.dir/build.make Examples/SpatialObjects/CMakeFiles/SpatialObjectTransforms.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/SpatialObjectTransforms.dir/DependInfo.cmake --color= Scanning dependencies of target SpatialObjectTransforms make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/SpatialObjectTransforms.dir/build.make Examples/SpatialObjects/CMakeFiles/SpatialObjectTransforms.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/SpatialObjectTransforms.dir/SpatialObjectTransforms.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageMaskSpatialObject.dir/ImageMaskSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/ImageMaskSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/ImageMaskSpatialObject.cxx:37: In file included from /<>/Modules/Core/SpatialObjects/include/itkImageMaskSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkImageSpatialObject.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageMaskSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageMaskSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageMaskSpatialObject.dir/ImageMaskSpatialObject.cxx.o -o ../../bin/ImageMaskSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageMaskSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/LandmarkSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/LandmarkSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/LandmarkSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target LandmarkSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/LandmarkSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/LandmarkSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/LandmarkSpatialObject.dir/LandmarkSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SpatialObjectToImageStatisticsCalculator.dir/SpatialObjectToImageStatisticsCalculator.cxx.o -c /<>/Examples/SpatialObjects/SpatialObjectToImageStatisticsCalculator.cxx In file included from /<>/Examples/SpatialObjects/SpatialObjectToImageStatisticsCalculator.cxx:29: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObjectToImageStatisticsCalculator.h:22: In file included from /<>/Modules/Core/Common/include/itkFloodFilledSpatialFunctionConditionalConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkFloodFilledFunctionConditionalConstIterator.h:26: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/SpatialObjectToImageStatisticsCalculator make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpatialObjectToImageStatisticsCalculator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SpatialObjectToImageStatisticsCalculator.dir/SpatialObjectToImageStatisticsCalculator.cxx.o -o ../../bin/SpatialObjectToImageStatisticsCalculator -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target SpatialObjectToImageStatisticsCalculator make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/LineSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/LineSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/LineSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target LineSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/LineSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/LineSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/LineSpatialObject.dir/LineSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageSpatialObject.dir/ImageSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/ImageSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/ImageSpatialObject.cxx:29: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageSpatialObject.dir/ImageSpatialObject.cxx.o -o ../../bin/ImageSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/SceneSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/SceneSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/SceneSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target SceneSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/SceneSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/SceneSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/SceneSpatialObject.dir/SceneSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SpatialObjectHierarchy.dir/SpatialObjectHierarchy.cxx.o -c /<>/Examples/SpatialObjects/SpatialObjectHierarchy.cxx In file included from /<>/Examples/SpatialObjects/SpatialObjectHierarchy.cxx:29: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/SpatialObjectHierarchy make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpatialObjectHierarchy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SpatialObjectHierarchy.dir/SpatialObjectHierarchy.cxx.o -o ../../bin/SpatialObjectHierarchy -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target SpatialObjectHierarchy make[2]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/ReadWriteSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/ReadWriteSpatialObject.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/SpatialObjects /<>/BUILD /<>/BUILD/Examples/SpatialObjects /<>/BUILD/Examples/SpatialObjects/CMakeFiles/ReadWriteSpatialObject.dir/DependInfo.cmake --color= Scanning dependencies of target ReadWriteSpatialObject make[3]: Leaving directory '/<>/BUILD' make -f Examples/SpatialObjects/CMakeFiles/ReadWriteSpatialObject.dir/build.make Examples/SpatialObjects/CMakeFiles/ReadWriteSpatialObject.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/SpatialObjects/CMakeFiles/ReadWriteSpatialObject.dir/ReadWriteSpatialObject.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GroupSpatialObject.dir/GroupSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/GroupSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/GroupSpatialObject.cxx:33: In file included from /<>/Modules/Core/SpatialObjects/include/itkGroupSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SpatialObjectTransforms.dir/SpatialObjectTransforms.cxx.o -c /<>/Examples/SpatialObjects/SpatialObjectTransforms.cxx In file included from /<>/Examples/SpatialObjects/SpatialObjectTransforms.cxx:36: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/GroupSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/SpatialObjectTransforms make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/VesselTubeSpatialObject.dir/VesselTubeSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/VesselTubeSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/VesselTubeSpatialObject.cxx:33: In file included from /<>/Modules/Core/SpatialObjects/include/itkVesselTubeSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkTubeSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/VesselTubeSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/GroupSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GroupSpatialObject.dir/GroupSpatialObject.cxx.o -o ../../bin/GroupSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpatialObjectTransforms.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SpatialObjectTransforms.dir/SpatialObjectTransforms.cxx.o -o ../../bin/SpatialObjectTransforms -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target GroupSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/MinimumDecisionRule.dir/build.make Examples/Statistics/CMakeFiles/MinimumDecisionRule.dir/depend make[2]: Entering directory '/<>/BUILD' [ 81%] Built target SpatialObjectTransforms make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/MembershipSample.dir/build.make Examples/Statistics/CMakeFiles/MembershipSample.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/MinimumDecisionRule.dir/DependInfo.cmake --color= Scanning dependencies of target MinimumDecisionRule make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/VesselTubeSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/VesselTubeSpatialObject.dir/VesselTubeSpatialObject.cxx.o -o ../../bin/VesselTubeSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/MinimumDecisionRule.dir/build.make Examples/Statistics/CMakeFiles/MinimumDecisionRule.dir/build make[2]: Entering directory '/<>/BUILD' [ 81%] Built target VesselTubeSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/BayesianClassifier.dir/build.make Examples/Statistics/CMakeFiles/BayesianClassifier.dir/depend make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/MinimumDecisionRule.dir/MinimumDecisionRule.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/MembershipSample.dir/DependInfo.cmake --color= Scanning dependencies of target MembershipSample make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/MembershipSample.dir/build.make Examples/Statistics/CMakeFiles/MembershipSample.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/MembershipSample.dir/MembershipSample.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/BayesianClassifier.dir/DependInfo.cmake --color= Scanning dependencies of target BayesianClassifier make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/BayesianClassifier.dir/build.make Examples/Statistics/CMakeFiles/BayesianClassifier.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/BayesianClassifier.dir/BayesianClassifier.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MinimumDecisionRule.dir/MinimumDecisionRule.cxx.o -c /<>/Examples/Statistics/MinimumDecisionRule.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/MinimumDecisionRule make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/LandmarkSpatialObject.dir/LandmarkSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/LandmarkSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/LandmarkSpatialObject.cxx:30: In file included from /<>/Modules/Core/SpatialObjects/include/itkLandmarkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/LandmarkSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/MinimumDecisionRule.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MinimumDecisionRule.dir/MinimumDecisionRule.cxx.o -o ../../bin/MinimumDecisionRule -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target MinimumDecisionRule make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/SampleToHistogramFilter.dir/build.make Examples/Statistics/CMakeFiles/SampleToHistogramFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/SampleToHistogramFilter.dir/DependInfo.cmake --color= Scanning dependencies of target SampleToHistogramFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/SampleToHistogramFilter.dir/build.make Examples/Statistics/CMakeFiles/SampleToHistogramFilter.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/LandmarkSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/LandmarkSpatialObject.dir/LandmarkSpatialObject.cxx.o -o ../../bin/LandmarkSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target LandmarkSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/BayesianClassifierInitializer.dir/build.make Examples/Statistics/CMakeFiles/BayesianClassifierInitializer.dir/depend make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/SampleToHistogramFilter.dir/SampleToHistogramFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/BayesianClassifierInitializer.dir/DependInfo.cmake --color= Scanning dependencies of target BayesianClassifierInitializer make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/BayesianClassifierInitializer.dir/build.make Examples/Statistics/CMakeFiles/BayesianClassifierInitializer.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/BayesianClassifierInitializer.dir/BayesianClassifierInitializer.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/LineSpatialObject.dir/LineSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/LineSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/LineSpatialObject.cxx:30: In file included from /<>/Modules/Core/SpatialObjects/include/itkLineSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkPointBasedSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/LineSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MembershipSample.dir/MembershipSample.cxx.o -c /<>/Examples/Statistics/MembershipSample.cxx In file included from /<>/Examples/Statistics/MembershipSample.cxx:43: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/MembershipSample make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/LineSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/LineSpatialObject.dir/LineSpatialObject.cxx.o -o ../../bin/LineSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target LineSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ListSample.dir/build.make Examples/Statistics/CMakeFiles/ListSample.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/MembershipSample.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MembershipSample.dir/MembershipSample.cxx.o -o ../../bin/MembershipSample -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target MembershipSample make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/KdTreeBasedKMeansClustering.dir/build.make Examples/Statistics/CMakeFiles/KdTreeBasedKMeansClustering.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/ListSample.dir/DependInfo.cmake --color= Scanning dependencies of target ListSample make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ListSample.dir/build.make Examples/Statistics/CMakeFiles/ListSample.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SceneSpatialObject.dir/SceneSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/SceneSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/SceneSpatialObject.cxx:29: In file included from /<>/Modules/Core/SpatialObjects/include/itkSceneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/ListSample.dir/ListSample.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/KdTreeBasedKMeansClustering.dir/DependInfo.cmake --color= Scanning dependencies of target KdTreeBasedKMeansClustering make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/KdTreeBasedKMeansClustering.dir/build.make Examples/Statistics/CMakeFiles/KdTreeBasedKMeansClustering.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/SceneSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/KdTreeBasedKMeansClustering.dir/KdTreeBasedKMeansClustering.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/SceneSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SceneSpatialObject.dir/SceneSpatialObject.cxx.o -o ../../bin/SceneSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target SceneSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ScalarImageKmeansModelEstimator.dir/build.make Examples/Statistics/CMakeFiles/ScalarImageKmeansModelEstimator.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/ScalarImageKmeansModelEstimator.dir/DependInfo.cmake --color= Scanning dependencies of target ScalarImageKmeansModelEstimator make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ScalarImageKmeansModelEstimator.dir/build.make Examples/Statistics/CMakeFiles/ScalarImageKmeansModelEstimator.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/ScalarImageKmeansModelEstimator.dir/ScalarImageKmeansModelEstimator.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ListSample.dir/ListSample.cxx.o -c /<>/Examples/Statistics/ListSample.cxx In file included from /<>/Examples/Statistics/ListSample.cxx:48: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ListSample make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ListSample.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ListSample.dir/ListSample.cxx.o -o ../../bin/ListSample -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ListSample make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageEntropy1.dir/build.make Examples/Statistics/CMakeFiles/ImageEntropy1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/ImageEntropy1.dir/DependInfo.cmake --color= Scanning dependencies of target ImageEntropy1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageEntropy1.dir/build.make Examples/Statistics/CMakeFiles/ImageEntropy1.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/ImageEntropy1.dir/ImageEntropy1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SampleToHistogramFilter.dir/SampleToHistogramFilter.cxx.o -c /<>/Examples/Statistics/SampleToHistogramFilter.cxx In file included from /<>/Examples/Statistics/SampleToHistogramFilter.cxx:39: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/SampleToHistogramFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/SampleToHistogramFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SampleToHistogramFilter.dir/SampleToHistogramFilter.cxx.o -o ../../bin/SampleToHistogramFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target SampleToHistogramFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/Histogram.dir/build.make Examples/Statistics/CMakeFiles/Histogram.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/Histogram.dir/DependInfo.cmake --color= Scanning dependencies of target Histogram make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/Histogram.dir/build.make Examples/Statistics/CMakeFiles/Histogram.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/Histogram.dir/Histogram.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/Histogram.dir/Histogram.cxx.o -c /<>/Examples/Statistics/Histogram.cxx In file included from /<>/Examples/Statistics/Histogram.cxx:48: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/Histogram make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/KdTreeBasedKMeansClustering.dir/KdTreeBasedKMeansClustering.cxx.o -c /<>/Examples/Statistics/KdTreeBasedKMeansClustering.cxx In file included from /<>/Examples/Statistics/KdTreeBasedKMeansClustering.cxx:71: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/KdTreeBasedKMeansClustering make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/Histogram.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/Histogram.dir/Histogram.cxx.o -o ../../bin/Histogram -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target Histogram make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/MaximumRatioDecisionRule.dir/build.make Examples/Statistics/CMakeFiles/MaximumRatioDecisionRule.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/MaximumRatioDecisionRule.dir/DependInfo.cmake --color= Scanning dependencies of target MaximumRatioDecisionRule make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/MaximumRatioDecisionRule.dir/build.make Examples/Statistics/CMakeFiles/MaximumRatioDecisionRule.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/KdTreeBasedKMeansClustering.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/KdTreeBasedKMeansClustering.dir/KdTreeBasedKMeansClustering.cxx.o -o ../../bin/KdTreeBasedKMeansClustering -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/MaximumRatioDecisionRule.dir/MaximumRatioDecisionRule.cxx.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target KdTreeBasedKMeansClustering make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/EuclideanDistanceMetric.dir/build.make Examples/Statistics/CMakeFiles/EuclideanDistanceMetric.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/EuclideanDistanceMetric.dir/DependInfo.cmake --color= Scanning dependencies of target EuclideanDistanceMetric make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/EuclideanDistanceMetric.dir/build.make Examples/Statistics/CMakeFiles/EuclideanDistanceMetric.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/EuclideanDistanceMetric.dir/EuclideanDistanceMetric.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MaximumRatioDecisionRule.dir/MaximumRatioDecisionRule.cxx.o -c /<>/Examples/Statistics/MaximumRatioDecisionRule.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/MaximumRatioDecisionRule make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/EuclideanDistanceMetric.dir/EuclideanDistanceMetric.cxx.o -c /<>/Examples/Statistics/EuclideanDistanceMetric.cxx In file included from /<>/Examples/Statistics/EuclideanDistanceMetric.cxx:46: In file included from /<>/Modules/Numerics/Statistics/include/itkEuclideanDistanceMetric.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkDistanceMetric.h:22: In file included from /<>/Modules/Numerics/Statistics/include/itkMeasurementVectorTraits.h:24: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/EuclideanDistanceMetric make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/MaximumRatioDecisionRule.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MaximumRatioDecisionRule.dir/MaximumRatioDecisionRule.cxx.o -o ../../bin/MaximumRatioDecisionRule -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target MaximumRatioDecisionRule make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ExpectationMaximizationMixtureModelEstimator.dir/build.make Examples/Statistics/CMakeFiles/ExpectationMaximizationMixtureModelEstimator.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/EuclideanDistanceMetric.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/EuclideanDistanceMetric.dir/EuclideanDistanceMetric.cxx.o -o ../../bin/EuclideanDistanceMetric -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target EuclideanDistanceMetric make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/BayesianPluginClassifier.dir/build.make Examples/Statistics/CMakeFiles/BayesianPluginClassifier.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/ExpectationMaximizationMixtureModelEstimator.dir/DependInfo.cmake --color= Scanning dependencies of target ExpectationMaximizationMixtureModelEstimator make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ExpectationMaximizationMixtureModelEstimator.dir/build.make Examples/Statistics/CMakeFiles/ExpectationMaximizationMixtureModelEstimator.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/ExpectationMaximizationMixtureModelEstimator.dir/ExpectationMaximizationMixtureModelEstimator.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/BayesianPluginClassifier.dir/DependInfo.cmake --color= Scanning dependencies of target BayesianPluginClassifier make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/BayesianPluginClassifier.dir/build.make Examples/Statistics/CMakeFiles/BayesianPluginClassifier.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/BayesianPluginClassifier.dir/BayesianPluginClassifier.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ScalarImageKmeansModelEstimator.dir/ScalarImageKmeansModelEstimator.cxx.o -c /<>/Examples/Statistics/ScalarImageKmeansModelEstimator.cxx In file included from /<>/Examples/Statistics/ScalarImageKmeansModelEstimator.cxx:40: In file included from /<>/Modules/Numerics/Statistics/include/itkKdTree.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ScalarImageKmeansModelEstimator make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/BayesianClassifier.dir/BayesianClassifier.cxx.o -c /<>/Examples/Statistics/BayesianClassifier.cxx In file included from /<>/Examples/Statistics/BayesianClassifier.cxx:49: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/BayesianClassifier make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScalarImageKmeansModelEstimator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ScalarImageKmeansModelEstimator.dir/ScalarImageKmeansModelEstimator.cxx.o -o ../../bin/ScalarImageKmeansModelEstimator -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ScalarImageKmeansModelEstimator make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/GaussianMembershipFunction.dir/build.make Examples/Statistics/CMakeFiles/GaussianMembershipFunction.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/GaussianMembershipFunction.dir/DependInfo.cmake --color= Scanning dependencies of target GaussianMembershipFunction make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/GaussianMembershipFunction.dir/build.make Examples/Statistics/CMakeFiles/GaussianMembershipFunction.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/GaussianMembershipFunction.dir/GaussianMembershipFunction.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/BayesianClassifier.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/BayesianClassifier.dir/BayesianClassifier.cxx.o -o ../../bin/BayesianClassifier -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target BayesianClassifier make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/SampleStatistics.dir/build.make Examples/Statistics/CMakeFiles/SampleStatistics.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/SampleStatistics.dir/DependInfo.cmake --color= Scanning dependencies of target SampleStatistics make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/SampleStatistics.dir/build.make Examples/Statistics/CMakeFiles/SampleStatistics.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/SampleStatistics.dir/SampleStatistics.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageEntropy1.dir/ImageEntropy1.cxx.o -c /<>/Examples/Statistics/ImageEntropy1.cxx In file included from /<>/Examples/Statistics/ImageEntropy1.cxx:55: In file included from /<>/Modules/Numerics/Statistics/include/itkScalarImageToHistogramGenerator.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageEntropy1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/GaussianMembershipFunction.dir/GaussianMembershipFunction.cxx.o -c /<>/Examples/Statistics/GaussianMembershipFunction.cxx In file included from /<>/Examples/Statistics/GaussianMembershipFunction.cxx:35: In file included from /<>/Modules/Numerics/Statistics/include/itkGaussianMembershipFunction.h:21: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/GaussianMembershipFunction make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageEntropy1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageEntropy1.dir/ImageEntropy1.cxx.o -o ../../bin/ImageEntropy1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageEntropy1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/SampleSorting.dir/build.make Examples/Statistics/CMakeFiles/SampleSorting.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/SampleSorting.dir/DependInfo.cmake --color= Scanning dependencies of target SampleSorting make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/SampleSorting.dir/build.make Examples/Statistics/CMakeFiles/SampleSorting.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/SampleSorting.dir/SampleSorting.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/GaussianMembershipFunction.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/GaussianMembershipFunction.dir/GaussianMembershipFunction.cxx.o -o ../../bin/GaussianMembershipFunction -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target GaussianMembershipFunction make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/WeightedSampleStatistics.dir/build.make Examples/Statistics/CMakeFiles/WeightedSampleStatistics.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/WeightedSampleStatistics.dir/DependInfo.cmake --color= Scanning dependencies of target WeightedSampleStatistics make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/WeightedSampleStatistics.dir/build.make Examples/Statistics/CMakeFiles/WeightedSampleStatistics.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/WeightedSampleStatistics.dir/WeightedSampleStatistics.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SampleStatistics.dir/SampleStatistics.cxx.o -c /<>/Examples/Statistics/SampleStatistics.cxx In file included from /<>/Examples/Statistics/SampleStatistics.cxx:43: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/SampleStatistics make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MeshSpatialObject.dir/MeshSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/MeshSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/MeshSpatialObject.cxx:19: In file included from /<>/Modules/Core/Common/include/itkDefaultDynamicMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/MeshSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/SampleStatistics.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SampleStatistics.dir/SampleStatistics.cxx.o -o ../../bin/SampleStatistics -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target SampleStatistics make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageHistogram3.dir/build.make Examples/Statistics/CMakeFiles/ImageHistogram3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/ImageHistogram3.dir/DependInfo.cmake --color= Scanning dependencies of target ImageHistogram3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageHistogram3.dir/build.make Examples/Statistics/CMakeFiles/ImageHistogram3.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/ImageHistogram3.dir/ImageHistogram3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeshSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MeshSpatialObject.dir/MeshSpatialObject.cxx.o -o ../../bin/MeshSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target MeshSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/KdTree.dir/build.make Examples/Statistics/CMakeFiles/KdTree.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/KdTree.dir/DependInfo.cmake --color= Scanning dependencies of target KdTree make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/KdTree.dir/build.make Examples/Statistics/CMakeFiles/KdTree.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/KdTree.dir/KdTree.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/SampleSorting.dir/SampleSorting.cxx.o -c /<>/Examples/Statistics/SampleSorting.cxx In file included from /<>/Examples/Statistics/SampleSorting.cxx:53: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/SampleSorting make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/BayesianPluginClassifier.dir/BayesianPluginClassifier.cxx.o -c /<>/Examples/Statistics/BayesianPluginClassifier.cxx In file included from /<>/Examples/Statistics/BayesianPluginClassifier.cxx:61: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/BayesianPluginClassifier make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ExpectationMaximizationMixtureModelEstimator.dir/ExpectationMaximizationMixtureModelEstimator.cxx.o -c /<>/Examples/Statistics/ExpectationMaximizationMixtureModelEstimator.cxx In file included from /<>/Examples/Statistics/ExpectationMaximizationMixtureModelEstimator.cxx:81: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ExpectationMaximizationMixtureModelEstimator make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/BayesianPluginClassifier.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/BayesianPluginClassifier.dir/BayesianPluginClassifier.cxx.o -o ../../bin/BayesianPluginClassifier -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target BayesianPluginClassifier make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ScalarImageKmeansClassifier.dir/build.make Examples/Statistics/CMakeFiles/ScalarImageKmeansClassifier.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/SampleSorting.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/SampleSorting.dir/SampleSorting.cxx.o -o ../../bin/SampleSorting -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target SampleSorting make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageHistogram1.dir/build.make Examples/Statistics/CMakeFiles/ImageHistogram1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/ImageHistogram1.dir/DependInfo.cmake --color= Scanning dependencies of target ImageHistogram1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageHistogram1.dir/build.make Examples/Statistics/CMakeFiles/ImageHistogram1.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/ScalarImageKmeansClassifier.dir/DependInfo.cmake --color= Scanning dependencies of target ScalarImageKmeansClassifier make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ScalarImageKmeansClassifier.dir/build.make Examples/Statistics/CMakeFiles/ScalarImageKmeansClassifier.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/ImageHistogram1.dir/ImageHistogram1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ExpectationMaximizationMixtureModelEstimator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ExpectationMaximizationMixtureModelEstimator.dir/ExpectationMaximizationMixtureModelEstimator.cxx.o -o ../../bin/ExpectationMaximizationMixtureModelEstimator -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/ScalarImageKmeansClassifier.dir/ScalarImageKmeansClassifier.cxx.o make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ExpectationMaximizationMixtureModelEstimator make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ScalarImageMarkovRandomField1.dir/build.make Examples/Statistics/CMakeFiles/ScalarImageMarkovRandomField1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/ScalarImageMarkovRandomField1.dir/DependInfo.cmake --color= Scanning dependencies of target ScalarImageMarkovRandomField1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ScalarImageMarkovRandomField1.dir/build.make Examples/Statistics/CMakeFiles/ScalarImageMarkovRandomField1.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/ScalarImageMarkovRandomField1.dir/ScalarImageMarkovRandomField1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/BayesianClassifierInitializer.dir/BayesianClassifierInitializer.cxx.o -c /<>/Examples/Statistics/BayesianClassifierInitializer.cxx In file included from /<>/Examples/Statistics/BayesianClassifierInitializer.cxx:52: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/BayesianClassifierInitializer make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/WeightedSampleStatistics.dir/WeightedSampleStatistics.cxx.o -c /<>/Examples/Statistics/WeightedSampleStatistics.cxx In file included from /<>/Examples/Statistics/WeightedSampleStatistics.cxx:43: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/WeightedSampleStatistics make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/WeightedSampleStatistics.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/WeightedSampleStatistics.dir/WeightedSampleStatistics.cxx.o -o ../../bin/WeightedSampleStatistics -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target WeightedSampleStatistics make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageHistogram2.dir/build.make Examples/Statistics/CMakeFiles/ImageHistogram2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/ImageHistogram2.dir/DependInfo.cmake --color= Scanning dependencies of target ImageHistogram2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageHistogram2.dir/build.make Examples/Statistics/CMakeFiles/ImageHistogram2.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/ImageHistogram2.dir/ImageHistogram2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/BayesianClassifierInitializer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/BayesianClassifierInitializer.dir/BayesianClassifierInitializer.cxx.o -o ../../bin/BayesianClassifierInitializer -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target BayesianClassifierInitializer make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/PointSetToListSampleAdaptor.dir/build.make Examples/Statistics/CMakeFiles/PointSetToListSampleAdaptor.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/PointSetToListSampleAdaptor.dir/DependInfo.cmake --color= Scanning dependencies of target PointSetToListSampleAdaptor make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/PointSetToListSampleAdaptor.dir/build.make Examples/Statistics/CMakeFiles/PointSetToListSampleAdaptor.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/PointSetToListSampleAdaptor.dir/PointSetToListSampleAdaptor.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/KdTree.dir/KdTree.cxx.o -c /<>/Examples/Statistics/KdTree.cxx In file included from /<>/Examples/Statistics/KdTree.cxx:34: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/KdTree make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/KdTree.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/KdTree.dir/KdTree.cxx.o -o ../../bin/KdTree -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target KdTree make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageHistogram4.dir/build.make Examples/Statistics/CMakeFiles/ImageHistogram4.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/ImageHistogram4.dir/DependInfo.cmake --color= Scanning dependencies of target ImageHistogram4 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageHistogram4.dir/build.make Examples/Statistics/CMakeFiles/ImageHistogram4.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/ImageHistogram4.dir/ImageHistogram4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ReadWriteSpatialObject.dir/ReadWriteSpatialObject.cxx.o -c /<>/Examples/SpatialObjects/ReadWriteSpatialObject.cxx In file included from /<>/Examples/SpatialObjects/ReadWriteSpatialObject.cxx:37: In file included from /<>/Modules/IO/SpatialObjects/include/itkSpatialObjectReader.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaSceneConverter.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSceneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ReadWriteSpatialObject make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/SpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReadWriteSpatialObject.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ReadWriteSpatialObject.dir/ReadWriteSpatialObject.cxx.o -o ../../bin/ReadWriteSpatialObject -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ReadWriteSpatialObject make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/NormalVariateGenerator.dir/build.make Examples/Statistics/CMakeFiles/NormalVariateGenerator.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/NormalVariateGenerator.dir/DependInfo.cmake --color= Scanning dependencies of target NormalVariateGenerator make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/NormalVariateGenerator.dir/build.make Examples/Statistics/CMakeFiles/NormalVariateGenerator.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/NormalVariateGenerator.dir/NormalVariateGenerator.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/PointSetToListSampleAdaptor.dir/PointSetToListSampleAdaptor.cxx.o -c /<>/Examples/Statistics/PointSetToListSampleAdaptor.cxx In file included from /<>/Examples/Statistics/PointSetToListSampleAdaptor.cxx:42: In file included from /<>/Modules/Numerics/Statistics/include/itkPointSetToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/PointSetToListSampleAdaptor make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/PointSetToListSampleAdaptor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/PointSetToListSampleAdaptor.dir/PointSetToListSampleAdaptor.cxx.o -o ../../bin/PointSetToListSampleAdaptor -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target PointSetToListSampleAdaptor make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageToListSampleAdaptor.dir/build.make Examples/Statistics/CMakeFiles/ImageToListSampleAdaptor.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/NormalVariateGenerator.dir/NormalVariateGenerator.cxx.o -c /<>/Examples/Statistics/NormalVariateGenerator.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/NormalVariateGenerator make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/ImageToListSampleAdaptor.dir/DependInfo.cmake --color= Scanning dependencies of target ImageToListSampleAdaptor make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageToListSampleAdaptor.dir/build.make Examples/Statistics/CMakeFiles/ImageToListSampleAdaptor.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/ImageToListSampleAdaptor.dir/ImageToListSampleAdaptor.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/NormalVariateGenerator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/NormalVariateGenerator.dir/NormalVariateGenerator.cxx.o -o ../../bin/NormalVariateGenerator -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target NormalVariateGenerator make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageMutualInformation1.dir/build.make Examples/Statistics/CMakeFiles/ImageMutualInformation1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/ImageMutualInformation1.dir/DependInfo.cmake --color= Scanning dependencies of target ImageMutualInformation1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/ImageMutualInformation1.dir/build.make Examples/Statistics/CMakeFiles/ImageMutualInformation1.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/ImageMutualInformation1.dir/ImageMutualInformation1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageHistogram3.dir/ImageHistogram3.cxx.o -c /<>/Examples/Statistics/ImageHistogram3.cxx In file included from /<>/Examples/Statistics/ImageHistogram3.cxx:42: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToHistogramFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageHistogram3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageHistogram3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageHistogram3.dir/ImageHistogram3.cxx.o -o ../../bin/ImageHistogram3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageHistogram3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/MaximumDecisionRule.dir/build.make Examples/Statistics/CMakeFiles/MaximumDecisionRule.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/Statistics /<>/BUILD /<>/BUILD/Examples/Statistics /<>/BUILD/Examples/Statistics/CMakeFiles/MaximumDecisionRule.dir/DependInfo.cmake --color= Scanning dependencies of target MaximumDecisionRule make[3]: Leaving directory '/<>/BUILD' make -f Examples/Statistics/CMakeFiles/MaximumDecisionRule.dir/build.make Examples/Statistics/CMakeFiles/MaximumDecisionRule.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/Statistics/CMakeFiles/MaximumDecisionRule.dir/MaximumDecisionRule.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageHistogram1.dir/ImageHistogram1.cxx.o -c /<>/Examples/Statistics/ImageHistogram1.cxx In file included from /<>/Examples/Statistics/ImageHistogram1.cxx:39: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageHistogram1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageHistogram1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageHistogram1.dir/ImageHistogram1.cxx.o -o ../../bin/ImageHistogram1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageHistogram1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint3.dir/build.make Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MaximumDecisionRule.dir/MaximumDecisionRule.cxx.o -c /<>/Examples/Statistics/MaximumDecisionRule.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/MaximumDecisionRule make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint3.dir/DependInfo.cmake --color= Scanning dependencies of target IterativeClosestPoint3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint3.dir/build.make Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint3.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint3.dir/IterativeClosestPoint3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/MaximumDecisionRule.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MaximumDecisionRule.dir/MaximumDecisionRule.cxx.o -o ../../bin/MaximumDecisionRule -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target MaximumDecisionRule make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint1.dir/DependInfo.cmake --color= Scanning dependencies of target IterativeClosestPoint1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint1.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint1.dir/IterativeClosestPoint1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageToListSampleAdaptor.dir/ImageToListSampleAdaptor.cxx.o -c /<>/Examples/Statistics/ImageToListSampleAdaptor.cxx In file included from /<>/Examples/Statistics/ImageToListSampleAdaptor.cxx:58: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageToListSampleAdaptor make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageHistogram2.dir/ImageHistogram2.cxx.o -c /<>/Examples/Statistics/ImageHistogram2.cxx In file included from /<>/Examples/Statistics/ImageHistogram2.cxx:43: In file included from /<>/Modules/Numerics/Statistics/include/itkScalarImageToHistogramGenerator.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToListSampleAdaptor.h:23: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageHistogram2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageToListSampleAdaptor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageToListSampleAdaptor.dir/ImageToListSampleAdaptor.cxx.o -o ../../bin/ImageToListSampleAdaptor -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageToListSampleAdaptor make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/MeanSquaresImageMetric1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/MeanSquaresImageMetric1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/MeanSquaresImageMetric1.dir/DependInfo.cmake --color= Scanning dependencies of target MeanSquaresImageMetric1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/MeanSquaresImageMetric1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/MeanSquaresImageMetric1.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/MeanSquaresImageMetric1.dir/MeanSquaresImageMetric1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageHistogram2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageHistogram2.dir/ImageHistogram2.cxx.o -o ../../bin/ImageHistogram2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageHistogram2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistrationHistogramPlotter.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistrationHistogramPlotter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistrationHistogramPlotter.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistrationHistogramPlotter make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistrationHistogramPlotter.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistrationHistogramPlotter.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistrationHistogramPlotter.dir/ImageRegistrationHistogramPlotter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageHistogram4.dir/ImageHistogram4.cxx.o -c /<>/Examples/Statistics/ImageHistogram4.cxx In file included from /<>/Examples/Statistics/ImageHistogram4.cxx:54: In file included from /<>/Modules/Numerics/Statistics/include/itkImageToHistogramFilter.h:21: In file included from /<>/Modules/Numerics/Statistics/include/itkHistogram.h:24: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageHistogram4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ScalarImageKmeansClassifier.dir/ScalarImageKmeansClassifier.cxx.o -c /<>/Examples/Statistics/ScalarImageKmeansClassifier.cxx In file included from /<>/Examples/Statistics/ScalarImageKmeansClassifier.cxx:40: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ScalarImageKmeansClassifier make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageHistogram4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageHistogram4.dir/ImageHistogram4.cxx.o -o ../../bin/ImageHistogram4 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageHistogram4 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration2.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration2.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScalarImageKmeansClassifier.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ScalarImageKmeansClassifier.dir/ScalarImageKmeansClassifier.cxx.o -o ../../bin/ScalarImageKmeansClassifier -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ScalarImageKmeansClassifier make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration2.dir/ImageRegistration2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration1.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration1.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration1.dir/ImageRegistration1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/IterativeClosestPoint1.dir/IterativeClosestPoint1.cxx.o -c /<>/Examples/RegistrationITKv4/IterativeClosestPoint1.cxx In file included from /<>/Examples/RegistrationITKv4/IterativeClosestPoint1.cxx:34: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/IterativeClosestPoint1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/IterativeClosestPoint1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/IterativeClosestPoint1.dir/IterativeClosestPoint1.cxx.o -o ../../bin/IterativeClosestPoint1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target IterativeClosestPoint1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ModelToImageRegistration2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ModelToImageRegistration2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageMutualInformation1.dir/ImageMutualInformation1.cxx.o -c /<>/Examples/Statistics/ImageMutualInformation1.cxx In file included from /<>/Examples/Statistics/ImageMutualInformation1.cxx:81: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ModelToImageRegistration2.dir/DependInfo.cmake --color= Scanning dependencies of target ModelToImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ModelToImageRegistration2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ModelToImageRegistration2.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageMutualInformation1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ModelToImageRegistration2.dir/ModelToImageRegistration2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageMutualInformation1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageMutualInformation1.dir/ImageMutualInformation1.cxx.o -o ../../bin/ImageMutualInformation1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageMutualInformation1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration17.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration17.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration17.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration17 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration17.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration17.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration17.dir/ImageRegistration17.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ScalarImageMarkovRandomField1.dir/ScalarImageMarkovRandomField1.cxx.o -c /<>/Examples/Statistics/ScalarImageMarkovRandomField1.cxx In file included from /<>/Examples/Statistics/ScalarImageMarkovRandomField1.cxx:49: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ScalarImageMarkovRandomField1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/Statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScalarImageMarkovRandomField1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ScalarImageMarkovRandomField1.dir/ScalarImageMarkovRandomField1.cxx.o -o ../../bin/ScalarImageMarkovRandomField1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ScalarImageMarkovRandomField1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ModelToImageRegistration1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ModelToImageRegistration1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ModelToImageRegistration1.dir/DependInfo.cmake --color= Scanning dependencies of target ModelToImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ModelToImageRegistration1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ModelToImageRegistration1.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ModelToImageRegistration1.dir/ModelToImageRegistration1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/IterativeClosestPoint3.dir/IterativeClosestPoint3.cxx.o -c /<>/Examples/RegistrationITKv4/IterativeClosestPoint3.cxx In file included from /<>/Examples/RegistrationITKv4/IterativeClosestPoint3.cxx:39: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/IterativeClosestPoint3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/IterativeClosestPoint3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/IterativeClosestPoint3.dir/IterativeClosestPoint3.cxx.o -o ../../bin/IterativeClosestPoint3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target IterativeClosestPoint3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ThinPlateSplineWarp.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ThinPlateSplineWarp.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ThinPlateSplineWarp.dir/DependInfo.cmake --color= Scanning dependencies of target ThinPlateSplineWarp make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ThinPlateSplineWarp.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ThinPlateSplineWarp.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ThinPlateSplineWarp.dir/ThinPlateSplineWarp.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MeanSquaresImageMetric1.dir/MeanSquaresImageMetric1.cxx.o -c /<>/Examples/RegistrationITKv4/MeanSquaresImageMetric1.cxx In file included from /<>/Examples/RegistrationITKv4/MeanSquaresImageMetric1.cxx:34: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/MeanSquaresImageMetric1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeanSquaresImageMetric1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MeanSquaresImageMetric1.dir/MeanSquaresImageMetric1.cxx.o -o ../../bin/MeanSquaresImageMetric1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target MeanSquaresImageMetric1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DisplacementFieldInitialization.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DisplacementFieldInitialization.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DisplacementFieldInitialization.dir/DependInfo.cmake --color= Scanning dependencies of target DisplacementFieldInitialization make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DisplacementFieldInitialization.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DisplacementFieldInitialization.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DisplacementFieldInitialization.dir/DisplacementFieldInitialization.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ThinPlateSplineWarp.dir/ThinPlateSplineWarp.cxx.o -c /<>/Examples/RegistrationITKv4/ThinPlateSplineWarp.cxx In file included from /<>/Examples/RegistrationITKv4/ThinPlateSplineWarp.cxx:30: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ThinPlateSplineWarp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ModelToImageRegistration1.dir/ModelToImageRegistration1.cxx.o -c /<>/Examples/RegistrationITKv4/ModelToImageRegistration1.cxx In file included from /<>/Examples/RegistrationITKv4/ModelToImageRegistration1.cxx:47: In file included from /<>/Modules/Core/SpatialObjects/include/itkEllipseSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ThinPlateSplineWarp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ThinPlateSplineWarp.dir/ThinPlateSplineWarp.cxx.o -o ../../bin/ThinPlateSplineWarp -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ModelToImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ThinPlateSplineWarp make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration17.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration17.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration17.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration17 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration17.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration17.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration17.dir/DeformableRegistration17.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ModelToImageRegistration1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ModelToImageRegistration1.dir/ModelToImageRegistration1.cxx.o -o ../../bin/ModelToImageRegistration1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ModelToImageRegistration1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration15.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration15.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration15.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration15 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration15.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration15.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration15.dir/DeformableRegistration15.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration17.dir/ImageRegistration17.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration17.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration17.cxx:28: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration17 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistrationHistogramPlotter.dir/ImageRegistrationHistogramPlotter.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistrationHistogramPlotter.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistrationHistogramPlotter.cxx:102: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistrationHistogramPlotter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration17.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration17.dir/ImageRegistration17.cxx.o -o ../../bin/ImageRegistration17 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration17 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/BSplineWarping1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/BSplineWarping1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/BSplineWarping1.dir/DependInfo.cmake --color= Scanning dependencies of target BSplineWarping1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/BSplineWarping1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/BSplineWarping1.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/BSplineWarping1.dir/BSplineWarping1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration2.dir/ImageRegistration2.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration2.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration2.cxx:44: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistrationHistogramPlotter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistrationHistogramPlotter.dir/ImageRegistrationHistogramPlotter.cxx.o -o ../../bin/ImageRegistrationHistogramPlotter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistrationHistogramPlotter make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ChangeInformationImageFilter.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ChangeInformationImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ChangeInformationImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target ChangeInformationImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ChangeInformationImageFilter.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ChangeInformationImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ChangeInformationImageFilter.dir/ChangeInformationImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DisplacementFieldInitialization.dir/DisplacementFieldInitialization.cxx.o -c /<>/Examples/RegistrationITKv4/DisplacementFieldInitialization.cxx In file included from /<>/Examples/RegistrationITKv4/DisplacementFieldInitialization.cxx:37: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/DisplacementFieldInitialization make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration2.dir/ImageRegistration2.cxx.o -o ../../bin/ImageRegistration2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration15.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration15.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration15.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration15 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration15.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration15.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration15.dir/ImageRegistration15.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DisplacementFieldInitialization.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DisplacementFieldInitialization.dir/DisplacementFieldInitialization.cxx.o -o ../../bin/DisplacementFieldInitialization -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target DisplacementFieldInitialization make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration14.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration14.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration14.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration14 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration14.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration14.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration14.dir/ImageRegistration14.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ModelToImageRegistration2.dir/ModelToImageRegistration2.cxx.o -c /<>/Examples/RegistrationITKv4/ModelToImageRegistration2.cxx In file included from /<>/Examples/RegistrationITKv4/ModelToImageRegistration2.cxx:41: In file included from /<>/Modules/Core/SpatialObjects/include/itkBoxSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ModelToImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ModelToImageRegistration2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ModelToImageRegistration2.dir/ModelToImageRegistration2.cxx.o -o ../../bin/ModelToImageRegistration2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ModelToImageRegistration2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration13.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration13.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration13.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration13 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration13.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration13.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration13.dir/ImageRegistration13.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ChangeInformationImageFilter.dir/ChangeInformationImageFilter.cxx.o -c /<>/Examples/RegistrationITKv4/ChangeInformationImageFilter.cxx In file included from /<>/Examples/RegistrationITKv4/ChangeInformationImageFilter.cxx:36: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ChangeInformationImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChangeInformationImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ChangeInformationImageFilter.dir/ChangeInformationImageFilter.cxx.o -o ../../bin/ChangeInformationImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ChangeInformationImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration19.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration19.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration19.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration19 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration19.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration19.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration19.dir/ImageRegistration19.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/BSplineWarping1.dir/BSplineWarping1.cxx.o -c /<>/Examples/RegistrationITKv4/BSplineWarping1.cxx In file included from /<>/Examples/RegistrationITKv4/BSplineWarping1.cxx:29: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/BSplineWarping1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/BSplineWarping1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/BSplineWarping1.dir/BSplineWarping1.cxx.o -o ../../bin/BSplineWarping1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target BSplineWarping1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration11.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration11.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration11.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration11 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration11.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration11.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration11.dir/ImageRegistration11.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration15.dir/ImageRegistration15.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration15.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration15.cxx:28: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration15 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration15.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration15.dir/ImageRegistration15.cxx.o -o ../../bin/ImageRegistration15 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration15 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration5.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration5.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration5.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration5 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration5.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration5.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration5.dir/DeformableRegistration5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration1.dir/ImageRegistration1.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration1.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration1.cxx:48: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration1.dir/ImageRegistration1.cxx.o -o ../../bin/ImageRegistration1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration12.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration12.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration12.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration12 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration12.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration12.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration12.dir/ImageRegistration12.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration14.dir/ImageRegistration14.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration14.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration14.cxx:28: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration14 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration14.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration14.dir/ImageRegistration14.cxx.o -o ../../bin/ImageRegistration14 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration14 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration7.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration7.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration17.dir/DeformableRegistration17.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration17.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration17.cxx:92: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/DeformableRegistration17 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration7.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration7 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration7.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration7.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration7.dir/ImageRegistration7.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration17.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration17.dir/DeformableRegistration17.cxx.o -o ../../bin/DeformableRegistration17 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target DeformableRegistration17 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration7.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration7.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration7.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration7 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration7.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration7.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration7.dir/DeformableRegistration7.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration15.dir/DeformableRegistration15.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration15.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration15.cxx:33: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration15.cxx:52: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/Common/include/itkCenteredTransformInitializer.h:80:20: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here typedef typename TransformType::Pointer TransformPointer; ^ /<>/Examples/RegistrationITKv4/DeformableRegistration15.cxx:255:3: note: in instantiation of template class 'itk::CenteredTransformInitializer, itk::Image, itk::Image >' requested here TransformInitializerType::Pointer initializer = TransformInitializerType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration15.cxx:52: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/Common/include/itkCenteredTransformInitializer.h:80:20: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here typedef typename TransformType::Pointer TransformPointer; ^ /<>/Examples/RegistrationITKv4/DeformableRegistration15.cxx:255:3: note: in instantiation of template class 'itk::CenteredTransformInitializer, itk::Image, itk::Image >' requested here TransformInitializerType::Pointer initializer = TransformInitializerType::New(); ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/DeformableRegistration15 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration15.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration15.dir/DeformableRegistration15.cxx.o -o ../../bin/DeformableRegistration15 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target DeformableRegistration15 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration2.dir/DependInfo.cmake --color= Scanning dependencies of target MultiResImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration2.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration2.dir/MultiResImageRegistration2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration19.dir/ImageRegistration19.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration19.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration19.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration19 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration19.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration19.dir/ImageRegistration19.cxx.o -o ../../bin/ImageRegistration19 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration19 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/LandmarkWarping2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/LandmarkWarping2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/LandmarkWarping2.dir/DependInfo.cmake --color= Scanning dependencies of target LandmarkWarping2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/LandmarkWarping2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/LandmarkWarping2.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/LandmarkWarping2.dir/LandmarkWarping2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/LandmarkWarping2.dir/LandmarkWarping2.cxx.o -c /<>/Examples/RegistrationITKv4/LandmarkWarping2.cxx In file included from /<>/Examples/RegistrationITKv4/LandmarkWarping2.cxx:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/LandmarkWarping2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/LandmarkWarping2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/LandmarkWarping2.dir/LandmarkWarping2.cxx.o -o ../../bin/LandmarkWarping2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target LandmarkWarping2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration4.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration4.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration4.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration4 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration4.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration4.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration4.dir/ImageRegistration4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration5.dir/DeformableRegistration5.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration5.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration5.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/DeformableRegistration5 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration5.dir/DeformableRegistration5.cxx.o -o ../../bin/DeformableRegistration5 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target DeformableRegistration5 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/BSplineWarping2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/BSplineWarping2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/BSplineWarping2.dir/DependInfo.cmake --color= Scanning dependencies of target BSplineWarping2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/BSplineWarping2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/BSplineWarping2.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/BSplineWarping2.dir/BSplineWarping2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration13.dir/ImageRegistration13.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration13.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration13.cxx:27: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration13 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration13.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration13.dir/ImageRegistration13.cxx.o -o ../../bin/ImageRegistration13 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration13 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration16.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration16.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration16.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration16 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration16.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration16.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration16.dir/ImageRegistration16.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MultiResImageRegistration2.dir/MultiResImageRegistration2.cxx.o -c /<>/Examples/RegistrationITKv4/MultiResImageRegistration2.cxx In file included from /<>/Examples/RegistrationITKv4/MultiResImageRegistration2.cxx:52: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/MultiResImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiResImageRegistration2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MultiResImageRegistration2.dir/MultiResImageRegistration2.cxx.o -o ../../bin/MultiResImageRegistration2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration11.dir/ImageRegistration11.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration11.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration11.cxx:38: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target MultiResImageRegistration2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration10.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration10.dir/depend make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration11 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration10.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration10 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration10.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration10.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration10.dir/ImageRegistration10.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration11.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration11.dir/ImageRegistration11.cxx.o -o ../../bin/ImageRegistration11 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration11 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/BSplineWarping2.dir/BSplineWarping2.cxx.o -c /<>/Examples/RegistrationITKv4/BSplineWarping2.cxx In file included from /<>/Examples/RegistrationITKv4/BSplineWarping2.cxx:28: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/BSplineWarping2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint2.dir/DependInfo.cmake --color= Scanning dependencies of target IterativeClosestPoint2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint2.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/IterativeClosestPoint2.dir/IterativeClosestPoint2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/BSplineWarping2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/BSplineWarping2.dir/BSplineWarping2.cxx.o -o ../../bin/BSplineWarping2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target BSplineWarping2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration16.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration16.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration16.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration16 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration16.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration16.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration16.dir/DeformableRegistration16.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/IterativeClosestPoint2.dir/IterativeClosestPoint2.cxx.o -c /<>/Examples/RegistrationITKv4/IterativeClosestPoint2.cxx In file included from /<>/Examples/RegistrationITKv4/IterativeClosestPoint2.cxx:33: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Examples/RegistrationITKv4/IterativeClosestPoint2.cxx:33: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Examples/RegistrationITKv4/IterativeClosestPoint2.cxx:190:3: note: in instantiation of template class 'itk::Euler3DTransform' requested here TransformType::Pointer transform = TransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/IterativeClosestPoint2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/IterativeClosestPoint2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/IterativeClosestPoint2.dir/IterativeClosestPoint2.cxx.o -o ../../bin/IterativeClosestPoint2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target IterativeClosestPoint2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration5.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration5.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration5.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration5 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration5.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration5.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration5.dir/ImageRegistration5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration16.dir/ImageRegistration16.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration16.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration16.cxx:28: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration16 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration16.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration16.dir/ImageRegistration16.cxx.o -o ../../bin/ImageRegistration16 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration16 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/MultiStageImageRegistration1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/MultiStageImageRegistration1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/MultiStageImageRegistration1.dir/DependInfo.cmake --color= Scanning dependencies of target MultiStageImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/MultiStageImageRegistration1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/MultiStageImageRegistration1.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/MultiStageImageRegistration1.dir/MultiStageImageRegistration1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration7.dir/ImageRegistration7.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration7.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration7.cxx:56: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration7 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration7.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration7.dir/ImageRegistration7.cxx.o -o ../../bin/ImageRegistration7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration7 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration6.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration6.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration6.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration6 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration6.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration6.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration6.dir/ImageRegistration6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration7.dir/DeformableRegistration7.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration7.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration7.cxx:39: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/DeformableRegistration7 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration12.dir/ImageRegistration12.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration12.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration12.cxx:29: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration12 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration7.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration7.dir/DeformableRegistration7.cxx.o -o ../../bin/DeformableRegistration7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target DeformableRegistration7 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration8.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration8.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration8.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration8 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration8.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration8.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration8.dir/ImageRegistration8.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration12.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration12.dir/ImageRegistration12.cxx.o -o ../../bin/ImageRegistration12 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration12 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration18.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration18.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration18.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration18 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration18.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration18.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration18.dir/ImageRegistration18.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration10.dir/ImageRegistration10.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration10.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration10.cxx:31: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration10 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration10.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration10.dir/ImageRegistration10.cxx.o -o ../../bin/ImageRegistration10 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration10 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration6.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration6.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration6.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration6 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration6.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration6.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration6.dir/DeformableRegistration6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration4.dir/ImageRegistration4.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration4.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration4.cxx:43: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration4.dir/ImageRegistration4.cxx.o -o ../../bin/ImageRegistration4 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration4 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/MultiStageImageRegistration2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/MultiStageImageRegistration2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration16.dir/DeformableRegistration16.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration16.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration16.cxx:92: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/DeformableRegistration16 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/MultiStageImageRegistration2.dir/DependInfo.cmake --color= Scanning dependencies of target MultiStageImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/MultiStageImageRegistration2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/MultiStageImageRegistration2.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/MultiStageImageRegistration2.dir/MultiStageImageRegistration2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration16.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration16.dir/DeformableRegistration16.cxx.o -o ../../bin/DeformableRegistration16 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target DeformableRegistration16 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration4.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration4.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration4.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration4 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration4.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration4.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration4.dir/DeformableRegistration4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration18.dir/ImageRegistration18.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration18.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration18.cxx:34: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration18 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration18.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration18.dir/ImageRegistration18.cxx.o -o ../../bin/ImageRegistration18 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration18 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration9.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration9.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration9.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration9 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration9.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration9.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration9.dir/ImageRegistration9.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration5.dir/ImageRegistration5.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration5.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration5.cxx:51: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration5 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration5.dir/ImageRegistration5.cxx.o -o ../../bin/ImageRegistration5 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration5 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration20.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration20.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration20.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration20 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration20.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration20.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration20.dir/ImageRegistration20.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MultiStageImageRegistration1.dir/MultiStageImageRegistration1.cxx.o -c /<>/Examples/RegistrationITKv4/MultiStageImageRegistration1.cxx In file included from /<>/Examples/RegistrationITKv4/MultiStageImageRegistration1.cxx:52: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/MultiStageImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiStageImageRegistration1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MultiStageImageRegistration1.dir/MultiStageImageRegistration1.cxx.o -o ../../bin/MultiStageImageRegistration1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target MultiStageImageRegistration1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration8.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration8.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration8.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration8 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration8.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration8.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration8.dir/DeformableRegistration8.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration6.dir/ImageRegistration6.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration6.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration6.cxx:70: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration6 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration6.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration6.dir/ImageRegistration6.cxx.o -o ../../bin/ImageRegistration6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration6 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration14.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration14.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration14.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration14 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration14.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration14.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration14.dir/DeformableRegistration14.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration8.dir/ImageRegistration8.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration8.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration8.cxx:44: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Examples/RegistrationITKv4/ImageRegistration8.cxx:57: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:127:20: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here typedef typename OutputTransformType::Pointer OutputTransformPointer; ^ /<>/Examples/RegistrationITKv4/ImageRegistration8.cxx:175:3: note: in instantiation of template class 'itk::ImageRegistrationMethodv4, itk::Image, itk::VersorRigid3DTransform, itk::Image, itk::PointSet > >' requested here RegistrationType::Pointer registration = RegistrationType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Examples/RegistrationITKv4/ImageRegistration8.cxx:57: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:127:20: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here typedef typename OutputTransformType::Pointer OutputTransformPointer; ^ /<>/Examples/RegistrationITKv4/ImageRegistration8.cxx:175:3: note: in instantiation of template class 'itk::ImageRegistrationMethodv4, itk::Image, itk::VersorRigid3DTransform, itk::Image, itk::PointSet > >' requested here RegistrationType::Pointer registration = RegistrationType::New(); ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration8 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration8.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration8.dir/ImageRegistration8.cxx.o -o ../../bin/ImageRegistration8 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration8 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration10.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration10.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration10.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration10 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration10.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration10.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration10.dir/DeformableRegistration10.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration6.dir/DeformableRegistration6.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration6.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration6.cxx:51: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/DeformableRegistration6 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration6.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration6.dir/DeformableRegistration6.cxx.o -o ../../bin/DeformableRegistration6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target DeformableRegistration6 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration1.dir/DependInfo.cmake --color= Scanning dependencies of target MultiResImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration1.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration1.dir/MultiResImageRegistration1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MultiStageImageRegistration2.dir/MultiStageImageRegistration2.cxx.o -c /<>/Examples/RegistrationITKv4/MultiStageImageRegistration2.cxx In file included from /<>/Examples/RegistrationITKv4/MultiStageImageRegistration2.cxx:44: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/MultiStageImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiStageImageRegistration2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MultiStageImageRegistration2.dir/MultiStageImageRegistration2.cxx.o -o ../../bin/MultiStageImageRegistration2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target MultiStageImageRegistration2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration20.dir/ImageRegistration20.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration20.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration20.cxx:34: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration1.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration1.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration1.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration20 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration1.dir/DeformableRegistration1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration20.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration20.dir/ImageRegistration20.cxx.o -o ../../bin/ImageRegistration20 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target ImageRegistration20 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration3.dir/build.make Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration3.dir/DependInfo.cmake --color= Scanning dependencies of target MultiResImageRegistration3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration3.dir/build.make Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration3.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/MultiResImageRegistration3.dir/MultiResImageRegistration3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration4.dir/DeformableRegistration4.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration4.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration4.cxx:36: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/DeformableRegistration4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration4.dir/DeformableRegistration4.cxx.o -o ../../bin/DeformableRegistration4 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 81%] Built target DeformableRegistration4 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration11.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration11.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration11.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration11 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration11.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration11.dir/build make[3]: Entering directory '/<>/BUILD' [ 81%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration11.dir/DeformableRegistration11.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration9.dir/ImageRegistration9.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration9.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration9.cxx:42: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 81%] Linking CXX executable ../../bin/ImageRegistration9 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration14.dir/DeformableRegistration14.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration14.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration14.cxx:32: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/DeformableRegistration14 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration9.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration9.dir/ImageRegistration9.cxx.o -o ../../bin/ImageRegistration9 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target ImageRegistration9 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration3.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/ImageRegistration3.dir/DependInfo.cmake --color= Scanning dependencies of target ImageRegistration3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/ImageRegistration3.dir/build.make Examples/RegistrationITKv4/CMakeFiles/ImageRegistration3.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/ImageRegistration3.dir/ImageRegistration3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration14.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration14.dir/DeformableRegistration14.cxx.o -o ../../bin/DeformableRegistration14 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target DeformableRegistration14 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration2.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration2.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration2.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration2.dir/DeformableRegistration2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration10.dir/DeformableRegistration10.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx:25: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx:63:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx:68:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx:28: /<>/Modules/Registration/PDEDeformable/include/itkCurvatureRegistrationFilter.h:180:16: warning: 'Initialize' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void Initialize(); ^ /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx:70:50: note: in instantiation of template class 'itk::CurvatureRegistrationFilter, itk::Image, itk::Image, 3>, itk::FastSymmetricForcesDemonsRegistrationFunction, itk::Image, itk::Image, 3> > >' requested here const RegistrationFilterType * filter = static_cast< const RegistrationFilterType * >( object ); ^ /<>/Modules/Registration/PDEDeformable/include/itkPDEDeformableRegistrationFilter.h:281:16: note: overridden virtual function is here virtual void Initialize() ITK_OVERRIDE; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx:28: /<>/Modules/Registration/PDEDeformable/include/itkCurvatureRegistrationFilter.h:183:16: warning: 'ApplyUpdate' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void ApplyUpdate(const TimeStepType& dt); ^ /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:131:16: note: overridden virtual function is here virtual void ApplyUpdate(const TimeStepType& dt) ITK_OVERRIDE; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx:29: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:131:24: warning: 'ComputeGlobalTimeStep' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual TimeStepType ComputeGlobalTimeStep( void *itkNotUsed(GlobalData) ) const ^ /<>/Modules/Registration/PDEDeformable/include/itkCurvatureRegistrationFilter.hxx:199:5: note: in instantiation of template class 'itk::FastSymmetricForcesDemonsRegistrationFunction, itk::Image, itk::Image, 3> >' requested here dynamic_cast< RegistrationFunctionType * > ^ /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx:75:30: note: in instantiation of member function 'itk::CurvatureRegistrationFilter, itk::Image, itk::Image, 3>, itk::FastSymmetricForcesDemonsRegistrationFunction, itk::Image, itk::Image, 3> > >::GetMetric' requested here std::cout << filter->GetMetric() << std::endl; ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:165:24: note: overridden virtual function is here virtual TimeStepType ComputeGlobalTimeStep(void *GlobalData) const = 0; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx:29: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:138:18: warning: 'GetGlobalDataPointer' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void * GetGlobalDataPointer() const ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:174:18: note: overridden virtual function is here virtual void * GetGlobalDataPointer() const = 0; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx:29: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:149:16: warning: 'ReleaseGlobalDataPointer' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void ReleaseGlobalDataPointer(void *GlobalData) const; ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:181:16: note: overridden virtual function is here virtual void ReleaseGlobalDataPointer(void *GlobalData) const = 0; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx:29: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:152:16: warning: 'InitializeIteration' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void InitializeIteration(); ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:118:16: note: overridden virtual function is here virtual void InitializeIteration() {} ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration10.cxx:29: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:156:22: warning: 'ComputeUpdate' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual PixelType ComputeUpdate( const NeighborhoodType & neighborhood, ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:133:22: note: overridden virtual function is here virtual PixelType ComputeUpdate( const NeighborhoodType & neighborhood, ^ 10 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/DeformableRegistration10 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration10.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration10.dir/DeformableRegistration10.cxx.o -o ../../bin/DeformableRegistration10 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target DeformableRegistration10 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration9.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration9.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration9.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration9 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration9.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration9.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration9.dir/DeformableRegistration9.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration1.dir/DeformableRegistration1.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration1.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration1.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/DeformableRegistration1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration1.dir/DeformableRegistration1.cxx.o -o ../../bin/DeformableRegistration1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target DeformableRegistration1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration3.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration3.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration3.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration3.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration3.dir/DeformableRegistration3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MultiResImageRegistration3.dir/MultiResImageRegistration3.cxx.o -c /<>/Examples/RegistrationITKv4/MultiResImageRegistration3.cxx In file included from /<>/Examples/RegistrationITKv4/MultiResImageRegistration3.cxx:23: In file included from /<>/Modules/Registration/Common/include/itkMultiResolutionImageRegistrationMethod.h:22: In file included from /<>/Modules/Registration/Common/include/itkImageToImageMetric.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/MultiResImageRegistration3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiResImageRegistration3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MultiResImageRegistration3.dir/MultiResImageRegistration3.cxx.o -o ../../bin/MultiResImageRegistration3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target MultiResImageRegistration3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration12.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration12.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration12.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration12 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration12.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration12.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration12.dir/DeformableRegistration12.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration8.dir/DeformableRegistration8.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration8.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration8.cxx:32: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/DeformableRegistration8 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration8.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration8.dir/DeformableRegistration8.cxx.o -o ../../bin/DeformableRegistration8 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target DeformableRegistration8 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration13.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration13.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv4 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv4 /<>/BUILD/Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration13.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableRegistration13 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration13.dir/build.make Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration13.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration13.dir/DeformableRegistration13.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration11.dir/DeformableRegistration11.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration11.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration11.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/DeformableRegistration11 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration2.dir/DeformableRegistration2.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration2.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration2.cxx:27: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/DeformableRegistration2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration11.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration11.dir/DeformableRegistration11.cxx.o -o ../../bin/DeformableRegistration11 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target DeformableRegistration11 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3IterativeClosestPoint2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint2.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint2.dir/IterativeClosestPoint2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration2.dir/DeformableRegistration2.cxx.o -o ../../bin/DeformableRegistration2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target DeformableRegistration2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3IterativeClosestPoint1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint1.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint1.dir/IterativeClosestPoint1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/MultiResImageRegistration1.dir/MultiResImageRegistration1.cxx.o -c /<>/Examples/RegistrationITKv4/MultiResImageRegistration1.cxx In file included from /<>/Examples/RegistrationITKv4/MultiResImageRegistration1.cxx:54: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/MultiResImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration9.dir/DeformableRegistration9.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx:27: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx:64:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx:69:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx:30: /<>/Modules/Registration/PDEDeformable/include/itkCurvatureRegistrationFilter.h:180:16: warning: 'Initialize' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void Initialize(); ^ /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx:72:12: note: in instantiation of template class 'itk::CurvatureRegistrationFilter, itk::Image, itk::Image, 2>, itk::FastSymmetricForcesDemonsRegistrationFunction, itk::Image, itk::Image, 2> > >' requested here static_cast< const RegistrationFilterType * >( object ); ^ /<>/Modules/Registration/PDEDeformable/include/itkPDEDeformableRegistrationFilter.h:281:16: note: overridden virtual function is here virtual void Initialize() ITK_OVERRIDE; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx:30: /<>/Modules/Registration/PDEDeformable/include/itkCurvatureRegistrationFilter.h:183:16: warning: 'ApplyUpdate' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void ApplyUpdate(const TimeStepType& dt); ^ /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:131:16: note: overridden virtual function is here virtual void ApplyUpdate(const TimeStepType& dt) ITK_OVERRIDE; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx:31: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:131:24: warning: 'ComputeGlobalTimeStep' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual TimeStepType ComputeGlobalTimeStep( void *itkNotUsed(GlobalData) ) const ^ /<>/Modules/Registration/PDEDeformable/include/itkCurvatureRegistrationFilter.hxx:199:5: note: in instantiation of template class 'itk::FastSymmetricForcesDemonsRegistrationFunction, itk::Image, itk::Image, 2> >' requested here dynamic_cast< RegistrationFunctionType * > ^ /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx:77:30: note: in instantiation of member function 'itk::CurvatureRegistrationFilter, itk::Image, itk::Image, 2>, itk::FastSymmetricForcesDemonsRegistrationFunction, itk::Image, itk::Image, 2> > >::GetMetric' requested here std::cout << filter->GetMetric() << std::endl; ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:165:24: note: overridden virtual function is here virtual TimeStepType ComputeGlobalTimeStep(void *GlobalData) const = 0; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx:31: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:138:18: warning: 'GetGlobalDataPointer' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void * GetGlobalDataPointer() const ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:174:18: note: overridden virtual function is here virtual void * GetGlobalDataPointer() const = 0; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx:31: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:149:16: warning: 'ReleaseGlobalDataPointer' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void ReleaseGlobalDataPointer(void *GlobalData) const; ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:181:16: note: overridden virtual function is here virtual void ReleaseGlobalDataPointer(void *GlobalData) const = 0; ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx:31: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:152:16: warning: 'InitializeIteration' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void InitializeIteration(); ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:118:16: note: overridden virtual function is here virtual void InitializeIteration() {} ^ In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration9.cxx:31: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:156:22: warning: 'ComputeUpdate' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual PixelType ComputeUpdate( const NeighborhoodType & neighborhood, ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:133:22: note: overridden virtual function is here virtual PixelType ComputeUpdate( const NeighborhoodType & neighborhood, ^ 10 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/DeformableRegistration9 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/MultiResImageRegistration1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/MultiResImageRegistration1.dir/MultiResImageRegistration1.cxx.o -o ../../bin/MultiResImageRegistration1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration9.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration9.dir/DeformableRegistration9.cxx.o -o ../../bin/DeformableRegistration9 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target MultiResImageRegistration1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3MeanSquaresImageMetric1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3MeanSquaresImageMetric1.dir/depend make[2]: Entering directory '/<>/BUILD' [ 82%] Built target DeformableRegistration9 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3MeanSquaresImageMetric1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3MeanSquaresImageMetric1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3MeanSquaresImageMetric1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3MeanSquaresImageMetric1.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration1.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3MeanSquaresImageMetric1.dir/MeanSquaresImageMetric1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration1.dir/ImageRegistration1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3IterativeClosestPoint1.dir/IterativeClosestPoint1.cxx.o -c /<>/Examples/RegistrationITKv3/IterativeClosestPoint1.cxx In file included from /<>/Examples/RegistrationITKv3/IterativeClosestPoint1.cxx:28: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/IterativeClosestPoint1.cxx:52:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/IterativeClosestPoint1.cxx:57:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/ITKv3IterativeClosestPoint1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3IterativeClosestPoint2.dir/IterativeClosestPoint2.cxx.o -c /<>/Examples/RegistrationITKv3/IterativeClosestPoint2.cxx In file included from /<>/Examples/RegistrationITKv3/IterativeClosestPoint2.cxx:27: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/ITKv3IterativeClosestPoint2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3IterativeClosestPoint1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3IterativeClosestPoint1.dir/IterativeClosestPoint1.cxx.o -o ../../bin/ITKv3IterativeClosestPoint1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target ITKv3IterativeClosestPoint1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ModelToImageRegistration2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ModelToImageRegistration2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3IterativeClosestPoint2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3IterativeClosestPoint2.dir/IterativeClosestPoint2.cxx.o -o ../../bin/ITKv3IterativeClosestPoint2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target ITKv3IterativeClosestPoint2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration17.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration17.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ModelToImageRegistration2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ModelToImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ModelToImageRegistration2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ModelToImageRegistration2.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ModelToImageRegistration2.dir/ModelToImageRegistration2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration17.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration17 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration17.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration17.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration17.dir/ImageRegistration17.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration3.dir/DeformableRegistration3.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration3.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration3.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/DeformableRegistration3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration3.dir/DeformableRegistration3.cxx.o -o ../../bin/DeformableRegistration3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target DeformableRegistration3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ModelToImageRegistration1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ModelToImageRegistration1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ModelToImageRegistration1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ModelToImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ModelToImageRegistration1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ModelToImageRegistration1.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ModelToImageRegistration1.dir/ModelToImageRegistration1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3MeanSquaresImageMetric1.dir/MeanSquaresImageMetric1.cxx.o -c /<>/Examples/RegistrationITKv3/MeanSquaresImageMetric1.cxx In file included from /<>/Examples/RegistrationITKv3/MeanSquaresImageMetric1.cxx:34: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/ITKv3MeanSquaresImageMetric1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3MeanSquaresImageMetric1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3MeanSquaresImageMetric1.dir/MeanSquaresImageMetric1.cxx.o -o ../../bin/ITKv3MeanSquaresImageMetric1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target ITKv3MeanSquaresImageMetric1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ThinPlateSplineWarp.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ThinPlateSplineWarp.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ThinPlateSplineWarp.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ThinPlateSplineWarp make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ThinPlateSplineWarp.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ThinPlateSplineWarp.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ThinPlateSplineWarp.dir/ThinPlateSplineWarp.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ImageRegistration3.dir/ImageRegistration3.cxx.o -c /<>/Examples/RegistrationITKv4/ImageRegistration3.cxx In file included from /<>/Examples/RegistrationITKv4/ImageRegistration3.cxx:60: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/ImageRegistration3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImageRegistration3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ImageRegistration3.dir/ImageRegistration3.cxx.o -o ../../bin/ImageRegistration3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target ImageRegistration3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformationFieldJacobian.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformationFieldJacobian.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformationFieldJacobian.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformationFieldJacobian make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformationFieldJacobian.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformationFieldJacobian.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformationFieldJacobian.dir/DeformationFieldJacobian.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration1.dir/ImageRegistration1.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration1.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration1.cxx:48: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration1.cxx:80:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration1.cxx:85:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/ITKv3ImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration1.dir/ImageRegistration1.cxx.o -o ../../bin/ITKv3ImageRegistration1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target ITKv3ImageRegistration1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration17.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration17.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration17.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration17 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration17.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration17.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration17.dir/DeformableRegistration17.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration13.dir/DeformableRegistration13.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration13.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration13.cxx:33: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/DeformableRegistration13 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration13.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration13.dir/DeformableRegistration13.cxx.o -o ../../bin/DeformableRegistration13 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target DeformableRegistration13 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration16.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration16.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration16.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration16 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration16.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration16.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration16.dir/DeformableRegistration16.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration17.dir/ImageRegistration17.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration17.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration17.cxx:28: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration17.cxx:63:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration17.cxx:68:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/ITKv3ImageRegistration17 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ModelToImageRegistration1.dir/ModelToImageRegistration1.cxx.o -c /<>/Examples/RegistrationITKv3/ModelToImageRegistration1.cxx In file included from /<>/Examples/RegistrationITKv3/ModelToImageRegistration1.cxx:47: In file included from /<>/Modules/Core/SpatialObjects/include/itkEllipseSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ModelToImageRegistration1.cxx:268:8: warning: 'SetMovingSpatialObject' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void SetMovingSpatialObject( const MovingSpatialObjectType * object) ^ /<>/Examples/RegistrationITKv3/ModelToImageRegistration1.cxx:663:3: note: in instantiation of template class 'SimpleImageToSpatialObjectMetric, itk::GroupSpatialObject<2> >' requested here MetricType::Pointer metric = MetricType::New(); ^ /<>/Modules/Registration/Common/include/itkImageToSpatialObjectMetric.h:140:3: note: overridden virtual function is here itkSetConstObjectMacro(MovingSpatialObject, MovingSpatialObjectType); ^ /<>/Modules/Core/Common/include/itkMacro.h:1190:16: note: expanded from macro 'itkSetConstObjectMacro' virtual void Set##name (const type * _arg) \ ^ :127:1: note: expanded from here SetMovingSpatialObject ^ /<>/Examples/RegistrationITKv3/ModelToImageRegistration1.cxx:298:8: warning: 'GetDerivative' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void GetDerivative( const ParametersType &, DerivativeType & ) const ^ /<>/Modules/Numerics/Optimizers/include/itkSingleValuedCostFunction.h:66:16: note: overridden virtual function is here virtual void GetDerivative(const ParametersType & parameters, ^ /<>/Examples/RegistrationITKv3/ModelToImageRegistration1.cxx:322:18: warning: 'GetValue' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] MeasureType GetValue( const ParametersType & parameters ) const ^ /<>/Modules/Numerics/Optimizers/include/itkSingleValuedCostFunction.h:62:23: note: overridden virtual function is here virtual MeasureType GetValue(const ParametersType & parameters) const = 0; ^ /<>/Examples/RegistrationITKv3/ModelToImageRegistration1.cxx:342:8: warning: 'GetValueAndDerivative' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void GetValueAndDerivative( const ParametersType & parameters, ^ /<>/Modules/Registration/Common/include/itkImageToSpatialObjectMetric.h:150:16: note: overridden virtual function is here virtual void GetValueAndDerivative(const ParametersType & parameters, ^ /<>/Examples/RegistrationITKv3/ModelToImageRegistration1.cxx:176:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Examples/RegistrationITKv3/ModelToImageRegistration1.cxx:791:3: note: in instantiation of template class 'IterationCallback' requested here IterationCallbackType::Pointer callback = IterationCallbackType::New(); ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ModelToImageRegistration1.cxx:181:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object *, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 7 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/ITKv3ModelToImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration17.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration17.dir/ImageRegistration17.cxx.o -o ../../bin/ITKv3ImageRegistration17 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target ITKv3ImageRegistration17 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint3.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ModelToImageRegistration1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ModelToImageRegistration1.dir/ModelToImageRegistration1.cxx.o -o ../../bin/ITKv3ModelToImageRegistration1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target ITKv3ModelToImageRegistration1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration16.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration16.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint3.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3IterativeClosestPoint3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint3.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint3.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3IterativeClosestPoint3.dir/IterativeClosestPoint3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration16.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration16 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration16.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration16.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration16.dir/ImageRegistration16.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ModelToImageRegistration2.dir/ModelToImageRegistration2.cxx.o -c /<>/Examples/RegistrationITKv3/ModelToImageRegistration2.cxx In file included from /<>/Examples/RegistrationITKv3/ModelToImageRegistration2.cxx:41: In file included from /<>/Modules/Core/SpatialObjects/include/itkBoxSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ModelToImageRegistration2.cxx:98:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ModelToImageRegistration2.cxx:103:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/ITKv3ModelToImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ModelToImageRegistration2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ModelToImageRegistration2.dir/ModelToImageRegistration2.cxx.o -o ../../bin/ITKv3ModelToImageRegistration2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target ITKv3ModelToImageRegistration2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration12.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration12.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration12.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration12 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration12.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration12.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration12.dir/ImageRegistration12.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformationFieldJacobian.dir/DeformationFieldJacobian.cxx.o -c /<>/Examples/RegistrationITKv3/DeformationFieldJacobian.cxx In file included from /<>/Examples/RegistrationITKv3/DeformationFieldJacobian.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Examples/RegistrationITKv3/DeformationFieldJacobian.cxx:22: /<>/Modules/Compatibility/V3Compatibility/include/itkDeformationFieldJacobianDeterminantFilter.h:137:21: warning: 'EvaluateAtNeighborhood' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual TRealType EvaluateAtNeighborhood(const ConstNeighborhoodIteratorType & it) const; ^ /<>/Examples/RegistrationITKv3/DeformationFieldJacobian.cxx:50:3: note: in instantiation of template class 'itk::DeformationFieldJacobianDeterminantFilter, 3>, float, itk::Image >' requested here FilterType::Pointer filter = FilterType::New(); ^ /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldJacobianDeterminantFilter.h:237:21: note: overridden virtual function is here virtual TRealType EvaluateAtNeighborhood(const ConstNeighborhoodIteratorType & it) const; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/ITKv3DeformationFieldJacobian make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformationFieldJacobian.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformationFieldJacobian.dir/DeformationFieldJacobian.cxx.o -o ../../bin/ITKv3DeformationFieldJacobian -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target ITKv3DeformationFieldJacobian make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration14.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration14.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration14.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration14 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration14.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration14.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration14.dir/ImageRegistration14.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ThinPlateSplineWarp.dir/ThinPlateSplineWarp.cxx.o -c /<>/Examples/RegistrationITKv3/ThinPlateSplineWarp.cxx In file included from /<>/Examples/RegistrationITKv3/ThinPlateSplineWarp.cxx:28: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/ITKv3ThinPlateSplineWarp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ThinPlateSplineWarp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ThinPlateSplineWarp.dir/ThinPlateSplineWarp.cxx.o -o ../../bin/ITKv3ThinPlateSplineWarp -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target ITKv3ThinPlateSplineWarp make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3MultiResImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration2.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration2.dir/MultiResImageRegistration2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3IterativeClosestPoint3.dir/IterativeClosestPoint3.cxx.o -c /<>/Examples/RegistrationITKv3/IterativeClosestPoint3.cxx In file included from /<>/Examples/RegistrationITKv3/IterativeClosestPoint3.cxx:32: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/ITKv3IterativeClosestPoint3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3IterativeClosestPoint3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3IterativeClosestPoint3.dir/IterativeClosestPoint3.cxx.o -o ../../bin/ITKv3IterativeClosestPoint3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target ITKv3IterativeClosestPoint3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration2.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration2.dir/ImageRegistration2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableRegistration12.dir/DeformableRegistration12.cxx.o -c /<>/Examples/RegistrationITKv4/DeformableRegistration12.cxx In file included from /<>/Examples/RegistrationITKv4/DeformableRegistration12.cxx:35: In file included from /<>/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23: In file included from /<>/Modules/Core/Transform/include/itkCompositeTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMultiTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 82%] Linking CXX executable ../../bin/DeformableRegistration12 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableRegistration12.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableRegistration12.dir/DeformableRegistration12.cxx.o -o ../../bin/DeformableRegistration12 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 82%] Built target DeformableRegistration12 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration5.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration5.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration5.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration5 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration5.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration5.dir/build make[3]: Entering directory '/<>/BUILD' [ 82%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration5.dir/DeformableRegistration5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration16.dir/ImageRegistration16.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration16.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration16.cxx:28: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration16.cxx:64:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration16.cxx:69:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration16 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration16.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration16.dir/ImageRegistration16.cxx.o -o ../../bin/ITKv3ImageRegistration16 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration16 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistrationHistogramPlotter.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistrationHistogramPlotter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistrationHistogramPlotter.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistrationHistogramPlotter make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistrationHistogramPlotter.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistrationHistogramPlotter.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistrationHistogramPlotter.dir/ImageRegistrationHistogramPlotter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration17.dir/DeformableRegistration17.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration17.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration17.cxx:92: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration17.cxx:135:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object *, const itk::EventObject & ) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration17.cxx:140:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration17.cxx:176:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration17.cxx:180:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object *, const itk::EventObject & ) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 5 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration17 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration17.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration17.dir/DeformableRegistration17.cxx.o -o ../../bin/ITKv3DeformableRegistration17 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration17 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration7.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration7.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration7.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration7 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration7.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration7.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration7.dir/ImageRegistration7.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration16.dir/DeformableRegistration16.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration16.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration16.cxx:92: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration16.cxx:134:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object *, const itk::EventObject & ) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration16.cxx:139:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration16.cxx:175:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration16.cxx:179:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object *, const itk::EventObject & ) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 5 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration16 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration16.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration16.dir/DeformableRegistration16.cxx.o -o ../../bin/ITKv3DeformableRegistration16 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration16 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3LandmarkWarping2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3LandmarkWarping2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3LandmarkWarping2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3LandmarkWarping2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3LandmarkWarping2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3LandmarkWarping2.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3LandmarkWarping2.dir/LandmarkWarping2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration14.dir/ImageRegistration14.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration14.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration14.cxx:28: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration14.cxx:63:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration14.cxx:68:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration14 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration14.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration14.dir/ImageRegistration14.cxx.o -o ../../bin/ITKv3ImageRegistration14 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration14 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration6.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration6.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration6.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration6 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration6.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration6.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration6.dir/ImageRegistration6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration12.dir/ImageRegistration12.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration12.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration12.cxx:29: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration12.cxx:76:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration12.cxx:81:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration12 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration12.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration12.dir/ImageRegistration12.cxx.o -o ../../bin/ITKv3ImageRegistration12 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration12 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration10.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration10.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration10.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration10 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration10.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration10.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration10.dir/ImageRegistration10.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3MultiResImageRegistration2.dir/MultiResImageRegistration2.cxx.o -c /<>/Examples/RegistrationITKv3/MultiResImageRegistration2.cxx In file included from /<>/Examples/RegistrationITKv3/MultiResImageRegistration2.cxx:52: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration2.cxx:88:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration2.cxx:93:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration2.cxx:131:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object * object, const itk::EventObject & event) ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration2.cxx:432:3: note: in instantiation of template class 'RegistrationInterfaceCommand, itk::Image > >' requested here CommandType::Pointer command = CommandType::New(); ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration2.cxx:156:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * , const itk::EventObject & ) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 5 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3MultiResImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3MultiResImageRegistration2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3MultiResImageRegistration2.dir/MultiResImageRegistration2.cxx.o -o ../../bin/ITKv3MultiResImageRegistration2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3MultiResImageRegistration2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration12.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration12.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration12.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration12 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration12.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration12.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration12.dir/DeformableRegistration12.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration2.dir/ImageRegistration2.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration2.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration2.cxx:44: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration2.cxx:110:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration2.cxx:115:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration2.dir/ImageRegistration2.cxx.o -o ../../bin/ITKv3ImageRegistration2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration4.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration4.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration4.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration4 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration4.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration4.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration4.dir/ImageRegistration4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3LandmarkWarping2.dir/LandmarkWarping2.cxx.o -c /<>/Examples/RegistrationITKv3/LandmarkWarping2.cxx In file included from /<>/Examples/RegistrationITKv3/LandmarkWarping2.cxx:31: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3LandmarkWarping2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3LandmarkWarping2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3LandmarkWarping2.dir/LandmarkWarping2.cxx.o -o ../../bin/ITKv3LandmarkWarping2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3LandmarkWarping2 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration14.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration14.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration14.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration14 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration14.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration14.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration14.dir/DeformableRegistration14.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration5.dir/DeformableRegistration5.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration5.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration5.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration5.cxx:62:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration5.cxx:67:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration5 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration5.dir/DeformableRegistration5.cxx.o -o ../../bin/ITKv3DeformableRegistration5 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration5 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration4.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration4.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration4.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration4 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration4.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration4.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration4.dir/DeformableRegistration4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration7.dir/ImageRegistration7.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration7.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration7.cxx:55: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration7.cxx:106:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration7.cxx:111:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration7 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration7.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration7.dir/ImageRegistration7.cxx.o -o ../../bin/ITKv3ImageRegistration7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration7 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DisplacementFieldInitialization.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DisplacementFieldInitialization.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DisplacementFieldInitialization.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DisplacementFieldInitialization make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DisplacementFieldInitialization.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DisplacementFieldInitialization.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DisplacementFieldInitialization.dir/DisplacementFieldInitialization.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistrationHistogramPlotter.dir/ImageRegistrationHistogramPlotter.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistrationHistogramPlotter.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistrationHistogramPlotter.cxx:102: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistrationHistogramPlotter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistrationHistogramPlotter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistrationHistogramPlotter.dir/ImageRegistrationHistogramPlotter.cxx.o -o ../../bin/ITKv3ImageRegistrationHistogramPlotter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistrationHistogramPlotter make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration3.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration3.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration3.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration3.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration3.dir/ImageRegistration3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration6.dir/ImageRegistration6.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration6.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration6.cxx:70: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration6.cxx:118:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration6.cxx:123:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration6 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration6.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration6.dir/ImageRegistration6.cxx.o -o ../../bin/ITKv3ImageRegistration6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration6 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration13.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration13.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration10.dir/ImageRegistration10.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration10.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration10.cxx:31: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration10.cxx:67:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration10.cxx:72:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration13.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration13 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration13.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration13.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration10 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration13.dir/ImageRegistration13.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration10.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration10.dir/ImageRegistration10.cxx.o -o ../../bin/ITKv3ImageRegistration10 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration10 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration5.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration5.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration5.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration5 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration5.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration5.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration5.dir/ImageRegistration5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DisplacementFieldInitialization.dir/DisplacementFieldInitialization.cxx.o -c /<>/Examples/RegistrationITKv3/DisplacementFieldInitialization.cxx In file included from /<>/Examples/RegistrationITKv3/DisplacementFieldInitialization.cxx:37: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DisplacementFieldInitialization make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DisplacementFieldInitialization.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DisplacementFieldInitialization.dir/DisplacementFieldInitialization.cxx.o -o ../../bin/ITKv3DisplacementFieldInitialization -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DisplacementFieldInitialization make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3BSplineWarping1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3BSplineWarping1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3BSplineWarping1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3BSplineWarping1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3BSplineWarping1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3BSplineWarping1.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration4.dir/ImageRegistration4.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration4.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration4.cxx:54: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration4.cxx:89:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration4.cxx:94:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3BSplineWarping1.dir/BSplineWarping1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration4.dir/ImageRegistration4.cxx.o -o ../../bin/ITKv3ImageRegistration4 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration4 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration18.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration18.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration18.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration18 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration18.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration18.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration18.dir/ImageRegistration18.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration12.dir/DeformableRegistration12.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration12.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration12.cxx:35: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration12.cxx:95:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration12.cxx:100:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration12 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration12.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration12.dir/DeformableRegistration12.cxx.o -o ../../bin/ITKv3DeformableRegistration12 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration12 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration15.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration15.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration15.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration15 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration15.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration15.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration15.dir/ImageRegistration15.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration4.dir/DeformableRegistration4.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration4.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration4.cxx:38: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration4 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration4.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration4.dir/DeformableRegistration4.cxx.o -o ../../bin/ITKv3DeformableRegistration4 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration4 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration3.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration3.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration3.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration3.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration3.dir/DeformableRegistration3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration14.dir/DeformableRegistration14.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration14.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration14.cxx:32: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration14.cxx:80:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration14.cxx:85:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration14 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration14.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration14.dir/DeformableRegistration14.cxx.o -o ../../bin/ITKv3DeformableRegistration14 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration14 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration9.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration9.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration9.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration9 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration9.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration9.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration9.dir/ImageRegistration9.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration3.dir/ImageRegistration3.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration3.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration3.cxx:60: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration3.cxx:180:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration3.cxx:196:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration3.dir/ImageRegistration3.cxx.o -o ../../bin/ITKv3ImageRegistration3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration19.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration19.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration19.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration19 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration19.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration19.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration19.dir/ImageRegistration19.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration13.dir/ImageRegistration13.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration13.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration13.cxx:27: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration13.cxx:66:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration13.cxx:71:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration13 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3BSplineWarping1.dir/BSplineWarping1.cxx.o -c /<>/Examples/RegistrationITKv3/BSplineWarping1.cxx In file included from /<>/Examples/RegistrationITKv3/BSplineWarping1.cxx:29: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/BSplineWarping1.cxx:57:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/BSplineWarping1.cxx:62:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3BSplineWarping1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration5.dir/ImageRegistration5.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration5.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration5.cxx:51: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration5.cxx:97:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration5.cxx:102:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration13.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration13.dir/ImageRegistration13.cxx.o -o ../../bin/ITKv3ImageRegistration13 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration5 make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration13 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration11.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration11.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3BSplineWarping1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3BSplineWarping1.dir/BSplineWarping1.cxx.o -o ../../bin/ITKv3BSplineWarping1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration11.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration11 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration11.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration11.dir/build make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3BSplineWarping1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration8.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration8.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration11.dir/ImageRegistration11.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration8.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration8 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration8.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration8.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration8.dir/DeformableRegistration8.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration5.dir/ImageRegistration5.cxx.o -o ../../bin/ITKv3ImageRegistration5 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration5 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration9.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration9.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration9.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration9 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration9.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration9.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration9.dir/DeformableRegistration9.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration15.dir/ImageRegistration15.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration15.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration15.cxx:28: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration15.cxx:61:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration15.cxx:66:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration15 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration15.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration15.dir/ImageRegistration15.cxx.o -o ../../bin/ITKv3ImageRegistration15 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration15 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration8.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration8.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration8.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration8 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration8.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration8.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration8.dir/ImageRegistration8.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration18.dir/ImageRegistration18.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration18.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration18.cxx:34: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration18.cxx:59:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration18.cxx:64:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration18 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration18.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration18.dir/ImageRegistration18.cxx.o -o ../../bin/ITKv3ImageRegistration18 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration18 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration10.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration10.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration3.dir/DeformableRegistration3.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration3.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration3.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration3.cxx:71:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration3.cxx:76:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration10.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration10 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration10.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration10.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration10.dir/DeformableRegistration10.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration3.dir/DeformableRegistration3.cxx.o -o ../../bin/ITKv3DeformableRegistration3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3MultiResImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration1.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration1.dir/MultiResImageRegistration1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration9.dir/ImageRegistration9.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration9.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration9.cxx:42: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration9.cxx:91:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration9.cxx:96:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration9 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration9.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration9.dir/ImageRegistration9.cxx.o -o ../../bin/ITKv3ImageRegistration9 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration9 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration6.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration6.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration6.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration6 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration6.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration6.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration6.dir/DeformableRegistration6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration19.dir/ImageRegistration19.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration19.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration19.cxx:19: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration19.cxx:55:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration19.cxx:60:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration19 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration19.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration19.dir/ImageRegistration19.cxx.o -o ../../bin/ITKv3ImageRegistration19 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration19 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration3.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration3.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration3.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3MultiResImageRegistration3 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration3.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration3.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3MultiResImageRegistration3.dir/MultiResImageRegistration3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration9.dir/DeformableRegistration9.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx:27: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx:64:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx:69:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx:30: /<>/Modules/Registration/PDEDeformable/include/itkCurvatureRegistrationFilter.h:180:16: warning: 'Initialize' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void Initialize(); ^ /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx:71:50: note: in instantiation of template class 'itk::CurvatureRegistrationFilter, itk::Image, itk::Image, 2>, itk::FastSymmetricForcesDemonsRegistrationFunction, itk::Image, itk::Image, 2> > >' requested here const RegistrationFilterType * filter = static_cast< const RegistrationFilterType * >( object ); ^ /<>/Modules/Registration/PDEDeformable/include/itkPDEDeformableRegistrationFilter.h:281:16: note: overridden virtual function is here virtual void Initialize() ITK_OVERRIDE; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx:30: /<>/Modules/Registration/PDEDeformable/include/itkCurvatureRegistrationFilter.h:183:16: warning: 'ApplyUpdate' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void ApplyUpdate(const TimeStepType& dt); ^ /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:131:16: note: overridden virtual function is here virtual void ApplyUpdate(const TimeStepType& dt) ITK_OVERRIDE; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx:31: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:131:24: warning: 'ComputeGlobalTimeStep' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual TimeStepType ComputeGlobalTimeStep( void *itkNotUsed(GlobalData) ) const ^ /<>/Modules/Registration/PDEDeformable/include/itkCurvatureRegistrationFilter.hxx:199:5: note: in instantiation of template class 'itk::FastSymmetricForcesDemonsRegistrationFunction, itk::Image, itk::Image, 2> >' requested here dynamic_cast< RegistrationFunctionType * > ^ /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx:76:30: note: in instantiation of member function 'itk::CurvatureRegistrationFilter, itk::Image, itk::Image, 2>, itk::FastSymmetricForcesDemonsRegistrationFunction, itk::Image, itk::Image, 2> > >::GetMetric' requested here std::cout << filter->GetMetric() << std::endl; ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:165:24: note: overridden virtual function is here virtual TimeStepType ComputeGlobalTimeStep(void *GlobalData) const = 0; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx:31: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:138:18: warning: 'GetGlobalDataPointer' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void * GetGlobalDataPointer() const ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:174:18: note: overridden virtual function is here virtual void * GetGlobalDataPointer() const = 0; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx:31: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:149:16: warning: 'ReleaseGlobalDataPointer' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void ReleaseGlobalDataPointer(void *GlobalData) const; ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:181:16: note: overridden virtual function is here virtual void ReleaseGlobalDataPointer(void *GlobalData) const = 0; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx:31: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:152:16: warning: 'InitializeIteration' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void InitializeIteration(); ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:118:16: note: overridden virtual function is here virtual void InitializeIteration() {} ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration9.cxx:31: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:156:22: warning: 'ComputeUpdate' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual PixelType ComputeUpdate( const NeighborhoodType & neighborhood, ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:133:22: note: overridden virtual function is here virtual PixelType ComputeUpdate( const NeighborhoodType & neighborhood, ^ 10 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration9 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration9.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration9.dir/DeformableRegistration9.cxx.o -o ../../bin/ITKv3DeformableRegistration9 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration9 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration20.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration20.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration20.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ImageRegistration20 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration20.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration20.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ImageRegistration20.dir/ImageRegistration20.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration11.dir/ImageRegistration11.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration11.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration11.cxx:38: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration11.cxx:72:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration11.cxx:77:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration11 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration11.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration11.dir/ImageRegistration11.cxx.o -o ../../bin/ITKv3ImageRegistration11 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration11 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration13.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration13.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration13.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration13 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration13.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration13.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration13.dir/DeformableRegistration13.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration8.dir/DeformableRegistration8.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration8.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration8.cxx:33: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration8.cxx:95:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration8.cxx:100:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration8 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration8.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration8.dir/DeformableRegistration8.cxx.o -o ../../bin/ITKv3DeformableRegistration8 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration8 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration7.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration7.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration7.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration7 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration7.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration7.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration7.dir/DeformableRegistration7.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration8.dir/ImageRegistration8.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration8.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration8.cxx:47: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration8.cxx:107:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration8.cxx:111:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ In file included from /<>/Examples/RegistrationITKv3/ImageRegistration8.cxx:59: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Examples/RegistrationITKv3/ImageRegistration8.cxx:181:3: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here TransformType::Pointer transform = TransformType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Examples/RegistrationITKv3/ImageRegistration8.cxx:59: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Examples/RegistrationITKv3/ImageRegistration8.cxx:181:3: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here TransformType::Pointer transform = TransformType::New(); ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 5 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration8 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration8.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration8.dir/ImageRegistration8.cxx.o -o ../../bin/ITKv3ImageRegistration8 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration8 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration1 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration1.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration1.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration1.dir/DeformableRegistration1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration6.dir/DeformableRegistration6.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration6.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration6.cxx:38: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration6 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration6.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration6.dir/DeformableRegistration6.cxx.o -o ../../bin/ITKv3DeformableRegistration6 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration6 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration11.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration11.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration11.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration11 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration11.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration11.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration11.dir/DeformableRegistration11.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration10.dir/DeformableRegistration10.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx:25: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx:63:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx:68:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx:28: /<>/Modules/Registration/PDEDeformable/include/itkCurvatureRegistrationFilter.h:180:16: warning: 'Initialize' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void Initialize(); ^ /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx:70:50: note: in instantiation of template class 'itk::CurvatureRegistrationFilter, itk::Image, itk::Image, 3>, itk::FastSymmetricForcesDemonsRegistrationFunction, itk::Image, itk::Image, 3> > >' requested here const RegistrationFilterType * filter = static_cast< const RegistrationFilterType * >( object ); ^ /<>/Modules/Registration/PDEDeformable/include/itkPDEDeformableRegistrationFilter.h:281:16: note: overridden virtual function is here virtual void Initialize() ITK_OVERRIDE; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx:28: /<>/Modules/Registration/PDEDeformable/include/itkCurvatureRegistrationFilter.h:183:16: warning: 'ApplyUpdate' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void ApplyUpdate(const TimeStepType& dt); ^ /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:131:16: note: overridden virtual function is here virtual void ApplyUpdate(const TimeStepType& dt) ITK_OVERRIDE; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx:29: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:131:24: warning: 'ComputeGlobalTimeStep' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual TimeStepType ComputeGlobalTimeStep( void *itkNotUsed(GlobalData) ) const ^ /<>/Modules/Registration/PDEDeformable/include/itkCurvatureRegistrationFilter.hxx:199:5: note: in instantiation of template class 'itk::FastSymmetricForcesDemonsRegistrationFunction, itk::Image, itk::Image, 3> >' requested here dynamic_cast< RegistrationFunctionType * > ^ /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx:75:30: note: in instantiation of member function 'itk::CurvatureRegistrationFilter, itk::Image, itk::Image, 3>, itk::FastSymmetricForcesDemonsRegistrationFunction, itk::Image, itk::Image, 3> > >::GetMetric' requested here std::cout << filter->GetMetric() << std::endl; ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:165:24: note: overridden virtual function is here virtual TimeStepType ComputeGlobalTimeStep(void *GlobalData) const = 0; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx:29: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:138:18: warning: 'GetGlobalDataPointer' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void * GetGlobalDataPointer() const ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:174:18: note: overridden virtual function is here virtual void * GetGlobalDataPointer() const = 0; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx:29: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:149:16: warning: 'ReleaseGlobalDataPointer' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void ReleaseGlobalDataPointer(void *GlobalData) const; ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:181:16: note: overridden virtual function is here virtual void ReleaseGlobalDataPointer(void *GlobalData) const = 0; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx:29: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:152:16: warning: 'InitializeIteration' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void InitializeIteration(); ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:118:16: note: overridden virtual function is here virtual void InitializeIteration() {} ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration10.cxx:29: /<>/Modules/Registration/PDEDeformable/include/itkFastSymmetricForcesDemonsRegistrationFunction.h:156:22: warning: 'ComputeUpdate' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual PixelType ComputeUpdate( const NeighborhoodType & neighborhood, ^ /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:133:22: note: overridden virtual function is here virtual PixelType ComputeUpdate( const NeighborhoodType & neighborhood, ^ 10 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration10 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration10.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration10.dir/DeformableRegistration10.cxx.o -o ../../bin/ITKv3DeformableRegistration10 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration10 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3BSplineWarping2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3BSplineWarping2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3BSplineWarping2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3BSplineWarping2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3BSplineWarping2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3BSplineWarping2.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3BSplineWarping2.dir/BSplineWarping2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3MultiResImageRegistration1.dir/MultiResImageRegistration1.cxx.o -c /<>/Examples/RegistrationITKv3/MultiResImageRegistration1.cxx In file included from /<>/Examples/RegistrationITKv3/MultiResImageRegistration1.cxx:45: In file included from /<>/Modules/Registration/Common/include/itkMultiResolutionImageRegistrationMethod.h:22: In file included from /<>/Modules/Registration/Common/include/itkImageToImageMetric.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration1.cxx:268:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration1.cxx:273:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration1.cxx:170:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object * object, const itk::EventObject & event) ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration1.cxx:510:3: note: in instantiation of template class 'RegistrationInterfaceCommand, itk::Image > >' requested here CommandType::Pointer command = CommandType::New(); ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration1.cxx:244:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * , const itk::EventObject & ) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 5 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3MultiResImageRegistration1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3MultiResImageRegistration1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3MultiResImageRegistration1.dir/MultiResImageRegistration1.cxx.o -o ../../bin/ITKv3MultiResImageRegistration1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3MultiResImageRegistration1 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration2 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration2.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration2.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration2.dir/DeformableRegistration2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ImageRegistration20.dir/ImageRegistration20.cxx.o -c /<>/Examples/RegistrationITKv3/ImageRegistration20.cxx In file included from /<>/Examples/RegistrationITKv3/ImageRegistration20.cxx:34: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/ImageRegistration20.cxx:81:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/ImageRegistration20.cxx:86:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ImageRegistration20 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ImageRegistration20.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ImageRegistration20.dir/ImageRegistration20.cxx.o -o ../../bin/ITKv3ImageRegistration20 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ImageRegistration20 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ChangeInformationImageFilter.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ChangeInformationImageFilter.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3ChangeInformationImageFilter.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3ChangeInformationImageFilter make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3ChangeInformationImageFilter.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3ChangeInformationImageFilter.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3ChangeInformationImageFilter.dir/ChangeInformationImageFilter.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3MultiResImageRegistration3.dir/MultiResImageRegistration3.cxx.o -c /<>/Examples/RegistrationITKv3/MultiResImageRegistration3.cxx In file included from /<>/Examples/RegistrationITKv3/MultiResImageRegistration3.cxx:23: In file included from /<>/Modules/Registration/Common/include/itkMultiResolutionImageRegistrationMethod.h:22: In file included from /<>/Modules/Registration/Common/include/itkImageToImageMetric.h:21: In file included from /<>/Modules/Core/Transform/include/itkBSplineBaseTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration3.cxx:106:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration3.cxx:111:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration3.cxx:56:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object * object, const itk::EventObject & event) ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration3.cxx:268:3: note: in instantiation of template class 'RegistrationInterfaceCommand, itk::Image > >' requested here CommandType::Pointer command = CommandType::New(); ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/MultiResImageRegistration3.cxx:83:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * , const itk::EventObject & ) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 5 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3MultiResImageRegistration3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3MultiResImageRegistration3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3MultiResImageRegistration3.dir/MultiResImageRegistration3.cxx.o -o ../../bin/ITKv3MultiResImageRegistration3 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3MultiResImageRegistration3 make[2]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration15.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration15.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Examples/RegistrationITKv3 /<>/BUILD /<>/BUILD/Examples/RegistrationITKv3 /<>/BUILD/Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration15.dir/DependInfo.cmake --color= Scanning dependencies of target ITKv3DeformableRegistration15 make[3]: Leaving directory '/<>/BUILD' make -f Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration15.dir/build.make Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration15.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Examples/RegistrationITKv3/CMakeFiles/ITKv3DeformableRegistration15.dir/DeformableRegistration15.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration13.dir/DeformableRegistration13.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration13.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration13.cxx:33: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration13.cxx:81:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration13.cxx:86:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration13 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration13.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration13.dir/DeformableRegistration13.cxx.o -o ../../bin/ITKv3DeformableRegistration13 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration13 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommon-all.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommon-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Common /<>/BUILD /<>/BUILD/Modules/Core/Common /<>/BUILD/Modules/Core/Common/CMakeFiles/ITKCommon-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCommon-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Common/CMakeFiles/ITKCommon-all.dir/build.make Modules/Core/Common/CMakeFiles/ITKCommon-all.dir/build make[3]: Nothing to be done for 'Modules/Core/Common/CMakeFiles/ITKCommon-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKCommon-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFilterBase/CMakeFiles/ITKImageFilterBase-all.dir/build.make Modules/Filtering/ImageFilterBase/CMakeFiles/ITKImageFilterBase-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFilterBase /<>/BUILD /<>/BUILD/Modules/Filtering/ImageFilterBase /<>/BUILD/Modules/Filtering/ImageFilterBase/CMakeFiles/ITKImageFilterBase-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFilterBase-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFilterBase/CMakeFiles/ITKImageFilterBase-all.dir/build.make Modules/Filtering/ImageFilterBase/CMakeFiles/ITKImageFilterBase-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/ImageFilterBase/CMakeFiles/ITKImageFilterBase-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKImageFilterBase-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/CurvatureFlow/CMakeFiles/ITKCurvatureFlow-all.dir/build.make Modules/Filtering/CurvatureFlow/CMakeFiles/ITKCurvatureFlow-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/CurvatureFlow /<>/BUILD /<>/BUILD/Modules/Filtering/CurvatureFlow /<>/BUILD/Modules/Filtering/CurvatureFlow/CMakeFiles/ITKCurvatureFlow-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKCurvatureFlow-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/CurvatureFlow/CMakeFiles/ITKCurvatureFlow-all.dir/build.make Modules/Filtering/CurvatureFlow/CMakeFiles/ITKCurvatureFlow-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/CurvatureFlow/CMakeFiles/ITKCurvatureFlow-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKCurvatureFlow-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/ImageAdaptors/CMakeFiles/ITKImageAdaptors-all.dir/build.make Modules/Core/ImageAdaptors/CMakeFiles/ITKImageAdaptors-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/ImageAdaptors /<>/BUILD /<>/BUILD/Modules/Core/ImageAdaptors /<>/BUILD/Modules/Core/ImageAdaptors/CMakeFiles/ITKImageAdaptors-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageAdaptors-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/ImageAdaptors/CMakeFiles/ITKImageAdaptors-all.dir/build.make Modules/Core/ImageAdaptors/CMakeFiles/ITKImageAdaptors-all.dir/build make[3]: Nothing to be done for 'Modules/Core/ImageAdaptors/CMakeFiles/ITKImageAdaptors-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKImageAdaptors-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Statistics/CMakeFiles/ITKStatistics-all.dir/build.make Modules/Numerics/Statistics/CMakeFiles/ITKStatistics-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Statistics /<>/BUILD /<>/BUILD/Modules/Numerics/Statistics /<>/BUILD/Modules/Numerics/Statistics/CMakeFiles/ITKStatistics-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKStatistics-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Statistics/CMakeFiles/ITKStatistics-all.dir/build.make Modules/Numerics/Statistics/CMakeFiles/ITKStatistics-all.dir/build make[3]: Nothing to be done for 'Modules/Numerics/Statistics/CMakeFiles/ITKStatistics-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKStatistics-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Transform/CMakeFiles/ITKTransform-all.dir/build.make Modules/Core/Transform/CMakeFiles/ITKTransform-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Transform /<>/BUILD /<>/BUILD/Modules/Core/Transform /<>/BUILD/Modules/Core/Transform/CMakeFiles/ITKTransform-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTransform-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Transform/CMakeFiles/ITKTransform-all.dir/build.make Modules/Core/Transform/CMakeFiles/ITKTransform-all.dir/build make[3]: Nothing to be done for 'Modules/Core/Transform/CMakeFiles/ITKTransform-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKTransform-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/ImageFunction/CMakeFiles/ITKImageFunction-all.dir/build.make Modules/Core/ImageFunction/CMakeFiles/ITKImageFunction-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/ImageFunction /<>/BUILD /<>/BUILD/Modules/Core/ImageFunction /<>/BUILD/Modules/Core/ImageFunction/CMakeFiles/ITKImageFunction-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFunction-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/ImageFunction/CMakeFiles/ITKImageFunction-all.dir/build.make Modules/Core/ImageFunction/CMakeFiles/ITKImageFunction-all.dir/build make[3]: Nothing to be done for 'Modules/Core/ImageFunction/CMakeFiles/ITKImageFunction-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKImageFunction-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageGrid/CMakeFiles/ITKImageGrid-all.dir/build.make Modules/Filtering/ImageGrid/CMakeFiles/ITKImageGrid-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageGrid /<>/BUILD /<>/BUILD/Modules/Filtering/ImageGrid /<>/BUILD/Modules/Filtering/ImageGrid/CMakeFiles/ITKImageGrid-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageGrid-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageGrid/CMakeFiles/ITKImageGrid-all.dir/build.make Modules/Filtering/ImageGrid/CMakeFiles/ITKImageGrid-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/ImageGrid/CMakeFiles/ITKImageGrid-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKImageGrid-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/AnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothing-all.dir/build.make Modules/Filtering/AnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothing-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/AnisotropicSmoothing /<>/BUILD /<>/BUILD/Modules/Filtering/AnisotropicSmoothing /<>/BUILD/Modules/Filtering/AnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothing-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAnisotropicSmoothing-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/AnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothing-all.dir/build.make Modules/Filtering/AnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothing-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/AnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothing-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKAnisotropicSmoothing-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/ImageBase/CMakeFiles/ITKIOImageBase-all.dir/build.make Modules/IO/ImageBase/CMakeFiles/ITKIOImageBase-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/ImageBase /<>/BUILD /<>/BUILD/Modules/IO/ImageBase /<>/BUILD/Modules/IO/ImageBase/CMakeFiles/ITKIOImageBase-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOImageBase-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/ImageBase/CMakeFiles/ITKIOImageBase-all.dir/build.make Modules/IO/ImageBase/CMakeFiles/ITKIOImageBase-all.dir/build make[3]: Nothing to be done for 'Modules/IO/ImageBase/CMakeFiles/ITKIOImageBase-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOImageBase-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/BMP/CMakeFiles/ITKIOBMP-all.dir/build.make Modules/IO/BMP/CMakeFiles/ITKIOBMP-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BMP /<>/BUILD /<>/BUILD/Modules/IO/BMP /<>/BUILD/Modules/IO/BMP/CMakeFiles/ITKIOBMP-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBMP-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/BMP/CMakeFiles/ITKIOBMP-all.dir/build.make Modules/IO/BMP/CMakeFiles/ITKIOBMP-all.dir/build make[3]: Nothing to be done for 'Modules/IO/BMP/CMakeFiles/ITKIOBMP-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOBMP-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/GDCM/CMakeFiles/ITKIOGDCM-all.dir/build.make Modules/IO/GDCM/CMakeFiles/ITKIOGDCM-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GDCM /<>/BUILD /<>/BUILD/Modules/IO/GDCM /<>/BUILD/Modules/IO/GDCM/CMakeFiles/ITKIOGDCM-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGDCM-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GDCM/CMakeFiles/ITKIOGDCM-all.dir/build.make Modules/IO/GDCM/CMakeFiles/ITKIOGDCM-all.dir/build make[3]: Nothing to be done for 'Modules/IO/GDCM/CMakeFiles/ITKIOGDCM-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOGDCM-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/GIPL/CMakeFiles/ITKIOGIPL-all.dir/build.make Modules/IO/GIPL/CMakeFiles/ITKIOGIPL-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GIPL /<>/BUILD /<>/BUILD/Modules/IO/GIPL /<>/BUILD/Modules/IO/GIPL/CMakeFiles/ITKIOGIPL-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGIPL-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GIPL/CMakeFiles/ITKIOGIPL-all.dir/build.make Modules/IO/GIPL/CMakeFiles/ITKIOGIPL-all.dir/build make[3]: Nothing to be done for 'Modules/IO/GIPL/CMakeFiles/ITKIOGIPL-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOGIPL-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/JPEG/CMakeFiles/ITKIOJPEG-all.dir/build.make Modules/IO/JPEG/CMakeFiles/ITKIOJPEG-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/JPEG /<>/BUILD /<>/BUILD/Modules/IO/JPEG /<>/BUILD/Modules/IO/JPEG/CMakeFiles/ITKIOJPEG-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOJPEG-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/JPEG/CMakeFiles/ITKIOJPEG-all.dir/build.make Modules/IO/JPEG/CMakeFiles/ITKIOJPEG-all.dir/build make[3]: Nothing to be done for 'Modules/IO/JPEG/CMakeFiles/ITKIOJPEG-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOJPEG-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Meta/CMakeFiles/ITKIOMeta-all.dir/build.make Modules/IO/Meta/CMakeFiles/ITKIOMeta-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Meta /<>/BUILD /<>/BUILD/Modules/IO/Meta /<>/BUILD/Modules/IO/Meta/CMakeFiles/ITKIOMeta-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMeta-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Meta/CMakeFiles/ITKIOMeta-all.dir/build.make Modules/IO/Meta/CMakeFiles/ITKIOMeta-all.dir/build make[3]: Nothing to be done for 'Modules/IO/Meta/CMakeFiles/ITKIOMeta-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOMeta-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/build.make Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NIFTI/test /<>/BUILD /<>/BUILD/Modules/IO/NIFTI/test /<>/BUILD/Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONIFTITestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/build.make Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/ITKIONIFTITestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration7.dir/DeformableRegistration7.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration7.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration7.cxx:39: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration7.cxx:98:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration7.cxx:103:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration7 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3ChangeInformationImageFilter.dir/ChangeInformationImageFilter.cxx.o -c /<>/Examples/RegistrationITKv3/ChangeInformationImageFilter.cxx In file included from /<>/Examples/RegistrationITKv3/ChangeInformationImageFilter.cxx:36: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3ChangeInformationImageFilter make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration7.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration7.dir/DeformableRegistration7.cxx.o -o ../../bin/ITKv3DeformableRegistration7 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration7 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/NRRD/CMakeFiles/ITKIONRRD-all.dir/build.make Modules/IO/NRRD/CMakeFiles/ITKIONRRD-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NRRD /<>/BUILD /<>/BUILD/Modules/IO/NRRD /<>/BUILD/Modules/IO/NRRD/CMakeFiles/ITKIONRRD-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONRRD-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/NRRD/CMakeFiles/ITKIONRRD-all.dir/build.make Modules/IO/NRRD/CMakeFiles/ITKIONRRD-all.dir/build make[3]: Nothing to be done for 'Modules/IO/NRRD/CMakeFiles/ITKIONRRD-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIONRRD-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/PNG/CMakeFiles/ITKIOPNG-all.dir/build.make Modules/IO/PNG/CMakeFiles/ITKIOPNG-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3ChangeInformationImageFilter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3ChangeInformationImageFilter.dir/ChangeInformationImageFilter.cxx.o -o ../../bin/ITKv3ChangeInformationImageFilter -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3ChangeInformationImageFilter make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TIFF/CMakeFiles/ITKIOTIFF-all.dir/build.make Modules/IO/TIFF/CMakeFiles/ITKIOTIFF-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/PNG /<>/BUILD /<>/BUILD/Modules/IO/PNG /<>/BUILD/Modules/IO/PNG/CMakeFiles/ITKIOPNG-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOPNG-all make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TIFF /<>/BUILD /<>/BUILD/Modules/IO/TIFF /<>/BUILD/Modules/IO/TIFF/CMakeFiles/ITKIOTIFF-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTIFF-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/PNG/CMakeFiles/ITKIOPNG-all.dir/build.make Modules/IO/PNG/CMakeFiles/ITKIOPNG-all.dir/build make -f Modules/IO/TIFF/CMakeFiles/ITKIOTIFF-all.dir/build.make Modules/IO/TIFF/CMakeFiles/ITKIOTIFF-all.dir/build make[3]: Nothing to be done for 'Modules/IO/PNG/CMakeFiles/ITKIOPNG-all.dir/build'. make[3]: Nothing to be done for 'Modules/IO/TIFF/CMakeFiles/ITKIOTIFF-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOPNG-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/VTK/CMakeFiles/ITKIOVTK-all.dir/build.make Modules/IO/VTK/CMakeFiles/ITKIOVTK-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/VTK /<>/BUILD /<>/BUILD/Modules/IO/VTK /<>/BUILD/Modules/IO/VTK/CMakeFiles/ITKIOVTK-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOVTK-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/VTK/CMakeFiles/ITKIOVTK-all.dir/build.make Modules/IO/VTK/CMakeFiles/ITKIOVTK-all.dir/build make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOTIFF-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/TestKernel/CMakeFiles/ITKTestKernel-all.dir/build.make Modules/Core/TestKernel/CMakeFiles/ITKTestKernel-all.dir/depend make[3]: Nothing to be done for 'Modules/IO/VTK/CMakeFiles/ITKIOVTK-all.dir/build'. make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/TestKernel /<>/BUILD /<>/BUILD/Modules/Core/TestKernel /<>/BUILD/Modules/Core/TestKernel/CMakeFiles/ITKTestKernel-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTestKernel-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/TestKernel/CMakeFiles/ITKTestKernel-all.dir/build.make Modules/Core/TestKernel/CMakeFiles/ITKTestKernel-all.dir/build make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOVTK-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMap-all.dir/build.make Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMap-all.dir/depend make[3]: Nothing to be done for 'Modules/Core/TestKernel/CMakeFiles/ITKTestKernel-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKTestKernel-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageCompose/CMakeFiles/ITKImageCompose-all.dir/build.make Modules/Filtering/ImageCompose/CMakeFiles/ITKImageCompose-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/LabelMap /<>/BUILD /<>/BUILD/Modules/Filtering/LabelMap /<>/BUILD/Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMap-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelMap-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMap-all.dir/build.make Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMap-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/LabelMap/CMakeFiles/ITKLabelMap-all.dir/build'. make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageCompose /<>/BUILD /<>/BUILD/Modules/Filtering/ImageCompose /<>/BUILD/Modules/Filtering/ImageCompose/CMakeFiles/ITKImageCompose-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageCompose-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageCompose/CMakeFiles/ITKImageCompose-all.dir/build.make Modules/Filtering/ImageCompose/CMakeFiles/ITKImageCompose-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/ImageCompose/CMakeFiles/ITKImageCompose-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKLabelMap-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/build.make Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/depend make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKImageCompose-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjects-all.dir/build.make Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjects-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/SpatialObjects /<>/BUILD /<>/BUILD/Modules/Core/SpatialObjects /<>/BUILD/Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjects-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSpatialObjects-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjects-all.dir/build.make Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjects-all.dir/build make[3]: Nothing to be done for 'Modules/Core/SpatialObjects/CMakeFiles/ITKSpatialObjects-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKSpatialObjects-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageStatistics/CMakeFiles/ITKImageStatistics-all.dir/build.make Modules/Filtering/ImageStatistics/CMakeFiles/ITKImageStatistics-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageStatistics /<>/BUILD /<>/BUILD/Modules/Filtering/ImageStatistics /<>/BUILD/Modules/Filtering/ImageStatistics/CMakeFiles/ITKImageStatistics-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageStatistics-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageStatistics/CMakeFiles/ITKImageStatistics-all.dir/build.make Modules/Filtering/ImageStatistics/CMakeFiles/ITKImageStatistics-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/ImageStatistics/CMakeFiles/ITKImageStatistics-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKImageStatistics-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Path/CMakeFiles/ITKPath-all.dir/build.make Modules/Filtering/Path/CMakeFiles/ITKPath-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Path /<>/BUILD /<>/BUILD/Modules/Filtering/Path /<>/BUILD/Modules/Filtering/Path/CMakeFiles/ITKPath-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPath-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Path/CMakeFiles/ITKPath-all.dir/build.make Modules/Filtering/Path/CMakeFiles/ITKPath-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/Path/CMakeFiles/ITKPath-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKPath-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensity-all.dir/build.make Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensity-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageIntensity /<>/BUILD /<>/BUILD/Modules/Filtering/ImageIntensity /<>/BUILD/Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensity-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageIntensity-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensity-all.dir/build.make Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensity-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/ImageIntensity/CMakeFiles/ITKImageIntensity-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKImageIntensity-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Thresholding/CMakeFiles/ITKThresholding-all.dir/build.make Modules/Filtering/Thresholding/CMakeFiles/ITKThresholding-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Thresholding /<>/BUILD /<>/BUILD/Modules/Filtering/Thresholding /<>/BUILD/Modules/Filtering/Thresholding/CMakeFiles/ITKThresholding-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKThresholding-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Thresholding/CMakeFiles/ITKThresholding-all.dir/build.make Modules/Filtering/Thresholding/CMakeFiles/ITKThresholding-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/Thresholding/CMakeFiles/ITKThresholding-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKThresholding-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/ConnectedComponents/CMakeFiles/ITKConnectedComponents-all.dir/build.make Modules/Segmentation/ConnectedComponents/CMakeFiles/ITKConnectedComponents-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Mesh/test /<>/BUILD /<>/BUILD/Modules/Core/Mesh/test /<>/BUILD/Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMeshTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/build.make Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/ConnectedComponents /<>/BUILD /<>/BUILD/Modules/Segmentation/ConnectedComponents /<>/BUILD/Modules/Segmentation/ConnectedComponents/CMakeFiles/ITKConnectedComponents-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKConnectedComponents-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/ConnectedComponents/CMakeFiles/ITKConnectedComponents-all.dir/build.make Modules/Segmentation/ConnectedComponents/CMakeFiles/ITKConnectedComponents-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/ConnectedComponents/CMakeFiles/ITKConnectedComponents-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKConnectedComponents-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphology-all.dir/build.make Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphology-all.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/ITKMeshTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/MathematicalMorphology /<>/BUILD /<>/BUILD/Modules/Filtering/MathematicalMorphology /<>/BUILD/Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphology-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMathematicalMorphology-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphology-all.dir/build.make Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphology-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/MathematicalMorphology/CMakeFiles/ITKMathematicalMorphology-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKMathematicalMorphology-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphology-all.dir/build.make Modules/Filtering/BinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphology-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BinaryMathematicalMorphology /<>/BUILD /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology /<>/BUILD/Modules/Filtering/BinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphology-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBinaryMathematicalMorphology-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphology-all.dir/build.make Modules/Filtering/BinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphology-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/BinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphology-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKBinaryMathematicalMorphology-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageLabel/CMakeFiles/ITKImageLabel-all.dir/build.make Modules/Filtering/ImageLabel/CMakeFiles/ITKImageLabel-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageLabel /<>/BUILD /<>/BUILD/Modules/Filtering/ImageLabel /<>/BUILD/Modules/Filtering/ImageLabel/CMakeFiles/ITKImageLabel-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageLabel-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageLabel/CMakeFiles/ITKImageLabel-all.dir/build.make Modules/Filtering/ImageLabel/CMakeFiles/ITKImageLabel-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/ImageLabel/CMakeFiles/ITKImageLabel-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKImageLabel-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NarrowBand/CMakeFiles/ITKNarrowBand-all.dir/build.make Modules/Numerics/NarrowBand/CMakeFiles/ITKNarrowBand-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/NarrowBand /<>/BUILD /<>/BUILD/Modules/Numerics/NarrowBand /<>/BUILD/Modules/Numerics/NarrowBand/CMakeFiles/ITKNarrowBand-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNarrowBand-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/NarrowBand/CMakeFiles/ITKNarrowBand-all.dir/build.make Modules/Numerics/NarrowBand/CMakeFiles/ITKNarrowBand-all.dir/build make[3]: Nothing to be done for 'Modules/Numerics/NarrowBand/CMakeFiles/ITKNarrowBand-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKNarrowBand-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DistanceMap/CMakeFiles/ITKDistanceMap-all.dir/build.make Modules/Filtering/DistanceMap/CMakeFiles/ITKDistanceMap-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DistanceMap /<>/BUILD /<>/BUILD/Modules/Filtering/DistanceMap /<>/BUILD/Modules/Filtering/DistanceMap/CMakeFiles/ITKDistanceMap-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDistanceMap-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DistanceMap/CMakeFiles/ITKDistanceMap-all.dir/build.make Modules/Filtering/DistanceMap/CMakeFiles/ITKDistanceMap-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/DistanceMap/CMakeFiles/ITKDistanceMap-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKDistanceMap-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/QuadEdgeMesh/CMakeFiles/ITKQuadEdgeMesh-all.dir/build.make Modules/Core/QuadEdgeMesh/CMakeFiles/ITKQuadEdgeMesh-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/QuadEdgeMesh /<>/BUILD /<>/BUILD/Modules/Core/QuadEdgeMesh /<>/BUILD/Modules/Core/QuadEdgeMesh/CMakeFiles/ITKQuadEdgeMesh-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMesh-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/QuadEdgeMesh/CMakeFiles/ITKQuadEdgeMesh-all.dir/build.make Modules/Core/QuadEdgeMesh/CMakeFiles/ITKQuadEdgeMesh-all.dir/build make[3]: Nothing to be done for 'Modules/Core/QuadEdgeMesh/CMakeFiles/ITKQuadEdgeMesh-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKQuadEdgeMesh-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FastMarching/CMakeFiles/ITKFastMarching-all.dir/build.make Modules/Filtering/FastMarching/CMakeFiles/ITKFastMarching-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FastMarching /<>/BUILD /<>/BUILD/Modules/Filtering/FastMarching /<>/BUILD/Modules/Filtering/FastMarching/CMakeFiles/ITKFastMarching-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFastMarching-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FastMarching/CMakeFiles/ITKFastMarching-all.dir/build.make Modules/Filtering/FastMarching/CMakeFiles/ITKFastMarching-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/FastMarching/CMakeFiles/ITKFastMarching-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKFastMarching-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageCompare/CMakeFiles/ITKImageCompare-all.dir/build.make Modules/Filtering/ImageCompare/CMakeFiles/ITKImageCompare-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageCompare /<>/BUILD /<>/BUILD/Modules/Filtering/ImageCompare /<>/BUILD/Modules/Filtering/ImageCompare/CMakeFiles/ITKImageCompare-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageCompare-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageCompare/CMakeFiles/ITKImageCompare-all.dir/build.make Modules/Filtering/ImageCompare/CMakeFiles/ITKImageCompare-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/ImageCompare/CMakeFiles/ITKImageCompare-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKImageCompare-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Smoothing/CMakeFiles/ITKSmoothing-all.dir/build.make Modules/Filtering/Smoothing/CMakeFiles/ITKSmoothing-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Smoothing /<>/BUILD /<>/BUILD/Modules/Filtering/Smoothing /<>/BUILD/Modules/Filtering/Smoothing/CMakeFiles/ITKSmoothing-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSmoothing-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Smoothing/CMakeFiles/ITKSmoothing-all.dir/build.make Modules/Filtering/Smoothing/CMakeFiles/ITKSmoothing-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/Smoothing/CMakeFiles/ITKSmoothing-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKSmoothing-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageGradient/CMakeFiles/ITKImageGradient-all.dir/build.make Modules/Filtering/ImageGradient/CMakeFiles/ITKImageGradient-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageGradient /<>/BUILD /<>/BUILD/Modules/Filtering/ImageGradient /<>/BUILD/Modules/Filtering/ImageGradient/CMakeFiles/ITKImageGradient-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageGradient-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageGradient/CMakeFiles/ITKImageGradient-all.dir/build.make Modules/Filtering/ImageGradient/CMakeFiles/ITKImageGradient-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/ImageGradient/CMakeFiles/ITKImageGradient-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKImageGradient-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageSources/CMakeFiles/ITKImageSources-all.dir/build.make Modules/Filtering/ImageSources/CMakeFiles/ITKImageSources-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageSources /<>/BUILD /<>/BUILD/Modules/Filtering/ImageSources /<>/BUILD/Modules/Filtering/ImageSources/CMakeFiles/ITKImageSources-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageSources-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageSources/CMakeFiles/ITKImageSources-all.dir/build.make Modules/Filtering/ImageSources/CMakeFiles/ITKImageSources-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/ImageSources/CMakeFiles/ITKImageSources-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKImageSources-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFeature/CMakeFiles/ITKImageFeature-all.dir/build.make Modules/Filtering/ImageFeature/CMakeFiles/ITKImageFeature-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFeature /<>/BUILD /<>/BUILD/Modules/Filtering/ImageFeature /<>/BUILD/Modules/Filtering/ImageFeature/CMakeFiles/ITKImageFeature-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFeature-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/ImageFeature/CMakeFiles/ITKImageFeature-all.dir/build.make Modules/Filtering/ImageFeature/CMakeFiles/ITKImageFeature-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/ImageFeature/CMakeFiles/ITKImageFeature-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKImageFeature-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizers/CMakeFiles/ITKOptimizers-all.dir/build.make Modules/Numerics/Optimizers/CMakeFiles/ITKOptimizers-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizers /<>/BUILD /<>/BUILD/Modules/Numerics/Optimizers /<>/BUILD/Modules/Numerics/Optimizers/CMakeFiles/ITKOptimizers-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizers-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Optimizers/CMakeFiles/ITKOptimizers-all.dir/build.make Modules/Numerics/Optimizers/CMakeFiles/ITKOptimizers-all.dir/build make[3]: Nothing to be done for 'Modules/Numerics/Optimizers/CMakeFiles/ITKOptimizers-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKOptimizers-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/SignedDistanceFunction/CMakeFiles/ITKSignedDistanceFunction-all.dir/build.make Modules/Segmentation/SignedDistanceFunction/CMakeFiles/ITKSignedDistanceFunction-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/SignedDistanceFunction /<>/BUILD /<>/BUILD/Modules/Segmentation/SignedDistanceFunction /<>/BUILD/Modules/Segmentation/SignedDistanceFunction/CMakeFiles/ITKSignedDistanceFunction-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSignedDistanceFunction-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/SignedDistanceFunction/CMakeFiles/ITKSignedDistanceFunction-all.dir/build.make Modules/Segmentation/SignedDistanceFunction/CMakeFiles/ITKSignedDistanceFunction-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/SignedDistanceFunction/CMakeFiles/ITKSignedDistanceFunction-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKSignedDistanceFunction-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSets-all.dir/build.make Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSets-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LevelSets /<>/BUILD /<>/BUILD/Modules/Segmentation/LevelSets /<>/BUILD/Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSets-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLevelSets-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSets-all.dir/build.make Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSets-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/LevelSets/CMakeFiles/ITKLevelSets-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKLevelSets-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/AntiAlias/CMakeFiles/ITKAntiAlias-all.dir/build.make Modules/Filtering/AntiAlias/CMakeFiles/ITKAntiAlias-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/AntiAlias /<>/BUILD /<>/BUILD/Modules/Filtering/AntiAlias /<>/BUILD/Modules/Filtering/AntiAlias/CMakeFiles/ITKAntiAlias-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAntiAlias-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/AntiAlias/CMakeFiles/ITKAntiAlias-all.dir/build.make Modules/Filtering/AntiAlias/CMakeFiles/ITKAntiAlias-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/AntiAlias/CMakeFiles/ITKAntiAlias-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKAntiAlias-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Polynomials/CMakeFiles/ITKPolynomials-all.dir/build.make Modules/Numerics/Polynomials/CMakeFiles/ITKPolynomials-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Polynomials /<>/BUILD /<>/BUILD/Modules/Numerics/Polynomials /<>/BUILD/Modules/Numerics/Polynomials/CMakeFiles/ITKPolynomials-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPolynomials-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Polynomials/CMakeFiles/ITKPolynomials-all.dir/build.make Modules/Numerics/Polynomials/CMakeFiles/ITKPolynomials-all.dir/build make[3]: Nothing to be done for 'Modules/Numerics/Polynomials/CMakeFiles/ITKPolynomials-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKPolynomials-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BiasCorrection/CMakeFiles/ITKBiasCorrection-all.dir/build.make Modules/Filtering/BiasCorrection/CMakeFiles/ITKBiasCorrection-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BiasCorrection /<>/BUILD /<>/BUILD/Modules/Filtering/BiasCorrection /<>/BUILD/Modules/Filtering/BiasCorrection/CMakeFiles/ITKBiasCorrection-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBiasCorrection-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/BiasCorrection/CMakeFiles/ITKBiasCorrection-all.dir/build.make Modules/Filtering/BiasCorrection/CMakeFiles/ITKBiasCorrection-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/BiasCorrection/CMakeFiles/ITKBiasCorrection-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKBiasCorrection-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/BioCell/CMakeFiles/ITKBioCell-all.dir/build.make Modules/Segmentation/BioCell/CMakeFiles/ITKBioCell-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/BioCell /<>/BUILD /<>/BUILD/Modules/Segmentation/BioCell /<>/BUILD/Modules/Segmentation/BioCell/CMakeFiles/ITKBioCell-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBioCell-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/BioCell/CMakeFiles/ITKBioCell-all.dir/build.make Modules/Segmentation/BioCell/CMakeFiles/ITKBioCell-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/BioCell/CMakeFiles/ITKBioCell-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKBioCell-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Classifiers/CMakeFiles/ITKClassifiers-all.dir/build.make Modules/Segmentation/Classifiers/CMakeFiles/ITKClassifiers-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Classifiers /<>/BUILD /<>/BUILD/Modules/Segmentation/Classifiers /<>/BUILD/Modules/Segmentation/Classifiers/CMakeFiles/ITKClassifiers-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKClassifiers-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/Classifiers/CMakeFiles/ITKClassifiers-all.dir/build.make Modules/Segmentation/Classifiers/CMakeFiles/ITKClassifiers-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/Classifiers/CMakeFiles/ITKClassifiers-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKClassifiers-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Colormap/CMakeFiles/ITKColormap-all.dir/build.make Modules/Filtering/Colormap/CMakeFiles/ITKColormap-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3BSplineWarping2.dir/BSplineWarping2.cxx.o -c /<>/Examples/RegistrationITKv3/BSplineWarping2.cxx In file included from /<>/Examples/RegistrationITKv3/BSplineWarping2.cxx:28: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/BSplineWarping2.cxx:56:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/BSplineWarping2.cxx:61:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3BSplineWarping2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Colormap /<>/BUILD /<>/BUILD/Modules/Filtering/Colormap /<>/BUILD/Modules/Filtering/Colormap/CMakeFiles/ITKColormap-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKColormap-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Colormap/CMakeFiles/ITKColormap-all.dir/build.make Modules/Filtering/Colormap/CMakeFiles/ITKColormap-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/Colormap/CMakeFiles/ITKColormap-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKColormap-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FFT/CMakeFiles/ITKFFT-all.dir/build.make Modules/Filtering/FFT/CMakeFiles/ITKFFT-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FFT /<>/BUILD /<>/BUILD/Modules/Filtering/FFT /<>/BUILD/Modules/Filtering/FFT/CMakeFiles/ITKFFT-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFFT-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/FFT/CMakeFiles/ITKFFT-all.dir/build.make Modules/Filtering/FFT/CMakeFiles/ITKFFT-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/FFT/CMakeFiles/ITKFFT-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKFFT-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Convolution/CMakeFiles/ITKConvolution-all.dir/build.make Modules/Filtering/Convolution/CMakeFiles/ITKConvolution-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Convolution /<>/BUILD /<>/BUILD/Modules/Filtering/Convolution /<>/BUILD/Modules/Filtering/Convolution/CMakeFiles/ITKConvolution-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKConvolution-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Convolution/CMakeFiles/ITKConvolution-all.dir/build.make Modules/Filtering/Convolution/CMakeFiles/ITKConvolution-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/Convolution/CMakeFiles/ITKConvolution-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKConvolution-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Deconvolution/CMakeFiles/ITKDeconvolution-all.dir/build.make Modules/Filtering/Deconvolution/CMakeFiles/ITKDeconvolution-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Deconvolution /<>/BUILD /<>/BUILD/Modules/Filtering/Deconvolution /<>/BUILD/Modules/Filtering/Deconvolution/CMakeFiles/ITKDeconvolution-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeconvolution-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Deconvolution/CMakeFiles/ITKDeconvolution-all.dir/build.make Modules/Filtering/Deconvolution/CMakeFiles/ITKDeconvolution-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/Deconvolution/CMakeFiles/ITKDeconvolution-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKDeconvolution-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/DeformableMesh/CMakeFiles/ITKDeformableMesh-all.dir/build.make Modules/Segmentation/DeformableMesh/CMakeFiles/ITKDeformableMesh-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/DeformableMesh /<>/BUILD /<>/BUILD/Modules/Segmentation/DeformableMesh /<>/BUILD/Modules/Segmentation/DeformableMesh/CMakeFiles/ITKDeformableMesh-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeformableMesh-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Segmentation/DeformableMesh/CMakeFiles/ITKDeformableMesh-all.dir/build.make Modules/Segmentation/DeformableMesh/CMakeFiles/ITKDeformableMesh-all.dir/build make[3]: Nothing to be done for 'Modules/Segmentation/DeformableMesh/CMakeFiles/ITKDeformableMesh-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKDeformableMesh-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Denoising/CMakeFiles/ITKDenoising-all.dir/build.make Modules/Filtering/Denoising/CMakeFiles/ITKDenoising-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3BSplineWarping2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3BSplineWarping2.dir/BSplineWarping2.cxx.o -o ../../bin/ITKv3BSplineWarping2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Denoising /<>/BUILD /<>/BUILD/Modules/Filtering/Denoising /<>/BUILD/Modules/Filtering/Denoising/CMakeFiles/ITKDenoising-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDenoising-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/Denoising/CMakeFiles/ITKDenoising-all.dir/build.make Modules/Filtering/Denoising/CMakeFiles/ITKDenoising-all.dir/build make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3BSplineWarping2 make[2]: Leaving directory '/<>/BUILD' make[3]: Nothing to be done for 'Modules/Filtering/Denoising/CMakeFiles/ITKDenoising-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKDenoising-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DisplacementField/CMakeFiles/ITKDisplacementField-all.dir/build.make Modules/Filtering/DisplacementField/CMakeFiles/ITKDisplacementField-all.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DisplacementField /<>/BUILD /<>/BUILD/Modules/Filtering/DisplacementField /<>/BUILD/Modules/Filtering/DisplacementField/CMakeFiles/ITKDisplacementField-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDisplacementField-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DisplacementField/CMakeFiles/ITKDisplacementField-all.dir/build.make Modules/Filtering/DisplacementField/CMakeFiles/ITKDisplacementField-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/DisplacementField/CMakeFiles/ITKDisplacementField-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKDisplacementField-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/V3Compatibility/CMakeFiles/ITKV3Compatibility-all.dir/build.make Modules/Compatibility/V3Compatibility/CMakeFiles/ITKV3Compatibility-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/V3Compatibility /<>/BUILD /<>/BUILD/Modules/Compatibility/V3Compatibility /<>/BUILD/Modules/Compatibility/V3Compatibility/CMakeFiles/ITKV3Compatibility-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKV3Compatibility-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/V3Compatibility/CMakeFiles/ITKV3Compatibility-all.dir/build.make Modules/Compatibility/V3Compatibility/CMakeFiles/ITKV3Compatibility-all.dir/build make[3]: Nothing to be done for 'Modules/Compatibility/V3Compatibility/CMakeFiles/ITKV3Compatibility-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKV3Compatibility-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/CMakeFiles/ITKDeprecatedHeaderTest1.dir/build.make Modules/Compatibility/Deprecated/CMakeFiles/ITKDeprecatedHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating test/ITKDeprecatedHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKDeprecated /<>/Modules/Compatibility/Deprecated /<>/BUILD/Modules/Compatibility/Deprecated 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/Deprecated /<>/BUILD /<>/BUILD/Modules/Compatibility/Deprecated /<>/BUILD/Modules/Compatibility/Deprecated/CMakeFiles/ITKDeprecatedHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeprecatedHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/CMakeFiles/ITKDeprecatedHeaderTest1.dir/build.make Modules/Compatibility/Deprecated/CMakeFiles/ITKDeprecatedHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/CMakeFiles/ITKDeprecatedHeaderTest1.dir/test/ITKDeprecatedHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/IO/GDCM/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Core/Mesh/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedHeaderTest1.dir/test/ITKDeprecatedHeaderTest1.cxx.o -c /<>/BUILD/Modules/Compatibility/Deprecated/test/ITKDeprecatedHeaderTest1.cxx In file included from /<>/BUILD/Modules/Compatibility/Deprecated/test/ITKDeprecatedHeaderTest1.cxx:23: In file included from /<>/Modules/Compatibility/Deprecated/include/itkDefaultImageTraits.h:22: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/BUILD/Modules/Compatibility/Deprecated/test/ITKDeprecatedHeaderTest1.cxx:50: In file included from /<>/Modules/Compatibility/Deprecated/include/itkQuaternionOrientationAdapter.h:32: In file included from /<>/Modules/Core/Transform/include/itkQuaternionRigidTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkQuaternionRigidTransform.h:49:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Compatibility/Deprecated/include/itkQuaternionOrientationAdapter.h:45:9: note: in instantiation of template class 'itk::QuaternionRigidTransform' requested here typedef TransformType::Pointer TransformPointerType; ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../bin/ITKDeprecatedHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDeprecatedHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDeprecatedHeaderTest1.dir/test/ITKDeprecatedHeaderTest1.cxx.o -o ../../../bin/ITKDeprecatedHeaderTest1 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKDeprecatedHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/ITKAnalyzeIO-TestHelper.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/ITKAnalyzeIO-TestHelper.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/Deprecated/test /<>/BUILD /<>/BUILD/Modules/Compatibility/Deprecated/test /<>/BUILD/Modules/Compatibility/Deprecated/test/CMakeFiles/ITKAnalyzeIO-TestHelper.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAnalyzeIO-TestHelper make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/ITKAnalyzeIO-TestHelper.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/ITKAnalyzeIO-TestHelper.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKAnalyzeIO-TestHelper.dir/itkAnalyzeImageIOTestHelper.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -DITKAnalyzeIO_TestHelper_EXPORTS -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -o CMakeFiles/ITKAnalyzeIO-TestHelper.dir/itkAnalyzeImageIOTestHelper.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOTestHelper.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOTestHelper.cxx:19: In file included from /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOTest.h:26: In file included from /<>/Modules/Compatibility/Deprecated/include/itkAnalyzeImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX shared library ../../../../lib/libITKAnalyzeIO-TestHelper.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKAnalyzeIO-TestHelper.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libITKAnalyzeIO-TestHelper.so -o ../../../../lib/libITKAnalyzeIO-TestHelper.so CMakeFiles/ITKAnalyzeIO-TestHelper.dir/itkAnalyzeImageIOTestHelper.cxx.o ../../../../lib/libITKDeprecated-4.12.so.1 -lz ../../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKAnalyzeIO-TestHelper make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/Deprecated/test /<>/BUILD /<>/BUILD/Modules/Compatibility/Deprecated/test /<>/BUILD/Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeprecatedTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/ITKDeprecatedTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration2.dir/DeformableRegistration2.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration2.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration2.cxx:27: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration2.cxx:71:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration2.cxx:76:10: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration1.dir/DeformableRegistration1.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration1.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration1.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration2.dir/DeformableRegistration2.cxx.o -o ../../bin/ITKv3DeformableRegistration2 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/BioRad/CMakeFiles/ITKIOBioRad-all.dir/build.make Modules/IO/BioRad/CMakeFiles/ITKIOBioRad-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/BioRad /<>/BUILD /<>/BUILD/Modules/IO/BioRad /<>/BUILD/Modules/IO/BioRad/CMakeFiles/ITKIOBioRad-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOBioRad-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/BioRad/CMakeFiles/ITKIOBioRad-all.dir/build.make Modules/IO/BioRad/CMakeFiles/ITKIOBioRad-all.dir/build make[3]: Nothing to be done for 'Modules/IO/BioRad/CMakeFiles/ITKIOBioRad-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOBioRad-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/LSM/CMakeFiles/ITKIOLSM-all.dir/build.make Modules/IO/LSM/CMakeFiles/ITKIOLSM-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/LSM /<>/BUILD /<>/BUILD/Modules/IO/LSM /<>/BUILD/Modules/IO/LSM/CMakeFiles/ITKIOLSM-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOLSM-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/LSM/CMakeFiles/ITKIOLSM-all.dir/build.make Modules/IO/LSM/CMakeFiles/ITKIOLSM-all.dir/build make[3]: Nothing to be done for 'Modules/IO/LSM/CMakeFiles/ITKIOLSM-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOLSM-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Stimulate/CMakeFiles/ITKIOStimulate-all.dir/build.make Modules/IO/Stimulate/CMakeFiles/ITKIOStimulate-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Stimulate /<>/BUILD /<>/BUILD/Modules/IO/Stimulate /<>/BUILD/Modules/IO/Stimulate/CMakeFiles/ITKIOStimulate-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOStimulate-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Stimulate/CMakeFiles/ITKIOStimulate-all.dir/build.make Modules/IO/Stimulate/CMakeFiles/ITKIOStimulate-all.dir/build make[3]: Nothing to be done for 'Modules/IO/Stimulate/CMakeFiles/ITKIOStimulate-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOStimulate-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Common/CMakeFiles/ITKRegistrationCommon-all.dir/build.make Modules/Registration/Common/CMakeFiles/ITKRegistrationCommon-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Common /<>/BUILD /<>/BUILD/Modules/Registration/Common /<>/BUILD/Modules/Registration/Common/CMakeFiles/ITKRegistrationCommon-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationCommon-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/Common/CMakeFiles/ITKRegistrationCommon-all.dir/build.make Modules/Registration/Common/CMakeFiles/ITKRegistrationCommon-all.dir/build make[3]: Nothing to be done for 'Modules/Registration/Common/CMakeFiles/ITKRegistrationCommon-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKRegistrationCommon-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/ConvertAnalyzeFile.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/ConvertAnalyzeFile.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration1.dir/DeformableRegistration1.cxx.o -o ../../bin/ITKv3DeformableRegistration1 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/DeformableModel1.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/DeformableModel1.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/Deprecated/test /<>/BUILD /<>/BUILD/Modules/Compatibility/Deprecated/test /<>/BUILD/Modules/Compatibility/Deprecated/test/CMakeFiles/ConvertAnalyzeFile.dir/DependInfo.cmake --color= Scanning dependencies of target ConvertAnalyzeFile make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/ConvertAnalyzeFile.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/ConvertAnalyzeFile.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ConvertAnalyzeFile.dir/ConvertAnalyzeFile.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/Deprecated/test /<>/BUILD /<>/BUILD/Modules/Compatibility/Deprecated/test /<>/BUILD/Modules/Compatibility/Deprecated/test/CMakeFiles/DeformableModel1.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableModel1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/DeformableModel1.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/DeformableModel1.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeformableModel1.dir/DeformableModel1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration11.dir/DeformableRegistration11.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration11.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration11.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration11 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration11.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration11.dir/DeformableRegistration11.cxx.o -o ../../bin/ITKv3DeformableRegistration11 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration11 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/DeformableModel2.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/DeformableModel2.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/Deprecated/test /<>/BUILD /<>/BUILD/Modules/Compatibility/Deprecated/test /<>/BUILD/Modules/Compatibility/Deprecated/test/CMakeFiles/DeformableModel2.dir/DependInfo.cmake --color= Scanning dependencies of target DeformableModel2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/DeformableModel2.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/DeformableModel2.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeformableModel2.dir/DeformableModel2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/BUILD/Examples/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKv3DeformableRegistration15.dir/DeformableRegistration15.cxx.o -c /<>/Examples/RegistrationITKv3/DeformableRegistration15.cxx In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration15.cxx:33: In file included from /<>/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration15.cxx:90:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(itk::Object *caller, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:57:16: note: overridden virtual function is here virtual void Execute(Object *caller, const EventObject & event) = 0; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration15.cxx:95:8: warning: 'Execute' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void Execute(const itk::Object * object, const itk::EventObject & event) ^ /<>/Modules/Core/Common/include/itkCommand.h:62:16: note: overridden virtual function is here virtual void Execute(const Object *caller, const EventObject & event) = 0; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration15.cxx:52: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: In file included from /<>/Modules/Core/Transform/include/itkVersorTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkVersorTransform.h:47:52: note: in instantiation of template class 'itk::Rigid3DTransform' requested here class ITK_TEMPLATE_EXPORT VersorTransform : public Rigid3DTransform ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/Common/include/itkCenteredTransformInitializer.h:80:20: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here typedef typename TransformType::Pointer TransformPointer; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration15.cxx:255:3: note: in instantiation of template class 'itk::CenteredTransformInitializer, itk::Image, itk::Image >' requested here TransformInitializerType::Pointer initializer = TransformInitializerType::New(); ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Examples/RegistrationITKv3/DeformableRegistration15.cxx:52: In file included from /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:22: /<>/Modules/Core/Transform/include/itkVersorTransform.h:141:32: warning: 'SetRotationMatrix' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] itkLegacyMacro( virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ /<>/Modules/Core/Transform/include/itkVersorRigid3DTransform.h:47:10: note: in instantiation of template class 'itk::VersorTransform' requested here public VersorTransform ^ /<>/Modules/Registration/Common/include/itkCenteredTransformInitializer.h:80:20: note: in instantiation of template class 'itk::VersorRigid3DTransform' requested here typedef typename TransformType::Pointer TransformPointer; ^ /<>/Examples/RegistrationITKv3/DeformableRegistration15.cxx:255:3: note: in instantiation of template class 'itk::CenteredTransformInitializer, itk::Image, itk::Image >' requested here TransformInitializerType::Pointer initializer = TransformInitializerType::New(); ^ /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:188:31: note: overridden virtual function is here itkLegacyMacro(virtual void SetRotationMatrix(const MatrixType & matrix) ); ^ 5 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../bin/ITKv3DeformableRegistration15 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Examples/RegistrationITKv3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKv3DeformableRegistration15.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKv3DeformableRegistration15.dir/DeformableRegistration15.cxx.o -o ../../bin/ITKv3DeformableRegistration15 -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../lib/libITKDeprecated-4.12.so.1 ../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../lib/libITKIOCSV-4.12.so.1 ../../lib/libITKIOHDF5-4.12.so.1 ../../lib/libITKIOMRC-4.12.so.1 ../../lib/libITKOptimizersv4-4.12.so.1 ../../lib/libITKReview-4.12.so.1 ../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../lib/libITKDICOMParser-4.12.so.1 ../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../lib/libITKIOBMP-4.12.so.1 ../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../lib/libITKIOGIPL-4.12.so.1 ../../lib/libITKIOJPEG-4.12.so.1 ../../lib/libITKIOMeta-4.12.so.1 ../../lib/libITKIONIFTI-4.12.so.1 ../../lib/libITKIONRRD-4.12.so.1 ../../lib/libITKNrrdIO-4.12.so.1 ../../lib/libITKIOPNG-4.12.so.1 ../../lib/libITKIOTIFF-4.12.so.1 ../../lib/libITKIOVTK-4.12.so.1 ../../lib/libITKLabelMap-4.12.so.1 ../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../lib/libITKPolynomials-4.12.so.1 ../../lib/libITKBiasCorrection-4.12.so.1 ../../lib/libITKBioCell-4.12.so.1 ../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../lib/libITKIOBioRad-4.12.so.1 ../../lib/libITKIOStimulate-4.12.so.1 ../../lib/libITKIOSpatialObjects-4.12.so.1 ../../lib/libITKIOXML-4.12.so.1 ../../lib/libITKFEM-4.12.so.1 ../../lib/libITKMetaIO-4.12.so.1 -lz ../../lib/libITKOptimizers-4.12.so.1 ../../lib/libITKIOGE-4.12.so.1 ../../lib/libITKIOSiemens-4.12.so.1 ../../lib/libITKIOIPL-4.12.so.1 ../../lib/libITKIOTransformHDF5-4.12.so.1 ../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../lib/libITKIOTransformMatlab-4.12.so.1 ../../lib/libITKIOTransformBase-4.12.so.1 ../../lib/libITKTransformFactory-4.12.so.1 ../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../lib/libITKVTK-4.12.so.1 ../../lib/libITKWatersheds-4.12.so.1 ../../lib/libITKStatistics-4.12.so.1 ../../lib/libitkNetlibSlatec-4.12.so.1 ../../lib/libITKSpatialObjects-4.12.so.1 ../../lib/libITKMesh-4.12.so.1 ../../lib/libITKTransform-4.12.so.1 ../../lib/libITKPath-4.12.so.1 ../../lib/libitkopenjpeg-4.12.so.1 ../../lib/libITKIOImageBase-4.12.so.1 ../../lib/libITKVideoCore-4.12.so.1 ../../lib/libITKCommon-4.12.so.1 ../../lib/libitksys-4.12.so.1 ../../lib/libITKVNLInstantiation-4.12.so.1 ../../lib/libitkvnl_algo-4.12.so.1 ../../lib/libitkvnl-4.12.so.1 ../../lib/libitkv3p_netlib-4.12.so.1 ../../lib/libitknetlib-4.12.so.1 ../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKv3DeformableRegistration15 make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itkSymmetricEigenSystemTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itkSymmetricEigenSystemTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkSymmetricEigenSystemTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkSymmetricEigenSystemTest.cxx:21: In file included from /<>/Modules/Compatibility/Deprecated/include/itkSymmetricEigenSystem.h:26: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itk2DDeformableTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableModel2.dir/DeformableModel2.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/DeformableModel2.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/DeformableModel2.cxx:32: In file included from /<>/Modules/Compatibility/Deprecated/include/itkDeformableMesh3DFilter.h:25: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/DeformableModel2.cxx:32: /<>/Modules/Compatibility/Deprecated/include/itkDeformableMesh3DFilter.h:164:16: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateData(); ^ /<>/Modules/Compatibility/Deprecated/test/DeformableModel2.cxx:108:3: note: in instantiation of template class 'itk::DeformableMesh3DFilter >, itk::Mesh > >' requested here DeformableFilterType::Pointer deformableModelFilter = ^ /<>/Modules/Core/Common/include/itkProcessObject.h:744:16: note: overridden virtual function is here virtual void GenerateData() {} ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../../bin/DeformableModel2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableModel2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableModel2.dir/DeformableModel2.cxx.o -o ../../../../bin/DeformableModel2 ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKAnalyzeIO-TestHelper.so ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKDeprecated-4.12.so.1 ../../../../lib/libITKDICOMParser-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm ../../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target DeformableModel2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DiffusionTensorImage/CMakeFiles/ITKDiffusionTensorImage-all.dir/build.make Modules/Filtering/DiffusionTensorImage/CMakeFiles/ITKDiffusionTensorImage-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DiffusionTensorImage /<>/BUILD /<>/BUILD/Modules/Filtering/DiffusionTensorImage /<>/BUILD/Modules/Filtering/DiffusionTensorImage/CMakeFiles/ITKDiffusionTensorImage-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDiffusionTensorImage-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/DiffusionTensorImage/CMakeFiles/ITKDiffusionTensorImage-all.dir/build.make Modules/Filtering/DiffusionTensorImage/CMakeFiles/ITKDiffusionTensorImage-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/DiffusionTensorImage/CMakeFiles/ITKDiffusionTensorImage-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKDiffusionTensorImage-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Eigen/CMakeFiles/ITKEigen-all.dir/build.make Modules/Numerics/Eigen/CMakeFiles/ITKEigen-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Eigen /<>/BUILD /<>/BUILD/Modules/Numerics/Eigen /<>/BUILD/Modules/Numerics/Eigen/CMakeFiles/ITKEigen-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKEigen-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/Eigen/CMakeFiles/ITKEigen-all.dir/build.make Modules/Numerics/Eigen/CMakeFiles/ITKEigen-all.dir/build make[3]: Nothing to be done for 'Modules/Numerics/Eigen/CMakeFiles/ITKEigen-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKEigen-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/XML/CMakeFiles/ITKIOXML-all.dir/build.make Modules/IO/XML/CMakeFiles/ITKIOXML-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/XML /<>/BUILD /<>/BUILD/Modules/IO/XML /<>/BUILD/Modules/IO/XML/CMakeFiles/ITKIOXML-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOXML-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/XML/CMakeFiles/ITKIOXML-all.dir/build.make Modules/IO/XML/CMakeFiles/ITKIOXML-all.dir/build make[3]: Nothing to be done for 'Modules/IO/XML/CMakeFiles/ITKIOXML-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOXML-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/SpatialObjects/CMakeFiles/ITKIOSpatialObjects-all.dir/build.make Modules/IO/SpatialObjects/CMakeFiles/ITKIOSpatialObjects-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/SpatialObjects /<>/BUILD /<>/BUILD/Modules/IO/SpatialObjects /<>/BUILD/Modules/IO/SpatialObjects/CMakeFiles/ITKIOSpatialObjects-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSpatialObjects-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/SpatialObjects/CMakeFiles/ITKIOSpatialObjects-all.dir/build.make Modules/IO/SpatialObjects/CMakeFiles/ITKIOSpatialObjects-all.dir/build make[3]: Nothing to be done for 'Modules/IO/SpatialObjects/CMakeFiles/ITKIOSpatialObjects-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOSpatialObjects-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/build.make Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.cxx:19: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/FEM/test /<>/BUILD /<>/BUILD/Modules/Numerics/FEM/test /<>/BUILD/Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFEMTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/build.make Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/ITKFEMTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeformableModel1.dir/DeformableModel1.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/DeformableModel1.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/DeformableModel1.cxx:89: In file included from /<>/Modules/Core/Mesh/include/itkBinaryMask3DMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/DeformableModel1.cxx:102: /<>/Modules/Compatibility/Deprecated/include/itkDeformableMesh3DFilter.h:164:16: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateData(); ^ /<>/Modules/Compatibility/Deprecated/test/DeformableModel1.cxx:404:3: note: in instantiation of template class 'itk::DeformableMesh3DFilter >, itk::Mesh > >' requested here DeformableFilterType::Pointer deformableModelFilter = ^ /<>/Modules/Core/Common/include/itkProcessObject.h:744:16: note: overridden virtual function is here virtual void GenerateData() {} ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../../bin/DeformableModel1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeformableModel1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeformableModel1.dir/DeformableModel1.cxx.o -o ../../../../bin/DeformableModel1 ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKAnalyzeIO-TestHelper.so ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKDeprecated-4.12.so.1 ../../../../lib/libITKDICOMParser-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm ../../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target DeformableModel1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest1.dir/build.make Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating test/ITKFEMHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKFEM /<>/Modules/Numerics/FEM /<>/BUILD/Modules/Numerics/FEM 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/FEM /<>/BUILD /<>/BUILD/Modules/Numerics/FEM /<>/BUILD/Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFEMHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest1.dir/build.make Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest1.dir/test/ITKFEMHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/ITKIONIFTITestDriver.cxx.o -c /<>/BUILD/Modules/IO/NIFTI/test/ITKIONIFTITestDriver.cxx In file included from /<>/BUILD/Modules/IO/NIFTI/test/ITKIONIFTITestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMHeaderTest1.dir/test/ITKFEMHeaderTest1.cxx.o -c /<>/BUILD/Modules/Numerics/FEM/test/ITKFEMHeaderTest1.cxx In file included from /<>/BUILD/Modules/Numerics/FEM/test/ITKFEMHeaderTest1.cxx:34: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSpatialObjectWriter.h:21: In file included from /<>/Modules/IO/SpatialObjects/include/itkSpatialObjectWriter.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaSceneConverter.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSceneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../bin/ITKFEMHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFEMHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKFEMHeaderTest1.dir/test/ITKFEMHeaderTest1.cxx.o -o ../../../bin/ITKFEMHeaderTest1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm ../../../lib/libITKMetaIO-4.12.so.1 -lz make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKFEMHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest3.dir/build.make Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest3.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating test/ITKFEMHeaderTest3.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKFEM /<>/Modules/Numerics/FEM /<>/BUILD/Modules/Numerics/FEM 35 3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/FEM /<>/BUILD /<>/BUILD/Modules/Numerics/FEM /<>/BUILD/Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest3.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFEMHeaderTest3 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest3.dir/build.make Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest3.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest3.dir/test/ITKFEMHeaderTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest2.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest2.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest2.cxx:19: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMHeaderTest3.dir/test/ITKFEMHeaderTest3.cxx.o -c /<>/BUILD/Modules/Numerics/FEM/test/ITKFEMHeaderTest3.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../bin/ITKFEMHeaderTest3 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/ITKMeshTestDriver.cxx.o -c /<>/BUILD/Modules/Core/Mesh/test/ITKMeshTestDriver.cxx In file included from /<>/BUILD/Modules/Core/Mesh/test/ITKMeshTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkAutomaticTopologyMeshSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFEMHeaderTest3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKFEMHeaderTest3.dir/test/ITKFEMHeaderTest3.cxx.o -o ../../../bin/ITKFEMHeaderTest3 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm ../../../lib/libITKMetaIO-4.12.so.1 -lz make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKFEMHeaderTest3 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest2.dir/build.make Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating test/ITKFEMHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKFEM /<>/Modules/Numerics/FEM /<>/BUILD/Modules/Numerics/FEM 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/FEM /<>/BUILD /<>/BUILD/Modules/Numerics/FEM /<>/BUILD/Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFEMHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest2.dir/build.make Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Numerics/FEM/CMakeFiles/ITKFEMHeaderTest2.dir/test/ITKFEMHeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itk2DDeformableTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itk2DDeformableTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itk2DDeformableTest.cxx:21: In file included from /<>/Modules/Filtering/ImageGradient/include/itkGradientRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/Smoothing/include/itkRecursiveGaussianImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkRecursiveSeparableImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itk2DDeformableTest.cxx:25: /<>/Modules/Compatibility/Deprecated/include/itkBalloonForceFilter.h:192:16: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateData(); ^ /<>/Modules/Compatibility/Deprecated/test/itk2DDeformableTest.cxx:200:3: note: in instantiation of template class 'itk::BalloonForceFilter >, itk::Mesh > >' requested here DFilter::Pointer m_dfilter = DFilter::New(); ^ /<>/Modules/Core/Common/include/itkProcessObject.h:744:16: note: overridden virtual function is here virtual void GenerateData() {} ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itkDeformableTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMHeaderTest2.dir/test/ITKFEMHeaderTest2.cxx.o -c /<>/BUILD/Modules/Numerics/FEM/test/ITKFEMHeaderTest2.cxx In file included from /<>/BUILD/Modules/Numerics/FEM/test/ITKFEMHeaderTest2.cxx:35: In file included from /<>/Modules/Numerics/FEM/include/itkFEMObjectSpatialObject.hxx:22: In file included from /<>/Modules/Numerics/FEM/include/itkFEMObjectSpatialObject.h:24: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../bin/ITKFEMHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFEMHeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKFEMHeaderTest2.dir/test/ITKFEMHeaderTest2.cxx.o -o ../../../bin/ITKFEMHeaderTest2 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm ../../../lib/libITKMetaIO-4.12.so.1 -lz make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKFEMHeaderTest2 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/PDEDeformable/CMakeFiles/ITKPDEDeformableRegistration-all.dir/build.make Modules/Registration/PDEDeformable/CMakeFiles/ITKPDEDeformableRegistration-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/PDEDeformable /<>/BUILD /<>/BUILD/Modules/Registration/PDEDeformable /<>/BUILD/Modules/Registration/PDEDeformable/CMakeFiles/ITKPDEDeformableRegistration-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPDEDeformableRegistration-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/PDEDeformable/CMakeFiles/ITKPDEDeformableRegistration-all.dir/build.make Modules/Registration/PDEDeformable/CMakeFiles/ITKPDEDeformableRegistration-all.dir/build make[3]: Nothing to be done for 'Modules/Registration/PDEDeformable/CMakeFiles/ITKPDEDeformableRegistration-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKPDEDeformableRegistration-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/FEM/test/CMakeFiles/ITKFEMRegistrationTestDriver.dir/build.make Modules/Registration/FEM/test/CMakeFiles/ITKFEMRegistrationTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/FEM/test /<>/BUILD /<>/BUILD/Modules/Registration/FEM/test /<>/BUILD/Modules/Registration/FEM/test/CMakeFiles/ITKFEMRegistrationTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFEMRegistrationTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/FEM/test/CMakeFiles/ITKFEMRegistrationTestDriver.dir/build.make Modules/Registration/FEM/test/CMakeFiles/ITKFEMRegistrationTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Registration/FEM/test/CMakeFiles/ITKFEMRegistrationTestDriver.dir/ITKFEMRegistrationTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/ITKDeprecatedTestDriver.cxx.o -c /<>/BUILD/Modules/Compatibility/Deprecated/test/ITKDeprecatedTestDriver.cxx In file included from /<>/BUILD/Modules/Compatibility/Deprecated/test/ITKDeprecatedTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeBuiltInIOFactories.h:20: In file included from /<>/Modules/IO/BioRad/include/itkBioRadImageIOFactory.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itkNonThreadedShrinkImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkAutomaticTopologyMeshSourceTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkAutomaticTopologyMeshSourceTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkAutomaticTopologyMeshSourceTest.cxx:22: In file included from /<>/Modules/Core/Mesh/include/itkAutomaticTopologyMeshSource.h:22: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkImageToParametricSpaceFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest4.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest4.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest4.cxx:20: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest5.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itkNonThreadedShrinkImageTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkNonThreadedShrinkImageTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkNonThreadedShrinkImageTest.cxx:20: In file included from /<>/Modules/Core/Common/include/itkImageRegionIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIterator.h:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkNonThreadedShrinkImageTest.cxx:21: /<>/Modules/Compatibility/Deprecated/include/itkNonThreadedShrinkImageFilter.h:65:16: warning: 'SetNumberOfThreads' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void SetNumberOfThreads(ThreadIdType) ^ /<>/Modules/Compatibility/Deprecated/test/itkNonThreadedShrinkImageTest.cxx:63:8: note: in instantiation of template class 'itk::NonThreadedShrinkImageFilter, itk::Image >' requested here itk::NonThreadedShrinkImageFilter< ShortImage, ShortImage >::Pointer shrink; ^ /<>/Modules/Core/Common/include/itkProcessObject.h:438:3: note: overridden virtual function is here itkSetClampMacro(NumberOfThreads, ThreadIdType, 1, ITK_MAX_THREADS); ^ /<>/Modules/Core/Common/include/itkMacro.h:1072:16: note: expanded from macro 'itkSetClampMacro' virtual void Set##name (type _arg) \ ^ :125:1: note: expanded from here SetNumberOfThreads ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest6.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkImageToParametricSpaceFilterTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkImageToParametricSpaceFilterTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkImageToParametricSpaceFilterTest.cxx:19: In file included from /<>/Modules/Core/Common/include/itkImageRegionIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegionConstIteratorWithIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkImageConstIteratorWithIndex.h:22: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkInteriorExteriorMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest5.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest5.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest5.cxx:20: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest7.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkInteriorExteriorMeshFilterTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkInteriorExteriorMeshFilterTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkInteriorExteriorMeshFilterTest.cxx:20: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkParametricSpaceToImageSpaceMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest6.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest6.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest6.cxx:19: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest8.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itkDeformableTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkDeformableTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkDeformableTest.cxx:21: In file included from /<>/Modules/Compatibility/Deprecated/include/itkDeformableMesh3DFilter.h:25: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkDeformableTest.cxx:21: /<>/Modules/Compatibility/Deprecated/include/itkDeformableMesh3DFilter.h:164:16: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateData(); ^ /<>/Modules/Compatibility/Deprecated/test/itkDeformableTest.cxx:228:3: note: in instantiation of template class 'itk::DeformableMesh3DFilter >, itk::Mesh > >' requested here DFilter::Pointer m_dfilter = DFilter::New(); ^ /<>/Modules/Core/Common/include/itkProcessObject.h:744:16: note: overridden virtual function is here virtual void GenerateData() {} ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itkNonUniformBSplineTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest3.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest3.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest3.cxx:19: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest9.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itkNonUniformBSplineTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkNonUniformBSplineTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkNonUniformBSplineTest.cxx:19: In file included from /<>/Modules/Compatibility/Deprecated/include/itkNonUniformBSpline.h:25: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itkReflectImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itkReflectImageFilterTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkReflectImageFilterTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkReflectImageFilterTest.cxx:19: In file included from /<>/Modules/Compatibility/Deprecated/include/itkReflectImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkReflectImageFilterTest.cxx:19: /<>/Modules/Compatibility/Deprecated/include/itkReflectImageFilter.h:92:8: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void GenerateData(); ^ /<>/Modules/Compatibility/Deprecated/test/itkReflectImageFilterTest.cxx:93:3: note: in instantiation of template class 'itk::ReflectImageFilter, itk::Image >' requested here myFilterType::Pointer filter = myFilterType::New(); ^ /<>/Modules/Core/Common/include/itkImageSource.h:238:16: note: overridden virtual function is here virtual void GenerateData() ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itkShiftScaleInPlaceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkParametricSpaceToImageSpaceMeshFilterTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkParametricSpaceToImageSpaceMeshFilterTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkParametricSpaceToImageSpaceMeshFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkRegularSphereMeshSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ConvertAnalyzeFile.dir/ConvertAnalyzeFile.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/ConvertAnalyzeFile.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/ConvertAnalyzeFile.cxx:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../../bin/ConvertAnalyzeFile make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest9.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest9.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest9.cxx:19: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest10.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConvertAnalyzeFile.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ConvertAnalyzeFile.dir/ConvertAnalyzeFile.cxx.o -o ../../../../bin/ConvertAnalyzeFile ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKAnalyzeIO-TestHelper.so ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKDeprecated-4.12.so.1 ../../../../lib/libITKDICOMParser-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm ../../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ConvertAnalyzeFile make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/FEM/CMakeFiles/ITKFEMRegistrationHeaderTest1.dir/build.make Modules/Registration/FEM/CMakeFiles/ITKFEMRegistrationHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating test/ITKFEMRegistrationHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/FEM && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKFEMRegistration /<>/Modules/Registration/FEM /<>/BUILD/Modules/Registration/FEM 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/FEM /<>/BUILD /<>/BUILD/Modules/Registration/FEM /<>/BUILD/Modules/Registration/FEM/CMakeFiles/ITKFEMRegistrationHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFEMRegistrationHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/FEM/CMakeFiles/ITKFEMRegistrationHeaderTest1.dir/build.make Modules/Registration/FEM/CMakeFiles/ITKFEMRegistrationHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Registration/FEM/CMakeFiles/ITKFEMRegistrationHeaderTest1.dir/test/ITKFEMRegistrationHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itkShiftScaleInPlaceImageFilterTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkShiftScaleInPlaceImageFilterTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkShiftScaleInPlaceImageFilterTest.cxx:22: In file included from /<>/Modules/Filtering/ImageIntensity/include/itkShiftScaleImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkShiftScaleInPlaceImageFilterTest.cxx:23: /<>/Modules/Compatibility/Deprecated/include/itkShiftScaleInPlaceImageFilter.h:122:8: warning: 'BeforeThreadedGenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void BeforeThreadedGenerateData(); ^ /<>/Modules/Compatibility/Deprecated/test/itkShiftScaleInPlaceImageFilterTest.cxx:100:3: note: in instantiation of template class 'itk::ShiftScaleInPlaceImageFilter >' requested here InPlaceFilterType::Pointer inPlaceFilter = InPlaceFilterType::New(); ^ /<>/Modules/Core/Common/include/itkImageSource.h:282:16: note: overridden virtual function is here virtual void BeforeThreadedGenerateData() {} ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkShiftScaleInPlaceImageFilterTest.cxx:23: /<>/Modules/Compatibility/Deprecated/include/itkShiftScaleInPlaceImageFilter.h:125:8: warning: 'AfterThreadedGenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void AfterThreadedGenerateData(); ^ /<>/Modules/Core/Common/include/itkImageSource.h:294:16: note: overridden virtual function is here virtual void AfterThreadedGenerateData() {} ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkShiftScaleInPlaceImageFilterTest.cxx:23: /<>/Modules/Compatibility/Deprecated/include/itkShiftScaleInPlaceImageFilter.h:128:9: warning: 'ThreadedGenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void ThreadedGenerateData(const OutputImageRegionType & ^ /<>/Modules/Core/Common/include/itkImageSource.h:262:16: note: overridden virtual function is here virtual void ThreadedGenerateData(const OutputImageRegionType & outputRegionForThread, ^ 4 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itkTwoOutputExampleImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/ITKFEMTestDriver.cxx.o -c /<>/BUILD/Modules/Numerics/FEM/test/ITKFEMTestDriver.cxx In file included from /<>/BUILD/Modules/Numerics/FEM/test/ITKFEMTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/FEM && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMRegistrationHeaderTest1.dir/test/ITKFEMRegistrationHeaderTest1.cxx.o -c /<>/BUILD/Modules/Registration/FEM/test/ITKFEMRegistrationHeaderTest1.cxx In file included from /<>/BUILD/Modules/Registration/FEM/test/ITKFEMRegistrationHeaderTest1.cxx:23: In file included from /<>/Modules/Registration/FEM/include/itkFEMRegistrationFilter.hxx:21: In file included from /<>/Modules/Registration/FEM/include/itkFEMRegistrationFilter.h:25: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolverCrankNicolson.h:22: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMExceptionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../bin/ITKFEMRegistrationHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/FEM && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFEMRegistrationHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKFEMRegistrationHeaderTest1.dir/test/ITKFEMRegistrationHeaderTest1.cxx.o -o ../../../bin/ITKFEMRegistrationHeaderTest1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 -lm ../../../lib/libITKMetaIO-4.12.so.1 -lz make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKFEMRegistrationHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DMembraneTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkRegularSphereMeshSourceTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkRegularSphereMeshSourceTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkRegularSphereMeshSourceTest.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkRegularSphereMeshSourceTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMExceptionTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMExceptionTest.cxx make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Mesh/CMakeFiles/ITKIOMesh-all.dir/build.make Modules/IO/Mesh/CMakeFiles/ITKIOMesh-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Mesh /<>/BUILD /<>/BUILD/Modules/IO/Mesh /<>/BUILD/Modules/IO/Mesh/CMakeFiles/ITKIOMesh-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMesh-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Mesh/CMakeFiles/ITKIOMesh-all.dir/build.make Modules/IO/Mesh/CMakeFiles/ITKIOMesh-all.dir/build make[3]: Nothing to be done for 'Modules/IO/Mesh/CMakeFiles/ITKIOMesh-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOMesh-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/CSV/CMakeFiles/ITKIOCSV-all.dir/build.make Modules/IO/CSV/CMakeFiles/ITKIOCSV-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/CSV /<>/BUILD /<>/BUILD/Modules/IO/CSV /<>/BUILD/Modules/IO/CSV/CMakeFiles/ITKIOCSV-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOCSV-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/CSV/CMakeFiles/ITKIOCSV-all.dir/build.make Modules/IO/CSV/CMakeFiles/ITKIOCSV-all.dir/build make[3]: Nothing to be done for 'Modules/IO/CSV/CMakeFiles/ITKIOCSV-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOCSV-all make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DMembraneTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DMembraneTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DMembraneTest.cxx make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GE/CMakeFiles/ITKIOGE-all.dir/build.make Modules/IO/GE/CMakeFiles/ITKIOGE-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/GE /<>/BUILD /<>/BUILD/Modules/IO/GE /<>/BUILD/Modules/IO/GE/CMakeFiles/ITKIOGE-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOGE-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/GE/CMakeFiles/ITKIOGE-all.dir/build.make Modules/IO/GE/CMakeFiles/ITKIOGE-all.dir/build make[3]: Nothing to be done for 'Modules/IO/GE/CMakeFiles/ITKIOGE-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOGE-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/Siemens/CMakeFiles/ITKIOSiemens-all.dir/build.make Modules/IO/Siemens/CMakeFiles/ITKIOSiemens-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/Siemens /<>/BUILD /<>/BUILD/Modules/IO/Siemens /<>/BUILD/Modules/IO/Siemens/CMakeFiles/ITKIOSiemens-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSiemens-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/Siemens/CMakeFiles/ITKIOSiemens-all.dir/build.make Modules/IO/Siemens/CMakeFiles/ITKIOSiemens-all.dir/build make[3]: Nothing to be done for 'Modules/IO/Siemens/CMakeFiles/ITKIOSiemens-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOSiemens-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/HDF5/CMakeFiles/ITKIOHDF5-all.dir/build.make Modules/IO/HDF5/CMakeFiles/ITKIOHDF5-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/HDF5 /<>/BUILD /<>/BUILD/Modules/IO/HDF5 /<>/BUILD/Modules/IO/HDF5/CMakeFiles/ITKIOHDF5-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOHDF5-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/HDF5/CMakeFiles/ITKIOHDF5-all.dir/build.make Modules/IO/HDF5/CMakeFiles/ITKIOHDF5-all.dir/build make[3]: Nothing to be done for 'Modules/IO/HDF5/CMakeFiles/ITKIOHDF5-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOHDF5-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/MRC/CMakeFiles/ITKIOMRC-all.dir/build.make Modules/IO/MRC/CMakeFiles/ITKIOMRC-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/MRC /<>/BUILD /<>/BUILD/Modules/IO/MRC /<>/BUILD/Modules/IO/MRC/CMakeFiles/ITKIOMRC-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOMRC-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/MRC/CMakeFiles/ITKIOMRC-all.dir/build.make Modules/IO/MRC/CMakeFiles/ITKIOMRC-all.dir/build make[3]: Nothing to be done for 'Modules/IO/MRC/CMakeFiles/ITKIOMRC-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOMRC-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/RAW/CMakeFiles/ITKIORAW-all.dir/build.make Modules/IO/RAW/CMakeFiles/ITKIORAW-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/RAW /<>/BUILD /<>/BUILD/Modules/IO/RAW /<>/BUILD/Modules/IO/RAW/CMakeFiles/ITKIORAW-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIORAW-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/RAW/CMakeFiles/ITKIORAW-all.dir/build.make Modules/IO/RAW/CMakeFiles/ITKIORAW-all.dir/build make[3]: Nothing to be done for 'Modules/IO/RAW/CMakeFiles/ITKIORAW-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIORAW-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformFactory/CMakeFiles/ITKTransformFactory-all.dir/build.make Modules/IO/TransformFactory/CMakeFiles/ITKTransformFactory-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformFactory /<>/BUILD /<>/BUILD/Modules/IO/TransformFactory /<>/BUILD/Modules/IO/TransformFactory/CMakeFiles/ITKTransformFactory-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTransformFactory-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformFactory/CMakeFiles/ITKTransformFactory-all.dir/build.make Modules/IO/TransformFactory/CMakeFiles/ITKTransformFactory-all.dir/build make[3]: Nothing to be done for 'Modules/IO/TransformFactory/CMakeFiles/ITKTransformFactory-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKTransformFactory-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformBase/CMakeFiles/ITKIOTransformBase-all.dir/build.make Modules/IO/TransformBase/CMakeFiles/ITKIOTransformBase-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformBase /<>/BUILD /<>/BUILD/Modules/IO/TransformBase /<>/BUILD/Modules/IO/TransformBase/CMakeFiles/ITKIOTransformBase-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformBase-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformBase/CMakeFiles/ITKIOTransformBase-all.dir/build.make Modules/IO/TransformBase/CMakeFiles/ITKIOTransformBase-all.dir/build make[3]: Nothing to be done for 'Modules/IO/TransformBase/CMakeFiles/ITKIOTransformBase-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOTransformBase-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformHDF5/test/CMakeFiles/ITKIOTransformHDF5TestDriver.dir/build.make Modules/IO/TransformHDF5/test/CMakeFiles/ITKIOTransformHDF5TestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformHDF5/test /<>/BUILD /<>/BUILD/Modules/IO/TransformHDF5/test /<>/BUILD/Modules/IO/TransformHDF5/test/CMakeFiles/ITKIOTransformHDF5TestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformHDF5TestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformHDF5/test/CMakeFiles/ITKIOTransformHDF5TestDriver.dir/build.make Modules/IO/TransformHDF5/test/CMakeFiles/ITKIOTransformHDF5TestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/TransformHDF5/test/CMakeFiles/ITKIOTransformHDF5TestDriver.dir/ITKIOTransformHDF5TestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest7.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest7.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest7.cxx:19: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest11.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itkTwoOutputExampleImageFilterTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkTwoOutputExampleImageFilterTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkTwoOutputExampleImageFilterTest.cxx:19: In file included from /<>/Modules/Core/TestKernel/include/itkRandomImageSource.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkTwoOutputExampleImageFilterTest.cxx:20: /<>/Modules/Compatibility/Deprecated/include/itkTwoOutputExampleImageFilter.h:122:8: warning: 'ThreadedGenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void ThreadedGenerateData(const OutputImageRegionType & outputRegionForThread, ^ /<>/Modules/Compatibility/Deprecated/test/itkTwoOutputExampleImageFilterTest.cxx:50:8: note: in instantiation of template class 'itk::TwoOutputExampleImageFilter >' requested here itk::TwoOutputExampleImageFilter::Pointer threshold; ^ /<>/Modules/Core/Common/include/itkImageSource.h:262:16: note: overridden virtual function is here virtual void ThreadedGenerateData(const OutputImageRegionType & outputRegionForThread, ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itkStreamingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest10.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest10.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest10.cxx:19: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest12.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkRegularSphereMeshSourceTest2.cxx.o -c /<>/Modules/Core/Mesh/test/itkRegularSphereMeshSourceTest2.cxx In file included from /<>/Modules/Core/Mesh/test/itkRegularSphereMeshSourceTest2.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkSimplexMeshTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest11.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest11.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest11.cxx:19: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/NIFTI/test/CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiReadAnalyzeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itkStreamingImageFilterTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkStreamingImageFilterTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkStreamingImageFilterTest.cxx:20: In file included from /<>/Modules/Filtering/ImageGrid/include/itkShrinkImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itkStreamingImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkSimplexMeshTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkSimplexMeshTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkSimplexMeshTest.cxx:21: In file included from /<>/Modules/Core/Mesh/include/itkSimplexMesh.h:21: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkSimplexMeshAdaptTopologyFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Registration/FEM/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMRegistrationTestDriver.dir/ITKFEMRegistrationTestDriver.cxx.o -c /<>/BUILD/Modules/Registration/FEM/test/ITKFEMRegistrationTestDriver.cxx In file included from /<>/BUILD/Modules/Registration/FEM/test/ITKFEMRegistrationTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Registration/FEM/test/CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkFEMFiniteDifferenceFunctionLoadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest12.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest12.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest12.cxx:19: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itkStreamingImageFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itkStreamingImageFilterTest2.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkStreamingImageFilterTest2.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkStreamingImageFilterTest2.cxx:20: In file included from /<>/Modules/Filtering/ImageGrid/include/itkShrinkImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkStreamingImageFilterTest2.cxx:22: /<>/Modules/Compatibility/Deprecated/include/itkImageRegionMultidimensionalSplitter.h:94:24: warning: 'GetNumberOfSplits' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual unsigned int GetNumberOfSplits(const RegionType & region, ^ /<>/Modules/Compatibility/Deprecated/test/itkStreamingImageFilterTest2.cxx:69:8: note: in instantiation of template class 'itk::ImageRegionMultidimensionalSplitter<2>' requested here itk::ImageRegionMultidimensionalSplitter<2>::Pointer splitter; ^ /<>/Modules/Compatibility/Deprecated/include/itkImageRegionSplitter.h:106:24: note: overridden virtual function is here virtual unsigned int GetNumberOfSplits(const RegionType & region, ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkStreamingImageFilterTest2.cxx:22: /<>/Modules/Compatibility/Deprecated/include/itkImageRegionMultidimensionalSplitter.h:100:22: warning: 'GetSplit' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual RegionType GetSplit(unsigned int i, unsigned int numberOfPieces, ^ /<>/Modules/Compatibility/Deprecated/include/itkImageRegionSplitter.h:113:22: note: overridden virtual function is here virtual RegionType GetSplit(unsigned int i, unsigned int numberOfPieces, ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itkTransformToDisplacementFieldSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiReadAnalyzeTest.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiReadAnalyzeTest.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiReadAnalyzeTest.cxx:21: In file included from /<>/Modules/IO/NIFTI/include/itkNiftiImageIO.h:25: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/ITKDeprecatedTestDriver.dir/itkTransformToDisplacementFieldSourceTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/NIFTI/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/usr/include/nifti -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/IO/NIFTI/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest8.cxx.o -c /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest8.cxx In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest8.cxx:19: In file included from /<>/Modules/IO/NIFTI/test/itkNiftiImageIOTest.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../../bin/ITKIONIFTITestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/NIFTI/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIONIFTITestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIONIFTITestDriver.dir/ITKIONIFTITestDriver.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest2.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest3.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest4.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest5.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest6.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest7.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest8.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest9.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest10.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest11.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiImageIOTest12.cxx.o CMakeFiles/ITKIONIFTITestDriver.dir/itkNiftiReadAnalyzeTest.cxx.o -o ../../../../bin/ITKIONIFTITestDriver -lznz -lniftiio -ldouble-conversion ../../../../lib/libITKIONIFTI-TestSupport.so -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 -lznz -lniftiio -ldouble-conversion /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIONIFTITestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformHDF5/CMakeFiles/ITKIOTransformHDF5HeaderTest1.dir/build.make Modules/IO/TransformHDF5/CMakeFiles/ITKIOTransformHDF5HeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating test/ITKIOTransformHDF5HeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformHDF5 && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOTransformHDF5 /<>/Modules/IO/TransformHDF5 /<>/BUILD/Modules/IO/TransformHDF5 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformHDF5 /<>/BUILD /<>/BUILD/Modules/IO/TransformHDF5 /<>/BUILD/Modules/IO/TransformHDF5/CMakeFiles/ITKIOTransformHDF5HeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformHDF5HeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformHDF5/CMakeFiles/ITKIOTransformHDF5HeaderTest1.dir/build.make Modules/IO/TransformHDF5/CMakeFiles/ITKIOTransformHDF5HeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/TransformHDF5/CMakeFiles/ITKIOTransformHDF5HeaderTest1.dir/test/ITKIOTransformHDF5HeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformHDF5 && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformHDF5HeaderTest1.dir/test/ITKIOTransformHDF5HeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/TransformHDF5/test/ITKIOTransformHDF5HeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/TransformHDF5/test/ITKIOTransformHDF5HeaderTest1.cxx:23: In file included from /<>/Modules/IO/TransformHDF5/include/itkHDF5TransformIO.hxx:21: In file included from /<>/Modules/IO/TransformHDF5/include/itkHDF5TransformIO.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../bin/ITKIOTransformHDF5HeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformHDF5 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformHDF5HeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOTransformHDF5HeaderTest1.dir/test/ITKIOTransformHDF5HeaderTest1.cxx.o -o ../../../bin/ITKIOTransformHDF5HeaderTest1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOTransformHDF5HeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformInsightLegacy/test/CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/build.make Modules/IO/TransformInsightLegacy/test/CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformInsightLegacy/test /<>/BUILD /<>/BUILD/Modules/IO/TransformInsightLegacy/test /<>/BUILD/Modules/IO/TransformInsightLegacy/test/CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformInsightLegacyTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformInsightLegacy/test/CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/build.make Modules/IO/TransformInsightLegacy/test/CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/TransformInsightLegacy/test/CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/ITKIOTransformInsightLegacyTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itkTransformToDisplacementFieldSourceTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest.cxx:19: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest.cxx:21: /<>/Modules/Compatibility/Deprecated/include/itkTransformToDisplacementFieldSource.h:156:16: warning: 'GenerateOutputInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateOutputInformation(); ^ /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest.cxx:70:11: note: in instantiation of template class 'itk::TransformToDisplacementFieldSource, 2>, double>' requested here typedef DisplacementFieldGeneratorType::SizeType SizeType; ^ /<>/Modules/Core/Common/include/itkProcessObject.h:741:16: note: overridden virtual function is here virtual void GenerateOutputInformation(); ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest.cxx:21: /<>/Modules/Compatibility/Deprecated/include/itkTransformToDisplacementFieldSource.h:159:16: warning: 'BeforeThreadedGenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void BeforeThreadedGenerateData(); ^ /<>/Modules/Core/Common/include/itkImageSource.h:282:16: note: overridden virtual function is here virtual void BeforeThreadedGenerateData() {} ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest.cxx:21: /<>/Modules/Compatibility/Deprecated/include/itkTransformToDisplacementFieldSource.h:162:20: warning: 'GetMTime' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] ModifiedTimeType GetMTime() const; ^ /<>/Modules/Core/Common/include/itkObject.h:94:28: note: overridden virtual function is here virtual ModifiedTimeType GetMTime() const; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest.cxx:21: /<>/Modules/Compatibility/Deprecated/include/itkTransformToDisplacementFieldSource.h:182:8: warning: 'ThreadedGenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void ThreadedGenerateData( ^ /<>/Modules/Core/Common/include/itkImageSource.h:262:16: note: overridden virtual function is here virtual void ThreadedGenerateData(const OutputImageRegionType & outputRegionForThread, ^ 5 warnings generated. make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformInsightLegacy/CMakeFiles/ITKIOTransformInsightLegacyHeaderTest1.dir/build.make Modules/IO/TransformInsightLegacy/CMakeFiles/ITKIOTransformInsightLegacyHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating test/ITKIOTransformInsightLegacyHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformInsightLegacy && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOTransformInsightLegacy /<>/Modules/IO/TransformInsightLegacy /<>/BUILD/Modules/IO/TransformInsightLegacy 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformInsightLegacy /<>/BUILD /<>/BUILD/Modules/IO/TransformInsightLegacy /<>/BUILD/Modules/IO/TransformInsightLegacy/CMakeFiles/ITKIOTransformInsightLegacyHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformInsightLegacyHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformInsightLegacy/CMakeFiles/ITKIOTransformInsightLegacyHeaderTest1.dir/build.make Modules/IO/TransformInsightLegacy/CMakeFiles/ITKIOTransformInsightLegacyHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/TransformInsightLegacy/CMakeFiles/ITKIOTransformInsightLegacyHeaderTest1.dir/test/ITKIOTransformInsightLegacyHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itkStreamingImageFilterTest3.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkStreamingImageFilterTest3.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkStreamingImageFilterTest3.cxx:20: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkStreamingImageFilterTest3.cxx:24: /<>/Modules/Compatibility/Deprecated/include/itkImageRegionMultidimensionalSplitter.h:94:24: warning: 'GetNumberOfSplits' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual unsigned int GetNumberOfSplits(const RegionType & region, ^ /<>/Modules/Compatibility/Deprecated/test/itkStreamingImageFilterTest3.cxx:57:8: note: in instantiation of template class 'itk::ImageRegionMultidimensionalSplitter<2>' requested here itk::ImageRegionMultidimensionalSplitter<2>::Pointer splitter; ^ /<>/Modules/Compatibility/Deprecated/include/itkImageRegionSplitter.h:106:24: note: overridden virtual function is here virtual unsigned int GetNumberOfSplits(const RegionType & region, ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkStreamingImageFilterTest3.cxx:24: /<>/Modules/Compatibility/Deprecated/include/itkImageRegionMultidimensionalSplitter.h:100:22: warning: 'GetSplit' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual RegionType GetSplit(unsigned int i, unsigned int numberOfPieces, ^ /<>/Modules/Compatibility/Deprecated/include/itkImageRegionSplitter.h:113:22: note: overridden virtual function is here virtual RegionType GetSplit(unsigned int i, unsigned int numberOfPieces, ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformMatlab/CMakeFiles/ITKIOTransformMatlabHeaderTest1.dir/build.make Modules/IO/TransformMatlab/CMakeFiles/ITKIOTransformMatlabHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating test/ITKIOTransformMatlabHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformMatlab && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKIOTransformMatlab /<>/Modules/IO/TransformMatlab /<>/BUILD/Modules/IO/TransformMatlab 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformMatlab /<>/BUILD /<>/BUILD/Modules/IO/TransformMatlab /<>/BUILD/Modules/IO/TransformMatlab/CMakeFiles/ITKIOTransformMatlabHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformMatlabHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformMatlab/CMakeFiles/ITKIOTransformMatlabHeaderTest1.dir/build.make Modules/IO/TransformMatlab/CMakeFiles/ITKIOTransformMatlabHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/TransformMatlab/CMakeFiles/ITKIOTransformMatlabHeaderTest1.dir/test/ITKIOTransformMatlabHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkSimplexMeshAdaptTopologyFilterTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkSimplexMeshAdaptTopologyFilterTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkSimplexMeshAdaptTopologyFilterTest.cxx:18: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkSimplexMeshToTriangleMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformMatlab && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformMatlabHeaderTest1.dir/test/ITKIOTransformMatlabHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/TransformMatlab/test/ITKIOTransformMatlabHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/TransformMatlab/test/ITKIOTransformMatlabHeaderTest1.cxx:23: In file included from /<>/Modules/IO/TransformMatlab/include/itkMatlabTransformIO.hxx:21: In file included from /<>/Modules/IO/TransformMatlab/include/itkMatlabTransformIO.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../bin/ITKIOTransformMatlabHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformInsightLegacy && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/usr/include/double-conversion -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformInsightLegacyHeaderTest1.dir/test/ITKIOTransformInsightLegacyHeaderTest1.cxx.o -c /<>/BUILD/Modules/IO/TransformInsightLegacy/test/ITKIOTransformInsightLegacyHeaderTest1.cxx In file included from /<>/BUILD/Modules/IO/TransformInsightLegacy/test/ITKIOTransformInsightLegacyHeaderTest1.cxx:23: In file included from /<>/Modules/IO/TransformInsightLegacy/include/itkTxtTransformIO.hxx:21: In file included from /<>/Modules/IO/TransformInsightLegacy/include/itkTxtTransformIO.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../bin/ITKIOTransformInsightLegacyHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformMatlab && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformMatlabHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOTransformMatlabHeaderTest1.dir/test/ITKIOTransformMatlabHeaderTest1.cxx.o -o ../../../bin/ITKIOTransformMatlabHeaderTest1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOTransformMatlabHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformMatlab/test/CMakeFiles/ITKIOTransformMatlabTestDriver.dir/build.make Modules/IO/TransformMatlab/test/CMakeFiles/ITKIOTransformMatlabTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformInsightLegacy && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformInsightLegacyHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOTransformInsightLegacyHeaderTest1.dir/test/ITKIOTransformInsightLegacyHeaderTest1.cxx.o -o ../../../bin/ITKIOTransformInsightLegacyHeaderTest1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOTransformInsightLegacyHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/IntegratedTest/CMakeFiles/ITKIntegratedTest-all.dir/build.make Modules/Nonunit/IntegratedTest/CMakeFiles/ITKIntegratedTest-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/IntegratedTest /<>/BUILD /<>/BUILD/Modules/Nonunit/IntegratedTest /<>/BUILD/Modules/Nonunit/IntegratedTest/CMakeFiles/ITKIntegratedTest-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIntegratedTest-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/IntegratedTest/CMakeFiles/ITKIntegratedTest-all.dir/build.make Modules/Nonunit/IntegratedTest/CMakeFiles/ITKIntegratedTest-all.dir/build make[3]: Nothing to be done for 'Modules/Nonunit/IntegratedTest/CMakeFiles/ITKIntegratedTest-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIntegratedTest-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/QuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFiltering-all.dir/build.make Modules/Filtering/QuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFiltering-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/QuadEdgeMeshFiltering /<>/BUILD /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering /<>/BUILD/Modules/Filtering/QuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFiltering-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMeshFiltering-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Filtering/QuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFiltering-all.dir/build.make Modules/Filtering/QuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFiltering-all.dir/build make[3]: Nothing to be done for 'Modules/Filtering/QuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFiltering-all.dir/build'. make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformMatlab/test /<>/BUILD /<>/BUILD/Modules/IO/TransformMatlab/test /<>/BUILD/Modules/IO/TransformMatlab/test/CMakeFiles/ITKIOTransformMatlabTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformMatlabTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformMatlab/test/CMakeFiles/ITKIOTransformMatlabTestDriver.dir/build.make Modules/IO/TransformMatlab/test/CMakeFiles/ITKIOTransformMatlabTestDriver.dir/build make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKQuadEdgeMeshFiltering-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/build.make Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/TransformMatlab/test/CMakeFiles/ITKIOTransformMatlabTestDriver.dir/ITKIOTransformMatlabTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKDeprecatedTestDriver.dir/itkTransformToDisplacementFieldSourceTest1.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest1.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest1.cxx:26: In file included from /<>/Modules/Compatibility/Deprecated/include/itkTransformToDisplacementFieldSource.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest1.cxx:28: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest1.cxx:57:11: note: in instantiation of template class 'itk::Euler3DTransform' requested here typedef TransformType::ParametersType ParametersType; ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest1.cxx:26: /<>/Modules/Compatibility/Deprecated/include/itkTransformToDisplacementFieldSource.h:156:16: warning: 'GenerateOutputInformation' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateOutputInformation(); ^ /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest1.cxx:207:3: note: in instantiation of template class 'itk::TransformToDisplacementFieldSource, 3>, double>' requested here DisplacementFieldGeneratorType::Pointer defGenerator ^ /<>/Modules/Core/Common/include/itkProcessObject.h:741:16: note: overridden virtual function is here virtual void GenerateOutputInformation(); ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest1.cxx:26: /<>/Modules/Compatibility/Deprecated/include/itkTransformToDisplacementFieldSource.h:159:16: warning: 'BeforeThreadedGenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void BeforeThreadedGenerateData(); ^ /<>/Modules/Core/Common/include/itkImageSource.h:282:16: note: overridden virtual function is here virtual void BeforeThreadedGenerateData() {} ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest1.cxx:26: /<>/Modules/Compatibility/Deprecated/include/itkTransformToDisplacementFieldSource.h:162:20: warning: 'GetMTime' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] ModifiedTimeType GetMTime() const; ^ /<>/Modules/Core/Common/include/itkObject.h:94:28: note: overridden virtual function is here virtual ModifiedTimeType GetMTime() const; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkTransformToDisplacementFieldSourceTest1.cxx:26: /<>/Modules/Compatibility/Deprecated/include/itkTransformToDisplacementFieldSource.h:182:8: warning: 'ThreadedGenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] void ThreadedGenerateData( ^ /<>/Modules/Core/Common/include/itkImageSource.h:262:16: note: overridden virtual function is here virtual void ThreadedGenerateData(const OutputImageRegionType & outputRegionForThread, ^ 6 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../../bin/ITKDeprecatedTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/Review/test /<>/BUILD /<>/BUILD/Modules/Nonunit/Review/test /<>/BUILD/Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target ITKReviewTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/build.make Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/ITKReviewTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDeprecatedTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKDeprecatedTestDriver.dir/ITKDeprecatedTestDriver.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itkSymmetricEigenSystemTest.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itk2DDeformableTest.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itkDeformableTest.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itkNonThreadedShrinkImageTest.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itkNonUniformBSplineTest.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itkReflectImageFilterTest.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itkShiftScaleInPlaceImageFilterTest.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itkTwoOutputExampleImageFilterTest.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itkStreamingImageFilterTest.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itkStreamingImageFilterTest2.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itkStreamingImageFilterTest3.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itkTransformToDisplacementFieldSourceTest.cxx.o CMakeFiles/ITKDeprecatedTestDriver.dir/itkTransformToDisplacementFieldSourceTest1.cxx.o -o ../../../../bin/ITKDeprecatedTestDriver ../../../../lib/libITKDeprecated-4.12.so.1 ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKDICOMParser-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKDeprecatedTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/Review/CMakeFiles/ITKReviewHeaderTest1.dir/build.make Modules/Nonunit/Review/CMakeFiles/ITKReviewHeaderTest1.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating test/ITKReviewHeaderTest1.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKReview /<>/Modules/Nonunit/Review /<>/BUILD/Modules/Nonunit/Review 35 1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/Review /<>/BUILD /<>/BUILD/Modules/Nonunit/Review /<>/BUILD/Modules/Nonunit/Review/CMakeFiles/ITKReviewHeaderTest1.dir/DependInfo.cmake --color= Scanning dependencies of target ITKReviewHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/Review/CMakeFiles/ITKReviewHeaderTest1.dir/build.make Modules/Nonunit/Review/CMakeFiles/ITKReviewHeaderTest1.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/CMakeFiles/ITKReviewHeaderTest1.dir/test/ITKReviewHeaderTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Registration/FEM/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkFEMFiniteDifferenceFunctionLoadTest.cxx.o -c /<>/Modules/Registration/FEM/test/itkFEMFiniteDifferenceFunctionLoadTest.cxx In file included from /<>/Modules/Registration/FEM/test/itkFEMFiniteDifferenceFunctionLoadTest.cxx:21: In file included from /<>/Modules/Registration/FEM/include/itkFEMFiniteDifferenceFunctionLoad.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Registration/FEM/test/CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkFEMRegistrationFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewHeaderTest1.dir/test/ITKReviewHeaderTest1.cxx.o -c /<>/BUILD/Modules/Nonunit/Review/test/ITKReviewHeaderTest1.cxx In file included from /<>/BUILD/Modules/Nonunit/Review/test/ITKReviewHeaderTest1.cxx:23: In file included from /<>/Modules/Nonunit/Review/include/itkVoxBoCUBImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../bin/ITKReviewHeaderTest1 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKReviewHeaderTest1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKReviewHeaderTest1.dir/test/ITKReviewHeaderTest1.cxx.o -o ../../../bin/ITKReviewHeaderTest1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 -lz ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkopenjpeg-4.12.so.1 -lm -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKReviewHeaderTest1 make[2]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/Review/CMakeFiles/ITKReviewHeaderTest2.dir/build.make Modules/Nonunit/Review/CMakeFiles/ITKReviewHeaderTest2.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating test/ITKReviewHeaderTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review && /usr/bin/python2.7 /<>/CMake/../Utilities/Maintenance/BuildHeaderTest.py ITKReview /<>/Modules/Nonunit/Review /<>/BUILD/Modules/Nonunit/Review 35 2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/Review /<>/BUILD /<>/BUILD/Modules/Nonunit/Review /<>/BUILD/Modules/Nonunit/Review/CMakeFiles/ITKReviewHeaderTest2.dir/DependInfo.cmake --color= Scanning dependencies of target ITKReviewHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/Review/CMakeFiles/ITKReviewHeaderTest2.dir/build.make Modules/Nonunit/Review/CMakeFiles/ITKReviewHeaderTest2.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/CMakeFiles/ITKReviewHeaderTest2.dir/test/ITKReviewHeaderTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewHeaderTest2.dir/test/ITKReviewHeaderTest2.cxx.o -c /<>/BUILD/Modules/Nonunit/Review/test/ITKReviewHeaderTest2.cxx In file included from /<>/BUILD/Modules/Nonunit/Review/test/ITKReviewHeaderTest2.cxx:23: In file included from /<>/Modules/Nonunit/Review/include/itkDiscreteHessianGaussianImageFunction.hxx:21: In file included from /<>/Modules/Nonunit/Review/include/itkDiscreteHessianGaussianImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkNeighborhoodOperatorImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../bin/ITKReviewHeaderTest2 make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkSimplexMeshToTriangleMeshFilterTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkSimplexMeshToTriangleMeshFilterTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkSimplexMeshToTriangleMeshFilterTest.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkSimplexMeshVolumeCalculatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKReviewHeaderTest2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKReviewHeaderTest2.dir/test/ITKReviewHeaderTest2.cxx.o -o ../../../bin/ITKReviewHeaderTest2 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 -lz ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../lib/libitkopenjpeg-4.12.so.1 -lm -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKReviewHeaderTest2 make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/build.make Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating itkPadImageFilterBasePython.cpp, ../../../lib/itkPadImageFilterBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkSimplexMeshVolumeCalculatorTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkSimplexMeshVolumeCalculatorTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkSimplexMeshVolumeCalculatorTest.cxx:21: In file included from /<>/Modules/Core/Mesh/include/itkSimplexMeshVolumeCalculator.h:22: In file included from /<>/Modules/Core/Common/include/itkPolygonCell.h:32: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkSphereMeshSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformHDF5/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformHDF5TestDriver.dir/ITKIOTransformHDF5TestDriver.cxx.o -c /<>/BUILD/Modules/IO/TransformHDF5/test/ITKIOTransformHDF5TestDriver.cxx In file included from /<>/BUILD/Modules/IO/TransformHDF5/test/ITKIOTransformHDF5TestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/TransformHDF5/test/CMakeFiles/ITKIOTransformHDF5TestDriver.dir/itkIOTransformHDF5Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkSphereMeshSourceTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkSphereMeshSourceTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkSphereMeshSourceTest.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkTransformMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkTransformMeshFilterTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkTransformMeshFilterTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkTransformMeshFilterTest.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkTransformMeshFilter.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Registration/FEM/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkFEMRegistrationFilterTest.cxx.o -c /<>/Modules/Registration/FEM/test/itkFEMRegistrationFilterTest.cxx In file included from /<>/Modules/Registration/FEM/test/itkFEMRegistrationFilterTest.cxx:19: In file included from /<>/Modules/Registration/FEM/include/itkFEMRegistrationFilter.h:25: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolverCrankNicolson.h:22: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Registration/FEM/test/CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkFEMRegistrationFilter2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformInsightLegacy/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/ITKIOTransformInsightLegacyTestDriver.cxx.o -c /<>/BUILD/Modules/IO/TransformInsightLegacy/test/ITKIOTransformInsightLegacyTestDriver.cxx In file included from /<>/BUILD/Modules/IO/TransformInsightLegacy/test/ITKIOTransformInsightLegacyTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/TransformInsightLegacy/test/CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/itkIOTransformTxtTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkTriangleMeshToBinaryImageFilterTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkTriangleMeshToBinaryImageFilterTest.cxx:27: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformMatlab/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformMatlab/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformMatlabTestDriver.dir/ITKIOTransformMatlabTestDriver.cxx.o -c /<>/BUILD/Modules/IO/TransformMatlab/test/ITKIOTransformMatlabTestDriver.cxx In file included from /<>/BUILD/Modules/IO/TransformMatlab/test/ITKIOTransformMatlabTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeRequiredIOFactories.h:21: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/TransformMatlab/test/CMakeFiles/ITKIOTransformMatlabTestDriver.dir/itkIOTransformMatlabTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/ITKReviewTestDriver.cxx.o -c /<>/BUILD/Modules/Nonunit/Review/test/ITKReviewTestDriver.cxx In file included from /<>/BUILD/Modules/Nonunit/Review/test/ITKReviewTestDriver.cxx:10: In file included from /<>/Modules/Core/TestKernel/include/itkTestDriverIncludeBuiltInIOFactories.h:20: In file included from /<>/Modules/IO/BioRad/include/itkBioRadImageIOFactory.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkAreaClosingImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformInsightLegacy/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/itkIOTransformTxtTest.cxx.o -c /<>/Modules/IO/TransformInsightLegacy/test/itkIOTransformTxtTest.cxx In file included from /<>/Modules/IO/TransformInsightLegacy/test/itkIOTransformTxtTest.cxx:22: In file included from /<>/Modules/IO/TransformInsightLegacy/include/itkTxtTransformIOFactory.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/TransformInsightLegacy/test/CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/itkIOEuler3DTransformTxtTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformInsightLegacy/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/itkIOEuler3DTransformTxtTest.cxx.o -c /<>/Modules/IO/TransformInsightLegacy/test/itkIOEuler3DTransformTxtTest.cxx In file included from /<>/Modules/IO/TransformInsightLegacy/test/itkIOEuler3DTransformTxtTest.cxx:19: In file included from /<>/Modules/IO/TransformBase/include/itkTransformFileWriter.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/IO/TransformInsightLegacy/test/itkIOEuler3DTransformTxtTest.cxx:23: In file included from /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:22: /<>/Modules/Core/Transform/include/itkRigid3DTransform.h:168:39: warning: 'GetInverseTransform' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual InverseTransformBasePointer GetInverseTransform() const; ^ /<>/Modules/Core/Transform/include/itkEuler3DTransform.h:48:10: note: in instantiation of template class 'itk::Rigid3DTransform' requested here public Rigid3DTransform ^ /<>/Modules/IO/TransformInsightLegacy/test/itkIOEuler3DTransformTxtTest.cxx:40:3: note: in instantiation of template class 'itk::Euler3DTransform' requested here TransformType::Pointer oldStyleInput, newStyleInput; ^ /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:449:39: note: overridden virtual function is here virtual InverseTransformBasePointer GetInverseTransform() const ITK_OVERRIDE; ^ 2 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../../bin/ITKIOTransformInsightLegacyTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformInsightLegacy/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/ITKIOTransformInsightLegacyTestDriver.cxx.o CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/itkIOTransformTxtTest.cxx.o CMakeFiles/ITKIOTransformInsightLegacyTestDriver.dir/itkIOEuler3DTransformTxtTest.cxx.o -o ../../../../bin/ITKIOTransformInsightLegacyTestDriver ../../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOTransformInsightLegacyTestDriver make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkAreaOpeningImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformMatlab/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformMatlab/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformMatlabTestDriver.dir/itkIOTransformMatlabTest.cxx.o -c /<>/Modules/IO/TransformMatlab/test/itkIOTransformMatlabTest.cxx In file included from /<>/Modules/IO/TransformMatlab/test/itkIOTransformMatlabTest.cxx:21: In file included from /<>/Modules/IO/TransformMatlab/include/itkMatlabTransformIOFactory.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../../bin/ITKIOTransformMatlabTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformMatlab/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformMatlabTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOTransformMatlabTestDriver.dir/ITKIOTransformMatlabTestDriver.cxx.o CMakeFiles/ITKIOTransformMatlabTestDriver.dir/itkIOTransformMatlabTest.cxx.o -o ../../../../bin/ITKIOTransformMatlabTestDriver ../../../../lib/libITKIOTransformMatlab-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOTransformMatlabTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingSwig.dir/build.make Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/AnisotropicSmoothing/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAnisotropicSmoothingSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingSwig.dir/build.make Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 83%] Generating ../../Typedefs/itkAnisotropicDiffusionImageFilter.i, ../../Typedefs/itkCurvatureAnisotropicDiffusionImageFilter.i, ../../Typedefs/itkGradientAnisotropicDiffusionImageFilter.i, ../../Typedefs/itkVectorCurvatureAnisotropicDiffusionImageFilter.i, ../../Typedefs/itkVectorGradientAnisotropicDiffusionImageFilter.i, ../../Typedefs/itkAnisotropicDiffusionImageFilterSwigInterface.h, ../../Typedefs/itkCurvatureAnisotropicDiffusionImageFilterSwigInterface.h, ../../Typedefs/itkGradientAnisotropicDiffusionImageFilterSwigInterface.h, ../../Typedefs/itkVectorCurvatureAnisotropicDiffusionImageFilterSwigInterface.h, ../../Typedefs/itkVectorGradientAnisotropicDiffusionImageFilterSwigInterface.h, ../../Typedefs/itkAnisotropicDiffusionImageFilter.idx, ../../Typedefs/itkCurvatureAnisotropicDiffusionImageFilter.idx, ../../Typedefs/itkGradientAnisotropicDiffusionImageFilter.idx, ../../Typedefs/itkVectorCurvatureAnisotropicDiffusionImageFilter.idx, ../../Typedefs/itkVectorGradientAnisotropicDiffusionImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest1.cxx.o -c /<>/Modules/Core/Mesh/test/itkTriangleMeshToBinaryImageFilterTest1.cxx In file included from /<>/Modules/Core/Mesh/test/itkTriangleMeshToBinaryImageFilterTest1.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkAreaClosingImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkAreaClosingImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkAreaClosingImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkBruker2DSEQImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkBruker2DSEQImageIOTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkBruker2DSEQImageIOTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkBruker2DSEQImageIOTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkConformalFlatteningMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkAreaOpeningImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkAreaOpeningImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkAreaOpeningImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkConformalFlatteningQuadEdgeMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest2.cxx.o -c /<>/Modules/Core/Mesh/test/itkTriangleMeshToBinaryImageFilterTest2.cxx In file included from /<>/Modules/Core/Mesh/test/itkTriangleMeshToBinaryImageFilterTest2.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKAnisotropicSmoothing.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCurvatureFlow.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkAnisotropicDiffusionImageFilter;itkCurvatureAnisotropicDiffusionImageFilter;itkGradientAnisotropicDiffusionImageFilter;itkVectorCurvatureAnisotropicDiffusionImageFilter;itkVectorGradientAnisotropicDiffusionImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKAnisotropicSmoothingSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelPython.dir/build.make Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating itkComparisonImageFilterPython.cpp, ../../../lib/itkComparisonImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkConformalFlatteningMeshFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkConformalFlatteningMeshFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkConformalFlatteningMeshFilterTest.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkMeshFileReader.h:26: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkContourExtractor2DImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkConformalFlatteningQuadEdgeMeshFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkConformalFlatteningQuadEdgeMeshFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkConformalFlatteningQuadEdgeMeshFilterTest.cxx:19: In file included from /<>/Modules/IO/Mesh/include/itkMeshFileReader.h:26: In file included from /<>/Modules/IO/Mesh/include/itkMeshIOBase.h:25: In file included from /<>/Modules/Core/Common/include/itkDiffusionTensor3D.h:26: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkDiffeomorphicDemonsRegistrationFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest3.cxx.o -c /<>/Modules/Core/Mesh/test/itkTriangleMeshToBinaryImageFilterTest3.cxx In file included from /<>/Modules/Core/Mesh/test/itkTriangleMeshToBinaryImageFilterTest3.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkTriangleMeshToBinaryImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkContourExtractor2DImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkContourExtractor2DImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkContourExtractor2DImageFilterTest.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkDiffeomorphicDemonsRegistrationFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformHDF5/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformHDF5TestDriver.dir/itkIOTransformHDF5Test.cxx.o -c /<>/Modules/IO/TransformHDF5/test/itkIOTransformHDF5Test.cxx In file included from /<>/Modules/IO/TransformHDF5/test/itkIOTransformHDF5Test.cxx:19: In file included from /<>/Modules/IO/TransformHDF5/include/itkHDF5TransformIOFactory.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/IO/TransformHDF5/test/CMakeFiles/ITKIOTransformHDF5TestDriver.dir/itkThinPlateTransformWriteReadTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformHDF5/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKIOTransformHDF5TestDriver.dir/itkThinPlateTransformWriteReadTest.cxx.o -c /<>/Modules/IO/TransformHDF5/test/itkThinPlateTransformWriteReadTest.cxx In file included from /<>/Modules/IO/TransformHDF5/test/itkThinPlateTransformWriteReadTest.cxx:25: In file included from /<>/Modules/IO/TransformBase/include/itkTransformFileWriter.h:23: In file included from /<>/Modules/IO/TransformBase/include/itkTransformIOBase.h:24: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Linking CXX executable ../../../../bin/ITKIOTransformHDF5TestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/IO/TransformHDF5/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformHDF5TestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKIOTransformHDF5TestDriver.dir/ITKIOTransformHDF5TestDriver.cxx.o CMakeFiles/ITKIOTransformHDF5TestDriver.dir/itkIOTransformHDF5Test.cxx.o CMakeFiles/ITKIOTransformHDF5TestDriver.dir/itkThinPlateTransformWriteReadTest.cxx.o -o ../../../../bin/ITKIOTransformHDF5TestDriver /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -lz -ldl -lm ../../../../lib/libITKIOTransformHDF5-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 83%] Built target ITKIOTransformHDF5TestDriver make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/build.make Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 83%] Generating itkSpatialObjectPropertyPython.cpp, ../../../lib/itkSpatialObjectPropertyPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTestKernel/itkComparisonImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkComparisonImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Generating itkPipelineMonitorImageFilterPython.cpp, ../../../lib/itkPipelineMonitorImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkDiffeomorphicDemonsRegistrationFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkDiffeomorphicDemonsRegistrationFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkDiffeomorphicDemonsRegistrationFilterTest.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkDiffeomorphicDemonsRegistrationFilter.h:21: In file included from /<>/Modules/Registration/PDEDeformable/include/itkPDEDeformableRegistrationFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkDirectFourierReconstructionImageToImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSpatialObjectPropertyPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSpatialObjectProperty.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Generating itkAffineGeometryFramePython.cpp, ../../../lib/itkAffineGeometryFramePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkDiffeomorphicDemonsRegistrationFilterTest2.cxx.o -c /<>/Modules/Nonunit/Review/test/itkDiffeomorphicDemonsRegistrationFilterTest2.cxx In file included from /<>/Modules/Nonunit/Review/test/itkDiffeomorphicDemonsRegistrationFilterTest2.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkDiffeomorphicDemonsRegistrationFilter.h:21: In file included from /<>/Modules/Registration/PDEDeformable/include/itkPDEDeformableRegistrationFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteGaussianDerivativeImageFilterScaleSpaceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest4.cxx.o -c /<>/Modules/Core/Mesh/test/itkTriangleMeshToBinaryImageFilterTest4.cxx In file included from /<>/Modules/Core/Mesh/test/itkTriangleMeshToBinaryImageFilterTest4.cxx:20: In file included from /<>/Modules/Core/Mesh/include/itkTriangleMeshToBinaryImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToSimplexMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteGaussianDerivativeImageFilterScaleSpaceTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkDiscreteGaussianDerivativeImageFilterScaleSpaceTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkDiscreteGaussianDerivativeImageFilterScaleSpaceTest.cxx:20: In file included from /<>/Modules/Nonunit/Review/include/itkDiscreteGaussianDerivativeImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteGaussianDerivativeImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkDirectFourierReconstructionImageToImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkDirectFourierReconstructionImageToImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkDirectFourierReconstructionImageToImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteGaussianDerivativeImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToSimplexMeshFilterTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkTriangleMeshToSimplexMeshFilterTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkTriangleMeshToSimplexMeshFilterTest.cxx:21: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkVTKPolyDataReaderTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkAffineGeometryFramePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAffineGeometryFrame.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Generating itkSpatialObjectBasePython.cpp, ../../../lib/itkSpatialObjectBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkVTKPolyDataReaderTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkVTKPolyDataReaderTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkVTKPolyDataReaderTest.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkVTKPolyDataReader.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkVTKPolyDataWriterTest01.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteGaussianDerivativeImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkDiscreteGaussianDerivativeImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkDiscreteGaussianDerivativeImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteGradientMagnitudeGaussianImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteGaussianDerivativeImageFunctionTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkDiscreteGaussianDerivativeImageFunctionTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkDiscreteGaussianDerivativeImageFunctionTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteHessianGaussianImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkVTKPolyDataWriterTest01.cxx.o -c /<>/Modules/Core/Mesh/test/itkVTKPolyDataWriterTest01.cxx In file included from /<>/Modules/Core/Mesh/test/itkVTKPolyDataWriterTest01.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkVTKPolyDataWriter.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkVTKPolyDataWriterTest02.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkVTKPolyDataWriterTest02.cxx.o -c /<>/Modules/Core/Mesh/test/itkVTKPolyDataWriterTest02.cxx In file included from /<>/Modules/Core/Mesh/test/itkVTKPolyDataWriterTest02.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkWarpMeshFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteGradientMagnitudeGaussianImageFunctionTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkDiscreteGradientMagnitudeGaussianImageFunctionTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkDiscreteGradientMagnitudeGaussianImageFunctionTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkFastApproximateRankImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteHessianGaussianImageFunctionTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkDiscreteHessianGaussianImageFunctionTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkDiscreteHessianGaussianImageFunctionTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkFastSymmetricForcesDemonsRegistrationFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkWarpMeshFilterTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkWarpMeshFilterTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkWarpMeshFilterTest.cxx:20: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkMeshTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSpatialObjectBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSpatialObjectBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Generating itkSpatialObjectPointPython.cpp, ../../../lib/itkSpatialObjectPointPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkMeshTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkMeshTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkMeshTest.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 83%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkBinaryMask3DMeshSourceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkFastApproximateRankImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkFastApproximateRankImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkFastApproximateRankImageFilterTest.cxx:20: In file included from /<>/Modules/Nonunit/Review/include/itkFastApproximateRankImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMiniPipelineSeparableImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkGridForwardWarpImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkFastSymmetricForcesDemonsRegistrationFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkFastSymmetricForcesDemonsRegistrationFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkFastSymmetricForcesDemonsRegistrationFilterTest.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkFastSymmetricForcesDemonsRegistrationFilter.h:21: In file included from /<>/Modules/Registration/PDEDeformable/include/itkPDEDeformableRegistrationFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkGridForwardWarpImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkGridForwardWarpImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkGridForwardWarpImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOFactoryTest01.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkImageFunctionTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkImageFunctionTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkImageFunctionTest.cxx:21: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIORegionOfInterest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkBinaryMask3DMeshSourceTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkBinaryMask3DMeshSourceTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkBinaryMask3DMeshSourceTest.cxx:21: In file included from /<>/Modules/Core/Mesh/include/itkBinaryMask3DMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkDynamicMeshTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOFactoryTest01.cxx.o -c /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOFactoryTest01.cxx In file included from /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOFactoryTest01.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkJPEG2000ImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest00.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSpatialObjectPointPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSpatialObjectPoint.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Generating itkContourSpatialObjectPointPython.cpp, ../../../lib/itkContourSpatialObjectPointPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest00.cxx.o -c /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest00.cxx In file included from /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest00.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkJPEG2000ImageIO.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkStreamingImageIOBase.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest01.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkDynamicMeshTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkDynamicMeshTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkDynamicMeshTest.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkExtractMeshConnectedRegionsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIORegionOfInterest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIORegionOfInterest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIORegionOfInterest.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkJPEG2000ImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest02.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest01.cxx.o -c /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest01.cxx In file included from /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest01.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkJPEG2000ImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest03.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkExtractMeshConnectedRegionsTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkExtractMeshConnectedRegionsTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkExtractMeshConnectedRegionsTest.cxx:20: In file included from /<>/Modules/Core/Mesh/include/itkSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkMeshFstreamTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkMeshFstreamTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkMeshFstreamTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkMeshFstreamTest.cxx:20: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkMeshSourceGraftOutputTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkContourSpatialObjectPointPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkContourSpatialObjectPoint.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Generating itkDTITubeSpatialObjectPointPython.cpp, ../../../lib/itkDTITubeSpatialObjectPointPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest02.cxx.o -c /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest02.cxx In file included from /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest02.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkJPEG2000ImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest04.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest03.cxx.o -c /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest03.cxx In file included from /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest03.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkJPEG2000ImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest05.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkMeshSourceGraftOutputTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkMeshSourceGraftOutputTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkMeshSourceGraftOutputTest.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkTransformMeshFilter.h:22: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkMeshSpatialObjectIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest04.cxx.o -c /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest04.cxx In file included from /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest04.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkJPEG2000ImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest06.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkDTITubeSpatialObjectPointPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDTITubeSpatialObjectPoint.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Generating itkVesselTubeSpatialObjectPointPython.cpp, ../../../lib/itkVesselTubeSpatialObjectPointPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest05.cxx.o -c /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest05.cxx In file included from /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest05.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkLabelGeometryImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest06.cxx.o -c /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest06.cxx In file included from /<>/Modules/Nonunit/Review/test/itkJPEG2000ImageIOTest06.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkJPEG2000ImageIOFactory.h:22: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkMapMaskedRankImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkVesselTubeSpatialObjectPointPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVesselTubeSpatialObjectPoint.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Generating itkPointBasedSpatialObjectPython.cpp, ../../../lib/itkPointBasedSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkMapMaskedRankImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkMapMaskedRankImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkMapMaskedRankImageFilterTest.cxx:20: In file included from /<>/Modules/Nonunit/Review/include/itkMaskedRankImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMaskedMovingHistogramImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkMovingHistogramImageFilterBase.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkMapRankImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkMeshSpatialObjectIOTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkMeshSpatialObjectIOTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkMeshSpatialObjectIOTest.cxx:19: In file included from /<>/Modules/IO/SpatialObjects/include/itkSpatialObjectWriter.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaSceneConverter.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSceneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToSimplexMeshFilter2Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkMapRankImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkMapRankImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkMapRankImageFilterTest.cxx:20: In file included from /<>/Modules/Nonunit/Review/include/itkRankImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkMovingHistogramImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkMovingHistogramImageFilterBase.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkMaskedRankImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkPointBasedSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPointBasedSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Generating itkImageSpatialObjectPython.cpp, ../../../lib/itkImageSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToSimplexMeshFilter2Test.cxx.o -c /<>/Modules/Core/Mesh/test/itkTriangleMeshToSimplexMeshFilter2Test.cxx In file included from /<>/Modules/Core/Mesh/test/itkTriangleMeshToSimplexMeshFilter2Test.cxx:21: In file included from /<>/Modules/Core/Mesh/include/itkRegularSphereMeshSource.h:22: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkCellInterfaceTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkLabelGeometryImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkLabelGeometryImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkLabelGeometryImageFilterTest.cxx:18: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkMultiphaseDenseFiniteDifferenceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkCellInterfaceTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkCellInterfaceTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkCellInterfaceTest.cxx:21: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkNewTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkNewTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkNewTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkNewTest.cxx:20: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkQuadrilateralCellTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkMaskedRankImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkMaskedRankImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkMaskedRankImageFilterTest.cxx:20: In file included from /<>/Modules/Nonunit/Review/include/itkMaskedRankImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMaskedMovingHistogramImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkMovingHistogramImageFilterBase.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkMultiphaseFiniteDifferenceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkQuadrilateralCellTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkQuadrilateralCellTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkQuadrilateralCellTest.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Core/Mesh/test/CMakeFiles/ITKMeshTestDriver.dir/itkTriangleCellTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkMultiphaseDenseFiniteDifferenceImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkMultiphaseDenseFiniteDifferenceImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkMultiphaseDenseFiniteDifferenceImageFilterTest.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Registration/FEM/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkFEMRegistrationFilter2DTest.cxx.o -c /<>/Modules/Registration/FEM/test/itkFEMRegistrationFilter2DTest.cxx In file included from /<>/Modules/Registration/FEM/test/itkFEMRegistrationFilter2DTest.cxx:19: In file included from /<>/Modules/Registration/FEM/include/itkFEMRegistrationFilter.h:25: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolverCrankNicolson.h:22: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Registration/FEM/test/CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkMIRegistrationFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DMembraneTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement3DMembraneTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DStrainTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DQuadraticTriangularTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkMultiphaseFiniteDifferenceImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkMultiphaseFiniteDifferenceImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkMultiphaseFiniteDifferenceImageFilterTest.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkMultiphaseSparseFiniteDifferenceImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DStrainTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DStrainTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMLinearSystemWrapperItpackTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DQuadraticTriangularTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DQuadraticTriangularTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMLinearSystemWrapperItpackTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleCellTest.cxx.o -c /<>/Modules/Core/Mesh/test/itkTriangleCellTest.cxx In file included from /<>/Modules/Core/Mesh/test/itkTriangleCellTest.cxx:19: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Linking CXX executable ../../../../bin/ITKMeshTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLinearSystemWrapperItpackTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMLinearSystemWrapperItpackTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMLinearSystemWrapperVNLTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLinearSystemWrapperItpackTest2.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMLinearSystemWrapperItpackTest2.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 84%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMLinearSystemWrapperDenseVNLTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Core/Mesh/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMeshTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKMeshTestDriver.dir/ITKMeshTestDriver.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkAutomaticTopologyMeshSourceTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkImageToParametricSpaceFilterTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkInteriorExteriorMeshFilterTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkParametricSpaceToImageSpaceMeshFilterTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkRegularSphereMeshSourceTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkRegularSphereMeshSourceTest2.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkSimplexMeshTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkSimplexMeshAdaptTopologyFilterTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkSimplexMeshToTriangleMeshFilterTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkSimplexMeshVolumeCalculatorTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkSphereMeshSourceTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkTransformMeshFilterTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest1.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest2.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest3.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToBinaryImageFilterTest4.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToSimplexMeshFilterTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkVTKPolyDataReaderTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkVTKPolyDataWriterTest01.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkVTKPolyDataWriterTest02.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkWarpMeshFilterTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkMeshTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkBinaryMask3DMeshSourceTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkDynamicMeshTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkExtractMeshConnectedRegionsTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkMeshFstreamTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkMeshSourceGraftOutputTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkMeshSpatialObjectIOTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleMeshToSimplexMeshFilter2Test.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkCellInterfaceTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkNewTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkQuadrilateralCellTest.cxx.o CMakeFiles/ITKMeshTestDriver.dir/itkTriangleCellTest.cxx.o -o ../../../../bin/ITKMeshTestDriver ../../../../lib/libITKIOMesh-4.12.so.1 ../../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 84%] Built target ITKMeshTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsSwig.dir/build.make Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageStatistics/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageStatistics /<>/BUILD/Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageStatisticsSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsSwig.dir/build.make Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 84%] Generating ../../Typedefs/itkAccumulateImageFilter.i, ../../Typedefs/itkAdaptiveHistogramEqualizationImageFilter.i, ../../Typedefs/itkBinaryProjectionImageFilter.i, ../../Typedefs/itkImageMomentsCalculator.i, ../../Typedefs/itkImagePCAShapeModelEstimator.i, ../../Typedefs/itkImageShapeModelEstimatorBase.i, ../../Typedefs/itkLabelStatisticsImageFilter.i, ../../Typedefs/itkMaximumProjectionImageFilter.i, ../../Typedefs/itkMeanProjectionImageFilter.i, ../../Typedefs/itkMedianProjectionImageFilter.i, ../../Typedefs/itkMinimumMaximumImageFilter.i, ../../Typedefs/itkMinimumProjectionImageFilter.i, ../../Typedefs/itkStandardDeviationProjectionImageFilter.i, ../../Typedefs/itkStatisticsImageFilter.i, ../../Typedefs/itkSumProjectionImageFilter.i, ../../Typedefs/itkAccumulateImageFilterSwigInterface.h, ../../Typedefs/itkAdaptiveHistogramEqualizationImageFilterSwigInterface.h, ../../Typedefs/itkBinaryProjectionImageFilterSwigInterface.h, ../../Typedefs/itkImageMomentsCalculatorSwigInterface.h, ../../Typedefs/itkImagePCAShapeModelEstimatorSwigInterface.h, ../../Typedefs/itkImageShapeModelEstimatorBaseSwigInterface.h, ../../Typedefs/itkLabelStatisticsImageFilterSwigInterface.h, ../../Typedefs/itkMaximumProjectionImageFilterSwigInterface.h, ../../Typedefs/itkMeanProjectionImageFilterSwigInterface.h, ../../Typedefs/itkMedianProjectionImageFilterSwigInterface.h, ../../Typedefs/itkMinimumMaximumImageFilterSwigInterface.h, ../../Typedefs/itkMinimumProjectionImageFilterSwigInterface.h, ../../Typedefs/itkStandardDeviationProjectionImageFilterSwigInterface.h, ../../Typedefs/itkStatisticsImageFilterSwigInterface.h, ../../Typedefs/itkSumProjectionImageFilterSwigInterface.h, ../../Typedefs/itkAccumulateImageFilter.idx, ../../Typedefs/itkAdaptiveHistogramEqualizationImageFilter.idx, ../../Typedefs/itkBinaryProjectionImageFilter.idx, ../../Typedefs/itkImageMomentsCalculator.idx, ../../Typedefs/itkImagePCAShapeModelEstimator.idx, ../../Typedefs/itkImageShapeModelEstimatorBase.idx, ../../Typedefs/itkLabelStatisticsImageFilter.idx, ../../Typedefs/itkMaximumProjectionImageFilter.idx, ../../Typedefs/itkMeanProjectionImageFilter.idx, ../../Typedefs/itkMedianProjectionImageFilter.idx, ../../Typedefs/itkMinimumMaximumImageFilter.idx, ../../Typedefs/itkMinimumProjectionImageFilter.idx, ../../Typedefs/itkStandardDeviationProjectionImageFilter.idx, ../../Typedefs/itkStatisticsImageFilter.idx, ../../Typedefs/itkSumProjectionImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLinearSystemWrapperVNLTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMLinearSystemWrapperVNLTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMPArrayTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLinearSystemWrapperDenseVNLTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMLinearSystemWrapperDenseVNLTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearTriangleStressTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMPArrayTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMPArrayTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearQuadrilateralStrainItpackTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Registration/FEM/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkMIRegistrationFunctionTest.cxx.o -c /<>/Modules/Registration/FEM/test/itkMIRegistrationFunctionTest.cxx In file included from /<>/Modules/Registration/FEM/test/itkMIRegistrationFunctionTest.cxx:19: In file included from /<>/Modules/Registration/FEM/include/itkMIRegistrationFunction.h:21: In file included from /<>/Modules/Registration/Common/include/itkPDEDeformableRegistrationFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Registration/FEM/test/CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkFEMRegistrationFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkMultiphaseSparseFiniteDifferenceImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkMultiphaseSparseFiniteDifferenceImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkMultiphaseSparseFiniteDifferenceImageFilterTest.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseSparseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkMultiScaleHessianBasedMeasureImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkMultiScaleHessianBasedMeasureImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkMultiScaleHessianBasedMeasureImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkMultiScaleHessianBasedMeasureImageFilterTest.cxx:19: In file included from /<>/Modules/Filtering/ImageFeature/include/itkHessianToObjectnessMeasureImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkNeuralNetworkIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Registration/FEM/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkFEMRegistrationFilterTest2.cxx.o -c /<>/Modules/Registration/FEM/test/itkFEMRegistrationFilterTest2.cxx In file included from /<>/Modules/Registration/FEM/test/itkFEMRegistrationFilterTest2.cxx:19: In file included from /<>/Modules/Registration/FEM/include/itkFEMRegistrationFilter.h:25: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolverCrankNicolson.h:22: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Registration/FEM/test/CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkPhysicsBasedNonRigidRegistrationMethodTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearTriangleStressTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearTriangleStressTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearTriangleStressTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearTriangleStrainTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkNeuralNetworkIOTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkNeuralNetworkIOTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkNeuralNetworkIOTest.cxx:22: In file included from /<>/Modules/Numerics/Statistics/include/itkListSample.h:23: In file included from /<>/Modules/Numerics/Statistics/include/itkSample.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkOptImageToImageMetricsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkImageSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkBlobSpatialObjectPython.cpp, ../../../lib/itkBlobSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearQuadrilateralStrainItpackTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearQuadrilateralStrainItpackTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearQuadrilateralStrainItpackTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearTriangleMembraneTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageStatistics.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageCompose.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFilterBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKSpatialObjects.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKTransform.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkAccumulateImageFilter;itkAdaptiveHistogramEqualizationImageFilter;itkBinaryProjectionImageFilter;itkImageMomentsCalculator;itkImagePCAShapeModelEstimator;itkImageShapeModelEstimatorBase;itkLabelStatisticsImageFilter;itkMaximumProjectionImageFilter;itkMeanProjectionImageFilter;itkMedianProjectionImageFilter;itkMinimumMaximumImageFilter;itkMinimumProjectionImageFilter;itkStandardDeviationProjectionImageFilter;itkStatisticsImageFilter;itkSumProjectionImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKImageStatisticsSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/build.make Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkQuadEdgePython.cpp, ../../../lib/itkQuadEdgePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkQuadEdge.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkGeometricalQuadEdgePython.cpp, ../../../lib/itkGeometricalQuadEdgePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkGeometricalQuadEdgePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGeometricalQuadEdge.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkQuadEdgeMeshPointPython.cpp, ../../../lib/itkQuadEdgeMeshPointPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkPadImageFilterBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPadImageFilterBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkPadImageFilterPython.cpp, ../../../lib/itkPadImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkOptImageToImageMetricsTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkOptImageToImageMetricsTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkOptImageToImageMetricsTest.cxx:18: In file included from /<>/Modules/Core/Transform/include/itkTranslationTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkTransformBase.h:24: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkOptImageToImageMetricsTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgeMeshPointPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkQuadEdgeMeshPoint.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkQuadEdgeMeshTraitsPython.cpp, ../../../lib/itkQuadEdgeMeshTraitsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgeMeshTraitsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkQuadEdgeMeshTraits.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkQuadEdgeCellTraitsInfoPython.cpp, ../../../lib/itkQuadEdgeCellTraitsInfoPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkBlobSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBlobSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkPolygonSpatialObjectPython.cpp, ../../../lib/itkPolygonSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Registration/FEM/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkPhysicsBasedNonRigidRegistrationMethodTest.cxx.o -c /<>/Modules/Registration/FEM/test/itkPhysicsBasedNonRigidRegistrationMethodTest.cxx In file included from /<>/Modules/Registration/FEM/test/itkPhysicsBasedNonRigidRegistrationMethodTest.cxx:19: In file included from /<>/Modules/Registration/FEM/test/itkVTKTetrahedralMeshReader.h:21: In file included from /<>/Modules/Core/Mesh/include/itkMesh.h:32: In file included from /<>/Modules/Core/Common/include/itkPointSet.h:32: In file included from /<>/Modules/Core/Common/include/itkDefaultStaticMeshTraits.h:23: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Linking CXX executable ../../../../bin/ITKFEMRegistrationTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Registration/FEM/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFEMRegistrationTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKFEMRegistrationTestDriver.dir/ITKFEMRegistrationTestDriver.cxx.o CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkFEMFiniteDifferenceFunctionLoadTest.cxx.o CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkFEMRegistrationFilterTest.cxx.o CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkFEMRegistrationFilter2DTest.cxx.o CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkMIRegistrationFunctionTest.cxx.o CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkFEMRegistrationFilterTest2.cxx.o CMakeFiles/ITKFEMRegistrationTestDriver.dir/itkPhysicsBasedNonRigidRegistrationMethodTest.cxx.o -o ../../../../bin/ITKFEMRegistrationTestDriver ../../../../lib/libITKFEM-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKFEMRegistrationTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/build.make Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkComplexToComplexFFTImageFilterPython.cpp, ../../../lib/itkComplexToComplexFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearTriangleStrainTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearTriangleStrainTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearTriangleStrainTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearQuadrilateralStressTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgeCellTraitsInfoPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkQuadEdgeCellTraitsInfo.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkQuadEdgeMeshLineCellPython.cpp, ../../../lib/itkQuadEdgeMeshLineCellPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearTriangleMembraneTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearTriangleMembraneTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearTriangleMembraneTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearQuadrilateralStrainTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkOptImageToImageMetricsTest2.cxx.o -c /<>/Modules/Nonunit/Review/test/itkOptImageToImageMetricsTest2.cxx In file included from /<>/Modules/Nonunit/Review/test/itkOptImageToImageMetricsTest2.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkOptMattesMutualInformationImageToImageMetricThreadsTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgeMeshLineCellPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkQuadEdgeMeshLineCell.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkQuadEdgeMeshBasePython.cpp, ../../../lib/itkQuadEdgeMeshBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkPolygonSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPolygonSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkArrowSpatialObjectPython.cpp, ../../../lib/itkArrowSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkOptMattesMutualInformationImageToImageMetricThreadsTest1.cxx.o -c /<>/Modules/Nonunit/Review/test/itkOptMattesMutualInformationImageToImageMetricThreadsTest1.cxx In file included from /<>/Modules/Nonunit/Review/test/itkOptMattesMutualInformationImageToImageMetricThreadsTest1.cxx:18: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkRankImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearQuadrilateralStressTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearQuadrilateralStressTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearQuadrilateralStressTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearQuadrilateralMembraneTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearQuadrilateralStrainTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearQuadrilateralStrainTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearQuadrilateralStrainTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0QuadraticTriangleStrainTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkRankImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkRankImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkRankImageFilterTest.cxx:20: In file included from /<>/Modules/Nonunit/Review/include/itkRankImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkMovingHistogramImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkMovingHistogramImageFilterBase.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkKernelImageFilter.h:21: In file included from /<>/Modules/Filtering/ImageFilterBase/include/itkBoxImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkRegionBasedLevelSetFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkArrowSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkArrowSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkBoxSpatialObjectPython.cpp, ../../../lib/itkBoxSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkRegionBasedLevelSetFunctionTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkRegionBasedLevelSetFunctionTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkRegionBasedLevelSetFunctionTest.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkRegionBasedLevelSetFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkRobustAutomaticThresholdCalculatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgeMeshBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkQuadEdgeMeshBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkQuadEdgeMeshToQuadEdgeMeshFilterPython.cpp, ../../../lib/itkQuadEdgeMeshToQuadEdgeMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkRobustAutomaticThresholdCalculatorTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkRobustAutomaticThresholdCalculatorTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkRobustAutomaticThresholdCalculatorTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkRobustAutomaticThresholdImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkBoxSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBoxSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkContourSpatialObjectPython.cpp, ../../../lib/itkContourSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearQuadrilateralMembraneTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearQuadrilateralMembraneTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearQuadrilateralMembraneTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseDenseLevelSetImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkRobustAutomaticThresholdImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkRobustAutomaticThresholdImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkRobustAutomaticThresholdImageFilterTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseDenseLevelSetImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0QuadraticTriangleStrainTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0QuadraticTriangleStrainTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0QuadraticTriangleStrainTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0QuadraticTriangleStressTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgeMeshToQuadEdgeMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkQuadEdgeMeshToQuadEdgeMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating ITKQuadEdgeMeshPython.cpp, ../../../lib/ITKQuadEdgeMeshPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/ITKQuadEdgeMeshPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKQuadEdgeMesh.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/QuadEdgeMesh/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMeshPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/build.make Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/ITKQuadEdgeMeshPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/c++ -DITKQuadEdgeMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/QuadEdgeMesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshPython.dir/ITKQuadEdgeMeshPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/ITKQuadEdgeMeshPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/c++ -DITKQuadEdgeMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/QuadEdgeMesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/itkGeometricalQuadEdgePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseDenseLevelSetImageFilterTest1.cxx.o -c /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseDenseLevelSetImageFilterTest1.cxx In file included from /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseDenseLevelSetImageFilterTest1.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkScalarChanAndVeseDenseLevelSetImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseDenseLevelSetImageFilterTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/c++ -DITKQuadEdgeMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/QuadEdgeMesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkGeometricalQuadEdgePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkGeometricalQuadEdgePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshPointPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/c++ -DITKQuadEdgeMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/QuadEdgeMesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshPointPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgeMeshPointPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshTraitsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseDenseLevelSetImageFilterTest2.cxx.o -c /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseDenseLevelSetImageFilterTest2.cxx In file included from /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseDenseLevelSetImageFilterTest2.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkScalarChanAndVeseDenseLevelSetImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseDenseLevelSetImageFilterTest4.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/c++ -DITKQuadEdgeMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/QuadEdgeMesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshTraitsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgeMeshTraitsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeCellTraitsInfoPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkContourSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkContourSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkDTITubeSpatialObjectPython.cpp, ../../../lib/itkDTITubeSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTestKernel/itkPipelineMonitorImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPipelineMonitorImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkRandomImageSourcePython.cpp, ../../../lib/itkRandomImageSourcePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/c++ -DITKQuadEdgeMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/QuadEdgeMesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeCellTraitsInfoPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgeCellTraitsInfoPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshLineCellPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseDenseLevelSetImageFilterTest3.cxx.o -c /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseDenseLevelSetImageFilterTest3.cxx In file included from /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseDenseLevelSetImageFilterTest3.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkScalarChanAndVeseDenseLevelSetImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseLevelSetFunctionTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseLevelSetFunctionTest1.cxx.o -c /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseLevelSetFunctionTest1.cxx In file included from /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseLevelSetFunctionTest1.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkScalarChanAndVeseLevelSetFunction.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkScalarRegionBasedLevelSetFunction.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkRegionBasedLevelSetFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseLevelSetFunctionTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0QuadraticTriangleStressTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0QuadraticTriangleStressTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0QuadraticTriangleStressTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearLineStressTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseLevelSetFunctionTest2.cxx.o -c /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseLevelSetFunctionTest2.cxx In file included from /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseLevelSetFunctionTest2.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkScalarChanAndVeseLevelSetFunction.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkScalarRegionBasedLevelSetFunction.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkRegionBasedLevelSetFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseSparseLevelSetImageFilterTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseDenseLevelSetImageFilterTest4.cxx.o -c /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseDenseLevelSetImageFilterTest4.cxx In file included from /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseDenseLevelSetImageFilterTest4.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkScalarChanAndVeseDenseLevelSetImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseDenseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseSparseLevelSetImageFilterTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkDTITubeSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDTITubeSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkEllipseSpatialObjectPython.cpp, ../../../lib/itkEllipseSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseSparseLevelSetImageFilterTest1.cxx.o -c /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseSparseLevelSetImageFilterTest1.cxx In file included from /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseSparseLevelSetImageFilterTest1.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkScalarChanAndVeseSparseLevelSetImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseSparseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkScalarRegionBasedLevelSetFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/c++ -DITKQuadEdgeMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/QuadEdgeMesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshLineCellPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgeMeshLineCellPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkScalarRegionBasedLevelSetFunctionTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkScalarRegionBasedLevelSetFunctionTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkScalarRegionBasedLevelSetFunctionTest.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkScalarRegionBasedLevelSetFunction.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkRegionBasedLevelSetFunction.h:21: In file included from /<>/Modules/Core/FiniteDifference/include/itkFiniteDifferenceFunction.h:22: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest1.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseSparseLevelSetImageFilterTest2.cxx.o -c /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseSparseLevelSetImageFilterTest2.cxx In file included from /<>/Modules/Nonunit/Review/test/itkScalarChanAndVeseSparseLevelSetImageFilterTest2.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkScalarChanAndVeseSparseLevelSetImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseSparseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Nonunit/Review/include/itkMultiphaseFiniteDifferenceImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTestKernel/itkRandomImageSourcePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRandomImageSource.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating ITKTestKernelPython.cpp, ../../../lib/ITKTestKernelPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKTestKernel/ITKTestKernelPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKTestKernel.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/TestKernel/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKTestKernel /<>/BUILD/Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKTestKernelPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelPython.dir/build.make Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelPython.dir/ITKTestKernelPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTestKernel && /usr/bin/c++ -DITKTestKernelPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/TestKernel/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTestKernelPython.dir/ITKTestKernelPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTestKernel/ITKTestKernelPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelPython.dir/itkComparisonImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest1.cxx.o -c /<>/Modules/Nonunit/Review/test/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest1.cxx In file included from /<>/Modules/Nonunit/Review/test/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest1.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest3.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest2.cxx.o -c /<>/Modules/Nonunit/Review/test/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest2.cxx In file included from /<>/Modules/Nonunit/Review/test/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest2.cxx:21: In file included from /<>/Modules/Core/ImageFunction/include/itkBinaryThresholdImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelPython.dir/itkPipelineMonitorImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest3.cxx.o -c /<>/Modules/Nonunit/Review/test/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest3.cxx In file included from /<>/Modules/Nonunit/Review/test/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest3.cxx:21: In file included from /<>/Modules/Core/ImageFunction/include/itkBinaryThresholdImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkStochasticFractalDimensionImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearLineStressTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearLineStressTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement2DC0LinearLineStressTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC1BeamTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkEllipseSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkEllipseSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkGaussianSpatialObjectPython.cpp, ../../../lib/itkGaussianSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkStochasticFractalDimensionImageFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkStochasticFractalDimensionImageFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkStochasticFractalDimensionImageFilterTest.cxx:18: In file included from /<>/Modules/Filtering/Thresholding/include/itkBinaryThresholdImageFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkUnaryFunctorImageFilter.h:22: In file included from /<>/Modules/Core/Common/include/itkInPlaceImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageToImageFilter.h:31: In file included from /<>/Modules/Core/Common/include/itkImageSource.h:32: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkTimeAndMemoryProbeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkTimeAndMemoryProbeTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkTimeAndMemoryProbeTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkVectorCentralDifferenceImageFunctionTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/c++ -DITKQuadEdgeMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/QuadEdgeMesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgeMeshBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMesh/CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshToQuadEdgeMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkVectorCentralDifferenceImageFunctionTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkVectorCentralDifferenceImageFunctionTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkVectorCentralDifferenceImageFunctionTest.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkVectorCentralDifferenceImageFunction.h:21: In file included from /<>/Modules/Core/ImageFunction/include/itkImageFunction.h:23: In file included from /<>/Modules/Core/Common/include/itkImageBase.h:33: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkVoxBoCUBImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkGaussianSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGaussianSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkGroupSpatialObjectPython.cpp, ../../../lib/itkGroupSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkVoxBoCUBImageIOTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkVoxBoCUBImageIOTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkVoxBoCUBImageIOTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkWarpHarmonicEnergyCalculatorTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTestKernel && /usr/bin/c++ -DITKTestKernelPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/TestKernel/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTestKernelPython.dir/itkComparisonImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTestKernel/itkComparisonImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKTestKernel/CMakeFiles/ITKTestKernelPython.dir/itkRandomImageSourcePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC1BeamTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DC1BeamTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement2DC1BeamTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DC0LinearHexahedronStrainTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkWarpHarmonicEnergyCalculatorTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkWarpHarmonicEnergyCalculatorTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkWarpHarmonicEnergyCalculatorTest.cxx:19: In file included from /<>/Modules/Nonunit/Review/include/itkWarpHarmonicEnergyCalculator.h:23: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Nonunit/Review/test/CMakeFiles/ITKReviewTestDriver.dir/itkWarpJacobianDeterminantFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkComplexToComplexFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkComplexToComplexFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkFFTPadImageFilterPython.cpp, ../../../lib/itkFFTPadImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/c++ -DITKQuadEdgeMeshPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/QuadEdgeMesh/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshToQuadEdgeMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh/itkQuadEdgeMeshToQuadEdgeMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Linking CXX shared module ../../../lib/_ITKQuadEdgeMeshPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/CSV/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/IO/Mesh/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/GIPL/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/XML/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Nonunit/Review/include -I/usr/include/double-conversion -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKReviewTestDriver.dir/itkWarpJacobianDeterminantFilterTest.cxx.o -c /<>/Modules/Nonunit/Review/test/itkWarpJacobianDeterminantFilterTest.cxx In file included from /<>/Modules/Nonunit/Review/test/itkWarpJacobianDeterminantFilterTest.cxx:19: In file included from /<>/Modules/Filtering/DisplacementField/include/itkDisplacementFieldJacobianDeterminantFilter.h:21: In file included from /<>/Modules/Core/Common/include/itkNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkConstNeighborhoodIterator.h:24: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMesh && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKQuadEdgeMeshPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKQuadEdgeMeshPython.so CMakeFiles/ITKQuadEdgeMeshPython.dir/ITKQuadEdgeMeshPython.cpp.o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgePython.cpp.o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkGeometricalQuadEdgePython.cpp.o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshPointPython.cpp.o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshTraitsPython.cpp.o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeCellTraitsInfoPython.cpp.o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshLineCellPython.cpp.o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshBasePython.cpp.o CMakeFiles/ITKQuadEdgeMeshPython.dir/itkQuadEdgeMeshToQuadEdgeMeshFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Linking CXX executable ../../../../bin/ITKReviewTestDriver make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKQuadEdgeMeshPython make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkFFTShiftImageFilterPython.cpp, ../../../lib/itkFFTShiftImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Nonunit/Review/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKReviewTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKReviewTestDriver.dir/ITKReviewTestDriver.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkAreaClosingImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkAreaOpeningImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkBruker2DSEQImageIOTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkConformalFlatteningMeshFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkConformalFlatteningQuadEdgeMeshFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkContourExtractor2DImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkDiffeomorphicDemonsRegistrationFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkDiffeomorphicDemonsRegistrationFilterTest2.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkDirectFourierReconstructionImageToImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteGaussianDerivativeImageFilterScaleSpaceTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteGaussianDerivativeImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteGaussianDerivativeImageFunctionTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteGradientMagnitudeGaussianImageFunctionTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkDiscreteHessianGaussianImageFunctionTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkFastApproximateRankImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkFastSymmetricForcesDemonsRegistrationFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkGridForwardWarpImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkImageFunctionTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOFactoryTest01.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIORegionOfInterest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest00.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest01.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest02.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest03.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest04.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest05.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkJPEG2000ImageIOTest06.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkLabelGeometryImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkMapMaskedRankImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkMapRankImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkMaskedRankImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkMultiphaseDenseFiniteDifferenceImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkMultiphaseFiniteDifferenceImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkMultiphaseSparseFiniteDifferenceImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkMultiScaleHessianBasedMeasureImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkNeuralNetworkIOTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkOptImageToImageMetricsTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkOptImageToImageMetricsTest2.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkOptMattesMutualInformationImageToImageMetricThreadsTest1.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkRankImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkRegionBasedLevelSetFunctionTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkRobustAutomaticThresholdCalculatorTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkRobustAutomaticThresholdImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseDenseLevelSetImageFilterTest1.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseDenseLevelSetImageFilterTest2.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseDenseLevelSetImageFilterTest3.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseDenseLevelSetImageFilterTest4.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseLevelSetFunctionTest1.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseLevelSetFunctionTest2.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseSparseLevelSetImageFilterTest1.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkScalarChanAndVeseSparseLevelSetImageFilterTest2.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkScalarRegionBasedLevelSetFunctionTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest1.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest2.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkShapedFloodFilledImageFunctionConditionalConstIteratorTest3.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkStochasticFractalDimensionImageFilterTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkTimeAndMemoryProbeTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkVectorCentralDifferenceImageFunctionTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkVoxBoCUBImageIOTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkWarpHarmonicEnergyCalculatorTest.cxx.o CMakeFiles/ITKReviewTestDriver.dir/itkWarpJacobianDeterminantFilterTest.cxx.o -o ../../../../bin/ITKReviewTestDriver ../../../../lib/libITKIOCSV-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOMesh-4.12.so.1 ../../../../lib/libITKReview-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKLabelMap-4.12.so.1 ../../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../../lib/libITKBiasCorrection-4.12.so.1 ../../../../lib/libITKBioCell-4.12.so.1 ../../../../lib/libITKFEM-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 ../../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOGE-4.12.so.1 ../../../../lib/libITKIOSiemens-4.12.so.1 ../../../../lib/libITKIOIPL-4.12.so.1 ../../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../../lib/libITKIOTransformBase-4.12.so.1 ../../../../lib/libITKTransformFactory-4.12.so.1 ../../../../lib/libITKIOXML-4.12.so.1 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../../lib/libITKPolynomials-4.12.so.1 ../../../../lib/libITKVTK-4.12.so.1 ../../../../lib/libITKWatersheds-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lpthread -lm -ldl ../../../../lib/libitkopenjpeg-4.12.so.1 -lm -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKReviewTestDriver make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkFFTWComplexToComplexFFTImageFilterPython.cpp, ../../../lib/itkFFTWComplexToComplexFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkGroupSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGroupSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkImageMaskSpatialObjectPython.cpp, ../../../lib/itkImageMaskSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTestKernel && /usr/bin/c++ -DITKTestKernelPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/TestKernel/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTestKernelPython.dir/itkRandomImageSourcePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTestKernel/itkRandomImageSourcePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkLandmarkSpatialObjectPython.cpp, ../../../lib/itkLandmarkSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DC0LinearHexahedronStrainTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement3DC0LinearHexahedronStrainTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement3DC0LinearHexahedronStrainTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DC0LinearHexahedronMembraneTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkLandmarkSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLandmarkSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkLineSpatialObjectPython.cpp, ../../../lib/itkLineSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DC0LinearHexahedronMembraneTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement3DC0LinearHexahedronMembraneTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement3DC0LinearHexahedronMembraneTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DC0LinearTetrahedronStrainTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkImageMaskSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageMaskSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkLineSpatialObjectPointPython.cpp, ../../../lib/itkLineSpatialObjectPointPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkLineSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLineSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkMetaConverterBasePython.cpp, ../../../lib/itkMetaConverterBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkLineSpatialObjectPointPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLineSpatialObjectPoint.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkPlaneSpatialObjectPython.cpp, ../../../lib/itkPlaneSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkMetaConverterBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMetaConverterBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkPolygonGroupSpatialObjectPython.cpp, ../../../lib/itkPolygonGroupSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DC0LinearTetrahedronStrainTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement3DC0LinearTetrahedronStrainTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement3DC0LinearTetrahedronStrainTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DC0LinearTetrahedronMembraneTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkPlaneSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPlaneSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkSceneSpatialObjectPython.cpp, ../../../lib/itkSceneSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTestKernel && /usr/bin/c++ -DITKTestKernelPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/TestKernel/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKTestKernelPython.dir/itkPipelineMonitorImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKTestKernel/itkPipelineMonitorImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Linking CXX shared module ../../../lib/_ITKTestKernelPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKTestKernel && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKTestKernelPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKTestKernelPython.so CMakeFiles/ITKTestKernelPython.dir/ITKTestKernelPython.cpp.o CMakeFiles/ITKTestKernelPython.dir/itkComparisonImageFilterPython.cpp.o CMakeFiles/ITKTestKernelPython.dir/itkPipelineMonitorImageFilterPython.cpp.o CMakeFiles/ITKTestKernelPython.dir/itkRandomImageSourcePython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKTestKernelPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsPython.dir/build.make Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkSpatialObjectReaderPython.cpp, ../../../lib/itkSpatialObjectReaderPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkPolygonGroupSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPolygonGroupSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkSpatialObjectToImageFilterPython.cpp, ../../../lib/itkSpatialObjectToImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSceneSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSceneSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkSurfaceSpatialObjectPython.cpp, ../../../lib/itkSurfaceSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DC0LinearTetrahedronMembraneTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement3DC0LinearTetrahedronMembraneTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement3DC0LinearTetrahedronMembraneTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadBCMFCTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkPadImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPadImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkBSplineDownsampleImageFilterPython.cpp, ../../../lib/itkBSplineDownsampleImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects/itkSpatialObjectReaderPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSpatialObjectReader.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkSpatialObjectWriterPython.cpp, ../../../lib/itkSpatialObjectWriterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSurfaceSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSurfaceSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkSurfaceSpatialObjectPointPython.cpp, ../../../lib/itkSurfaceSpatialObjectPointPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSurfaceSpatialObjectPointPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSurfaceSpatialObjectPoint.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkTubeSpatialObjectPointPython.cpp, ../../../lib/itkTubeSpatialObjectPointPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadBCMFCTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMLoadBCMFCTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMLoadBCMFCTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadBCMFCTestUser.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects/itkSpatialObjectWriterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSpatialObjectWriter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating ITKIOSpatialObjectsPython.cpp, ../../../lib/ITKIOSpatialObjectsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects/ITKIOSpatialObjectsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOSpatialObjects.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/SpatialObjects/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOSpatialObjectsPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsPython.dir/build.make Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsPython.dir/ITKIOSpatialObjectsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects && /usr/bin/c++ -DITKIOSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOSpatialObjectsPython.dir/ITKIOSpatialObjectsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects/ITKIOSpatialObjectsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsPython.dir/itkSpatialObjectReaderPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadBCMFCTestUser.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMLoadBCMFCTestUser.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMLoadBCMFCTestUser.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadEdgeTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkTubeSpatialObjectPointPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTubeSpatialObjectPoint.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkVesselTubeSpatialObjectPython.cpp, ../../../lib/itkVesselTubeSpatialObjectPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSpatialObjectToImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSpatialObjectToImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadGravConstTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTWComplexToComplexFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFFTWComplexToComplexFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkFFTWForwardFFTImageFilterPython.cpp, ../../../lib/itkFFTWForwardFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkVesselTubeSpatialObjectPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVesselTubeSpatialObject.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating ITKSpatialObjectsPython.cpp, ../../../lib/ITKSpatialObjectsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/ITKSpatialObjectsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKSpatialObjects.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/SpatialObjects/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKSpatialObjects /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKSpatialObjectsPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/build.make Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/ITKSpatialObjectsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/ITKSpatialObjectsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/ITKSpatialObjectsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkSpatialObjectPropertyPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadEdgeTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMLoadEdgeTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMLoadEdgeTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadPointTestUser.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkSpatialObjectPropertyPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSpatialObjectPropertyPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkAffineGeometryFramePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadPointTestUser.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMLoadPointTestUser.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMLoadPointTestUser.cxx:27: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMLandmarkLoadImplementationTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadGravConstTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMLoadGravConstTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMLoadGravConstTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMSolverTest3D.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkBSplineDownsampleImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBSplineDownsampleImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkBSplineUpsampleImageFilterPython.cpp, ../../../lib/itkBSplineUpsampleImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkAffineGeometryFramePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkAffineGeometryFramePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkSpatialObjectBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects && /usr/bin/c++ -DITKIOSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOSpatialObjectsPython.dir/itkSpatialObjectReaderPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects/itkSpatialObjectReaderPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKIOSpatialObjects/CMakeFiles/ITKIOSpatialObjectsPython.dir/itkSpatialObjectWriterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLandmarkLoadImplementationTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMLandmarkLoadImplementationTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMLandmarkLoadImplementationTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkImageToRectilinearFEMObjectFilter2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMSolverTest3D.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMSolverTest3D.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMSolverTest3D.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkImageToRectilinearFEMObjectFilter3DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkImageToRectilinearFEMObjectFilter2DTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkImageToRectilinearFEMObjectFilter2DTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkImageToRectilinearFEMObjectFilter2DTest.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkSpatialObjectBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSpatialObjectBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkSpatialObjectPointPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkImageToRectilinearFEMObjectFilter3DTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkImageToRectilinearFEMObjectFilter3DTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkImageToRectilinearFEMObjectFilter3DTest.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkSpatialObjectPointPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSpatialObjectPointPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkContourSpatialObjectPointPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkContourSpatialObjectPointPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkContourSpatialObjectPointPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkDTITubeSpatialObjectPointPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkDTITubeSpatialObjectPointPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkDTITubeSpatialObjectPointPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkVesselTubeSpatialObjectPointPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkVesselTubeSpatialObjectPointPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkVesselTubeSpatialObjectPointPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkPointBasedSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement2DTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement2DTest.cxx:19: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMElement3DTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMElement3DTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMObjectTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkBSplineUpsampleImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBSplineUpsampleImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkBinShrinkImageFilterPython.cpp, ../../../lib/itkBinShrinkImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMObjectTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMObjectTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMObjectTest.cxx:21: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSpatialObjectWriter.h:21: In file included from /<>/Modules/IO/SpatialObjects/include/itkSpatialObjectWriter.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaSceneConverter.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSceneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMSpatialObjectTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMObjectTest2.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMObjectTest2.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMObjectTest2.cxx:21: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSpatialObjectWriter.h:21: In file included from /<>/Modules/IO/SpatialObjects/include/itkSpatialObjectWriter.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaSceneConverter.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSceneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMSolverHyperbolicTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTShiftImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFFTShiftImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkFFTWGlobalConfigurationPython.cpp, ../../../lib/itkFFTWGlobalConfigurationPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTWGlobalConfigurationPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFFTWGlobalConfiguration.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkFFTWHalfHermitianToRealInverseFFTImageFilterPython.cpp, ../../../lib/itkFFTWHalfHermitianToRealInverseFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkPointBasedSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkPointBasedSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkImageSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects && /usr/bin/c++ -DITKIOSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOSpatialObjectsPython.dir/itkSpatialObjectWriterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects/itkSpatialObjectWriterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Linking CXX shared module ../../../lib/_ITKIOSpatialObjectsPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOSpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOSpatialObjectsPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOSpatialObjectsPython.so CMakeFiles/ITKIOSpatialObjectsPython.dir/ITKIOSpatialObjectsPython.cpp.o CMakeFiles/ITKIOSpatialObjectsPython.dir/itkSpatialObjectReaderPython.cpp.o CMakeFiles/ITKIOSpatialObjectsPython.dir/itkSpatialObjectWriterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKIOSpatialObjectsPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/build.make Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkBorderQuadEdgeMeshFilterPython.cpp, ../../../lib/itkBorderQuadEdgeMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTPadImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFFTPadImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkFFTWInverseFFTImageFilterPython.cpp, ../../../lib/itkFFTWInverseFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMSpatialObjectTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMSpatialObjectTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMSpatialObjectTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSpatialObjectReader.h:21: In file included from /<>/Modules/IO/SpatialObjects/include/itkSpatialObjectReader.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkMetaSceneConverter.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkSceneSpatialObject.h:21: In file included from /<>/Modules/Core/SpatialObjects/include/itkSpatialObject.h:23: In file included from /<>/Modules/Core/SpatialObjects/include/itkAffineGeometryFrame.h:23: In file included from /<>/Modules/Core/Transform/include/itkScalableAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkAffineTransform.h:21: In file included from /<>/Modules/Core/Transform/include/itkMatrixOffsetTransformBase.h:23: In file included from /<>/Modules/Core/Common/include/itkMatrix.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMRobustSolverTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMSolverHyperbolicTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMSolverHyperbolicTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMSolverHyperbolicTest.cxx:18: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolverHyperbolic.h:21: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Numerics/FEM/test/CMakeFiles/ITKFEMTestDriver.dir/itkFEMScatteredDataPointSetToImageFilterTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMRobustSolverTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMRobustSolverTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMRobustSolverTest.cxx:20: In file included from /<>/Modules/Numerics/FEM/include/itkFEMRobustSolver.h:22: In file included from /<>/Modules/Numerics/FEM/include/itkFEMSolver.h:28: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkFFTWRealToHalfHermitianForwardFFTImageFilterPython.cpp, ../../../lib/itkFFTWRealToHalfHermitianForwardFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkBorderQuadEdgeMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBorderQuadEdgeMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkCleanQuadEdgeMeshFilterPython.cpp, ../../../lib/itkCleanQuadEdgeMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/Numerics/FEM/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/ITKFEMTestDriver.dir/itkFEMScatteredDataPointSetToImageFilterTest.cxx.o -c /<>/Modules/Numerics/FEM/test/itkFEMScatteredDataPointSetToImageFilterTest.cxx In file included from /<>/Modules/Numerics/FEM/test/itkFEMScatteredDataPointSetToImageFilterTest.cxx:18: In file included from /<>/Modules/Core/Common/include/itkImage.h:21: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Linking CXX executable ../../../../bin/ITKFEMTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkImageSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkImageSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkBlobSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Numerics/FEM/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFEMTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/ITKFEMTestDriver.dir/ITKFEMTestDriver.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMExceptionTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DMembraneTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DMembraneTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DStrainTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DQuadraticTriangularTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLinearSystemWrapperItpackTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLinearSystemWrapperItpackTest2.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLinearSystemWrapperVNLTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLinearSystemWrapperDenseVNLTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMPArrayTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearTriangleStressTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearQuadrilateralStrainItpackTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearTriangleStrainTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearTriangleMembraneTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearQuadrilateralStressTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearQuadrilateralStrainTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearQuadrilateralMembraneTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0QuadraticTriangleStrainTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0QuadraticTriangleStressTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC0LinearLineStressTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DC1BeamTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DC0LinearHexahedronStrainTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DC0LinearHexahedronMembraneTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DC0LinearTetrahedronStrainTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DC0LinearTetrahedronMembraneTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadBCMFCTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadBCMFCTestUser.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadEdgeTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadGravConstTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLoadPointTestUser.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMLandmarkLoadImplementationTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMSolverTest3D.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkImageToRectilinearFEMObjectFilter2DTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkImageToRectilinearFEMObjectFilter3DTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement2DTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMElement3DTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMObjectTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMObjectTest2.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMSpatialObjectTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMSolverHyperbolicTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMRobustSolverTest.cxx.o CMakeFiles/ITKFEMTestDriver.dir/itkFEMScatteredDataPointSetToImageFilterTest.cxx.o -o ../../../../bin/ITKFEMTestDriver ../../../../lib/libITKFEM-4.12.so.1 ../../../../lib/libITKIOSpatialObjects-4.12.so.1 -ldouble-conversion -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libitksys-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKFEMTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiPython.dir/build.make Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkVoronoiSegmentationImageFilterPython.cpp, ../../../lib/itkVoronoiSegmentationImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTWForwardFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFFTWForwardFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkForwardFFTImageFilterPython.cpp, ../../../lib/itkForwardFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkCleanQuadEdgeMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCleanQuadEdgeMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkDelaunayConformingQuadEdgeMeshFilterPython.cpp, ../../../lib/itkDelaunayConformingQuadEdgeMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkBlobSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkBlobSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkPolygonSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkPolygonSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkPolygonSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkArrowSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDelaunayConformingQuadEdgeMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDelaunayConformingQuadEdgeMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkDiscreteCurvatureQuadEdgeMeshFilterPython.cpp, ../../../lib/itkDiscreteCurvatureQuadEdgeMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkArrowSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkArrowSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkBoxSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscreteCurvatureQuadEdgeMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDiscreteCurvatureQuadEdgeMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkDiscreteCurvatureTensorQuadEdgeMeshFilterPython.cpp, ../../../lib/itkDiscreteCurvatureTensorQuadEdgeMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKVoronoi/itkVoronoiSegmentationImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVoronoiSegmentationImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating ITKVoronoiPython.cpp, ../../../lib/ITKVoronoiPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKVoronoi/ITKVoronoiPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKVoronoi.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Voronoi/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKVoronoi /<>/BUILD/Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKVoronoiPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiPython.dir/build.make Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiPython.dir/ITKVoronoiPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKVoronoi && /usr/bin/c++ -DITKVoronoiPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/Voronoi/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKVoronoiPython.dir/ITKVoronoiPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKVoronoi/ITKVoronoiPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKVoronoi/CMakeFiles/ITKVoronoiPython.dir/itkVoronoiSegmentationImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkBoxSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkBoxSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkContourSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKVoronoi && /usr/bin/c++ -DITKVoronoiPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/Voronoi/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKVoronoiPython.dir/itkVoronoiSegmentationImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKVoronoi/itkVoronoiSegmentationImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Linking CXX shared module ../../../lib/_ITKVoronoiPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKVoronoi && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKVoronoiPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKVoronoiPython.so CMakeFiles/ITKVoronoiPython.dir/ITKVoronoiPython.cpp.o CMakeFiles/ITKVoronoiPython.dir/itkVoronoiSegmentationImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKVoronoiPython make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/NIFTI/CMakeFiles/ITKIONIFTI-all.dir/build.make Modules/IO/NIFTI/CMakeFiles/ITKIONIFTI-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/NIFTI /<>/BUILD /<>/BUILD/Modules/IO/NIFTI /<>/BUILD/Modules/IO/NIFTI/CMakeFiles/ITKIONIFTI-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIONIFTI-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/NIFTI/CMakeFiles/ITKIONIFTI-all.dir/build.make Modules/IO/NIFTI/CMakeFiles/ITKIONIFTI-all.dir/build make[3]: Nothing to be done for 'Modules/IO/NIFTI/CMakeFiles/ITKIONIFTI-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKIONIFTI-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Core/Mesh/CMakeFiles/ITKMesh-all.dir/build.make Modules/Core/Mesh/CMakeFiles/ITKMesh-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Core/Mesh /<>/BUILD /<>/BUILD/Modules/Core/Mesh /<>/BUILD/Modules/Core/Mesh/CMakeFiles/ITKMesh-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMesh-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Core/Mesh/CMakeFiles/ITKMesh-all.dir/build.make Modules/Core/Mesh/CMakeFiles/ITKMesh-all.dir/build make[3]: Nothing to be done for 'Modules/Core/Mesh/CMakeFiles/ITKMesh-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKMesh-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/Deprecated/test /<>/BUILD /<>/BUILD/Modules/Compatibility/Deprecated/test /<>/BUILD/Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/DependInfo.cmake --color= Scanning dependencies of target DeprecatedIOTestDriver make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscreteCurvatureTensorQuadEdgeMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDiscreteCurvatureTensorQuadEdgeMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/DeprecatedIOTestDriver.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkDiscreteGaussianCurvatureQuadEdgeMeshFilterPython.cpp, ../../../lib/itkDiscreteGaussianCurvatureQuadEdgeMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkContourSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkContourSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkDTITubeSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkDTITubeSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkDTITubeSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkEllipseSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscreteGaussianCurvatureQuadEdgeMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDiscreteGaussianCurvatureQuadEdgeMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkDiscreteMaximumCurvatureQuadEdgeMeshFilterPython.cpp, ../../../lib/itkDiscreteMaximumCurvatureQuadEdgeMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTWHalfHermitianToRealInverseFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFFTWHalfHermitianToRealInverseFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkFullToHalfHermitianImageFilterPython.cpp, ../../../lib/itkFullToHalfHermitianImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkEllipseSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkEllipseSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkGaussianSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/DeprecatedIOTestDriver.cxx.o -c /<>/BUILD/Modules/Compatibility/Deprecated/test/DeprecatedIOTestDriver.cxx In file included from /<>/BUILD/Modules/Compatibility/Deprecated/test/DeprecatedIOTestDriver.cxx:10: In file included from /<>/Modules/Compatibility/Deprecated/test/itkTestDriverIncludeDeprecatedIOFactories.h:20: In file included from /<>/Modules/IO/BioRad/include/itkBioRadImageIOFactory.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/itkDICOMImageIO2Test.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTWInverseFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFFTWInverseFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkHalfHermitianToRealInverseFFTImageFilterPython.cpp, ../../../lib/itkHalfHermitianToRealInverseFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscreteMaximumCurvatureQuadEdgeMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDiscreteMaximumCurvatureQuadEdgeMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkDiscreteMeanCurvatureQuadEdgeMeshFilterPython.cpp, ../../../lib/itkDiscreteMeanCurvatureQuadEdgeMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/itkDICOMImageIO2Test.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkDICOMImageIO2Test.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkDICOMImageIO2Test.cxx:21: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/itkDicomImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/itkDicomImageIOTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkDicomImageIOTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkDicomImageIOTest.cxx:20: In file included from /<>/Modules/Compatibility/Deprecated/include/itkDicomImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/itkDicomImageIODirection2DTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkGaussianSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkGaussianSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkGroupSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTWRealToHalfHermitianForwardFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFFTWRealToHalfHermitianForwardFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/itkDICOMImageSeriesTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/itkDicomImageIODirection2DTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkDicomImageIODirection2DTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkDicomImageIODirection2DTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/itkDICOMImageSeriesTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/itkDICOMImageSeriesTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkDICOMImageSeriesTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkDICOMImageSeriesTest.cxx:19: In file included from /<>/Modules/Compatibility/Deprecated/include/itkDICOMImageIO2.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/itkDICOMSeriesFileNamesTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkForwardFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkForwardFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscreteMeanCurvatureQuadEdgeMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDiscreteMeanCurvatureQuadEdgeMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkDiscreteMinimumCurvatureQuadEdgeMeshFilterPython.cpp, ../../../lib/itkDiscreteMinimumCurvatureQuadEdgeMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkDiscretePrincipalCurvaturesQuadEdgeMeshFilterPython.cpp, ../../../lib/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/itkDICOMSeriesFileNamesTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkDICOMSeriesFileNamesTest.cxx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/itkImageReadDICOMSeriesWriteTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/itkDICOMImageSeriesTest2.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkDICOMImageSeriesTest2.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkDICOMImageSeriesTest2.cxx:19: In file included from /<>/Modules/Compatibility/Deprecated/include/itkDICOMImageIO2.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIODirectionsTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkGroupSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkGroupSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkImageMaskSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIODirectionsTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIODirectionsTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIODirectionsTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileWriter.h:23: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIOTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/itkImageReadDICOMSeriesWriteTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkImageReadDICOMSeriesWriteTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkImageReadDICOMSeriesWriteTest.cxx:19: In file included from /<>/Modules/IO/GDCM/include/itkGDCMImageIO.h:33: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIOTest2.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIOTest2.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOTest2.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOTest2.cxx:19: In file included from /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOTest.h:26: In file included from /<>/Modules/Compatibility/Deprecated/include/itkAnalyzeImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIOBadHeader.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkImageMaskSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkImageMaskSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkLandmarkSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkMatrixCoefficientsPython.cpp, ../../../lib/itkMatrixCoefficientsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscreteMinimumCurvatureQuadEdgeMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDiscreteMinimumCurvatureQuadEdgeMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkSmoothingQuadEdgeMeshFilterPython.cpp, ../../../lib/itkSmoothingQuadEdgeMeshFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIOBadHeader.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOBadHeader.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOBadHeader.cxx:19: In file included from /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOTest.h:26: In file included from /<>/Modules/Compatibility/Deprecated/include/itkAnalyzeImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIORGBImageTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkBinShrinkImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinShrinkImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkChangeInformationImageFilterPython.cpp, ../../../lib/itkChangeInformationImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIORGBImageTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIORGBImageTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIORGBImageTest.cxx:19: In file included from /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOTest.h:26: In file included from /<>/Modules/Compatibility/Deprecated/include/itkAnalyzeImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkConstantPadImageFilterPython.cpp, ../../../lib/itkConstantPadImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkLandmarkSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkLandmarkSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkLineSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkMatrixCoefficientsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMatrixCoefficients.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkLineSpatialObjectPointPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkSmoothingQuadEdgeMeshFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSmoothingQuadEdgeMeshFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating ITKQuadEdgeMeshFilteringPython.cpp, ../../../lib/ITKQuadEdgeMeshFilteringPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/ITKQuadEdgeMeshFilteringPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKQuadEdgeMeshFiltering.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKQuadEdgeMeshFilteringPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/build.make Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/ITKQuadEdgeMeshFilteringPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/ITKQuadEdgeMeshFilteringPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/ITKQuadEdgeMeshFilteringPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkBorderQuadEdgeMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkLineSpatialObjectPointPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkLineSpatialObjectPointPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkMetaConverterBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIOTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOTest.cxx:19: In file included from /<>/Modules/Compatibility/Deprecated/test/itkAnalyzeImageIOTest.h:26: In file included from /<>/Modules/Compatibility/Deprecated/include/itkAnalyzeImageIOFactory.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ 1 warning generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Linking CXX executable ../../../../bin/DeprecatedIOTestDriver make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/DeprecatedIOTestDriver.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/DeprecatedIOTestDriver.dir/DeprecatedIOTestDriver.cxx.o CMakeFiles/DeprecatedIOTestDriver.dir/itkDICOMImageIO2Test.cxx.o CMakeFiles/DeprecatedIOTestDriver.dir/itkDicomImageIOTest.cxx.o CMakeFiles/DeprecatedIOTestDriver.dir/itkDicomImageIODirection2DTest.cxx.o CMakeFiles/DeprecatedIOTestDriver.dir/itkDICOMImageSeriesTest.cxx.o CMakeFiles/DeprecatedIOTestDriver.dir/itkDICOMImageSeriesTest2.cxx.o CMakeFiles/DeprecatedIOTestDriver.dir/itkDICOMSeriesFileNamesTest.cxx.o CMakeFiles/DeprecatedIOTestDriver.dir/itkImageReadDICOMSeriesWriteTest.cxx.o CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIODirectionsTest.cxx.o CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIOTest.cxx.o CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIOTest2.cxx.o CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIOBadHeader.cxx.o CMakeFiles/DeprecatedIOTestDriver.dir/itkAnalyzeImageIORGBImageTest.cxx.o -o ../../../../bin/DeprecatedIOTestDriver ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKAnalyzeIO-TestHelper.so ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKDeprecated-4.12.so.1 ../../../../lib/libITKDICOMParser-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm ../../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 85%] Built target DeprecatedIOTestDriver make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/itkDeprecatedPrintTest.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/itkDeprecatedPrintTest.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/Deprecated/test /<>/BUILD /<>/BUILD/Modules/Compatibility/Deprecated/test /<>/BUILD/Modules/Compatibility/Deprecated/test/CMakeFiles/itkDeprecatedPrintTest.dir/DependInfo.cmake --color= Scanning dependencies of target itkDeprecatedPrintTest make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/test/CMakeFiles/itkDeprecatedPrintTest.dir/build.make Modules/Compatibility/Deprecated/test/CMakeFiles/itkDeprecatedPrintTest.dir/build make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Modules/Compatibility/Deprecated/test/CMakeFiles/itkDeprecatedPrintTest.dir/itkDeprecatedPrintTest.cxx.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkMetaConverterBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkMetaConverterBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkPlaneSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkLineSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkLineSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkPolygonGroupSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/c++ -I/usr/include/gdcm-2.8 -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Core/ImageAdaptors/include -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Numerics/Statistics/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Registration/Common/include -I/usr/include/double-conversion -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/GDCM/include -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/IO/ImageBase/include -I/<>/Modules/IO/JPEG/include -I/<>/Modules/IO/Meta/include -I/<>/Modules/IO/NIFTI/include -I/<>/Modules/IO/NRRD/include -I/<>/Modules/IO/PNG/include -I/<>/Modules/IO/TIFF/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/Compatibility/Deprecated/test -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIE -o CMakeFiles/itkDeprecatedPrintTest.dir/itkDeprecatedPrintTest.cxx.o -c /<>/Modules/Compatibility/Deprecated/test/itkDeprecatedPrintTest.cxx In file included from /<>/Modules/Compatibility/Deprecated/test/itkDeprecatedPrintTest.cxx:19: In file included from /<>/Modules/IO/ImageBase/include/itkImageFileReader.h:24: In file included from /<>/Modules/IO/ImageBase/include/itkImageIOBase.h:26: In file included from /<>/Modules/Core/Common/include/itkImageIORegion.h:24: In file included from /<>/Modules/Core/Common/include/itkImageRegion.h:34: In file included from /<>/Modules/Core/Common/include/itkContinuousIndex.h:21: In file included from /<>/Modules/Core/Common/include/itkPoint.h:321: /<>/Modules/Core/Common/include/itkPoint.hxx:259:45: warning: declaration shadows a typedef in 'BarycentricCombination' [-Wshadow] typedef typename TPointContainer::Element PointType; ^ /<>/Modules/Core/Common/include/itkPoint.h:308:48: note: previous declaration is here typedef typename PointContainerType::Element PointType; ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkDeprecatedPrintTest.cxx:21: /<>/Modules/Compatibility/Deprecated/include/itkBalloonForceFilter.h:192:16: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateData(); ^ /<>/Modules/Compatibility/Deprecated/test/itkDeprecatedPrintTest.cxx:39:8: note: in instantiation of template class 'itk::BalloonForceFilter >, itk::Mesh > >' requested here itk::BalloonForceFilter::Pointer BalloonForceFilterObj = ^ /<>/Modules/Core/Common/include/itkProcessObject.h:744:16: note: overridden virtual function is here virtual void GenerateData() {} ^ In file included from /<>/Modules/Compatibility/Deprecated/test/itkDeprecatedPrintTest.cxx:22: /<>/Modules/Compatibility/Deprecated/include/itkDeformableMesh3DFilter.h:164:16: warning: 'GenerateData' overrides a member function but is not marked 'override' [-Winconsistent-missing-override] virtual void GenerateData(); ^ /<>/Modules/Compatibility/Deprecated/test/itkDeprecatedPrintTest.cxx:43:8: note: in instantiation of template class 'itk::DeformableMesh3DFilter >, itk::Mesh > >' requested here itk::DeformableMesh3DFilter::Pointer DeformableMesh3DFilterObj = ^ /<>/Modules/Core/Common/include/itkProcessObject.h:744:16: note: overridden virtual function is here virtual void GenerateData() {} ^ 3 warnings generated. make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Linking CXX executable ../../../../bin/itkDeprecatedPrintTest make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Modules/Compatibility/Deprecated/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/itkDeprecatedPrintTest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -rdynamic CMakeFiles/itkDeprecatedPrintTest.dir/itkDeprecatedPrintTest.cxx.o -o ../../../../bin/itkDeprecatedPrintTest ../../../../lib/libITKIOBioRad-4.12.so.1 ../../../../lib/libITKIOLSM-4.12.so.1 ../../../../lib/libITKIOStimulate-4.12.so.1 ../../../../lib/libITKSpatialObjects-4.12.so.1 ../../../../lib/libITKPath-4.12.so.1 ../../../../lib/libITKMesh-4.12.so.1 ../../../../lib/libITKOptimizers-4.12.so.1 -ldouble-conversion ../../../../lib/libITKIOBMP-4.12.so.1 ../../../../lib/libITKIOGIPL-4.12.so.1 ../../../../lib/libITKIOJPEG-4.12.so.1 ../../../../lib/libITKIOMeta-4.12.so.1 ../../../../lib/libITKIONIFTI-4.12.so.1 ../../../../lib/libITKIONRRD-4.12.so.1 ../../../../lib/libITKIOPNG-4.12.so.1 ../../../../lib/libITKIOTIFF-4.12.so.1 ../../../../lib/libITKIOVTK-4.12.so.1 ../../../../lib/libITKAnalyzeIO-TestHelper.so ../../../../lib/libITKStatistics-4.12.so.1 ../../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../../lib/libITKMetaIO-4.12.so.1 ../../../../lib/libITKTransform-4.12.so.1 -lz ../../../../lib/libITKDeprecated-4.12.so.1 ../../../../lib/libITKDICOMParser-4.12.so.1 ../../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../../lib/libITKIOImageBase-4.12.so.1 ../../../../lib/libITKCommon-4.12.so.1 ../../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../../lib/libitkvnl_algo-4.12.so.1 ../../../../lib/libitkvnl-4.12.so.1 ../../../../lib/libitkv3p_netlib-4.12.so.1 ../../../../lib/libitknetlib-4.12.so.1 ../../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -lm ../../../../lib/libitksys-4.12.so.1 -ldl -Wl,-rpath-link,/<>/BUILD/lib make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 85%] Built target itkDeprecatedPrintTest make[2]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/FEM/CMakeFiles/ITKFEM-all.dir/build.make Modules/Numerics/FEM/CMakeFiles/ITKFEM-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/FEM /<>/BUILD /<>/BUILD/Modules/Numerics/FEM /<>/BUILD/Modules/Numerics/FEM/CMakeFiles/ITKFEM-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFEM-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Numerics/FEM/CMakeFiles/ITKFEM-all.dir/build.make Modules/Numerics/FEM/CMakeFiles/ITKFEM-all.dir/build make[3]: Nothing to be done for 'Modules/Numerics/FEM/CMakeFiles/ITKFEM-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKFEM-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Registration/FEM/CMakeFiles/ITKFEMRegistration-all.dir/build.make Modules/Registration/FEM/CMakeFiles/ITKFEMRegistration-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/FEM /<>/BUILD /<>/BUILD/Modules/Registration/FEM /<>/BUILD/Modules/Registration/FEM/CMakeFiles/ITKFEMRegistration-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFEMRegistration-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Registration/FEM/CMakeFiles/ITKFEMRegistration-all.dir/build.make Modules/Registration/FEM/CMakeFiles/ITKFEMRegistration-all.dir/build make[3]: Nothing to be done for 'Modules/Registration/FEM/CMakeFiles/ITKFEMRegistration-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKFEMRegistration-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformHDF5/CMakeFiles/ITKIOTransformHDF5-all.dir/build.make Modules/IO/TransformHDF5/CMakeFiles/ITKIOTransformHDF5-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformHDF5 /<>/BUILD /<>/BUILD/Modules/IO/TransformHDF5 /<>/BUILD/Modules/IO/TransformHDF5/CMakeFiles/ITKIOTransformHDF5-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformHDF5-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformHDF5/CMakeFiles/ITKIOTransformHDF5-all.dir/build.make Modules/IO/TransformHDF5/CMakeFiles/ITKIOTransformHDF5-all.dir/build make[3]: Nothing to be done for 'Modules/IO/TransformHDF5/CMakeFiles/ITKIOTransformHDF5-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKIOTransformHDF5-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformInsightLegacy/CMakeFiles/ITKIOTransformInsightLegacy-all.dir/build.make Modules/IO/TransformInsightLegacy/CMakeFiles/ITKIOTransformInsightLegacy-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformInsightLegacy /<>/BUILD /<>/BUILD/Modules/IO/TransformInsightLegacy /<>/BUILD/Modules/IO/TransformInsightLegacy/CMakeFiles/ITKIOTransformInsightLegacy-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformInsightLegacy-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformInsightLegacy/CMakeFiles/ITKIOTransformInsightLegacy-all.dir/build.make Modules/IO/TransformInsightLegacy/CMakeFiles/ITKIOTransformInsightLegacy-all.dir/build make[3]: Nothing to be done for 'Modules/IO/TransformInsightLegacy/CMakeFiles/ITKIOTransformInsightLegacy-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKIOTransformInsightLegacy-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformMatlab/CMakeFiles/ITKIOTransformMatlab-all.dir/build.make Modules/IO/TransformMatlab/CMakeFiles/ITKIOTransformMatlab-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformMatlab /<>/BUILD /<>/BUILD/Modules/IO/TransformMatlab /<>/BUILD/Modules/IO/TransformMatlab/CMakeFiles/ITKIOTransformMatlab-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformMatlab-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/IO/TransformMatlab/CMakeFiles/ITKIOTransformMatlab-all.dir/build.make Modules/IO/TransformMatlab/CMakeFiles/ITKIOTransformMatlab-all.dir/build make[3]: Nothing to be done for 'Modules/IO/TransformMatlab/CMakeFiles/ITKIOTransformMatlab-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKIOTransformMatlab-all make[2]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/Review/CMakeFiles/ITKReview-all.dir/build.make Modules/Nonunit/Review/CMakeFiles/ITKReview-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/Review /<>/BUILD /<>/BUILD/Modules/Nonunit/Review /<>/BUILD/Modules/Nonunit/Review/CMakeFiles/ITKReview-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKReview-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Nonunit/Review/CMakeFiles/ITKReview-all.dir/build.make Modules/Nonunit/Review/CMakeFiles/ITKReview-all.dir/build make[3]: Nothing to be done for 'Modules/Nonunit/Review/CMakeFiles/ITKReview-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 85%] Built target ITKReview-all make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingPython.dir/build.make Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkAnisotropicDiffusionImageFilterPython.cpp, ../../../lib/itkAnisotropicDiffusionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkBorderQuadEdgeMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkBorderQuadEdgeMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkCleanQuadEdgeMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkPlaneSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkPlaneSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkSceneSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkPolygonGroupSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkPolygonGroupSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkSpatialObjectToImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkSceneSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSceneSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkSurfaceSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkCleanQuadEdgeMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkCleanQuadEdgeMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDelaunayConformingQuadEdgeMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkChangeInformationImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkChangeInformationImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkCropImageFilterPython.cpp, ../../../lib/itkCropImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkSurfaceSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSurfaceSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkSurfaceSpatialObjectPointPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkSpatialObjectToImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSpatialObjectToImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkTubeSpatialObjectPointPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkTubeSpatialObjectPointPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkTubeSpatialObjectPointPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKSpatialObjects/CMakeFiles/ITKSpatialObjectsPython.dir/itkVesselTubeSpatialObjectPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkSurfaceSpatialObjectPointPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkSurfaceSpatialObjectPointPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkCyclicShiftImageFilterPython.cpp, ../../../lib/itkCyclicShiftImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkFullToHalfHermitianImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFullToHalfHermitianImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkHalfToFullHermitianImageFilterPython.cpp, ../../../lib/itkHalfToFullHermitianImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDelaunayConformingQuadEdgeMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDelaunayConformingQuadEdgeMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteCurvatureQuadEdgeMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteCurvatureQuadEdgeMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscreteCurvatureQuadEdgeMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteCurvatureTensorQuadEdgeMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkHalfHermitianToRealInverseFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHalfHermitianToRealInverseFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Generating itkInverseFFTImageFilterPython.cpp, ../../../lib/itkInverseFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/c++ -DITKSpatialObjectsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Core/SpatialObjects/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKSpatialObjectsPython.dir/itkVesselTubeSpatialObjectPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKSpatialObjects/itkVesselTubeSpatialObjectPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 85%] Linking CXX shared module ../../../lib/_ITKSpatialObjectsPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKSpatialObjects && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKSpatialObjectsPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKSpatialObjectsPython.so CMakeFiles/ITKSpatialObjectsPython.dir/ITKSpatialObjectsPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkSpatialObjectPropertyPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkAffineGeometryFramePython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkSpatialObjectBasePython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkSpatialObjectPointPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkContourSpatialObjectPointPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkDTITubeSpatialObjectPointPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkVesselTubeSpatialObjectPointPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkPointBasedSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkImageSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkBlobSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkPolygonSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkArrowSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkBoxSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkContourSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkDTITubeSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkEllipseSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkGaussianSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkGroupSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkImageMaskSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkLandmarkSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkLineSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkLineSpatialObjectPointPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkMetaConverterBasePython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkPlaneSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkPolygonGroupSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkSceneSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkSpatialObjectToImageFilterPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkSurfaceSpatialObjectPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkSurfaceSpatialObjectPointPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkTubeSpatialObjectPointPython.cpp.o CMakeFiles/ITKSpatialObjectsPython.dir/itkVesselTubeSpatialObjectPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 86%] Built target ITKSpatialObjectsPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/build.make Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkAccumulateImageFilterPython.cpp, ../../../lib/itkAccumulateImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteCurvatureTensorQuadEdgeMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscreteCurvatureTensorQuadEdgeMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteGaussianCurvatureQuadEdgeMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteGaussianCurvatureQuadEdgeMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscreteGaussianCurvatureQuadEdgeMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteMaximumCurvatureQuadEdgeMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteMaximumCurvatureQuadEdgeMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscreteMaximumCurvatureQuadEdgeMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteMeanCurvatureQuadEdgeMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkAccumulateImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAccumulateImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkAdaptiveHistogramEqualizationImageFilterPython.cpp, ../../../lib/itkAdaptiveHistogramEqualizationImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteMeanCurvatureQuadEdgeMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscreteMeanCurvatureQuadEdgeMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteMinimumCurvatureQuadEdgeMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteMinimumCurvatureQuadEdgeMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscreteMinimumCurvatureQuadEdgeMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkMatrixCoefficientsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkMatrixCoefficientsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkMatrixCoefficientsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Building CXX object Wrapping/Modules/ITKQuadEdgeMeshFiltering/CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkSmoothingQuadEdgeMeshFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/c++ -DITKQuadEdgeMeshFilteringPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkSmoothingQuadEdgeMeshFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering/itkSmoothingQuadEdgeMeshFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Linking CXX shared module ../../../lib/_ITKQuadEdgeMeshFilteringPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKQuadEdgeMeshFiltering && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKQuadEdgeMeshFilteringPython.so CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/ITKQuadEdgeMeshFilteringPython.cpp.o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkBorderQuadEdgeMeshFilterPython.cpp.o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkCleanQuadEdgeMeshFilterPython.cpp.o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDelaunayConformingQuadEdgeMeshFilterPython.cpp.o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteCurvatureQuadEdgeMeshFilterPython.cpp.o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteCurvatureTensorQuadEdgeMeshFilterPython.cpp.o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteGaussianCurvatureQuadEdgeMeshFilterPython.cpp.o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteMaximumCurvatureQuadEdgeMeshFilterPython.cpp.o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteMeanCurvatureQuadEdgeMeshFilterPython.cpp.o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscreteMinimumCurvatureQuadEdgeMeshFilterPython.cpp.o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkDiscretePrincipalCurvaturesQuadEdgeMeshFilterPython.cpp.o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkMatrixCoefficientsPython.cpp.o CMakeFiles/ITKQuadEdgeMeshFilteringPython.dir/itkSmoothingQuadEdgeMeshFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 86%] Built target ITKQuadEdgeMeshFilteringPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensitySwig.dir/build.make Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensitySwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageIntensity/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageIntensity /<>/BUILD/Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensitySwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageIntensitySwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensitySwig.dir/build.make Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensitySwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 86%] Generating ../../Typedefs/itkAbsImageFilter.i, ../../Typedefs/itkAcosImageFilter.i, ../../Typedefs/itkAddImageFilter.i, ../../Typedefs/itkAndImageFilter.i, ../../Typedefs/itkAsinImageFilter.i, ../../Typedefs/itkAtan2ImageFilter.i, ../../Typedefs/itkAtanImageFilter.i, ../../Typedefs/itkBinaryMagnitudeImageFilter.i, ../../Typedefs/itkBoundedReciprocalImageFilter.i, ../../Typedefs/itkClampImageFilter.i, ../../Typedefs/itkComplexToImaginaryImageFilter.i, ../../Typedefs/itkComplexToModulusImageFilter.i, ../../Typedefs/itkComplexToPhaseImageFilter.i, ../../Typedefs/itkComplexToRealImageFilter.i, ../../Typedefs/itkConstrainedValueAdditionImageFilter.i, ../../Typedefs/itkConstrainedValueDifferenceImageFilter.i, ../../Typedefs/itkCosImageFilter.i, ../../Typedefs/itkDivideImageFilter.i, ../../Typedefs/itkEdgePotentialImageFilter.i, ../../Typedefs/itkExpImageFilter.i, ../../Typedefs/itkExpNegativeImageFilter.i, ../../Typedefs/itkHistogramMatchingImageFilter.i, ../../Typedefs/itkIntensityWindowingImageFilter.i, ../../Typedefs/itkInvertIntensityImageFilter.i, ../../Typedefs/itkLog10ImageFilter.i, ../../Typedefs/itkLogImageFilter.i, ../../Typedefs/itkMagnitudeAndPhaseToComplexImageFilter.i, ../../Typedefs/itkMaskImageFilter.i, ../../Typedefs/itkMaskNegatedImageFilter.i, ../../Typedefs/itkMaximumImageFilter.i, ../../Typedefs/itkMinimumImageFilter.i, ../../Typedefs/itkModulusImageFilter.i, ../../Typedefs/itkMultiplyImageFilter.i, ../../Typedefs/itkNaryAddImageFilter.i, ../../Typedefs/itkNaryMaximumImageFilter.i, ../../Typedefs/itkNormalizeImageFilter.i, ../../Typedefs/itkNormalizeToConstantImageFilter.i, ../../Typedefs/itkNotImageFilter.i, ../../Typedefs/itkOrImageFilter.i, ../../Typedefs/itkPowImageFilter.i, ../../Typedefs/itkRGBToLuminanceImageFilter.i, ../../Typedefs/itkRescaleIntensityImageFilter.i, ../../Typedefs/itkRoundImageFilter.i, ../../Typedefs/itkShiftScaleImageFilter.i, ../../Typedefs/itkSigmoidImageFilter.i, ../../Typedefs/itkSinImageFilter.i, ../../Typedefs/itkSqrtImageFilter.i, ../../Typedefs/itkSquareImageFilter.i, ../../Typedefs/itkSubtractImageFilter.i, ../../Typedefs/itkTanImageFilter.i, ../../Typedefs/itkTernaryAddImageFilter.i, ../../Typedefs/itkTernaryMagnitudeImageFilter.i, ../../Typedefs/itkTernaryMagnitudeSquaredImageFilter.i, ../../Typedefs/itkVectorExpandImageFilter.i, ../../Typedefs/itkVectorIndexSelectionCastImageFilter.i, ../../Typedefs/itkVectorMagnitudeImageFilter.i, ../../Typedefs/itkVectorRescaleIntensityImageFilter.i, ../../Typedefs/itkWeightedAddImageFilter.i, ../../Typedefs/itkXorImageFilter.i, ../../Typedefs/itkAbsImageFilterSwigInterface.h, ../../Typedefs/itkAcosImageFilterSwigInterface.h, ../../Typedefs/itkAddImageFilterSwigInterface.h, ../../Typedefs/itkAndImageFilterSwigInterface.h, ../../Typedefs/itkAsinImageFilterSwigInterface.h, ../../Typedefs/itkAtan2ImageFilterSwigInterface.h, ../../Typedefs/itkAtanImageFilterSwigInterface.h, ../../Typedefs/itkBinaryMagnitudeImageFilterSwigInterface.h, ../../Typedefs/itkBoundedReciprocalImageFilterSwigInterface.h, ../../Typedefs/itkClampImageFilterSwigInterface.h, ../../Typedefs/itkComplexToImaginaryImageFilterSwigInterface.h, ../../Typedefs/itkComplexToModulusImageFilterSwigInterface.h, ../../Typedefs/itkComplexToPhaseImageFilterSwigInterface.h, ../../Typedefs/itkComplexToRealImageFilterSwigInterface.h, ../../Typedefs/itkConstrainedValueAdditionImageFilterSwigInterface.h, ../../Typedefs/itkConstrainedValueDifferenceImageFilterSwigInterface.h, ../../Typedefs/itkCosImageFilterSwigInterface.h, ../../Typedefs/itkDivideImageFilterSwigInterface.h, ../../Typedefs/itkEdgePotentialImageFilterSwigInterface.h, ../../Typedefs/itkExpImageFilterSwigInterface.h, ../../Typedefs/itkExpNegativeImageFilterSwigInterface.h, ../../Typedefs/itkHistogramMatchingImageFilterSwigInterface.h, ../../Typedefs/itkIntensityWindowingImageFilterSwigInterface.h, ../../Typedefs/itkInvertIntensityImageFilterSwigInterface.h, ../../Typedefs/itkLog10ImageFilterSwigInterface.h, ../../Typedefs/itkLogImageFilterSwigInterface.h, ../../Typedefs/itkMagnitudeAndPhaseToComplexImageFilterSwigInterface.h, ../../Typedefs/itkMaskImageFilterSwigInterface.h, ../../Typedefs/itkMaskNegatedImageFilterSwigInterface.h, ../../Typedefs/itkMaximumImageFilterSwigInterface.h, ../../Typedefs/itkMinimumImageFilterSwigInterface.h, ../../Typedefs/itkModulusImageFilterSwigInterface.h, ../../Typedefs/itkMultiplyImageFilterSwigInterface.h, ../../Typedefs/itkNaryAddImageFilterSwigInterface.h, ../../Typedefs/itkNaryMaximumImageFilterSwigInterface.h, ../../Typedefs/itkNormalizeImageFilterSwigInterface.h, ../../Typedefs/itkNormalizeToConstantImageFilterSwigInterface.h, ../../Typedefs/itkNotImageFilterSwigInterface.h, ../../Typedefs/itkOrImageFilterSwigInterface.h, ../../Typedefs/itkPowImageFilterSwigInterface.h, ../../Typedefs/itkRGBToLuminanceImageFilterSwigInterface.h, ../../Typedefs/itkRescaleIntensityImageFilterSwigInterface.h, ../../Typedefs/itkRoundImageFilterSwigInterface.h, ../../Typedefs/itkShiftScaleImageFilterSwigInterface.h, ../../Typedefs/itkSigmoidImageFilterSwigInterface.h, ../../Typedefs/itkSinImageFilterSwigInterface.h, ../../Typedefs/itkSqrtImageFilterSwigInterface.h, ../../Typedefs/itkSquareImageFilterSwigInterface.h, ../../Typedefs/itkSubtractImageFilterSwigInterface.h, ../../Typedefs/itkTanImageFilterSwigInterface.h, ../../Typedefs/itkTernaryAddImageFilterSwigInterface.h, ../../Typedefs/itkTernaryMagnitudeImageFilterSwigInterface.h, ../../Typedefs/itkTernaryMagnitudeSquaredImageFilterSwigInterface.h, ../../Typedefs/itkVectorExpandImageFilterSwigInterface.h, ../../Typedefs/itkVectorIndexSelectionCastImageFilterSwigInterface.h, ../../Typedefs/itkVectorMagnitudeImageFilterSwigInterface.h, ../../Typedefs/itkVectorRescaleIntensityImageFilterSwigInterface.h, ../../Typedefs/itkWeightedAddImageFilterSwigInterface.h, ../../Typedefs/itkXorImageFilterSwigInterface.h, ../../Typedefs/itkAbsImageFilter.idx, ../../Typedefs/itkAcosImageFilter.idx, ../../Typedefs/itkAddImageFilter.idx, ../../Typedefs/itkAndImageFilter.idx, ../../Typedefs/itkAsinImageFilter.idx, ../../Typedefs/itkAtan2ImageFilter.idx, ../../Typedefs/itkAtanImageFilter.idx, ../../Typedefs/itkBinaryMagnitudeImageFilter.idx, ../../Typedefs/itkBoundedReciprocalImageFilter.idx, ../../Typedefs/itkClampImageFilter.idx, ../../Typedefs/itkComplexToImaginaryImageFilter.idx, ../../Typedefs/itkComplexToModulusImageFilter.idx, ../../Typedefs/itkComplexToPhaseImageFilter.idx, ../../Typedefs/itkComplexToRealImageFilter.idx, ../../Typedefs/itkConstrainedValueAdditionImageFilter.idx, ../../Typedefs/itkConstrainedValueDifferenceImageFilter.idx, ../../Typedefs/itkCosImageFilter.idx, ../../Typedefs/itkDivideImageFilter.idx, ../../Typedefs/itkEdgePotentialImageFilter.idx, ../../Typedefs/itkExpImageFilter.idx, ../../Typedefs/itkExpNegativeImageFilter.idx, ../../Typedefs/itkHistogramMatchingImageFilter.idx, ../../Typedefs/itkIntensityWindowingImageFilter.idx, ../../Typedefs/itkInvertIntensityImageFilter.idx, ../../Typedefs/itkLog10ImageFilter.idx, ../../Typedefs/itkLogImageFilter.idx, ../../Typedefs/itkMagnitudeAndPhaseToComplexImageFilter.idx, ../../Typedefs/itkMaskImageFilter.idx, ../../Typedefs/itkMaskNegatedImageFilter.idx, ../../Typedefs/itkMaximumImageFilter.idx, ../../Typedefs/itkMinimumImageFilter.idx, ../../Typedefs/itkModulusImageFilter.idx, ../../Typedefs/itkMultiplyImageFilter.idx, ../../Typedefs/itkNaryAddImageFilter.idx, ../../Typedefs/itkNaryMaximumImageFilter.idx, ../../Typedefs/itkNormalizeImageFilter.idx, ../../Typedefs/itkNormalizeToConstantImageFilter.idx, ../../Typedefs/itkNotImageFilter.idx, ../../Typedefs/itkOrImageFilter.idx, ../../Typedefs/itkPowImageFilter.idx, ../../Typedefs/itkRGBToLuminanceImageFilter.idx, ../../Typedefs/itkRescaleIntensityImageFilter.idx, ../../Typedefs/itkRoundImageFilter.idx, ../../Typedefs/itkShiftScaleImageFilter.idx, ../../Typedefs/itkSigmoidImageFilter.idx, ../../Typedefs/itkSinImageFilter.idx, ../../Typedefs/itkSqrtImageFilter.idx, ../../Typedefs/itkSquareImageFilter.idx, ../../Typedefs/itkSubtractImageFilter.idx, ../../Typedefs/itkTanImageFilter.idx, ../../Typedefs/itkTernaryAddImageFilter.idx, ../../Typedefs/itkTernaryMagnitudeImageFilter.idx, ../../Typedefs/itkTernaryMagnitudeSquaredImageFilter.idx, ../../Typedefs/itkVectorExpandImageFilter.idx, ../../Typedefs/itkVectorIndexSelectionCastImageFilter.idx, ../../Typedefs/itkVectorMagnitudeImageFilter.idx, ../../Typedefs/itkVectorRescaleIntensityImageFilter.idx, ../../Typedefs/itkWeightedAddImageFilter.idx, ../../Typedefs/itkXorImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkAdaptiveHistogramEqualizationImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAdaptiveHistogramEqualizationImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkBinaryProjectionImageFilterPython.cpp, ../../../lib/itkBinaryProjectionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkHalfToFullHermitianImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHalfToFullHermitianImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkRealToHalfHermitianForwardFFTImageFilterPython.cpp, ../../../lib/itkRealToHalfHermitianForwardFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkInverseFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkInverseFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkVnlComplexToComplexFFTImageFilterPython.cpp, ../../../lib/itkVnlComplexToComplexFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkConstantPadImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkConstantPadImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkExpandImageFilterPython.cpp, ../../../lib/itkExpandImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkCyclicShiftImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCyclicShiftImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkFlipImageFilterPython.cpp, ../../../lib/itkFlipImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkExpandImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkExpandImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkInterpolateImageFilterPython.cpp, ../../../lib/itkInterpolateImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkFlipImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFlipImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkMirrorPadImageFilterPython.cpp, ../../../lib/itkMirrorPadImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkVnlComplexToComplexFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVnlComplexToComplexFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkVnlForwardFFTImageFilterPython.cpp, ../../../lib/itkVnlForwardFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkRealToHalfHermitianForwardFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRealToHalfHermitianForwardFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkVnlHalfHermitianToRealInverseFFTImageFilterPython.cpp, ../../../lib/itkVnlHalfHermitianToRealInverseFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/itkAnisotropicDiffusionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAnisotropicDiffusionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkCurvatureAnisotropicDiffusionImageFilterPython.cpp, ../../../lib/itkCurvatureAnisotropicDiffusionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageStatistics.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKPath.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkAbsImageFilter;itkAcosImageFilter;itkAddImageFilter;itkAndImageFilter;itkAsinImageFilter;itkAtan2ImageFilter;itkAtanImageFilter;itkBinaryMagnitudeImageFilter;itkBoundedReciprocalImageFilter;itkClampImageFilter;itkComplexToImaginaryImageFilter;itkComplexToModulusImageFilter;itkComplexToPhaseImageFilter;itkComplexToRealImageFilter;itkConstrainedValueAdditionImageFilter;itkConstrainedValueDifferenceImageFilter;itkCosImageFilter;itkDivideImageFilter;itkEdgePotentialImageFilter;itkExpImageFilter;itkExpNegativeImageFilter;itkHistogramMatchingImageFilter;itkIntensityWindowingImageFilter;itkInvertIntensityImageFilter;itkLog10ImageFilter;itkLogImageFilter;itkMagnitudeAndPhaseToComplexImageFilter;itkMaskImageFilter;itkMaskNegatedImageFilter;itkMaximumImageFilter;itkMinimumImageFilter;itkModulusImageFilter;itkMultiplyImageFilter;itkNaryAddImageFilter;itkNaryMaximumImageFilter;itkNormalizeImageFilter;itkNormalizeToConstantImageFilter;itkNotImageFilter;itkOrImageFilter;itkPowImageFilter;itkRGBToLuminanceImageFilter;itkRescaleIntensityImageFilter;itkRoundImageFilter;itkShiftScaleImageFilter;itkSigmoidImageFilter;itkSinImageFilter;itkSqrtImageFilter;itkSquareImageFilter;itkSubtractImageFilter;itkTanImageFilter;itkTernaryAddImageFilter;itkTernaryMagnitudeImageFilter;itkTernaryMagnitudeSquaredImageFilter;itkVectorExpandImageFilter;itkVectorIndexSelectionCastImageFilter;itkVectorMagnitudeImageFilter;itkVectorRescaleIntensityImageFilter;itkWeightedAddImageFilter;itkXorImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 86%] Built target ITKImageIntensitySwig make[2]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/CMakeFiles/ITKDeprecated-all.dir/build.make Modules/Compatibility/Deprecated/CMakeFiles/ITKDeprecated-all.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Compatibility/Deprecated /<>/BUILD /<>/BUILD/Modules/Compatibility/Deprecated /<>/BUILD/Modules/Compatibility/Deprecated/CMakeFiles/ITKDeprecated-all.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeprecated-all make[3]: Leaving directory '/<>/BUILD' make -f Modules/Compatibility/Deprecated/CMakeFiles/ITKDeprecated-all.dir/build.make Modules/Compatibility/Deprecated/CMakeFiles/ITKDeprecated-all.dir/build make[3]: Nothing to be done for 'Modules/Compatibility/Deprecated/CMakeFiles/ITKDeprecated-all.dir/build'. make[2]: Entering directory '/<>/BUILD' [ 86%] Built target ITKDeprecated-all make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/build.make Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkAbsImageFilterPython.cpp, ../../../lib/itkAbsImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkInterpolateImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkInterpolateImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkOrientImageFilterPython.cpp, ../../../lib/itkOrientImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkBinaryProjectionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryProjectionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkImageMomentsCalculatorPython.cpp, ../../../lib/itkImageMomentsCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkImageMomentsCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageMomentsCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkImagePCAShapeModelEstimatorPython.cpp, ../../../lib/itkImagePCAShapeModelEstimatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkVnlForwardFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVnlForwardFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkVnlInverseFFTImageFilterPython.cpp, ../../../lib/itkVnlInverseFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkVnlHalfHermitianToRealInverseFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVnlHalfHermitianToRealInverseFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkImageShapeModelEstimatorBasePython.cpp, ../../../lib/itkImageShapeModelEstimatorBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkImagePCAShapeModelEstimatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImagePCAShapeModelEstimator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkLabelStatisticsImageFilterPython.cpp, ../../../lib/itkLabelStatisticsImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkCropImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCropImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkPasteImageFilterPython.cpp, ../../../lib/itkPasteImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkImageShapeModelEstimatorBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageShapeModelEstimatorBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkMaximumProjectionImageFilterPython.cpp, ../../../lib/itkMaximumProjectionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkLabelStatisticsImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelStatisticsImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkMeanProjectionImageFilterPython.cpp, ../../../lib/itkMeanProjectionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkMirrorPadImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMirrorPadImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkPermuteAxesImageFilterPython.cpp, ../../../lib/itkPermuteAxesImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkOrientImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkOrientImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkRegionOfInterestImageFilterPython.cpp, ../../../lib/itkRegionOfInterestImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkVnlInverseFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVnlInverseFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkVnlRealToHalfHermitianForwardFFTImageFilterPython.cpp, ../../../lib/itkVnlRealToHalfHermitianForwardFFTImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAbsImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAbsImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkAcosImageFilterPython.cpp, ../../../lib/itkAcosImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkPermuteAxesImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPermuteAxesImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkResampleImageFilterPython.cpp, ../../../lib/itkResampleImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkRegionOfInterestImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRegionOfInterestImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkShrinkImageFilterPython.cpp, ../../../lib/itkShrinkImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/itkCurvatureAnisotropicDiffusionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCurvatureAnisotropicDiffusionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkGradientAnisotropicDiffusionImageFilterPython.cpp, ../../../lib/itkGradientAnisotropicDiffusionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkShrinkImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShrinkImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating itkSliceBySliceImageFilterPython.cpp, ../../../lib/itkSliceBySliceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/itkVnlRealToHalfHermitianForwardFFTImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVnlRealToHalfHermitianForwardFFTImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 86%] Generating ITKFFTPython.cpp, ../../../lib/ITKFFTPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFFT/ITKFFTPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKFFT.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkMaximumProjectionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMaximumProjectionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 87%] Generating itkMedianProjectionImageFilterPython.cpp, ../../../lib/itkMedianProjectionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FFT/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKFFT /<>/BUILD/Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFFTPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/build.make Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 87%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/ITKFFTPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/ITKFFTPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/ITKFFTPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 87%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkComplexToComplexFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkComplexToComplexFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkComplexToComplexFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 87%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkFFTPadImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkResampleImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkResampleImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 87%] Generating itkTileImageFilterPython.cpp, ../../../lib/itkTileImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkPasteImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPasteImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Generating itkVectorResampleImageFilterPython.cpp, ../../../lib/itkVectorResampleImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkMeanProjectionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMeanProjectionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Generating itkMinimumMaximumImageFilterPython.cpp, ../../../lib/itkMinimumMaximumImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkMinimumMaximumImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMinimumMaximumImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Generating itkMinimumProjectionImageFilterPython.cpp, ../../../lib/itkMinimumProjectionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkVectorResampleImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorResampleImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Generating itkWarpImageFilterPython.cpp, ../../../lib/itkWarpImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkFFTPadImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTPadImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkFFTShiftImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAcosImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAcosImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Generating itkAddImageFilterPython.cpp, ../../../lib/itkAddImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkSliceBySliceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSliceBySliceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Generating itkWrapPadImageFilterPython.cpp, ../../../lib/itkWrapPadImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkFFTShiftImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTShiftImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkFFTWComplexToComplexFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkFFTWComplexToComplexFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTWComplexToComplexFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkFFTWForwardFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkFFTWForwardFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTWForwardFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkFFTWGlobalConfigurationPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkMedianProjectionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMedianProjectionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Generating itkStandardDeviationProjectionImageFilterPython.cpp, ../../../lib/itkStandardDeviationProjectionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkFFTWGlobalConfigurationPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTWGlobalConfigurationPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkFFTWHalfHermitianToRealInverseFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkWarpImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkWarpImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Generating itkStatisticsImageFilterPython.cpp, ../../../lib/itkStatisticsImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkTileImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTileImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Generating itkZeroFluxNeumannPadImageFilterPython.cpp, ../../../lib/itkZeroFluxNeumannPadImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkFFTWHalfHermitianToRealInverseFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTWHalfHermitianToRealInverseFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkFFTWInverseFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/itkGradientAnisotropicDiffusionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGradientAnisotropicDiffusionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Generating itkVectorCurvatureAnisotropicDiffusionImageFilterPython.cpp, ../../../lib/itkVectorCurvatureAnisotropicDiffusionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkFFTWInverseFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTWInverseFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkFFTWRealToHalfHermitianForwardFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkFFTWRealToHalfHermitianForwardFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkFFTWRealToHalfHermitianForwardFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkForwardFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkStatisticsImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStatisticsImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Generating itkSumProjectionImageFilterPython.cpp, ../../../lib/itkSumProjectionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkForwardFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkForwardFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkFullToHalfHermitianImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkFullToHalfHermitianImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkFullToHalfHermitianImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkHalfHermitianToRealInverseFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkMinimumProjectionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMinimumProjectionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkHalfToFullHermitianImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkHalfHermitianToRealInverseFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkHalfHermitianToRealInverseFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkInverseFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkHalfToFullHermitianImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkHalfToFullHermitianImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkRealToHalfHermitianForwardFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkInverseFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkInverseFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkVnlComplexToComplexFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkRealToHalfHermitianForwardFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkRealToHalfHermitianForwardFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkVnlForwardFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkVnlComplexToComplexFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkVnlComplexToComplexFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkVnlHalfHermitianToRealInverseFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkVnlForwardFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkVnlForwardFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkVnlInverseFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkVnlHalfHermitianToRealInverseFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkVnlHalfHermitianToRealInverseFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Building CXX object Wrapping/Modules/ITKFFT/CMakeFiles/ITKFFTPython.dir/itkVnlRealToHalfHermitianForwardFFTImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkVnlInverseFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkVnlInverseFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Generating itkVectorGradientAnisotropicDiffusionImageFilterPython.cpp, ../../../lib/itkVectorGradientAnisotropicDiffusionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/c++ -DITKFFTPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FFT/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFFTPython.dir/itkVnlRealToHalfHermitianForwardFFTImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFFT/itkVnlRealToHalfHermitianForwardFFTImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 88%] Linking CXX shared module ../../../lib/_ITKFFTPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFFT && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFFTPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKFFTPython.so CMakeFiles/ITKFFTPython.dir/ITKFFTPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkComplexToComplexFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkFFTPadImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkFFTShiftImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkFFTWComplexToComplexFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkFFTWForwardFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkFFTWGlobalConfigurationPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkFFTWHalfHermitianToRealInverseFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkFFTWInverseFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkFFTWRealToHalfHermitianForwardFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkForwardFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkFullToHalfHermitianImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkHalfHermitianToRealInverseFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkHalfToFullHermitianImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkInverseFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkRealToHalfHermitianForwardFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkVnlComplexToComplexFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkVnlForwardFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkVnlHalfHermitianToRealInverseFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkVnlInverseFFTImageFilterPython.cpp.o CMakeFiles/ITKFFTPython.dir/itkVnlRealToHalfHermitianForwardFFTImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKFFTPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingSwig.dir/build.make Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Thresholding/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKThresholding /<>/BUILD/Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKThresholdingSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingSwig.dir/build.make Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ../../Typedefs/itkHistogramThresholdCalculator.i, ../../Typedefs/itkHistogramThresholdImageFilter.i, ../../Typedefs/itkBinaryThresholdImageFilter.i, ../../Typedefs/itkBinaryThresholdProjectionImageFilter.i, ../../Typedefs/itkHuangThresholdCalculator.i, ../../Typedefs/itkHuangThresholdImageFilter.i, ../../Typedefs/itkIntermodesThresholdCalculator.i, ../../Typedefs/itkIntermodesThresholdImageFilter.i, ../../Typedefs/itkIsoDataThresholdCalculator.i, ../../Typedefs/itkIsoDataThresholdImageFilter.i, ../../Typedefs/itkKappaSigmaThresholdImageFilter.i, ../../Typedefs/itkKittlerIllingworthThresholdCalculator.i, ../../Typedefs/itkKittlerIllingworthThresholdImageFilter.i, ../../Typedefs/itkLiThresholdCalculator.i, ../../Typedefs/itkLiThresholdImageFilter.i, ../../Typedefs/itkMaximumEntropyThresholdCalculator.i, ../../Typedefs/itkMaximumEntropyThresholdImageFilter.i, ../../Typedefs/itkMomentsThresholdCalculator.i, ../../Typedefs/itkMomentsThresholdImageFilter.i, ../../Typedefs/itkOtsuMultipleThresholdsImageFilter.i, ../../Typedefs/itkOtsuThresholdCalculator.i, ../../Typedefs/itkOtsuThresholdImageFilter.i, ../../Typedefs/itkRenyiEntropyThresholdCalculator.i, ../../Typedefs/itkRenyiEntropyThresholdImageFilter.i, ../../Typedefs/itkShanbhagThresholdCalculator.i, ../../Typedefs/itkShanbhagThresholdImageFilter.i, ../../Typedefs/itkThresholdImageFilter.i, ../../Typedefs/itkThresholdLabelerImageFilter.i, ../../Typedefs/itkTriangleThresholdCalculator.i, ../../Typedefs/itkTriangleThresholdImageFilter.i, ../../Typedefs/itkYenThresholdCalculator.i, ../../Typedefs/itkYenThresholdImageFilter.i, ../../Typedefs/itkHistogramThresholdCalculatorSwigInterface.h, ../../Typedefs/itkHistogramThresholdImageFilterSwigInterface.h, ../../Typedefs/itkBinaryThresholdImageFilterSwigInterface.h, ../../Typedefs/itkBinaryThresholdProjectionImageFilterSwigInterface.h, ../../Typedefs/itkHuangThresholdCalculatorSwigInterface.h, ../../Typedefs/itkHuangThresholdImageFilterSwigInterface.h, ../../Typedefs/itkIntermodesThresholdCalculatorSwigInterface.h, ../../Typedefs/itkIntermodesThresholdImageFilterSwigInterface.h, ../../Typedefs/itkIsoDataThresholdCalculatorSwigInterface.h, ../../Typedefs/itkIsoDataThresholdImageFilterSwigInterface.h, ../../Typedefs/itkKappaSigmaThresholdImageFilterSwigInterface.h, ../../Typedefs/itkKittlerIllingworthThresholdCalculatorSwigInterface.h, ../../Typedefs/itkKittlerIllingworthThresholdImageFilterSwigInterface.h, ../../Typedefs/itkLiThresholdCalculatorSwigInterface.h, ../../Typedefs/itkLiThresholdImageFilterSwigInterface.h, ../../Typedefs/itkMaximumEntropyThresholdCalculatorSwigInterface.h, ../../Typedefs/itkMaximumEntropyThresholdImageFilterSwigInterface.h, ../../Typedefs/itkMomentsThresholdCalculatorSwigInterface.h, ../../Typedefs/itkMomentsThresholdImageFilterSwigInterface.h, ../../Typedefs/itkOtsuMultipleThresholdsImageFilterSwigInterface.h, ../../Typedefs/itkOtsuThresholdCalculatorSwigInterface.h, ../../Typedefs/itkOtsuThresholdImageFilterSwigInterface.h, ../../Typedefs/itkRenyiEntropyThresholdCalculatorSwigInterface.h, ../../Typedefs/itkRenyiEntropyThresholdImageFilterSwigInterface.h, ../../Typedefs/itkShanbhagThresholdCalculatorSwigInterface.h, ../../Typedefs/itkShanbhagThresholdImageFilterSwigInterface.h, ../../Typedefs/itkThresholdImageFilterSwigInterface.h, ../../Typedefs/itkThresholdLabelerImageFilterSwigInterface.h, ../../Typedefs/itkTriangleThresholdCalculatorSwigInterface.h, ../../Typedefs/itkTriangleThresholdImageFilterSwigInterface.h, ../../Typedefs/itkYenThresholdCalculatorSwigInterface.h, ../../Typedefs/itkYenThresholdImageFilterSwigInterface.h, ../../Typedefs/itkHistogramThresholdCalculator.idx, ../../Typedefs/itkHistogramThresholdImageFilter.idx, ../../Typedefs/itkBinaryThresholdImageFilter.idx, ../../Typedefs/itkBinaryThresholdProjectionImageFilter.idx, ../../Typedefs/itkHuangThresholdCalculator.idx, ../../Typedefs/itkHuangThresholdImageFilter.idx, ../../Typedefs/itkIntermodesThresholdCalculator.idx, ../../Typedefs/itkIntermodesThresholdImageFilter.idx, ../../Typedefs/itkIsoDataThresholdCalculator.idx, ../../Typedefs/itkIsoDataThresholdImageFilter.idx, ../../Typedefs/itkKappaSigmaThresholdImageFilter.idx, ../../Typedefs/itkKittlerIllingworthThresholdCalculator.idx, ../../Typedefs/itkKittlerIllingworthThresholdImageFilter.idx, ../../Typedefs/itkLiThresholdCalculator.idx, ../../Typedefs/itkLiThresholdImageFilter.idx, ../../Typedefs/itkMaximumEntropyThresholdCalculator.idx, ../../Typedefs/itkMaximumEntropyThresholdImageFilter.idx, ../../Typedefs/itkMomentsThresholdCalculator.idx, ../../Typedefs/itkMomentsThresholdImageFilter.idx, ../../Typedefs/itkOtsuMultipleThresholdsImageFilter.idx, ../../Typedefs/itkOtsuThresholdCalculator.idx, ../../Typedefs/itkOtsuThresholdImageFilter.idx, ../../Typedefs/itkRenyiEntropyThresholdCalculator.idx, ../../Typedefs/itkRenyiEntropyThresholdImageFilter.idx, ../../Typedefs/itkShanbhagThresholdCalculator.idx, ../../Typedefs/itkShanbhagThresholdImageFilter.idx, ../../Typedefs/itkThresholdImageFilter.idx, ../../Typedefs/itkThresholdLabelerImageFilter.idx, ../../Typedefs/itkTriangleThresholdCalculator.idx, ../../Typedefs/itkTriangleThresholdImageFilter.idx, ../../Typedefs/itkYenThresholdCalculator.idx, ../../Typedefs/itkYenThresholdImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkStandardDeviationProjectionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStandardDeviationProjectionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelSwig.dir/build.make Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageLabel/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageLabel /<>/BUILD/Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageLabelSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelSwig.dir/build.make Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ../../Typedefs/itkBinaryContourImageFilter.i, ../../Typedefs/itkChangeLabelImageFilter.i, ../../Typedefs/itkLabelContourImageFilter.i, ../../Typedefs/itkBinaryContourImageFilterSwigInterface.h, ../../Typedefs/itkChangeLabelImageFilterSwigInterface.h, ../../Typedefs/itkLabelContourImageFilterSwigInterface.h, ../../Typedefs/itkBinaryContourImageFilter.idx, ../../Typedefs/itkChangeLabelImageFilter.idx, ../../Typedefs/itkLabelContourImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageLabel && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageLabel.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkBinaryContourImageFilter;itkChangeLabelImageFilter;itkLabelContourImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKImageLabelSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandSwig.dir/build.make Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/NarrowBand/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKNarrowBand /<>/BUILD/Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNarrowBandSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandSwig.dir/build.make Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ../../Typedefs/ITKNarrowBandBase.i, ../../Typedefs/itkNarrowBandImageFilterBase.i, ../../Typedefs/ITKNarrowBandBaseSwigInterface.h, ../../Typedefs/itkNarrowBandImageFilterBaseSwigInterface.h, ../../Typedefs/ITKNarrowBandBase.idx, ../../Typedefs/itkNarrowBandImageFilterBase.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKNarrowBand && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKNarrowBand.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCurvatureFlow.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKFiniteDifference.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "ITKNarrowBandBase;itkNarrowBandImageFilterBase" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKNarrowBandSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageCompareSwig.dir/build.make Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageCompareSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageCompare/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageCompare /<>/BUILD/Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageCompareSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageCompareSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageCompareSwig.dir/build.make Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageCompareSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ../../Typedefs/itkAbsoluteValueDifferenceImageFilter.i, ../../Typedefs/itkCheckerBoardImageFilter.i, ../../Typedefs/itkSTAPLEImageFilter.i, ../../Typedefs/itkSimilarityIndexImageFilter.i, ../../Typedefs/itkSquaredDifferenceImageFilter.i, ../../Typedefs/itkAbsoluteValueDifferenceImageFilterSwigInterface.h, ../../Typedefs/itkCheckerBoardImageFilterSwigInterface.h, ../../Typedefs/itkSTAPLEImageFilterSwigInterface.h, ../../Typedefs/itkSimilarityIndexImageFilterSwigInterface.h, ../../Typedefs/itkSquaredDifferenceImageFilterSwigInterface.h, ../../Typedefs/itkAbsoluteValueDifferenceImageFilter.idx, ../../Typedefs/itkCheckerBoardImageFilter.idx, ../../Typedefs/itkSTAPLEImageFilter.idx, ../../Typedefs/itkSimilarityIndexImageFilter.idx, ../../Typedefs/itkSquaredDifferenceImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageCompare.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFilterBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkAbsoluteValueDifferenceImageFilter;itkCheckerBoardImageFilter;itkSTAPLEImageFilter;itkSimilarityIndexImageFilter;itkSquaredDifferenceImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKImageCompareSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientSwig.dir/build.make Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageGradient/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageGradient /<>/BUILD/Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageGradientSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientSwig.dir/build.make Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ../../Typedefs/itkDifferenceOfGaussiansGradientImageFilter.i, ../../Typedefs/itkGradientImageFilter.i, ../../Typedefs/itkGradientMagnitudeImageFilter.i, ../../Typedefs/itkGradientMagnitudeRecursiveGaussianImageFilter.i, ../../Typedefs/itkGradientRecursiveGaussianImageFilter.i, ../../Typedefs/itkVectorGradientMagnitudeImageFilter.i, ../../Typedefs/itkDifferenceOfGaussiansGradientImageFilterSwigInterface.h, ../../Typedefs/itkGradientImageFilterSwigInterface.h, ../../Typedefs/itkGradientMagnitudeImageFilterSwigInterface.h, ../../Typedefs/itkGradientMagnitudeRecursiveGaussianImageFilterSwigInterface.h, ../../Typedefs/itkGradientRecursiveGaussianImageFilterSwigInterface.h, ../../Typedefs/itkVectorGradientMagnitudeImageFilterSwigInterface.h, ../../Typedefs/itkDifferenceOfGaussiansGradientImageFilter.idx, ../../Typedefs/itkGradientImageFilter.idx, ../../Typedefs/itkGradientMagnitudeImageFilter.idx, ../../Typedefs/itkGradientMagnitudeRecursiveGaussianImageFilter.idx, ../../Typedefs/itkGradientRecursiveGaussianImageFilter.idx, ../../Typedefs/itkVectorGradientMagnitudeImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkWrapPadImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkWrapPadImageFilter.i make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionSwig.dir/build.make Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BiasCorrection/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKBiasCorrection /<>/BUILD/Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBiasCorrectionSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionSwig.dir/build.make Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ../../Typedefs/itkN4BiasFieldCorrectionImageFilter.i, ../../Typedefs/itkN4BiasFieldCorrectionImageFilterSwigInterface.h, ../../Typedefs/itkN4BiasFieldCorrectionImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBiasCorrection && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKBiasCorrection.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKOptimizers.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkN4BiasFieldCorrectionImageFilter make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKBiasCorrectionSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldSwig.dir/build.make Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DisplacementField/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKDisplacementField /<>/BUILD/Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDisplacementFieldSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldSwig.dir/build.make Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ../../Typedefs/itkTimeVaryingVelocityFieldTransform.i, ../../Typedefs/itkBSplineExponentialDiffeomorphicTransform.i, ../../Typedefs/itkBSplineSmoothingOnUpdateDisplacementFieldTransform.i, ../../Typedefs/itkConstantVelocityFieldTransform.i, ../../Typedefs/itkDisplacementFieldJacobianDeterminantFilter.i, ../../Typedefs/itkDisplacementFieldTransform.i, ../../Typedefs/itkGaussianExponentialDiffeomorphicTransform.i, ../../Typedefs/itkGaussianSmoothingOnUpdateDisplacementFieldTransform.i, ../../Typedefs/itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform.i, ../../Typedefs/itkVelocityFieldTransform.i, ../../Typedefs/itkTimeVaryingVelocityFieldTransformSwigInterface.h, ../../Typedefs/itkBSplineExponentialDiffeomorphicTransformSwigInterface.h, ../../Typedefs/itkBSplineSmoothingOnUpdateDisplacementFieldTransformSwigInterface.h, ../../Typedefs/itkConstantVelocityFieldTransformSwigInterface.h, ../../Typedefs/itkDisplacementFieldJacobianDeterminantFilterSwigInterface.h, ../../Typedefs/itkDisplacementFieldTransformSwigInterface.h, ../../Typedefs/itkGaussianExponentialDiffeomorphicTransformSwigInterface.h, ../../Typedefs/itkGaussianSmoothingOnUpdateDisplacementFieldTransformSwigInterface.h, ../../Typedefs/itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransformSwigInterface.h, ../../Typedefs/itkVelocityFieldTransformSwigInterface.h, ../../Typedefs/itkTimeVaryingVelocityFieldTransform.idx, ../../Typedefs/itkBSplineExponentialDiffeomorphicTransform.idx, ../../Typedefs/itkBSplineSmoothingOnUpdateDisplacementFieldTransform.idx, ../../Typedefs/itkConstantVelocityFieldTransform.idx, ../../Typedefs/itkDisplacementFieldJacobianDeterminantFilter.idx, ../../Typedefs/itkDisplacementFieldTransform.idx, ../../Typedefs/itkGaussianExponentialDiffeomorphicTransform.idx, ../../Typedefs/itkGaussianSmoothingOnUpdateDisplacementFieldTransform.idx, ../../Typedefs/itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform.idx, ../../Typedefs/itkVelocityFieldTransform.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAddImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAddImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkAndImageFilterPython.cpp, ../../../lib/itkAndImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGradient.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKSmoothing.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkDifferenceOfGaussiansGradientImageFilter;itkGradientImageFilter;itkGradientMagnitudeImageFilter;itkGradientMagnitudeRecursiveGaussianImageFilter;itkGradientRecursiveGaussianImageFilter;itkVectorGradientMagnitudeImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKImageGradientSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelPython.dir/build.make Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkBinaryContourImageFilterPython.cpp, ../../../lib/itkBinaryContourImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKDisplacementField.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkTimeVaryingVelocityFieldTransform;itkBSplineExponentialDiffeomorphicTransform;itkBSplineSmoothingOnUpdateDisplacementFieldTransform;itkConstantVelocityFieldTransform;itkDisplacementFieldJacobianDeterminantFilter;itkDisplacementFieldTransform;itkGaussianExponentialDiffeomorphicTransform;itkGaussianSmoothingOnUpdateDisplacementFieldTransform;itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform;itkVelocityFieldTransform" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKDisplacementFieldSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandPython.dir/build.make Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ITKNarrowBandBasePython.cpp, ../../../lib/ITKNarrowBandBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKNarrowBand/ITKNarrowBandBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKNarrowBandBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkNarrowBandImageFilterBasePython.cpp, ../../../lib/itkNarrowBandImageFilterBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKThresholding.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageStatistics.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkHistogramThresholdCalculator;itkHistogramThresholdImageFilter;itkBinaryThresholdImageFilter;itkBinaryThresholdProjectionImageFilter;itkHuangThresholdCalculator;itkHuangThresholdImageFilter;itkIntermodesThresholdCalculator;itkIntermodesThresholdImageFilter;itkIsoDataThresholdCalculator;itkIsoDataThresholdImageFilter;itkKappaSigmaThresholdImageFilter;itkKittlerIllingworthThresholdCalculator;itkKittlerIllingworthThresholdImageFilter;itkLiThresholdCalculator;itkLiThresholdImageFilter;itkMaximumEntropyThresholdCalculator;itkMaximumEntropyThresholdImageFilter;itkMomentsThresholdCalculator;itkMomentsThresholdImageFilter;itkOtsuMultipleThresholdsImageFilter;itkOtsuThresholdCalculator;itkOtsuThresholdImageFilter;itkRenyiEntropyThresholdCalculator;itkRenyiEntropyThresholdImageFilter;itkShanbhagThresholdCalculator;itkShanbhagThresholdImageFilter;itkThresholdImageFilter;itkThresholdLabelerImageFilter;itkTriangleThresholdCalculator;itkTriangleThresholdImageFilter;itkYenThresholdCalculator;itkYenThresholdImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKThresholdingSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageComparePython.dir/build.make Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageComparePython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkAbsoluteValueDifferenceImageFilterPython.cpp, ../../../lib/itkAbsoluteValueDifferenceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkSumProjectionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSumProjectionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ITKImageStatisticsPython.cpp, ../../../lib/ITKImageStatisticsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageStatistics/ITKImageStatisticsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageStatistics.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageStatistics/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageStatistics /<>/BUILD/Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageStatisticsPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/build.make Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/ITKImageStatisticsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/ITKImageStatisticsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/ITKImageStatisticsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkAccumulateImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkZeroFluxNeumannPadImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkZeroFluxNeumannPadImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ITKImageGridPython.cpp, ../../../lib/ITKImageGridPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGrid/ITKImageGridPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageGrid/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageGrid /<>/BUILD/Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageGridPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/build.make Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/ITKImageGridPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/ITKImageGridPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/ITKImageGridPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkPadImageFilterBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkAccumulateImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkAccumulateImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkAdaptiveHistogramEqualizationImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkAdaptiveHistogramEqualizationImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkAdaptiveHistogramEqualizationImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkBinaryProjectionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/itkVectorCurvatureAnisotropicDiffusionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorCurvatureAnisotropicDiffusionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkImageMomentsCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkPadImageFilterBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkPadImageFilterBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkPadImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkImageMomentsCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkImageMomentsCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkImagePCAShapeModelEstimatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkBinaryProjectionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkBinaryProjectionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkImageShapeModelEstimatorBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkImageShapeModelEstimatorBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkImageShapeModelEstimatorBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkLabelStatisticsImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkImagePCAShapeModelEstimatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkImagePCAShapeModelEstimatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkMaximumProjectionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkMaximumProjectionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkMaximumProjectionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkMeanProjectionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkPadImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkPadImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkBSplineDownsampleImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkLabelStatisticsImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkLabelStatisticsImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkMedianProjectionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/itkVectorGradientAnisotropicDiffusionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorGradientAnisotropicDiffusionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ITKAnisotropicSmoothingPython.cpp, ../../../lib/ITKAnisotropicSmoothingPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/ITKAnisotropicSmoothingPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKAnisotropicSmoothing.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/AnisotropicSmoothing/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAnisotropicSmoothingPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingPython.dir/build.make Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingPython.dir/ITKAnisotropicSmoothingPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/c++ -DITKAnisotropicSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/AnisotropicSmoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKAnisotropicSmoothingPython.dir/ITKAnisotropicSmoothingPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/ITKAnisotropicSmoothingPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkAnisotropicDiffusionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkBSplineDownsampleImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkBSplineDownsampleImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkBSplineUpsampleImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkMeanProjectionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkMeanProjectionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientPython.dir/build.make Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkDifferenceOfGaussiansGradientImageFilterPython.cpp, ../../../lib/itkDifferenceOfGaussiansGradientImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAndImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAndImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkAsinImageFilterPython.cpp, ../../../lib/itkAsinImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/c++ -DITKAnisotropicSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/AnisotropicSmoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkAnisotropicDiffusionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/itkAnisotropicDiffusionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkCurvatureAnisotropicDiffusionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageLabel/itkBinaryContourImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryContourImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkChangeLabelImageFilterPython.cpp, ../../../lib/itkChangeLabelImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkMedianProjectionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkMedianProjectionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkMinimumMaximumImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkBSplineUpsampleImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkBSplineUpsampleImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkBinShrinkImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkMinimumMaximumImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkMinimumMaximumImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkMinimumProjectionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/c++ -DITKAnisotropicSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/AnisotropicSmoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkCurvatureAnisotropicDiffusionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/itkCurvatureAnisotropicDiffusionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkGradientAnisotropicDiffusionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKNarrowBand/itkNarrowBandImageFilterBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNarrowBandImageFilterBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ITKNarrowBandPython.cpp, ../../../lib/ITKNarrowBandPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKNarrowBand/ITKNarrowBandPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKNarrowBand.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/NarrowBand/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKNarrowBand /<>/BUILD/Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKNarrowBandPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandPython.dir/build.make Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandPython.dir/ITKNarrowBandPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKNarrowBand && /usr/bin/c++ -DITKNarrowBandPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/NarrowBand/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKNarrowBandPython.dir/ITKNarrowBandPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKNarrowBand/ITKNarrowBandPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandPython.dir/ITKNarrowBandBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkBinShrinkImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkBinShrinkImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkChangeInformationImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKNarrowBand && /usr/bin/c++ -DITKNarrowBandPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/NarrowBand/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKNarrowBandPython.dir/ITKNarrowBandBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKNarrowBand/ITKNarrowBandBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKNarrowBand/CMakeFiles/ITKNarrowBandPython.dir/itkNarrowBandImageFilterBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKNarrowBand && /usr/bin/c++ -DITKNarrowBandPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/NarrowBand/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKNarrowBandPython.dir/itkNarrowBandImageFilterBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKNarrowBand/itkNarrowBandImageFilterBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Linking CXX shared module ../../../lib/_ITKNarrowBandPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkMinimumProjectionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkMinimumProjectionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkStandardDeviationProjectionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKNarrowBand && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKNarrowBandPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKNarrowBandPython.so CMakeFiles/ITKNarrowBandPython.dir/ITKNarrowBandPython.cpp.o CMakeFiles/ITKNarrowBandPython.dir/ITKNarrowBandBasePython.cpp.o CMakeFiles/ITKNarrowBandPython.dir/itkNarrowBandImageFilterBasePython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKNarrowBandPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeatureSwig.dir/build.make Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeatureSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFeature/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageFeature /<>/BUILD/Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeatureSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFeatureSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeatureSwig.dir/build.make Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeatureSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ../../Typedefs/itkHessianRecursiveGaussianImageFilter.i, ../../Typedefs/itkBilateralImageFilter.i, ../../Typedefs/itkCannyEdgeDetectionImageFilter.i, ../../Typedefs/itkDerivativeImageFilter.i, ../../Typedefs/itkGradientVectorFlowImageFilter.i, ../../Typedefs/itkHessian3DToVesselnessMeasureImageFilter.i, ../../Typedefs/itkHessianToObjectnessMeasureImageFilter.i, ../../Typedefs/itkHoughTransform2DCirclesImageFilter.i, ../../Typedefs/itkHoughTransform2DLinesImageFilter.i, ../../Typedefs/itkLaplacianImageFilter.i, ../../Typedefs/itkLaplacianRecursiveGaussianImageFilter.i, ../../Typedefs/itkLaplacianSharpeningImageFilter.i, ../../Typedefs/itkMaskFeaturePointSelectionFilter.i, ../../Typedefs/itkSimpleContourExtractorImageFilter.i, ../../Typedefs/itkSobelEdgeDetectionImageFilter.i, ../../Typedefs/itkUnsharpMaskImageFilter.i, ../../Typedefs/itkZeroCrossingBasedEdgeDetectionImageFilter.i, ../../Typedefs/itkZeroCrossingImageFilter.i, ../../Typedefs/itkHessianRecursiveGaussianImageFilterSwigInterface.h, ../../Typedefs/itkBilateralImageFilterSwigInterface.h, ../../Typedefs/itkCannyEdgeDetectionImageFilterSwigInterface.h, ../../Typedefs/itkDerivativeImageFilterSwigInterface.h, ../../Typedefs/itkGradientVectorFlowImageFilterSwigInterface.h, ../../Typedefs/itkHessian3DToVesselnessMeasureImageFilterSwigInterface.h, ../../Typedefs/itkHessianToObjectnessMeasureImageFilterSwigInterface.h, ../../Typedefs/itkHoughTransform2DCirclesImageFilterSwigInterface.h, ../../Typedefs/itkHoughTransform2DLinesImageFilterSwigInterface.h, ../../Typedefs/itkLaplacianImageFilterSwigInterface.h, ../../Typedefs/itkLaplacianRecursiveGaussianImageFilterSwigInterface.h, ../../Typedefs/itkLaplacianSharpeningImageFilterSwigInterface.h, ../../Typedefs/itkMaskFeaturePointSelectionFilterSwigInterface.h, ../../Typedefs/itkSimpleContourExtractorImageFilterSwigInterface.h, ../../Typedefs/itkSobelEdgeDetectionImageFilterSwigInterface.h, ../../Typedefs/itkUnsharpMaskImageFilterSwigInterface.h, ../../Typedefs/itkZeroCrossingBasedEdgeDetectionImageFilterSwigInterface.h, ../../Typedefs/itkZeroCrossingImageFilterSwigInterface.h, ../../Typedefs/itkHessianRecursiveGaussianImageFilter.idx, ../../Typedefs/itkBilateralImageFilter.idx, ../../Typedefs/itkCannyEdgeDetectionImageFilter.idx, ../../Typedefs/itkDerivativeImageFilter.idx, ../../Typedefs/itkGradientVectorFlowImageFilter.idx, ../../Typedefs/itkHessian3DToVesselnessMeasureImageFilter.idx, ../../Typedefs/itkHessianToObjectnessMeasureImageFilter.idx, ../../Typedefs/itkHoughTransform2DCirclesImageFilter.idx, ../../Typedefs/itkHoughTransform2DLinesImageFilter.idx, ../../Typedefs/itkLaplacianImageFilter.idx, ../../Typedefs/itkLaplacianRecursiveGaussianImageFilter.idx, ../../Typedefs/itkLaplacianSharpeningImageFilter.idx, ../../Typedefs/itkMaskFeaturePointSelectionFilter.idx, ../../Typedefs/itkSimpleContourExtractorImageFilter.idx, ../../Typedefs/itkSobelEdgeDetectionImageFilter.idx, ../../Typedefs/itkUnsharpMaskImageFilter.idx, ../../Typedefs/itkZeroCrossingBasedEdgeDetectionImageFilter.idx, ../../Typedefs/itkZeroCrossingImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/c++ -DITKAnisotropicSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/AnisotropicSmoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkGradientAnisotropicDiffusionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/itkGradientAnisotropicDiffusionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkVectorCurvatureAnisotropicDiffusionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkChangeInformationImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkChangeInformationImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkConstantPadImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFeature.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGradient.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageSources.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageStatistics.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKMesh.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKSmoothing.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkHessianRecursiveGaussianImageFilter;itkBilateralImageFilter;itkCannyEdgeDetectionImageFilter;itkDerivativeImageFilter;itkGradientVectorFlowImageFilter;itkHessian3DToVesselnessMeasureImageFilter;itkHessianToObjectnessMeasureImageFilter;itkHoughTransform2DCirclesImageFilter;itkHoughTransform2DLinesImageFilter;itkLaplacianImageFilter;itkLaplacianRecursiveGaussianImageFilter;itkLaplacianSharpeningImageFilter;itkMaskFeaturePointSelectionFilter;itkSimpleContourExtractorImageFilter;itkSobelEdgeDetectionImageFilter;itkUnsharpMaskImageFilter;itkZeroCrossingBasedEdgeDetectionImageFilter;itkZeroCrossingImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKImageFeatureSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionPython.dir/build.make Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkN4BiasFieldCorrectionImageFilterPython.cpp, ../../../lib/itkN4BiasFieldCorrectionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkStandardDeviationProjectionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkStandardDeviationProjectionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkStatisticsImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGradient/itkDifferenceOfGaussiansGradientImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDifferenceOfGaussiansGradientImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkGradientImageFilterPython.cpp, ../../../lib/itkGradientImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkStatisticsImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkStatisticsImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageStatistics/CMakeFiles/ITKImageStatisticsPython.dir/itkSumProjectionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/c++ -DITKImageStatisticsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageStatistics/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageStatisticsPython.dir/itkSumProjectionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageStatistics/itkSumProjectionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Linking CXX shared module ../../../lib/_ITKImageStatisticsPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBiasCorrection/itkN4BiasFieldCorrectionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkN4BiasFieldCorrectionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ITKBiasCorrectionPython.cpp, ../../../lib/ITKBiasCorrectionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBiasCorrection/ITKBiasCorrectionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKBiasCorrection.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BiasCorrection/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKBiasCorrection /<>/BUILD/Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBiasCorrectionPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionPython.dir/build.make Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionPython.dir/ITKBiasCorrectionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageStatistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageStatisticsPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageStatisticsPython.so CMakeFiles/ITKImageStatisticsPython.dir/ITKImageStatisticsPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkAccumulateImageFilterPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkAdaptiveHistogramEqualizationImageFilterPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkBinaryProjectionImageFilterPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkImageMomentsCalculatorPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkImagePCAShapeModelEstimatorPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkImageShapeModelEstimatorBasePython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkLabelStatisticsImageFilterPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkMaximumProjectionImageFilterPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkMeanProjectionImageFilterPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkMedianProjectionImageFilterPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkMinimumMaximumImageFilterPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkMinimumProjectionImageFilterPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkStandardDeviationProjectionImageFilterPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkStatisticsImageFilterPython.cpp.o CMakeFiles/ITKImageStatisticsPython.dir/itkSumProjectionImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKImageStatisticsPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionSwig.dir/build.make Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Convolution/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKConvolution /<>/BUILD/Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKConvolutionSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionSwig.dir/build.make Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionSwig.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBiasCorrection && /usr/bin/c++ -DITKBiasCorrectionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BiasCorrection/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBiasCorrectionPython.dir/ITKBiasCorrectionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBiasCorrection/ITKBiasCorrectionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKBiasCorrection/CMakeFiles/ITKBiasCorrectionPython.dir/itkN4BiasFieldCorrectionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ../../Typedefs/itkConvolutionImageFilterBase.i, ../../Typedefs/itkConvolutionImageFilter.i, ../../Typedefs/itkFFTConvolutionImageFilter.i, ../../Typedefs/itkFFTNormalizedCorrelationImageFilter.i, ../../Typedefs/itkMaskedFFTNormalizedCorrelationImageFilter.i, ../../Typedefs/itkConvolutionImageFilterBaseSwigInterface.h, ../../Typedefs/itkConvolutionImageFilterSwigInterface.h, ../../Typedefs/itkFFTConvolutionImageFilterSwigInterface.h, ../../Typedefs/itkFFTNormalizedCorrelationImageFilterSwigInterface.h, ../../Typedefs/itkMaskedFFTNormalizedCorrelationImageFilterSwigInterface.h, ../../Typedefs/itkConvolutionImageFilterBase.idx, ../../Typedefs/itkConvolutionImageFilter.idx, ../../Typedefs/itkFFTConvolutionImageFilter.idx, ../../Typedefs/itkFFTNormalizedCorrelationImageFilter.idx, ../../Typedefs/itkMaskedFFTNormalizedCorrelationImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKConvolution.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKFFT.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKThresholding.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkConvolutionImageFilterBase;itkConvolutionImageFilter;itkFFTConvolutionImageFilter;itkFFTNormalizedCorrelationImageFilter;itkMaskedFFTNormalizedCorrelationImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKConvolutionSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/build.make Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkTimeVaryingVelocityFieldTransformPython.cpp, ../../../lib/itkTimeVaryingVelocityFieldTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkConstantPadImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkConstantPadImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkCropImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/c++ -DITKAnisotropicSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/AnisotropicSmoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkVectorCurvatureAnisotropicDiffusionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/itkVectorCurvatureAnisotropicDiffusionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKAnisotropicSmoothing/CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkVectorGradientAnisotropicDiffusionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkTimeVaryingVelocityFieldTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTimeVaryingVelocityFieldTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkBSplineExponentialDiffeomorphicTransformPython.cpp, ../../../lib/itkBSplineExponentialDiffeomorphicTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkBSplineExponentialDiffeomorphicTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBSplineExponentialDiffeomorphicTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkBSplineSmoothingOnUpdateDisplacementFieldTransformPython.cpp, ../../../lib/itkBSplineSmoothingOnUpdateDisplacementFieldTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkBSplineSmoothingOnUpdateDisplacementFieldTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBSplineSmoothingOnUpdateDisplacementFieldTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkConstantVelocityFieldTransformPython.cpp, ../../../lib/itkConstantVelocityFieldTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkConstantVelocityFieldTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkConstantVelocityFieldTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkDisplacementFieldJacobianDeterminantFilterPython.cpp, ../../../lib/itkDisplacementFieldJacobianDeterminantFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAsinImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAsinImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkAtan2ImageFilterPython.cpp, ../../../lib/itkAtan2ImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageLabel/itkChangeLabelImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkChangeLabelImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkLabelContourImageFilterPython.cpp, ../../../lib/itkLabelContourImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGradient/itkGradientImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGradientImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkGradientMagnitudeImageFilterPython.cpp, ../../../lib/itkGradientMagnitudeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkCropImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkCropImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkCyclicShiftImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/c++ -DITKAnisotropicSmoothingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/AnisotropicSmoothing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkVectorGradientAnisotropicDiffusionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing/itkVectorGradientAnisotropicDiffusionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Linking CXX shared module ../../../lib/_ITKAnisotropicSmoothingPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAnisotropicSmoothing && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKAnisotropicSmoothingPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKAnisotropicSmoothingPython.so CMakeFiles/ITKAnisotropicSmoothingPython.dir/ITKAnisotropicSmoothingPython.cpp.o CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkAnisotropicDiffusionImageFilterPython.cpp.o CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkCurvatureAnisotropicDiffusionImageFilterPython.cpp.o CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkGradientAnisotropicDiffusionImageFilterPython.cpp.o CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkVectorCurvatureAnisotropicDiffusionImageFilterPython.cpp.o CMakeFiles/ITKAnisotropicSmoothingPython.dir/itkVectorGradientAnisotropicDiffusionImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 89%] Built target ITKAnisotropicSmoothingPython make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkExpandImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGradient/itkGradientMagnitudeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGradientMagnitudeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkGradientMagnitudeRecursiveGaussianImageFilterPython.cpp, ../../../lib/itkGradientMagnitudeRecursiveGaussianImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkExpandImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkExpandImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkFlipImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkCyclicShiftImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkCyclicShiftImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkInterpolateImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkFlipImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkFlipImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkMirrorPadImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkInterpolateImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkInterpolateImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkOrientImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBiasCorrection && /usr/bin/c++ -DITKBiasCorrectionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BiasCorrection/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBiasCorrectionPython.dir/itkN4BiasFieldCorrectionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBiasCorrection/itkN4BiasFieldCorrectionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Linking CXX shared module ../../../lib/_ITKBiasCorrectionPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBiasCorrection && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKBiasCorrectionPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKBiasCorrectionPython.so CMakeFiles/ITKBiasCorrectionPython.dir/ITKBiasCorrectionPython.cpp.o CMakeFiles/ITKBiasCorrectionPython.dir/itkN4BiasFieldCorrectionImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkDisplacementFieldJacobianDeterminantFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDisplacementFieldJacobianDeterminantFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkDisplacementFieldTransformPython.cpp, ../../../lib/itkDisplacementFieldTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkDisplacementFieldTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDisplacementFieldTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkGaussianExponentialDiffeomorphicTransformPython.cpp, ../../../lib/itkGaussianExponentialDiffeomorphicTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkGaussianExponentialDiffeomorphicTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGaussianExponentialDiffeomorphicTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkGaussianSmoothingOnUpdateDisplacementFieldTransformPython.cpp, ../../../lib/itkGaussianSmoothingOnUpdateDisplacementFieldTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkOrientImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkOrientImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkPasteImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkGaussianSmoothingOnUpdateDisplacementFieldTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGaussianSmoothingOnUpdateDisplacementFieldTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransformPython.cpp, ../../../lib/itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkMirrorPadImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkMirrorPadImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkPermuteAxesImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkPasteImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkPasteImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkRegionOfInterestImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkVelocityFieldTransformPython.cpp, ../../../lib/itkVelocityFieldTransformPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkPermuteAxesImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkPermuteAxesImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkResampleImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkVelocityFieldTransformPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVelocityFieldTransform.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ITKDisplacementFieldPython.cpp, ../../../lib/ITKDisplacementFieldPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDisplacementField/ITKDisplacementFieldPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKDisplacementField.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkRegionOfInterestImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkRegionOfInterestImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkShrinkImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DisplacementField/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKDisplacementField /<>/BUILD/Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDisplacementFieldPython make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkShrinkImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkShrinkImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkSliceBySliceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkSliceBySliceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkSliceBySliceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkTileImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageLabel/itkLabelContourImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelContourImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ITKImageLabelPython.cpp, ../../../lib/ITKImageLabelPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageLabel/ITKImageLabelPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageLabel.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageLabel/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageLabel /<>/BUILD/Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageLabelPython make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAtan2ImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAtan2ImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkAtanImageFilterPython.cpp, ../../../lib/itkAtanImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkTileImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkTileImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkVectorResampleImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGradient/itkGradientMagnitudeRecursiveGaussianImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGradientMagnitudeRecursiveGaussianImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkGradientRecursiveGaussianImageFilterPython.cpp, ../../../lib/itkGradientRecursiveGaussianImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkResampleImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkResampleImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkVectorGradientMagnitudeImageFilterPython.cpp, ../../../lib/itkVectorGradientMagnitudeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkVectorResampleImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkVectorResampleImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkWarpImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkWarpImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkWarpImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkWrapPadImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGradient/itkVectorGradientMagnitudeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorGradientMagnitudeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Building CXX object Wrapping/Modules/ITKImageGrid/CMakeFiles/ITKImageGridPython.dir/itkZeroFluxNeumannPadImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkWrapPadImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkWrapPadImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating itkBinaryMagnitudeImageFilterPython.cpp, ../../../lib/itkBinaryMagnitudeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGradient/itkGradientRecursiveGaussianImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGradientRecursiveGaussianImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 89%] Generating ITKImageGradientPython.cpp, ../../../lib/ITKImageGradientPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageGradient/ITKImageGradientPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageGradient.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageGradient/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageGradient /<>/BUILD/Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageGradientPython make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAtanImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAtanImageFilter.i make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonSwig.dir/build.make Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonSwig.dir/depend make -f Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelPython.dir/build.make Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelPython.dir/build make -f Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientPython.dir/build.make Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientPython.dir/build make -f Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/build.make Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/build make[2]: Entering directory '/<>/BUILD' [ 90%] Built target ITKBiasCorrectionPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBaseSwig.dir/build.make Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBaseSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Common/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationCommonSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonSwig.dir/build.make Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 90%] Building CXX object Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientPython.dir/ITKImageGradientPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 90%] Building CXX object Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelPython.dir/ITKImageLabelPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformBase/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOTransformBase /<>/BUILD/Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBaseSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformBaseSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBaseSwig.dir/build.make Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBaseSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 90%] Generating ../../Typedefs/itkBlockMatchingImageFilter.i, ../../Typedefs/itkCenteredTransformInitializer.i, ../../Typedefs/itkCenteredVersorTransformInitializer.i, ../../Typedefs/itkImageRegistrationMethod.i, ../../Typedefs/itkImageToImageMetric.i, ../../Typedefs/itkLandmarkBasedTransformInitializer.i, ../../Typedefs/itkMattesMutualInformationImageToImageMetric.i, ../../Typedefs/itkMeanReciprocalSquareDifferenceImageToImageMetric.i, ../../Typedefs/itkMeanSquaresImageToImageMetric.i, ../../Typedefs/itkMultiResolutionImageRegistrationMethod.i, ../../Typedefs/itkMultiResolutionPyramidImageFilter.i, ../../Typedefs/itkMutualInformationImageToImageMetric.i, ../../Typedefs/itkNormalizedCorrelationImageToImageMetric.i, ../../Typedefs/itkPDEDeformableRegistrationFunction.i, ../../Typedefs/itkRecursiveMultiResolutionPyramidImageFilter.i, ../../Typedefs/itkTransformParametersAdaptorBase.i, ../../Typedefs/itkBlockMatchingImageFilterSwigInterface.h, ../../Typedefs/itkCenteredTransformInitializerSwigInterface.h, ../../Typedefs/itkCenteredVersorTransformInitializerSwigInterface.h, ../../Typedefs/itkImageRegistrationMethodSwigInterface.h, ../../Typedefs/itkImageToImageMetricSwigInterface.h, ../../Typedefs/itkLandmarkBasedTransformInitializerSwigInterface.h, ../../Typedefs/itkMattesMutualInformationImageToImageMetricSwigInterface.h, ../../Typedefs/itkMeanReciprocalSquareDifferenceImageToImageMetricSwigInterface.h, ../../Typedefs/itkMeanSquaresImageToImageMetricSwigInterface.h, ../../Typedefs/itkMultiResolutionImageRegistrationMethodSwigInterface.h, ../../Typedefs/itkMultiResolutionPyramidImageFilterSwigInterface.h, ../../Typedefs/itkMutualInformationImageToImageMetricSwigInterface.h, ../../Typedefs/itkNormalizedCorrelationImageToImageMetricSwigInterface.h, ../../Typedefs/itkPDEDeformableRegistrationFunctionSwigInterface.h, ../../Typedefs/itkRecursiveMultiResolutionPyramidImageFilterSwigInterface.h, ../../Typedefs/itkTransformParametersAdaptorBaseSwigInterface.h, ../../Typedefs/itkBlockMatchingImageFilter.idx, ../../Typedefs/itkCenteredTransformInitializer.idx, ../../Typedefs/itkCenteredVersorTransformInitializer.idx, ../../Typedefs/itkImageRegistrationMethod.idx, ../../Typedefs/itkImageToImageMetric.idx, ../../Typedefs/itkLandmarkBasedTransformInitializer.idx, ../../Typedefs/itkMattesMutualInformationImageToImageMetric.idx, ../../Typedefs/itkMeanReciprocalSquareDifferenceImageToImageMetric.idx, ../../Typedefs/itkMeanSquaresImageToImageMetric.idx, ../../Typedefs/itkMultiResolutionImageRegistrationMethod.idx, ../../Typedefs/itkMultiResolutionPyramidImageFilter.idx, ../../Typedefs/itkMutualInformationImageToImageMetric.idx, ../../Typedefs/itkNormalizedCorrelationImageToImageMetric.idx, ../../Typedefs/itkPDEDeformableRegistrationFunction.idx, ../../Typedefs/itkRecursiveMultiResolutionPyramidImageFilter.idx, ../../Typedefs/itkTransformParametersAdaptorBase.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 90%] Generating ../../Typedefs/itkTransformFileReader.i, ../../Typedefs/itkTransformFileWriter.i, ../../Typedefs/itkTransformIOBaseTemplate.i, ../../Typedefs/itkTransformFileReaderSwigInterface.h, ../../Typedefs/itkTransformFileWriterSwigInterface.h, ../../Typedefs/itkTransformIOBaseTemplateSwigInterface.h, ../../Typedefs/itkTransformFileReader.idx, ../../Typedefs/itkTransformFileWriter.idx, ../../Typedefs/itkTransformIOBaseTemplate.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 90%] Building CXX object Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/ITKDisplacementFieldPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageLabel && /usr/bin/c++ -DITKImageLabelPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageLabel/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageLabelPython.dir/ITKImageLabelPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageLabel/ITKImageLabelPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 90%] Building CXX object Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelPython.dir/itkBinaryContourImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/c++ -DITKImageGradientPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGradient/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGradientPython.dir/ITKImageGradientPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGradient/ITKImageGradientPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/c++ -DITKDisplacementFieldPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DisplacementField/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDisplacementFieldPython.dir/ITKDisplacementFieldPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDisplacementField/ITKDisplacementFieldPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 90%] Building CXX object Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientPython.dir/itkDifferenceOfGaussiansGradientImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 90%] Building CXX object Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/itkTimeVaryingVelocityFieldTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTransformBase && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOTransformBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKDisplacementField.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKTransform.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkTransformFileReader;itkTransformFileWriter;itkTransformIOBaseTemplate" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 90%] Built target ITKIOTransformBaseSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingSwig.dir/build.make Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LabelVoting/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKLabelVoting /<>/BUILD/Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelVotingSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingSwig.dir/build.make Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 90%] Generating ../../Typedefs/itkVotingBinaryImageFilter.i, ../../Typedefs/itkBinaryMedianImageFilter.i, ../../Typedefs/itkLabelVotingImageFilter.i, ../../Typedefs/itkVotingBinaryHoleFillingImageFilter.i, ../../Typedefs/itkVotingBinaryIterativeHoleFillingImageFilter.i, ../../Typedefs/itkVotingBinaryImageFilterSwigInterface.h, ../../Typedefs/itkBinaryMedianImageFilterSwigInterface.h, ../../Typedefs/itkLabelVotingImageFilterSwigInterface.h, ../../Typedefs/itkVotingBinaryHoleFillingImageFilterSwigInterface.h, ../../Typedefs/itkVotingBinaryIterativeHoleFillingImageFilterSwigInterface.h, ../../Typedefs/itkVotingBinaryImageFilter.idx, ../../Typedefs/itkBinaryMedianImageFilter.idx, ../../Typedefs/itkLabelVotingImageFilter.idx, ../../Typedefs/itkVotingBinaryHoleFillingImageFilter.idx, ../../Typedefs/itkVotingBinaryIterativeHoleFillingImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/c++ -DITKImageGridPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGrid/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGridPython.dir/itkZeroFluxNeumannPadImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGrid/itkZeroFluxNeumannPadImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 90%] Linking CXX shared module ../../../lib/_ITKImageGridPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKLabelVoting.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKThresholding.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkVotingBinaryImageFilter;itkBinaryMedianImageFilter;itkLabelVotingImageFilter;itkVotingBinaryHoleFillingImageFilter;itkVotingBinaryIterativeHoleFillingImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 90%] Built target ITKLabelVotingSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingSwig.dir/build.make Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/RegionGrowing/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKRegionGrowing /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegionGrowingSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingSwig.dir/build.make Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 90%] Generating ../../Typedefs/itkConfidenceConnectedImageFilter.i, ../../Typedefs/itkConnectedThresholdImageFilter.i, ../../Typedefs/itkIsolatedConnectedImageFilter.i, ../../Typedefs/itkNeighborhoodConnectedImageFilter.i, ../../Typedefs/itkVectorConfidenceConnectedImageFilter.i, ../../Typedefs/itkConfidenceConnectedImageFilterSwigInterface.h, ../../Typedefs/itkConnectedThresholdImageFilterSwigInterface.h, ../../Typedefs/itkIsolatedConnectedImageFilterSwigInterface.h, ../../Typedefs/itkNeighborhoodConnectedImageFilterSwigInterface.h, ../../Typedefs/itkVectorConfidenceConnectedImageFilterSwigInterface.h, ../../Typedefs/itkConfidenceConnectedImageFilter.idx, ../../Typedefs/itkConnectedThresholdImageFilter.idx, ../../Typedefs/itkIsolatedConnectedImageFilter.idx, ../../Typedefs/itkNeighborhoodConnectedImageFilter.idx, ../../Typedefs/itkVectorConfidenceConnectedImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGrid && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageGridPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageGridPython.so CMakeFiles/ITKImageGridPython.dir/ITKImageGridPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkPadImageFilterBasePython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkPadImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkBSplineDownsampleImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkBSplineUpsampleImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkBinShrinkImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkChangeInformationImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkConstantPadImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkCropImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkCyclicShiftImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkExpandImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkFlipImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkInterpolateImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkMirrorPadImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkOrientImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkPasteImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkPermuteAxesImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkRegionOfInterestImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkResampleImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkShrinkImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkSliceBySliceImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkTileImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkVectorResampleImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkWarpImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkWrapPadImageFilterPython.cpp.o CMakeFiles/ITKImageGridPython.dir/itkZeroFluxNeumannPadImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 90%] Built target ITKImageGridPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Swig.dir/build.make Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Swig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizersv4/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Swig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizersv4Swig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Swig.dir/build.make Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Swig.dir/build make[3]: Entering directory '/<>/BUILD' [ 90%] Generating ../../Typedefs/itkGradientDescentOptimizerBasev4.i, ../../Typedefs/itkGradientDescentOptimizerv4.i, ../../Typedefs/itkObjectToObjectMetric.i, ../../Typedefs/itkObjectToObjectMetricBase.i, ../../Typedefs/itkObjectToObjectOptimizerBase.i, ../../Typedefs/itkOptimizerParameterScalesEstimator.i, ../../Typedefs/itkQuasiNewtonOptimizerv4.i, ../../Typedefs/itkRegularStepGradientDescentOptimizerv4.i, ../../Typedefs/itkSingleValuedCostFunctionv4.i, ../../Typedefs/itkGradientDescentOptimizerBasev4SwigInterface.h, ../../Typedefs/itkGradientDescentOptimizerv4SwigInterface.h, ../../Typedefs/itkObjectToObjectMetricSwigInterface.h, ../../Typedefs/itkObjectToObjectMetricBaseSwigInterface.h, ../../Typedefs/itkObjectToObjectOptimizerBaseSwigInterface.h, ../../Typedefs/itkOptimizerParameterScalesEstimatorSwigInterface.h, ../../Typedefs/itkQuasiNewtonOptimizerv4SwigInterface.h, ../../Typedefs/itkRegularStepGradientDescentOptimizerv4SwigInterface.h, ../../Typedefs/itkSingleValuedCostFunctionv4SwigInterface.h, ../../Typedefs/itkGradientDescentOptimizerBasev4.idx, ../../Typedefs/itkGradientDescentOptimizerv4.idx, ../../Typedefs/itkObjectToObjectMetric.idx, ../../Typedefs/itkObjectToObjectMetricBase.idx, ../../Typedefs/itkObjectToObjectOptimizerBase.idx, ../../Typedefs/itkOptimizerParameterScalesEstimator.idx, ../../Typedefs/itkQuasiNewtonOptimizerv4.idx, ../../Typedefs/itkRegularStepGradientDescentOptimizerv4.idx, ../../Typedefs/itkSingleValuedCostFunctionv4.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/c++ -DITKDisplacementFieldPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DisplacementField/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDisplacementFieldPython.dir/itkTimeVaryingVelocityFieldTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkTimeVaryingVelocityFieldTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 90%] Building CXX object Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/itkBSplineExponentialDiffeomorphicTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKOptimizersv4.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKDisplacementField.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKOptimizers.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKTransform.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkGradientDescentOptimizerBasev4;itkGradientDescentOptimizerv4;itkObjectToObjectMetric;itkObjectToObjectMetricBase;itkObjectToObjectOptimizerBase;itkOptimizerParameterScalesEstimator;itkQuasiNewtonOptimizerv4;itkRegularStepGradientDescentOptimizerv4;itkSingleValuedCostFunctionv4" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 90%] Built target ITKOptimizersv4Swig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/build.make Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 90%] Generating itkHistogramThresholdCalculatorPython.cpp, ../../../lib/itkHistogramThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKRegionGrowing.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKThresholding.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkConfidenceConnectedImageFilter;itkConnectedThresholdImageFilter;itkIsolatedConnectedImageFilter;itkNeighborhoodConnectedImageFilter;itkVectorConfidenceConnectedImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 90%] Built target ITKRegionGrowingSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsSwig.dir/build.make Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/ConnectedComponents/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKConnectedComponents /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKConnectedComponentsSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsSwig.dir/build.make Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 90%] Generating ../../Typedefs/itkConnectedComponentImageFilter.i, ../../Typedefs/itkHardConnectedComponentImageFilter.i, ../../Typedefs/itkRelabelComponentImageFilter.i, ../../Typedefs/itkScalarConnectedComponentImageFilter.i, ../../Typedefs/itkThresholdMaximumConnectedComponentsImageFilter.i, ../../Typedefs/itkVectorConnectedComponentImageFilter.i, ../../Typedefs/itkConnectedComponentImageFilterSwigInterface.h, ../../Typedefs/itkHardConnectedComponentImageFilterSwigInterface.h, ../../Typedefs/itkRelabelComponentImageFilterSwigInterface.h, ../../Typedefs/itkScalarConnectedComponentImageFilterSwigInterface.h, ../../Typedefs/itkThresholdMaximumConnectedComponentsImageFilterSwigInterface.h, ../../Typedefs/itkVectorConnectedComponentImageFilterSwigInterface.h, ../../Typedefs/itkConnectedComponentImageFilter.idx, ../../Typedefs/itkHardConnectedComponentImageFilter.idx, ../../Typedefs/itkRelabelComponentImageFilter.idx, ../../Typedefs/itkScalarConnectedComponentImageFilter.idx, ../../Typedefs/itkThresholdMaximumConnectedComponentsImageFilter.idx, ../../Typedefs/itkVectorConnectedComponentImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkHistogramThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHistogramThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 90%] Generating itkHistogramThresholdImageFilterPython.cpp, ../../../lib/itkHistogramThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/c++ -DITKImageGradientPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGradient/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGradientPython.dir/itkDifferenceOfGaussiansGradientImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGradient/itkDifferenceOfGaussiansGradientImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 90%] Building CXX object Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientPython.dir/itkGradientImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKConnectedComponents.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKThresholding.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkConnectedComponentImageFilter;itkHardConnectedComponentImageFilter;itkRelabelComponentImageFilter;itkScalarConnectedComponentImageFilter;itkThresholdMaximumConnectedComponentsImageFilter;itkVectorConnectedComponentImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKConnectedComponentsSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/build.make Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkHessianRecursiveGaussianImageFilterPython.cpp, ../../../lib/itkHessianRecursiveGaussianImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageLabel && /usr/bin/c++ -DITKImageLabelPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageLabel/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageLabelPython.dir/itkBinaryContourImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageLabel/itkBinaryContourImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelPython.dir/itkChangeLabelImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/c++ -DITKDisplacementFieldPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DisplacementField/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDisplacementFieldPython.dir/itkBSplineExponentialDiffeomorphicTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkBSplineExponentialDiffeomorphicTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/itkBSplineSmoothingOnUpdateDisplacementFieldTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKRegistrationCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKDisplacementField.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKFiniteDifference.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFeature.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFunction.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGradient.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKOptimizers.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKSmoothing.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKSpatialObjects.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKStatistics.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkBlockMatchingImageFilter;itkCenteredTransformInitializer;itkCenteredVersorTransformInitializer;itkImageRegistrationMethod;itkImageToImageMetric;itkLandmarkBasedTransformInitializer;itkMattesMutualInformationImageToImageMetric;itkMeanReciprocalSquareDifferenceImageToImageMetric;itkMeanSquaresImageToImageMetric;itkMultiResolutionImageRegistrationMethod;itkMultiResolutionPyramidImageFilter;itkMutualInformationImageToImageMetric;itkNormalizedCorrelationImageToImageMetric;itkPDEDeformableRegistrationFunction;itkRecursiveMultiResolutionPyramidImageFilter;itkTransformParametersAdaptorBase" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKRegistrationCommonSwig make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageCompare/itkAbsoluteValueDifferenceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAbsoluteValueDifferenceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkCheckerBoardImageFilterPython.cpp, ../../../lib/itkCheckerBoardImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkBoundedReciprocalImageFilterPython.cpp, ../../../lib/itkBoundedReciprocalImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageLabel && /usr/bin/c++ -DITKImageLabelPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageLabel/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageLabelPython.dir/itkChangeLabelImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageLabel/itkChangeLabelImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageLabel/CMakeFiles/ITKImageLabelPython.dir/itkLabelContourImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/c++ -DITKImageGradientPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGradient/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGradientPython.dir/itkGradientImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGradient/itkGradientImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientPython.dir/itkGradientMagnitudeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/c++ -DITKDisplacementFieldPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DisplacementField/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDisplacementFieldPython.dir/itkBSplineSmoothingOnUpdateDisplacementFieldTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkBSplineSmoothingOnUpdateDisplacementFieldTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/itkConstantVelocityFieldTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/c++ -DITKDisplacementFieldPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DisplacementField/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDisplacementFieldPython.dir/itkConstantVelocityFieldTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkConstantVelocityFieldTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/itkDisplacementFieldJacobianDeterminantFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageLabel && /usr/bin/c++ -DITKImageLabelPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageLabel/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageLabelPython.dir/itkLabelContourImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageLabel/itkLabelContourImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Linking CXX shared module ../../../lib/_ITKImageLabelPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageLabel && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageLabelPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageLabelPython.so CMakeFiles/ITKImageLabelPython.dir/ITKImageLabelPython.cpp.o CMakeFiles/ITKImageLabelPython.dir/itkBinaryContourImageFilterPython.cpp.o CMakeFiles/ITKImageLabelPython.dir/itkChangeLabelImageFilterPython.cpp.o CMakeFiles/ITKImageLabelPython.dir/itkLabelContourImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkHistogramThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHistogramThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkBinaryThresholdImageFilterPython.cpp, ../../../lib/itkBinaryThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/c++ -DITKImageGradientPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGradient/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGradientPython.dir/itkGradientMagnitudeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGradient/itkGradientMagnitudeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientPython.dir/itkGradientMagnitudeRecursiveGaussianImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/c++ -DITKDisplacementFieldPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DisplacementField/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDisplacementFieldPython.dir/itkDisplacementFieldJacobianDeterminantFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkDisplacementFieldJacobianDeterminantFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/itkDisplacementFieldTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/c++ -DITKDisplacementFieldPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DisplacementField/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDisplacementFieldPython.dir/itkDisplacementFieldTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkDisplacementFieldTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/itkGaussianExponentialDiffeomorphicTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/c++ -DITKImageGradientPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGradient/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGradientPython.dir/itkGradientMagnitudeRecursiveGaussianImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGradient/itkGradientMagnitudeRecursiveGaussianImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientPython.dir/itkGradientRecursiveGaussianImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/c++ -DITKDisplacementFieldPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DisplacementField/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDisplacementFieldPython.dir/itkGaussianExponentialDiffeomorphicTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkGaussianExponentialDiffeomorphicTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/itkGaussianSmoothingOnUpdateDisplacementFieldTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkHessianRecursiveGaussianImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHessianRecursiveGaussianImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkBilateralImageFilterPython.cpp, ../../../lib/itkBilateralImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/c++ -DITKDisplacementFieldPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DisplacementField/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDisplacementFieldPython.dir/itkGaussianSmoothingOnUpdateDisplacementFieldTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkGaussianSmoothingOnUpdateDisplacementFieldTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/c++ -DITKDisplacementFieldPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DisplacementField/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDisplacementFieldPython.dir/itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKDisplacementField/CMakeFiles/ITKDisplacementFieldPython.dir/itkVelocityFieldTransformPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/c++ -DITKImageGradientPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGradient/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGradientPython.dir/itkGradientRecursiveGaussianImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGradient/itkGradientRecursiveGaussianImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageGradient/CMakeFiles/ITKImageGradientPython.dir/itkVectorGradientMagnitudeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/c++ -DITKDisplacementFieldPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DisplacementField/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDisplacementFieldPython.dir/itkVelocityFieldTransformPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDisplacementField/itkVelocityFieldTransformPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Linking CXX shared module ../../../lib/_ITKDisplacementFieldPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDisplacementField && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDisplacementFieldPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKDisplacementFieldPython.so CMakeFiles/ITKDisplacementFieldPython.dir/ITKDisplacementFieldPython.cpp.o CMakeFiles/ITKDisplacementFieldPython.dir/itkTimeVaryingVelocityFieldTransformPython.cpp.o CMakeFiles/ITKDisplacementFieldPython.dir/itkBSplineExponentialDiffeomorphicTransformPython.cpp.o CMakeFiles/ITKDisplacementFieldPython.dir/itkBSplineSmoothingOnUpdateDisplacementFieldTransformPython.cpp.o CMakeFiles/ITKDisplacementFieldPython.dir/itkConstantVelocityFieldTransformPython.cpp.o CMakeFiles/ITKDisplacementFieldPython.dir/itkDisplacementFieldJacobianDeterminantFilterPython.cpp.o CMakeFiles/ITKDisplacementFieldPython.dir/itkDisplacementFieldTransformPython.cpp.o CMakeFiles/ITKDisplacementFieldPython.dir/itkGaussianExponentialDiffeomorphicTransformPython.cpp.o CMakeFiles/ITKDisplacementFieldPython.dir/itkGaussianSmoothingOnUpdateDisplacementFieldTransformPython.cpp.o CMakeFiles/ITKDisplacementFieldPython.dir/itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransformPython.cpp.o CMakeFiles/ITKDisplacementFieldPython.dir/itkVelocityFieldTransformPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkBilateralImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBilateralImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkCannyEdgeDetectionImageFilterPython.cpp, ../../../lib/itkCannyEdgeDetectionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkBinaryMagnitudeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryMagnitudeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkClampImageFilterPython.cpp, ../../../lib/itkClampImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/c++ -DITKImageGradientPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageGradient/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageGradientPython.dir/itkVectorGradientMagnitudeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageGradient/itkVectorGradientMagnitudeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Linking CXX shared module ../../../lib/_ITKImageGradientPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageGradient && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageGradientPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageGradientPython.so CMakeFiles/ITKImageGradientPython.dir/ITKImageGradientPython.cpp.o CMakeFiles/ITKImageGradientPython.dir/itkDifferenceOfGaussiansGradientImageFilterPython.cpp.o CMakeFiles/ITKImageGradientPython.dir/itkGradientImageFilterPython.cpp.o CMakeFiles/ITKImageGradientPython.dir/itkGradientMagnitudeImageFilterPython.cpp.o CMakeFiles/ITKImageGradientPython.dir/itkGradientMagnitudeRecursiveGaussianImageFilterPython.cpp.o CMakeFiles/ITKImageGradientPython.dir/itkGradientRecursiveGaussianImageFilterPython.cpp.o CMakeFiles/ITKImageGradientPython.dir/itkVectorGradientMagnitudeImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageCompare/itkCheckerBoardImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCheckerBoardImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkSTAPLEImageFilterPython.cpp, ../../../lib/itkSTAPLEImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkCannyEdgeDetectionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCannyEdgeDetectionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkDerivativeImageFilterPython.cpp, ../../../lib/itkDerivativeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageCompare/itkSTAPLEImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSTAPLEImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkSimilarityIndexImageFilterPython.cpp, ../../../lib/itkSimilarityIndexImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkBoundedReciprocalImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBoundedReciprocalImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkComplexToImaginaryImageFilterPython.cpp, ../../../lib/itkComplexToImaginaryImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkDerivativeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDerivativeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkGradientVectorFlowImageFilterPython.cpp, ../../../lib/itkGradientVectorFlowImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkGradientVectorFlowImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGradientVectorFlowImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkHessian3DToVesselnessMeasureImageFilterPython.cpp, ../../../lib/itkHessian3DToVesselnessMeasureImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkBinaryThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkBinaryThresholdProjectionImageFilterPython.cpp, ../../../lib/itkBinaryThresholdProjectionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkHessian3DToVesselnessMeasureImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHessian3DToVesselnessMeasureImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkHessianToObjectnessMeasureImageFilterPython.cpp, ../../../lib/itkHessianToObjectnessMeasureImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkClampImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkClampImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkComplexToModulusImageFilterPython.cpp, ../../../lib/itkComplexToModulusImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkComplexToImaginaryImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkComplexToImaginaryImageFilter.i make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersSwig.dir/build.make Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersSwig.dir/depend make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKImageLabelPython make[2]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKImageGradientPython make[2]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKDisplacementFieldPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionPython.dir/build.make Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionPython.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageCompare/itkSimilarityIndexImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSimilarityIndexImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Classifiers/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKClassifiers /<>/BUILD/Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKClassifiersSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersSwig.dir/build.make Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkSquaredDifferenceImageFilterPython.cpp, ../../../lib/itkSquaredDifferenceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkComplexToPhaseImageFilterPython.cpp, ../../../lib/itkComplexToPhaseImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkConvolutionImageFilterBasePython.cpp, ../../../lib/itkConvolutionImageFilterBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkComplexToRealImageFilterPython.cpp, ../../../lib/itkComplexToRealImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ../../Typedefs/itkBayesianClassifierImageFilter.i, ../../Typedefs/itkBayesianClassifierInitializationImageFilter.i, ../../Typedefs/itkScalarImageKmeansImageFilter.i, ../../Typedefs/itkBayesianClassifierImageFilterSwigInterface.h, ../../Typedefs/itkBayesianClassifierInitializationImageFilterSwigInterface.h, ../../Typedefs/itkScalarImageKmeansImageFilterSwigInterface.h, ../../Typedefs/itkBayesianClassifierImageFilter.idx, ../../Typedefs/itkBayesianClassifierInitializationImageFilter.idx, ../../Typedefs/itkScalarImageKmeansImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKClassifiers && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKClassifiers.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKConnectedComponents.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKStatistics.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkBayesianClassifierImageFilter;itkBayesianClassifierInitializationImageFilter;itkScalarImageKmeansImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKClassifiersSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionSwig.dir/build.make Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Deconvolution/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKDeconvolution /<>/BUILD/Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeconvolutionSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionSwig.dir/build.make Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ../../Typedefs/itkIterativeDeconvolutionImageFilter.i, ../../Typedefs/itkInverseDeconvolutionImageFilter.i, ../../Typedefs/itkLandweberDeconvolutionImageFilter.i, ../../Typedefs/itkProjectedLandweberDeconvolutionImageFilter.i, ../../Typedefs/itkRichardsonLucyDeconvolutionImageFilter.i, ../../Typedefs/itkTikhonovDeconvolutionImageFilter.i, ../../Typedefs/itkWienerDeconvolutionImageFilter.i, ../../Typedefs/itkIterativeDeconvolutionImageFilterSwigInterface.h, ../../Typedefs/itkInverseDeconvolutionImageFilterSwigInterface.h, ../../Typedefs/itkLandweberDeconvolutionImageFilterSwigInterface.h, ../../Typedefs/itkProjectedLandweberDeconvolutionImageFilterSwigInterface.h, ../../Typedefs/itkRichardsonLucyDeconvolutionImageFilterSwigInterface.h, ../../Typedefs/itkTikhonovDeconvolutionImageFilterSwigInterface.h, ../../Typedefs/itkWienerDeconvolutionImageFilterSwigInterface.h, ../../Typedefs/itkIterativeDeconvolutionImageFilter.idx, ../../Typedefs/itkInverseDeconvolutionImageFilter.idx, ../../Typedefs/itkLandweberDeconvolutionImageFilter.idx, ../../Typedefs/itkProjectedLandweberDeconvolutionImageFilter.idx, ../../Typedefs/itkRichardsonLucyDeconvolutionImageFilter.idx, ../../Typedefs/itkTikhonovDeconvolutionImageFilter.idx, ../../Typedefs/itkWienerDeconvolutionImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKDeconvolution.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKConvolution.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageSources.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkIterativeDeconvolutionImageFilter;itkInverseDeconvolutionImageFilter;itkLandweberDeconvolutionImageFilter;itkProjectedLandweberDeconvolutionImageFilter;itkRichardsonLucyDeconvolutionImageFilter;itkTikhonovDeconvolutionImageFilter;itkWienerDeconvolutionImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKDeconvolutionSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/build.make Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkBlockMatchingImageFilterPython.cpp, ../../../lib/itkBlockMatchingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkBlockMatchingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBlockMatchingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkCenteredTransformInitializerPython.cpp, ../../../lib/itkCenteredTransformInitializerPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkBinaryThresholdProjectionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryThresholdProjectionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkHuangThresholdCalculatorPython.cpp, ../../../lib/itkHuangThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConvolution/itkConvolutionImageFilterBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkConvolutionImageFilterBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkConvolutionImageFilterPython.cpp, ../../../lib/itkConvolutionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkHuangThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHuangThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkHuangThresholdImageFilterPython.cpp, ../../../lib/itkHuangThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkCenteredTransformInitializerPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCenteredTransformInitializer.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkCenteredVersorTransformInitializerPython.cpp, ../../../lib/itkCenteredVersorTransformInitializerPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkHessianToObjectnessMeasureImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHessianToObjectnessMeasureImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkHoughTransform2DCirclesImageFilterPython.cpp, ../../../lib/itkHoughTransform2DCirclesImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkCenteredVersorTransformInitializerPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCenteredVersorTransformInitializer.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkImageRegistrationMethodPython.cpp, ../../../lib/itkImageRegistrationMethodPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConvolution/itkConvolutionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkConvolutionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkFFTConvolutionImageFilterPython.cpp, ../../../lib/itkFFTConvolutionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkHuangThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHuangThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkIntermodesThresholdCalculatorPython.cpp, ../../../lib/itkIntermodesThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkIntermodesThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIntermodesThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkIntermodesThresholdImageFilterPython.cpp, ../../../lib/itkIntermodesThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkImageRegistrationMethodPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageRegistrationMethod.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkImageToImageMetricPython.cpp, ../../../lib/itkImageToImageMetricPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkHoughTransform2DCirclesImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHoughTransform2DCirclesImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkHoughTransform2DLinesImageFilterPython.cpp, ../../../lib/itkHoughTransform2DLinesImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConvolution/itkFFTConvolutionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFFTConvolutionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkFFTNormalizedCorrelationImageFilterPython.cpp, ../../../lib/itkFFTNormalizedCorrelationImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkImageToImageMetricPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageToImageMetric.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkLandmarkBasedTransformInitializerPython.cpp, ../../../lib/itkLandmarkBasedTransformInitializerPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkComplexToModulusImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkComplexToModulusImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkConstrainedValueAdditionImageFilterPython.cpp, ../../../lib/itkConstrainedValueAdditionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkLandmarkBasedTransformInitializerPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLandmarkBasedTransformInitializer.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMattesMutualInformationImageToImageMetricPython.cpp, ../../../lib/itkMattesMutualInformationImageToImageMetricPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkIntermodesThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIntermodesThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkIsoDataThresholdCalculatorPython.cpp, ../../../lib/itkIsoDataThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkComplexToRealImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkComplexToRealImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkConstrainedValueDifferenceImageFilterPython.cpp, ../../../lib/itkConstrainedValueDifferenceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkComplexToPhaseImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkComplexToPhaseImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkCosImageFilterPython.cpp, ../../../lib/itkCosImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkIsoDataThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIsoDataThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkIsoDataThresholdImageFilterPython.cpp, ../../../lib/itkIsoDataThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkHoughTransform2DLinesImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHoughTransform2DLinesImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkLaplacianImageFilterPython.cpp, ../../../lib/itkLaplacianImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConvolution/itkFFTNormalizedCorrelationImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFFTNormalizedCorrelationImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMaskedFFTNormalizedCorrelationImageFilterPython.cpp, ../../../lib/itkMaskedFFTNormalizedCorrelationImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkMattesMutualInformationImageToImageMetricPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMattesMutualInformationImageToImageMetric.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMeanReciprocalSquareDifferenceImageToImageMetricPython.cpp, ../../../lib/itkMeanReciprocalSquareDifferenceImageToImageMetricPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageCompare/itkSquaredDifferenceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSquaredDifferenceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ITKImageComparePython.cpp, ../../../lib/ITKImageComparePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageCompare/ITKImageComparePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageCompare.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageCompare/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageCompare /<>/BUILD/Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageComparePython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageComparePython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageComparePython.dir/build.make Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageComparePython.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageComparePython.dir/ITKImageComparePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/c++ -DITKImageComparePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageCompare/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageComparePython.dir/ITKImageComparePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageCompare/ITKImageComparePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageComparePython.dir/itkAbsoluteValueDifferenceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkLaplacianImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLaplacianImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkLaplacianRecursiveGaussianImageFilterPython.cpp, ../../../lib/itkLaplacianRecursiveGaussianImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/c++ -DITKImageComparePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageCompare/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageComparePython.dir/itkAbsoluteValueDifferenceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageCompare/itkAbsoluteValueDifferenceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageComparePython.dir/itkCheckerBoardImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkMeanReciprocalSquareDifferenceImageToImageMetricPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMeanReciprocalSquareDifferenceImageToImageMetric.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMeanSquaresImageToImageMetricPython.cpp, ../../../lib/itkMeanSquaresImageToImageMetricPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkIsoDataThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIsoDataThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkKappaSigmaThresholdImageFilterPython.cpp, ../../../lib/itkKappaSigmaThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConvolution/itkMaskedFFTNormalizedCorrelationImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMaskedFFTNormalizedCorrelationImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ITKConvolutionPython.cpp, ../../../lib/ITKConvolutionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConvolution/ITKConvolutionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKConvolution.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Convolution/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKConvolution /<>/BUILD/Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKConvolutionPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionPython.dir/build.make Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionPython.dir/ITKConvolutionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/c++ -DITKConvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Convolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConvolutionPython.dir/ITKConvolutionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConvolution/ITKConvolutionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionPython.dir/itkConvolutionImageFilterBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/c++ -DITKConvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Convolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConvolutionPython.dir/itkConvolutionImageFilterBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConvolution/itkConvolutionImageFilterBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionPython.dir/itkConvolutionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkLaplacianRecursiveGaussianImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLaplacianRecursiveGaussianImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkLaplacianSharpeningImageFilterPython.cpp, ../../../lib/itkLaplacianSharpeningImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkMeanSquaresImageToImageMetricPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMeanSquaresImageToImageMetric.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMultiResolutionImageRegistrationMethodPython.cpp, ../../../lib/itkMultiResolutionImageRegistrationMethodPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkKappaSigmaThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkKappaSigmaThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkKittlerIllingworthThresholdCalculatorPython.cpp, ../../../lib/itkKittlerIllingworthThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/c++ -DITKImageComparePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageCompare/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageComparePython.dir/itkCheckerBoardImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageCompare/itkCheckerBoardImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageComparePython.dir/itkSTAPLEImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkKittlerIllingworthThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkKittlerIllingworthThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkKittlerIllingworthThresholdImageFilterPython.cpp, ../../../lib/itkKittlerIllingworthThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/c++ -DITKImageComparePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageCompare/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageComparePython.dir/itkSTAPLEImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageCompare/itkSTAPLEImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageComparePython.dir/itkSimilarityIndexImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/c++ -DITKConvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Convolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConvolutionPython.dir/itkConvolutionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConvolution/itkConvolutionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionPython.dir/itkFFTConvolutionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkLaplacianSharpeningImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLaplacianSharpeningImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMaskFeaturePointSelectionFilterPython.cpp, ../../../lib/itkMaskFeaturePointSelectionFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/c++ -DITKImageComparePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageCompare/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageComparePython.dir/itkSimilarityIndexImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageCompare/itkSimilarityIndexImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageCompare/CMakeFiles/ITKImageComparePython.dir/itkSquaredDifferenceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkMaskFeaturePointSelectionFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMaskFeaturePointSelectionFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkSimpleContourExtractorImageFilterPython.cpp, ../../../lib/itkSimpleContourExtractorImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/c++ -DITKImageComparePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageCompare/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageComparePython.dir/itkSquaredDifferenceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageCompare/itkSquaredDifferenceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Linking CXX shared module ../../../lib/_ITKImageComparePython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageCompare && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageComparePython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageComparePython.so CMakeFiles/ITKImageComparePython.dir/ITKImageComparePython.cpp.o CMakeFiles/ITKImageComparePython.dir/itkAbsoluteValueDifferenceImageFilterPython.cpp.o CMakeFiles/ITKImageComparePython.dir/itkCheckerBoardImageFilterPython.cpp.o CMakeFiles/ITKImageComparePython.dir/itkSTAPLEImageFilterPython.cpp.o CMakeFiles/ITKImageComparePython.dir/itkSimilarityIndexImageFilterPython.cpp.o CMakeFiles/ITKImageComparePython.dir/itkSquaredDifferenceImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKImageComparePython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationSwig.dir/build.make Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/PDEDeformable/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPDEDeformableRegistrationSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationSwig.dir/build.make Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ../../Typedefs/itkDemonsRegistrationFilter.i, ../../Typedefs/itkLevelSetMotionRegistrationFilter.i, ../../Typedefs/itkPDEDeformableRegistrationFilter.i, ../../Typedefs/itkSymmetricForcesDemonsRegistrationFilter.i, ../../Typedefs/itkDemonsRegistrationFilterSwigInterface.h, ../../Typedefs/itkLevelSetMotionRegistrationFilterSwigInterface.h, ../../Typedefs/itkPDEDeformableRegistrationFilterSwigInterface.h, ../../Typedefs/itkSymmetricForcesDemonsRegistrationFilterSwigInterface.h, ../../Typedefs/itkDemonsRegistrationFilter.idx, ../../Typedefs/itkLevelSetMotionRegistrationFilter.idx, ../../Typedefs/itkPDEDeformableRegistrationFilter.idx, ../../Typedefs/itkSymmetricForcesDemonsRegistrationFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKPDEDeformableRegistration.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKFiniteDifference.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKRegistrationCommon.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkDemonsRegistrationFilter;itkLevelSetMotionRegistrationFilter;itkPDEDeformableRegistrationFilter;itkSymmetricForcesDemonsRegistrationFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKPDEDeformableRegistrationSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBasePython.dir/build.make Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBasePython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkTransformFileReaderPython.cpp, ../../../lib/itkTransformFileReaderPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkKittlerIllingworthThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkKittlerIllingworthThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkLiThresholdCalculatorPython.cpp, ../../../lib/itkLiThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkMultiResolutionImageRegistrationMethodPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMultiResolutionImageRegistrationMethod.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMultiResolutionPyramidImageFilterPython.cpp, ../../../lib/itkMultiResolutionPyramidImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/c++ -DITKConvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Convolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConvolutionPython.dir/itkFFTConvolutionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConvolution/itkFFTConvolutionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionPython.dir/itkFFTNormalizedCorrelationImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkLiThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLiThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkLiThresholdImageFilterPython.cpp, ../../../lib/itkLiThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOTransformBase/itkTransformFileReaderPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTransformFileReader.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkTransformFileWriterPython.cpp, ../../../lib/itkTransformFileWriterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkSimpleContourExtractorImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSimpleContourExtractorImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkSobelEdgeDetectionImageFilterPython.cpp, ../../../lib/itkSobelEdgeDetectionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOTransformBase/itkTransformFileWriterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTransformFileWriter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkTransformIOBaseTemplatePython.cpp, ../../../lib/itkTransformIOBaseTemplatePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkConstrainedValueAdditionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkConstrainedValueAdditionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkDivideImageFilterPython.cpp, ../../../lib/itkDivideImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkCosImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCosImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkEdgePotentialImageFilterPython.cpp, ../../../lib/itkEdgePotentialImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOTransformBase/itkTransformIOBaseTemplatePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTransformIOBaseTemplate.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ITKIOTransformBasePython.cpp, ../../../lib/ITKIOTransformBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKIOTransformBase/ITKIOTransformBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKIOTransformBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/IO/TransformBase/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKIOTransformBase /<>/BUILD/Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBasePython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKIOTransformBasePython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBasePython.dir/build.make Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBasePython.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBasePython.dir/ITKIOTransformBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTransformBase && /usr/bin/c++ -DITKIOTransformBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/TransformBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOTransformBasePython.dir/ITKIOTransformBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOTransformBase/ITKIOTransformBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBasePython.dir/itkTransformFileReaderPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTransformBase && /usr/bin/c++ -DITKIOTransformBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/TransformBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOTransformBasePython.dir/itkTransformFileReaderPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOTransformBase/itkTransformFileReaderPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBasePython.dir/itkTransformFileWriterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkConstrainedValueDifferenceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkConstrainedValueDifferenceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkExpImageFilterPython.cpp, ../../../lib/itkExpImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTransformBase && /usr/bin/c++ -DITKIOTransformBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/TransformBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOTransformBasePython.dir/itkTransformFileWriterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOTransformBase/itkTransformFileWriterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKIOTransformBase/CMakeFiles/ITKIOTransformBasePython.dir/itkTransformIOBaseTemplatePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTransformBase && /usr/bin/c++ -DITKIOTransformBasePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/IO/TransformBase/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKIOTransformBasePython.dir/itkTransformIOBaseTemplatePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKIOTransformBase/itkTransformIOBaseTemplatePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Linking CXX shared module ../../../lib/_ITKIOTransformBasePython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKIOTransformBase && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKIOTransformBasePython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKIOTransformBasePython.so CMakeFiles/ITKIOTransformBasePython.dir/ITKIOTransformBasePython.cpp.o CMakeFiles/ITKIOTransformBasePython.dir/itkTransformFileReaderPython.cpp.o CMakeFiles/ITKIOTransformBasePython.dir/itkTransformFileWriterPython.cpp.o CMakeFiles/ITKIOTransformBasePython.dir/itkTransformIOBaseTemplatePython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKIOTransformBasePython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingPython.dir/build.make Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkVotingBinaryImageFilterPython.cpp, ../../../lib/itkVotingBinaryImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkMultiResolutionPyramidImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMultiResolutionPyramidImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMutualInformationImageToImageMetricPython.cpp, ../../../lib/itkMutualInformationImageToImageMetricPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkSobelEdgeDetectionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSobelEdgeDetectionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkUnsharpMaskImageFilterPython.cpp, ../../../lib/itkUnsharpMaskImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkLiThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLiThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMaximumEntropyThresholdCalculatorPython.cpp, ../../../lib/itkMaximumEntropyThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkMaximumEntropyThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMaximumEntropyThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMaximumEntropyThresholdImageFilterPython.cpp, ../../../lib/itkMaximumEntropyThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelVoting/itkVotingBinaryImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVotingBinaryImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkBinaryMedianImageFilterPython.cpp, ../../../lib/itkBinaryMedianImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkMutualInformationImageToImageMetricPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMutualInformationImageToImageMetric.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkNormalizedCorrelationImageToImageMetricPython.cpp, ../../../lib/itkNormalizedCorrelationImageToImageMetricPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/c++ -DITKConvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Convolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConvolutionPython.dir/itkFFTNormalizedCorrelationImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConvolution/itkFFTNormalizedCorrelationImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKConvolution/CMakeFiles/ITKConvolutionPython.dir/itkMaskedFFTNormalizedCorrelationImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkUnsharpMaskImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkUnsharpMaskImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkZeroCrossingBasedEdgeDetectionImageFilterPython.cpp, ../../../lib/itkZeroCrossingBasedEdgeDetectionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkNormalizedCorrelationImageToImageMetricPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNormalizedCorrelationImageToImageMetric.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkPDEDeformableRegistrationFunctionPython.cpp, ../../../lib/itkPDEDeformableRegistrationFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelVoting/itkBinaryMedianImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryMedianImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkLabelVotingImageFilterPython.cpp, ../../../lib/itkLabelVotingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkMaximumEntropyThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMaximumEntropyThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMomentsThresholdCalculatorPython.cpp, ../../../lib/itkMomentsThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkPDEDeformableRegistrationFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPDEDeformableRegistrationFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkRecursiveMultiResolutionPyramidImageFilterPython.cpp, ../../../lib/itkRecursiveMultiResolutionPyramidImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkMomentsThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMomentsThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMomentsThresholdImageFilterPython.cpp, ../../../lib/itkMomentsThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkZeroCrossingBasedEdgeDetectionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkZeroCrossingBasedEdgeDetectionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkZeroCrossingImageFilterPython.cpp, ../../../lib/itkZeroCrossingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/c++ -DITKConvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Convolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConvolutionPython.dir/itkMaskedFFTNormalizedCorrelationImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConvolution/itkMaskedFFTNormalizedCorrelationImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Linking CXX shared module ../../../lib/_ITKConvolutionPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelVoting/itkLabelVotingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelVotingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkVotingBinaryHoleFillingImageFilterPython.cpp, ../../../lib/itkVotingBinaryHoleFillingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConvolution && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKConvolutionPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKConvolutionPython.so CMakeFiles/ITKConvolutionPython.dir/ITKConvolutionPython.cpp.o CMakeFiles/ITKConvolutionPython.dir/itkConvolutionImageFilterBasePython.cpp.o CMakeFiles/ITKConvolutionPython.dir/itkConvolutionImageFilterPython.cpp.o CMakeFiles/ITKConvolutionPython.dir/itkFFTConvolutionImageFilterPython.cpp.o CMakeFiles/ITKConvolutionPython.dir/itkFFTNormalizedCorrelationImageFilterPython.cpp.o CMakeFiles/ITKConvolutionPython.dir/itkMaskedFFTNormalizedCorrelationImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKConvolutionPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingPython.dir/build.make Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkConfidenceConnectedImageFilterPython.cpp, ../../../lib/itkConfidenceConnectedImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkRecursiveMultiResolutionPyramidImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRecursiveMultiResolutionPyramidImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkTransformParametersAdaptorBasePython.cpp, ../../../lib/itkTransformParametersAdaptorBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkZeroCrossingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkZeroCrossingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ITKImageFeaturePython.cpp, ../../../lib/ITKImageFeaturePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFeature/ITKImageFeaturePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageFeature.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFeature/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageFeature /<>/BUILD/Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFeaturePython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/build.make Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/ITKImageFeaturePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkTransformParametersAdaptorBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTransformParametersAdaptorBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ITKRegistrationCommonPython.cpp, ../../../lib/ITKRegistrationCommonPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/ITKRegistrationCommonPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKRegistrationCommon.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/ITKImageFeaturePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/ITKImageFeaturePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkHessianRecursiveGaussianImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Common/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationCommonPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/build.make Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/ITKRegistrationCommonPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/ITKRegistrationCommonPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/ITKRegistrationCommonPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkBlockMatchingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkMomentsThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMomentsThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkOtsuMultipleThresholdsImageFilterPython.cpp, ../../../lib/itkOtsuMultipleThresholdsImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkBlockMatchingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkBlockMatchingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkCenteredTransformInitializerPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkCenteredTransformInitializerPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkCenteredTransformInitializerPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkCenteredVersorTransformInitializerPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelVoting/itkVotingBinaryHoleFillingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVotingBinaryHoleFillingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkVotingBinaryIterativeHoleFillingImageFilterPython.cpp, ../../../lib/itkVotingBinaryIterativeHoleFillingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkCenteredVersorTransformInitializerPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkCenteredVersorTransformInitializerPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkImageRegistrationMethodPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkHessianRecursiveGaussianImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkHessianRecursiveGaussianImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkBilateralImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkEdgePotentialImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkEdgePotentialImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkExpNegativeImageFilterPython.cpp, ../../../lib/itkExpNegativeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/itkConfidenceConnectedImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkConfidenceConnectedImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkConnectedThresholdImageFilterPython.cpp, ../../../lib/itkConnectedThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkImageRegistrationMethodPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkImageRegistrationMethodPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkImageToImageMetricPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkExpImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkExpImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkHistogramMatchingImageFilterPython.cpp, ../../../lib/itkHistogramMatchingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkOtsuMultipleThresholdsImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkOtsuMultipleThresholdsImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkOtsuThresholdCalculatorPython.cpp, ../../../lib/itkOtsuThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkImageToImageMetricPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkImageToImageMetricPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkLandmarkBasedTransformInitializerPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkOtsuThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkOtsuThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkOtsuThresholdImageFilterPython.cpp, ../../../lib/itkOtsuThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkBilateralImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkBilateralImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkCannyEdgeDetectionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelVoting/itkVotingBinaryIterativeHoleFillingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVotingBinaryIterativeHoleFillingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ITKLabelVotingPython.cpp, ../../../lib/ITKLabelVotingPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLabelVoting/ITKLabelVotingPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKLabelVoting.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LabelVoting/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKLabelVoting /<>/BUILD/Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLabelVotingPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingPython.dir/build.make Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingPython.dir/ITKLabelVotingPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/c++ -DITKLabelVotingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LabelVoting/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelVotingPython.dir/ITKLabelVotingPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelVoting/ITKLabelVotingPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingPython.dir/itkVotingBinaryImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/itkConnectedThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkConnectedThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkIsolatedConnectedImageFilterPython.cpp, ../../../lib/itkIsolatedConnectedImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkLandmarkBasedTransformInitializerPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkLandmarkBasedTransformInitializerPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkMattesMutualInformationImageToImageMetricPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkCannyEdgeDetectionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkCannyEdgeDetectionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkDerivativeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkHistogramMatchingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHistogramMatchingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkIntensityWindowingImageFilterPython.cpp, ../../../lib/itkIntensityWindowingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/c++ -DITKLabelVotingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LabelVoting/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelVotingPython.dir/itkVotingBinaryImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelVoting/itkVotingBinaryImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingPython.dir/itkBinaryMedianImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkDerivativeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkDerivativeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkGradientVectorFlowImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkOtsuThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkOtsuThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkRenyiEntropyThresholdCalculatorPython.cpp, ../../../lib/itkRenyiEntropyThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/c++ -DITKLabelVotingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LabelVoting/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelVotingPython.dir/itkBinaryMedianImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelVoting/itkBinaryMedianImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingPython.dir/itkLabelVotingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkRenyiEntropyThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRenyiEntropyThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkRenyiEntropyThresholdImageFilterPython.cpp, ../../../lib/itkRenyiEntropyThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/itkIsolatedConnectedImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIsolatedConnectedImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkNeighborhoodConnectedImageFilterPython.cpp, ../../../lib/itkNeighborhoodConnectedImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/c++ -DITKLabelVotingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LabelVoting/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelVotingPython.dir/itkLabelVotingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelVoting/itkLabelVotingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingPython.dir/itkVotingBinaryHoleFillingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkGradientVectorFlowImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkGradientVectorFlowImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkHessian3DToVesselnessMeasureImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkMattesMutualInformationImageToImageMetricPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkMattesMutualInformationImageToImageMetricPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkMeanReciprocalSquareDifferenceImageToImageMetricPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkHessian3DToVesselnessMeasureImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkHessian3DToVesselnessMeasureImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkHessianToObjectnessMeasureImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/c++ -DITKLabelVotingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LabelVoting/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelVotingPython.dir/itkVotingBinaryHoleFillingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelVoting/itkVotingBinaryHoleFillingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKLabelVoting/CMakeFiles/ITKLabelVotingPython.dir/itkVotingBinaryIterativeHoleFillingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkDivideImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDivideImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkInvertIntensityImageFilterPython.cpp, ../../../lib/itkInvertIntensityImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkHessianToObjectnessMeasureImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkHessianToObjectnessMeasureImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkHoughTransform2DCirclesImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/c++ -DITKLabelVotingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LabelVoting/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLabelVotingPython.dir/itkVotingBinaryIterativeHoleFillingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLabelVoting/itkVotingBinaryIterativeHoleFillingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Linking CXX shared module ../../../lib/_ITKLabelVotingPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLabelVoting && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLabelVotingPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKLabelVotingPython.so CMakeFiles/ITKLabelVotingPython.dir/ITKLabelVotingPython.cpp.o CMakeFiles/ITKLabelVotingPython.dir/itkVotingBinaryImageFilterPython.cpp.o CMakeFiles/ITKLabelVotingPython.dir/itkBinaryMedianImageFilterPython.cpp.o CMakeFiles/ITKLabelVotingPython.dir/itkLabelVotingImageFilterPython.cpp.o CMakeFiles/ITKLabelVotingPython.dir/itkVotingBinaryHoleFillingImageFilterPython.cpp.o CMakeFiles/ITKLabelVotingPython.dir/itkVotingBinaryIterativeHoleFillingImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKLabelVotingPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/build.make Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/depend make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkGradientDescentOptimizerBasev4Python.cpp, ../../../lib/itkGradientDescentOptimizerBasev4Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/itkNeighborhoodConnectedImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNeighborhoodConnectedImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkVectorConfidenceConnectedImageFilterPython.cpp, ../../../lib/itkVectorConfidenceConnectedImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkGradientDescentOptimizerBasev4Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGradientDescentOptimizerBasev4.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkGradientDescentOptimizerv4Python.cpp, ../../../lib/itkGradientDescentOptimizerv4Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkGradientDescentOptimizerv4Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGradientDescentOptimizerv4.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkObjectToObjectMetricPython.cpp, ../../../lib/itkObjectToObjectMetricPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkHoughTransform2DCirclesImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkHoughTransform2DCirclesImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkHoughTransform2DLinesImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkRenyiEntropyThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRenyiEntropyThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkShanbhagThresholdCalculatorPython.cpp, ../../../lib/itkShanbhagThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkMeanReciprocalSquareDifferenceImageToImageMetricPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkMeanReciprocalSquareDifferenceImageToImageMetricPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkMeanSquaresImageToImageMetricPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkShanbhagThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShanbhagThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkShanbhagThresholdImageFilterPython.cpp, ../../../lib/itkShanbhagThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkObjectToObjectMetricPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkObjectToObjectMetric.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkObjectToObjectMetricBasePython.cpp, ../../../lib/itkObjectToObjectMetricBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkHoughTransform2DLinesImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkHoughTransform2DLinesImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkLaplacianImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkObjectToObjectMetricBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkObjectToObjectMetricBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkObjectToObjectOptimizerBasePython.cpp, ../../../lib/itkObjectToObjectOptimizerBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkObjectToObjectOptimizerBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkObjectToObjectOptimizerBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkOptimizerParameterScalesEstimatorPython.cpp, ../../../lib/itkOptimizerParameterScalesEstimatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkOptimizerParameterScalesEstimatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkOptimizerParameterScalesEstimator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkQuasiNewtonOptimizerv4Python.cpp, ../../../lib/itkQuasiNewtonOptimizerv4Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkQuasiNewtonOptimizerv4Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkQuasiNewtonOptimizerv4.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkRegularStepGradientDescentOptimizerv4Python.cpp, ../../../lib/itkRegularStepGradientDescentOptimizerv4Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkLaplacianImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkLaplacianImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkLaplacianRecursiveGaussianImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkRegularStepGradientDescentOptimizerv4Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRegularStepGradientDescentOptimizerv4.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkSingleValuedCostFunctionv4Python.cpp, ../../../lib/itkSingleValuedCostFunctionv4Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkSingleValuedCostFunctionv4Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSingleValuedCostFunctionv4.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ITKOptimizersv4Python.cpp, ../../../lib/ITKOptimizersv4Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/ITKOptimizersv4Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKOptimizersv4.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Numerics/Optimizersv4/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/DependInfo.cmake --color= Scanning dependencies of target ITKOptimizersv4Python make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/build.make Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/ITKOptimizersv4Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/c++ -DITKOptimizersv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizersv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersv4Python.dir/ITKOptimizersv4Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/ITKOptimizersv4Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/itkGradientDescentOptimizerBasev4Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/c++ -DITKOptimizersv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizersv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersv4Python.dir/itkGradientDescentOptimizerBasev4Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkGradientDescentOptimizerBasev4Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/itkGradientDescentOptimizerv4Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/c++ -DITKOptimizersv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizersv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersv4Python.dir/itkGradientDescentOptimizerv4Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkGradientDescentOptimizerv4Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/itkObjectToObjectMetricPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/c++ -DITKOptimizersv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizersv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersv4Python.dir/itkObjectToObjectMetricPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkObjectToObjectMetricPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/itkObjectToObjectMetricBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkMeanSquaresImageToImageMetricPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkMeanSquaresImageToImageMetricPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkMultiResolutionImageRegistrationMethodPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/c++ -DITKOptimizersv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizersv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersv4Python.dir/itkObjectToObjectMetricBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkObjectToObjectMetricBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/itkObjectToObjectOptimizerBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/c++ -DITKOptimizersv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizersv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersv4Python.dir/itkObjectToObjectOptimizerBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkObjectToObjectOptimizerBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/itkOptimizerParameterScalesEstimatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/c++ -DITKOptimizersv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizersv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersv4Python.dir/itkOptimizerParameterScalesEstimatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkOptimizerParameterScalesEstimatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/itkQuasiNewtonOptimizerv4Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkExpNegativeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkExpNegativeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkLog10ImageFilterPython.cpp, ../../../lib/itkLog10ImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkLaplacianRecursiveGaussianImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkLaplacianRecursiveGaussianImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkLaplacianSharpeningImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkShanbhagThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShanbhagThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkThresholdImageFilterPython.cpp, ../../../lib/itkThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/c++ -DITKOptimizersv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizersv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersv4Python.dir/itkQuasiNewtonOptimizerv4Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkQuasiNewtonOptimizerv4Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/itkRegularStepGradientDescentOptimizerv4Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/c++ -DITKOptimizersv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizersv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersv4Python.dir/itkRegularStepGradientDescentOptimizerv4Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkRegularStepGradientDescentOptimizerv4Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKOptimizersv4/CMakeFiles/ITKOptimizersv4Python.dir/itkSingleValuedCostFunctionv4Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/c++ -DITKOptimizersv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Numerics/Optimizersv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKOptimizersv4Python.dir/itkSingleValuedCostFunctionv4Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKOptimizersv4/itkSingleValuedCostFunctionv4Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Linking CXX shared module ../../../lib/_ITKOptimizersv4Python.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKOptimizersv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKOptimizersv4Python.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKOptimizersv4Python.so CMakeFiles/ITKOptimizersv4Python.dir/ITKOptimizersv4Python.cpp.o CMakeFiles/ITKOptimizersv4Python.dir/itkGradientDescentOptimizerBasev4Python.cpp.o CMakeFiles/ITKOptimizersv4Python.dir/itkGradientDescentOptimizerv4Python.cpp.o CMakeFiles/ITKOptimizersv4Python.dir/itkObjectToObjectMetricPython.cpp.o CMakeFiles/ITKOptimizersv4Python.dir/itkObjectToObjectMetricBasePython.cpp.o CMakeFiles/ITKOptimizersv4Python.dir/itkObjectToObjectOptimizerBasePython.cpp.o CMakeFiles/ITKOptimizersv4Python.dir/itkOptimizerParameterScalesEstimatorPython.cpp.o CMakeFiles/ITKOptimizersv4Python.dir/itkQuasiNewtonOptimizerv4Python.cpp.o CMakeFiles/ITKOptimizersv4Python.dir/itkRegularStepGradientDescentOptimizerv4Python.cpp.o CMakeFiles/ITKOptimizersv4Python.dir/itkSingleValuedCostFunctionv4Python.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKOptimizersv4Python make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Swig.dir/build.make Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Swig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Metricsv4/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKMetricsv4 /<>/BUILD/Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Swig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMetricsv4Swig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Swig.dir/build.make Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Swig.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ../../Typedefs/itkImageToImageMetricv4.i, ../../Typedefs/itkMattesMutualInformationImageToImageMetricv4.i, ../../Typedefs/itkMeanSquaresImageToImageMetricv4.i, ../../Typedefs/itkImageToImageMetricv4SwigInterface.h, ../../Typedefs/itkMattesMutualInformationImageToImageMetricv4SwigInterface.h, ../../Typedefs/itkMeanSquaresImageToImageMetricv4SwigInterface.h, ../../Typedefs/itkImageToImageMetricv4.idx, ../../Typedefs/itkMattesMutualInformationImageToImageMetricv4.idx, ../../Typedefs/itkMeanSquaresImageToImageMetricv4.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMetricsv4 && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKMetricsv4.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKOptimizersv4.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKRegistrationCommon.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkImageToImageMetricv4;itkMattesMutualInformationImageToImageMetricv4;itkMeanSquaresImageToImageMetricv4" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKMetricsv4Swig make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkThresholdLabelerImageFilterPython.cpp, ../../../lib/itkThresholdLabelerImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkLaplacianSharpeningImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkLaplacianSharpeningImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkMaskFeaturePointSelectionFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkMaskFeaturePointSelectionFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkMaskFeaturePointSelectionFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkSimpleContourExtractorImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkSimpleContourExtractorImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkSimpleContourExtractorImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkSobelEdgeDetectionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkMultiResolutionImageRegistrationMethodPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkMultiResolutionImageRegistrationMethodPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkMultiResolutionPyramidImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/itkVectorConfidenceConnectedImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorConfidenceConnectedImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ITKRegionGrowingPython.cpp, ../../../lib/ITKRegionGrowingPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/ITKRegionGrowingPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKRegionGrowing.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/RegionGrowing/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKRegionGrowing /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegionGrowingPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingPython.dir/build.make Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingPython.dir/ITKRegionGrowingPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/c++ -DITKRegionGrowingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/RegionGrowing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegionGrowingPython.dir/ITKRegionGrowingPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/ITKRegionGrowingPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingPython.dir/itkConfidenceConnectedImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkSobelEdgeDetectionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkSobelEdgeDetectionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkUnsharpMaskImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkIntensityWindowingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIntensityWindowingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkLogImageFilterPython.cpp, ../../../lib/itkLogImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkUnsharpMaskImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkUnsharpMaskImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkZeroCrossingBasedEdgeDetectionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkMultiResolutionPyramidImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkMultiResolutionPyramidImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkMutualInformationImageToImageMetricPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkInvertIntensityImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkInvertIntensityImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMagnitudeAndPhaseToComplexImageFilterPython.cpp, ../../../lib/itkMagnitudeAndPhaseToComplexImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkZeroCrossingBasedEdgeDetectionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkZeroCrossingBasedEdgeDetectionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKImageFeature/CMakeFiles/ITKImageFeaturePython.dir/itkZeroCrossingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/c++ -DITKRegionGrowingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/RegionGrowing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegionGrowingPython.dir/itkConfidenceConnectedImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/itkConfidenceConnectedImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingPython.dir/itkConnectedThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/c++ -DITKImageFeaturePython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFeature/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFeaturePython.dir/itkZeroCrossingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFeature/itkZeroCrossingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Linking CXX shared module ../../../lib/_ITKImageFeaturePython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFeature && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageFeaturePython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageFeaturePython.so CMakeFiles/ITKImageFeaturePython.dir/ITKImageFeaturePython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkHessianRecursiveGaussianImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkBilateralImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkCannyEdgeDetectionImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkDerivativeImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkGradientVectorFlowImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkHessian3DToVesselnessMeasureImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkHessianToObjectnessMeasureImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkHoughTransform2DCirclesImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkHoughTransform2DLinesImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkLaplacianImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkLaplacianRecursiveGaussianImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkLaplacianSharpeningImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkMaskFeaturePointSelectionFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkSimpleContourExtractorImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkSobelEdgeDetectionImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkUnsharpMaskImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkZeroCrossingBasedEdgeDetectionImageFilterPython.cpp.o CMakeFiles/ITKImageFeaturePython.dir/itkZeroCrossingImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 91%] Built target ITKImageFeaturePython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsPython.dir/build.make Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkConnectedComponentImageFilterPython.cpp, ../../../lib/itkConnectedComponentImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/c++ -DITKRegionGrowingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/RegionGrowing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegionGrowingPython.dir/itkConnectedThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/itkConnectedThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingPython.dir/itkIsolatedConnectedImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkMutualInformationImageToImageMetricPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkMutualInformationImageToImageMetricPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkNormalizedCorrelationImageToImageMetricPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/c++ -DITKRegionGrowingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/RegionGrowing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegionGrowingPython.dir/itkIsolatedConnectedImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/itkIsolatedConnectedImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingPython.dir/itkNeighborhoodConnectedImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkLog10ImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLog10ImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMaskImageFilterPython.cpp, ../../../lib/itkMaskImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkTriangleThresholdCalculatorPython.cpp, ../../../lib/itkTriangleThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkTriangleThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTriangleThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkTriangleThresholdImageFilterPython.cpp, ../../../lib/itkTriangleThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkNormalizedCorrelationImageToImageMetricPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkNormalizedCorrelationImageToImageMetricPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkPDEDeformableRegistrationFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/c++ -DITKRegionGrowingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/RegionGrowing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegionGrowingPython.dir/itkNeighborhoodConnectedImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/itkNeighborhoodConnectedImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegionGrowing/CMakeFiles/ITKRegionGrowingPython.dir/itkVectorConfidenceConnectedImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkThresholdLabelerImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkThresholdLabelerImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkYenThresholdCalculatorPython.cpp, ../../../lib/itkYenThresholdCalculatorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkYenThresholdCalculatorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkYenThresholdCalculator.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkYenThresholdImageFilterPython.cpp, ../../../lib/itkYenThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkPDEDeformableRegistrationFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkPDEDeformableRegistrationFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkRecursiveMultiResolutionPyramidImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkTriangleThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTriangleThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKRegistrationCommon/CMakeFiles/ITKRegistrationCommonPython.dir/itkTransformParametersAdaptorBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkTransformParametersAdaptorBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkTransformParametersAdaptorBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating itkMaskNegatedImageFilterPython.cpp, ../../../lib/itkMaskNegatedImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/itkYenThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkYenThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Generating ITKThresholdingPython.cpp, ../../../lib/ITKThresholdingPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKThresholding/ITKThresholdingPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKThresholding.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Thresholding/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKThresholding /<>/BUILD/Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKThresholdingPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/build.make Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/ITKThresholdingPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/ITKThresholdingPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/ITKThresholdingPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkHistogramThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/c++ -DITKRegistrationCommonPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Common/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationCommonPython.dir/itkRecursiveMultiResolutionPyramidImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon/itkRecursiveMultiResolutionPyramidImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 91%] Linking CXX shared module ../../../lib/_ITKRegistrationCommonPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationCommon && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKRegistrationCommonPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKRegistrationCommonPython.so CMakeFiles/ITKRegistrationCommonPython.dir/ITKRegistrationCommonPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkBlockMatchingImageFilterPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkCenteredTransformInitializerPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkCenteredVersorTransformInitializerPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkImageRegistrationMethodPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkImageToImageMetricPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkLandmarkBasedTransformInitializerPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkMattesMutualInformationImageToImageMetricPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkMeanReciprocalSquareDifferenceImageToImageMetricPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkMeanSquaresImageToImageMetricPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkMultiResolutionImageRegistrationMethodPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkMultiResolutionPyramidImageFilterPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkMutualInformationImageToImageMetricPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkNormalizedCorrelationImageToImageMetricPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkPDEDeformableRegistrationFunctionPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkRecursiveMultiResolutionPyramidImageFilterPython.cpp.o CMakeFiles/ITKRegistrationCommonPython.dir/itkTransformParametersAdaptorBasePython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 92%] Built target ITKRegistrationCommonPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologySwig.dir/build.make Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologySwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/MathematicalMorphology/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologySwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMathematicalMorphologySwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologySwig.dir/build.make Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologySwig.dir/build make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkLogImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLogImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 92%] Generating itkMaximumImageFilterPython.cpp, ../../../lib/itkMaximumImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 92%] Generating ../../Typedefs/itkFlatStructuringElement.i, ../../Typedefs/itkBlackTopHatImageFilter.i, ../../Typedefs/itkClosingByReconstructionImageFilter.i, ../../Typedefs/itkDoubleThresholdImageFilter.i, ../../Typedefs/itkGrayscaleConnectedClosingImageFilter.i, ../../Typedefs/itkGrayscaleConnectedOpeningImageFilter.i, ../../Typedefs/itkGrayscaleDilateImageFilter.i, ../../Typedefs/itkGrayscaleErodeImageFilter.i, ../../Typedefs/itkGrayscaleFillholeImageFilter.i, ../../Typedefs/itkGrayscaleFunctionDilateImageFilter.i, ../../Typedefs/itkGrayscaleFunctionErodeImageFilter.i, ../../Typedefs/itkGrayscaleGeodesicDilateImageFilter.i, ../../Typedefs/itkGrayscaleGeodesicErodeImageFilter.i, ../../Typedefs/itkGrayscaleGrindPeakImageFilter.i, ../../Typedefs/itkGrayscaleMorphologicalClosingImageFilter.i, ../../Typedefs/itkGrayscaleMorphologicalOpeningImageFilter.i, ../../Typedefs/itkHConcaveImageFilter.i, ../../Typedefs/itkHConvexImageFilter.i, ../../Typedefs/itkHMaximaImageFilter.i, ../../Typedefs/itkHMinimaImageFilter.i, ../../Typedefs/itkMorphologicalGradientImageFilter.i, ../../Typedefs/itkOpeningByReconstructionImageFilter.i, ../../Typedefs/itkReconstructionByDilationImageFilter.i, ../../Typedefs/itkReconstructionByErosionImageFilter.i, ../../Typedefs/itkRegionalMaximaImageFilter.i, ../../Typedefs/itkRegionalMinimaImageFilter.i, ../../Typedefs/itkValuedRegionalMaximaImageFilter.i, ../../Typedefs/itkValuedRegionalMinimaImageFilter.i, ../../Typedefs/itkWhiteTopHatImageFilter.i, ../../Typedefs/itkFlatStructuringElementSwigInterface.h, ../../Typedefs/itkBlackTopHatImageFilterSwigInterface.h, ../../Typedefs/itkClosingByReconstructionImageFilterSwigInterface.h, ../../Typedefs/itkDoubleThresholdImageFilterSwigInterface.h, ../../Typedefs/itkGrayscaleConnectedClosingImageFilterSwigInterface.h, ../../Typedefs/itkGrayscaleConnectedOpeningImageFilterSwigInterface.h, ../../Typedefs/itkGrayscaleDilateImageFilterSwigInterface.h, ../../Typedefs/itkGrayscaleErodeImageFilterSwigInterface.h, ../../Typedefs/itkGrayscaleFillholeImageFilterSwigInterface.h, ../../Typedefs/itkGrayscaleFunctionDilateImageFilterSwigInterface.h, ../../Typedefs/itkGrayscaleFunctionErodeImageFilterSwigInterface.h, ../../Typedefs/itkGrayscaleGeodesicDilateImageFilterSwigInterface.h, ../../Typedefs/itkGrayscaleGeodesicErodeImageFilterSwigInterface.h, ../../Typedefs/itkGrayscaleGrindPeakImageFilterSwigInterface.h, ../../Typedefs/itkGrayscaleMorphologicalClosingImageFilterSwigInterface.h, ../../Typedefs/itkGrayscaleMorphologicalOpeningImageFilterSwigInterface.h, ../../Typedefs/itkHConcaveImageFilterSwigInterface.h, ../../Typedefs/itkHConvexImageFilterSwigInterface.h, ../../Typedefs/itkHMaximaImageFilterSwigInterface.h, ../../Typedefs/itkHMinimaImageFilterSwigInterface.h, ../../Typedefs/itkMorphologicalGradientImageFilterSwigInterface.h, ../../Typedefs/itkOpeningByReconstructionImageFilterSwigInterface.h, ../../Typedefs/itkReconstructionByDilationImageFilterSwigInterface.h, ../../Typedefs/itkReconstructionByErosionImageFilterSwigInterface.h, ../../Typedefs/itkRegionalMaximaImageFilterSwigInterface.h, ../../Typedefs/itkRegionalMinimaImageFilterSwigInterface.h, ../../Typedefs/itkValuedRegionalMaximaImageFilterSwigInterface.h, ../../Typedefs/itkValuedRegionalMinimaImageFilterSwigInterface.h, ../../Typedefs/itkWhiteTopHatImageFilterSwigInterface.h, ../../Typedefs/itkFlatStructuringElement.idx, ../../Typedefs/itkBlackTopHatImageFilter.idx, ../../Typedefs/itkClosingByReconstructionImageFilter.idx, ../../Typedefs/itkDoubleThresholdImageFilter.idx, ../../Typedefs/itkGrayscaleConnectedClosingImageFilter.idx, ../../Typedefs/itkGrayscaleConnectedOpeningImageFilter.idx, ../../Typedefs/itkGrayscaleDilateImageFilter.idx, ../../Typedefs/itkGrayscaleErodeImageFilter.idx, ../../Typedefs/itkGrayscaleFillholeImageFilter.idx, ../../Typedefs/itkGrayscaleFunctionDilateImageFilter.idx, ../../Typedefs/itkGrayscaleFunctionErodeImageFilter.idx, ../../Typedefs/itkGrayscaleGeodesicDilateImageFilter.idx, ../../Typedefs/itkGrayscaleGeodesicErodeImageFilter.idx, ../../Typedefs/itkGrayscaleGrindPeakImageFilter.idx, ../../Typedefs/itkGrayscaleMorphologicalClosingImageFilter.idx, ../../Typedefs/itkGrayscaleMorphologicalOpeningImageFilter.idx, ../../Typedefs/itkHConcaveImageFilter.idx, ../../Typedefs/itkHConvexImageFilter.idx, ../../Typedefs/itkHMaximaImageFilter.idx, ../../Typedefs/itkHMinimaImageFilter.idx, ../../Typedefs/itkMorphologicalGradientImageFilter.idx, ../../Typedefs/itkOpeningByReconstructionImageFilter.idx, ../../Typedefs/itkReconstructionByDilationImageFilter.idx, ../../Typedefs/itkReconstructionByErosionImageFilter.idx, ../../Typedefs/itkRegionalMaximaImageFilter.idx, ../../Typedefs/itkRegionalMinimaImageFilter.idx, ../../Typedefs/itkValuedRegionalMaximaImageFilter.idx, ../../Typedefs/itkValuedRegionalMinimaImageFilter.idx, ../../Typedefs/itkWhiteTopHatImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkHistogramThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkHistogramThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkHistogramThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkMagnitudeAndPhaseToComplexImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMagnitudeAndPhaseToComplexImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkMinimumImageFilterPython.cpp, ../../../lib/itkMinimumImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/itkConnectedComponentImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkConnectedComponentImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkHardConnectedComponentImageFilterPython.cpp, ../../../lib/itkHardConnectedComponentImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKMathematicalMorphology.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKConnectedComponents.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFilterBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKThresholding.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkFlatStructuringElement;itkBlackTopHatImageFilter;itkClosingByReconstructionImageFilter;itkDoubleThresholdImageFilter;itkGrayscaleConnectedClosingImageFilter;itkGrayscaleConnectedOpeningImageFilter;itkGrayscaleDilateImageFilter;itkGrayscaleErodeImageFilter;itkGrayscaleFillholeImageFilter;itkGrayscaleFunctionDilateImageFilter;itkGrayscaleFunctionErodeImageFilter;itkGrayscaleGeodesicDilateImageFilter;itkGrayscaleGeodesicErodeImageFilter;itkGrayscaleGrindPeakImageFilter;itkGrayscaleMorphologicalClosingImageFilter;itkGrayscaleMorphologicalOpeningImageFilter;itkHConcaveImageFilter;itkHConvexImageFilter;itkHMaximaImageFilter;itkHMinimaImageFilter;itkMorphologicalGradientImageFilter;itkOpeningByReconstructionImageFilter;itkReconstructionByDilationImageFilter;itkReconstructionByErosionImageFilter;itkRegionalMaximaImageFilter;itkRegionalMinimaImageFilter;itkValuedRegionalMaximaImageFilter;itkValuedRegionalMinimaImageFilter;itkWhiteTopHatImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 93%] Built target ITKMathematicalMorphologySwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingSwig.dir/build.make Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FastMarching/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKFastMarching /<>/BUILD/Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFastMarchingSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingSwig.dir/build.make Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 93%] Generating ../../Typedefs/itkLevelSetNode.i, ../../Typedefs/itkNodePair.i, ../../Typedefs/itkFastMarchingStoppingCriterionBase.i, ../../Typedefs/ITKFastMarchingBase.i, ../../Typedefs/itkFastMarchingImageFilterBase.i, ../../Typedefs/itkFastMarchingExtensionImageFilter.i, ../../Typedefs/itkFastMarchingImageFilter.i, ../../Typedefs/itkFastMarchingImageToNodePairContainerAdaptor.i, ../../Typedefs/itkFastMarchingReachedTargetNodesStoppingCriterion.i, ../../Typedefs/itkFastMarchingThresholdStoppingCriterion.i, ../../Typedefs/itkFastMarchingUpwindGradientImageFilter.i, ../../Typedefs/itkFastMarchingUpwindGradientImageFilterBase.i, ../../Typedefs/itkLevelSetNodeSwigInterface.h, ../../Typedefs/itkNodePairSwigInterface.h, ../../Typedefs/itkFastMarchingStoppingCriterionBaseSwigInterface.h, ../../Typedefs/ITKFastMarchingBaseSwigInterface.h, ../../Typedefs/itkFastMarchingImageFilterBaseSwigInterface.h, ../../Typedefs/itkFastMarchingExtensionImageFilterSwigInterface.h, ../../Typedefs/itkFastMarchingImageFilterSwigInterface.h, ../../Typedefs/itkFastMarchingImageToNodePairContainerAdaptorSwigInterface.h, ../../Typedefs/itkFastMarchingReachedTargetNodesStoppingCriterionSwigInterface.h, ../../Typedefs/itkFastMarchingThresholdStoppingCriterionSwigInterface.h, ../../Typedefs/itkFastMarchingUpwindGradientImageFilterSwigInterface.h, ../../Typedefs/itkFastMarchingUpwindGradientImageFilterBaseSwigInterface.h, ../../Typedefs/itkLevelSetNode.idx, ../../Typedefs/itkNodePair.idx, ../../Typedefs/itkFastMarchingStoppingCriterionBase.idx, ../../Typedefs/ITKFastMarchingBase.idx, ../../Typedefs/itkFastMarchingImageFilterBase.idx, ../../Typedefs/itkFastMarchingExtensionImageFilter.idx, ../../Typedefs/itkFastMarchingImageFilter.idx, ../../Typedefs/itkFastMarchingImageToNodePairContainerAdaptor.idx, ../../Typedefs/itkFastMarchingReachedTargetNodesStoppingCriterion.idx, ../../Typedefs/itkFastMarchingThresholdStoppingCriterion.idx, ../../Typedefs/itkFastMarchingUpwindGradientImageFilter.idx, ../../Typedefs/itkFastMarchingUpwindGradientImageFilterBase.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKFastMarching.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKConnectedComponents.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKMesh.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKQuadEdgeMesh.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkLevelSetNode;itkNodePair;itkFastMarchingStoppingCriterionBase;ITKFastMarchingBase;itkFastMarchingImageFilterBase;itkFastMarchingExtensionImageFilter;itkFastMarchingImageFilter;itkFastMarchingImageToNodePairContainerAdaptor;itkFastMarchingReachedTargetNodesStoppingCriterion;itkFastMarchingThresholdStoppingCriterion;itkFastMarchingUpwindGradientImageFilter;itkFastMarchingUpwindGradientImageFilterBase" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 93%] Built target ITKFastMarchingSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersPython.dir/build.make Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkBayesianClassifierImageFilterPython.cpp, ../../../lib/itkBayesianClassifierImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkHistogramThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkHistogramThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkBinaryThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/itkHardConnectedComponentImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHardConnectedComponentImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkRelabelComponentImageFilterPython.cpp, ../../../lib/itkRelabelComponentImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/c++ -DITKRegionGrowingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/RegionGrowing/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegionGrowingPython.dir/itkVectorConfidenceConnectedImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegionGrowing/itkVectorConfidenceConnectedImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Linking CXX shared module ../../../lib/_ITKRegionGrowingPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegionGrowing && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKRegionGrowingPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKRegionGrowingPython.so CMakeFiles/ITKRegionGrowingPython.dir/ITKRegionGrowingPython.cpp.o CMakeFiles/ITKRegionGrowingPython.dir/itkConfidenceConnectedImageFilterPython.cpp.o CMakeFiles/ITKRegionGrowingPython.dir/itkConnectedThresholdImageFilterPython.cpp.o CMakeFiles/ITKRegionGrowingPython.dir/itkIsolatedConnectedImageFilterPython.cpp.o CMakeFiles/ITKRegionGrowingPython.dir/itkNeighborhoodConnectedImageFilterPython.cpp.o CMakeFiles/ITKRegionGrowingPython.dir/itkVectorConfidenceConnectedImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 93%] Built target ITKRegionGrowingPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/build.make Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkIterativeDeconvolutionImageFilterPython.cpp, ../../../lib/itkIterativeDeconvolutionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkBinaryThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkBinaryThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkBinaryThresholdProjectionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkIterativeDeconvolutionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIterativeDeconvolutionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkInverseDeconvolutionImageFilterPython.cpp, ../../../lib/itkInverseDeconvolutionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkBinaryThresholdProjectionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkBinaryThresholdProjectionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkHuangThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkHuangThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkHuangThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkHuangThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkInverseDeconvolutionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkInverseDeconvolutionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkLandweberDeconvolutionImageFilterPython.cpp, ../../../lib/itkLandweberDeconvolutionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkMaximumImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMaximumImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkModulusImageFilterPython.cpp, ../../../lib/itkModulusImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkMinimumImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMinimumImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkMultiplyImageFilterPython.cpp, ../../../lib/itkMultiplyImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkHuangThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkHuangThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkIntermodesThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkIntermodesThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkIntermodesThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkIntermodesThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKClassifiers/itkBayesianClassifierImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBayesianClassifierImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkBayesianClassifierInitializationImageFilterPython.cpp, ../../../lib/itkBayesianClassifierInitializationImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkLandweberDeconvolutionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLandweberDeconvolutionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkProjectedLandweberDeconvolutionImageFilterPython.cpp, ../../../lib/itkProjectedLandweberDeconvolutionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/itkRelabelComponentImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRelabelComponentImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkScalarConnectedComponentImageFilterPython.cpp, ../../../lib/itkScalarConnectedComponentImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkIntermodesThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkIntermodesThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkIsoDataThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkIsoDataThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkIsoDataThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkIsoDataThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkProjectedLandweberDeconvolutionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkProjectedLandweberDeconvolutionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkRichardsonLucyDeconvolutionImageFilterPython.cpp, ../../../lib/itkRichardsonLucyDeconvolutionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKClassifiers/itkBayesianClassifierInitializationImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBayesianClassifierInitializationImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkScalarImageKmeansImageFilterPython.cpp, ../../../lib/itkScalarImageKmeansImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkRichardsonLucyDeconvolutionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRichardsonLucyDeconvolutionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkTikhonovDeconvolutionImageFilterPython.cpp, ../../../lib/itkTikhonovDeconvolutionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkIsoDataThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkIsoDataThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkKappaSigmaThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKClassifiers/itkScalarImageKmeansImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScalarImageKmeansImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating ITKClassifiersPython.cpp, ../../../lib/ITKClassifiersPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKClassifiers/ITKClassifiersPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKClassifiers.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Classifiers/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKClassifiers /<>/BUILD/Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKClassifiersPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersPython.dir/build.make Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersPython.dir/ITKClassifiersPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKClassifiers && /usr/bin/c++ -DITKClassifiersPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/Classifiers/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKClassifiersPython.dir/ITKClassifiersPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKClassifiers/ITKClassifiersPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersPython.dir/itkBayesianClassifierImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkModulusImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkModulusImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkNaryAddImageFilterPython.cpp, ../../../lib/itkNaryAddImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkTikhonovDeconvolutionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTikhonovDeconvolutionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkWienerDeconvolutionImageFilterPython.cpp, ../../../lib/itkWienerDeconvolutionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkKappaSigmaThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkKappaSigmaThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkKittlerIllingworthThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkKittlerIllingworthThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkKittlerIllingworthThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkKittlerIllingworthThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkMaskImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMaskImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkNaryMaximumImageFilterPython.cpp, ../../../lib/itkNaryMaximumImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKClassifiers && /usr/bin/c++ -DITKClassifiersPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/Classifiers/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKClassifiersPython.dir/itkBayesianClassifierImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKClassifiers/itkBayesianClassifierImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersPython.dir/itkBayesianClassifierInitializationImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/itkScalarConnectedComponentImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScalarConnectedComponentImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkThresholdMaximumConnectedComponentsImageFilterPython.cpp, ../../../lib/itkThresholdMaximumConnectedComponentsImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkWienerDeconvolutionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkWienerDeconvolutionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating ITKDeconvolutionPython.cpp, ../../../lib/ITKDeconvolutionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDeconvolution/ITKDeconvolutionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKDeconvolution.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/Deconvolution/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKDeconvolution /<>/BUILD/Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDeconvolutionPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/build.make Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/ITKDeconvolutionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/c++ -DITKDeconvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Deconvolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDeconvolutionPython.dir/ITKDeconvolutionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDeconvolution/ITKDeconvolutionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/itkIterativeDeconvolutionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/c++ -DITKDeconvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Deconvolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDeconvolutionPython.dir/itkIterativeDeconvolutionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkIterativeDeconvolutionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/itkInverseDeconvolutionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkKittlerIllingworthThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkKittlerIllingworthThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkLiThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkLiThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkLiThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkLiThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/itkThresholdMaximumConnectedComponentsImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkThresholdMaximumConnectedComponentsImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkVectorConnectedComponentImageFilterPython.cpp, ../../../lib/itkVectorConnectedComponentImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkMaskNegatedImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMaskNegatedImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkNormalizeImageFilterPython.cpp, ../../../lib/itkNormalizeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkMultiplyImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMultiplyImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkNormalizeToConstantImageFilterPython.cpp, ../../../lib/itkNormalizeToConstantImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKClassifiers && /usr/bin/c++ -DITKClassifiersPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/Classifiers/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKClassifiersPython.dir/itkBayesianClassifierInitializationImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKClassifiers/itkBayesianClassifierInitializationImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKClassifiers/CMakeFiles/ITKClassifiersPython.dir/itkScalarImageKmeansImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/c++ -DITKDeconvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Deconvolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDeconvolutionPython.dir/itkInverseDeconvolutionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkInverseDeconvolutionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/itkLandweberDeconvolutionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkNormalizeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNormalizeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkNotImageFilterPython.cpp, ../../../lib/itkNotImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkLiThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkLiThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkMaximumEntropyThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkNormalizeToConstantImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNormalizeToConstantImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkOrImageFilterPython.cpp, ../../../lib/itkOrImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkMaximumEntropyThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkMaximumEntropyThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkMaximumEntropyThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/c++ -DITKDeconvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Deconvolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDeconvolutionPython.dir/itkLandweberDeconvolutionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkLandweberDeconvolutionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/itkProjectedLandweberDeconvolutionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKClassifiers && /usr/bin/c++ -DITKClassifiersPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/Classifiers/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKClassifiersPython.dir/itkScalarImageKmeansImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKClassifiers/itkScalarImageKmeansImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Linking CXX shared module ../../../lib/_ITKClassifiersPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKClassifiers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKClassifiersPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKClassifiersPython.so CMakeFiles/ITKClassifiersPython.dir/ITKClassifiersPython.cpp.o CMakeFiles/ITKClassifiersPython.dir/itkBayesianClassifierImageFilterPython.cpp.o CMakeFiles/ITKClassifiersPython.dir/itkBayesianClassifierInitializationImageFilterPython.cpp.o CMakeFiles/ITKClassifiersPython.dir/itkScalarImageKmeansImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 93%] Built target ITKClassifiersPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationPython.dir/build.make Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkDemonsRegistrationFilterPython.cpp, ../../../lib/itkDemonsRegistrationFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkNaryAddImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNaryAddImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkPowImageFilterPython.cpp, ../../../lib/itkPowImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkMaximumEntropyThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkMaximumEntropyThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkMomentsThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/c++ -DITKDeconvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Deconvolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDeconvolutionPython.dir/itkProjectedLandweberDeconvolutionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkProjectedLandweberDeconvolutionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/itkRichardsonLucyDeconvolutionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkMomentsThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkMomentsThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkMomentsThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkNaryMaximumImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNaryMaximumImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkRGBToLuminanceImageFilterPython.cpp, ../../../lib/itkRGBToLuminanceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/c++ -DITKDeconvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Deconvolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDeconvolutionPython.dir/itkRichardsonLucyDeconvolutionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkRichardsonLucyDeconvolutionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/itkTikhonovDeconvolutionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkMomentsThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkMomentsThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkOtsuMultipleThresholdsImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/itkVectorConnectedComponentImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorConnectedComponentImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating ITKConnectedComponentsPython.cpp, ../../../lib/ITKConnectedComponentsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/ITKConnectedComponentsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKConnectedComponents.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/ConnectedComponents/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKConnectedComponents /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKConnectedComponentsPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsPython.dir/build.make Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsPython.dir/ITKConnectedComponentsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/c++ -DITKConnectedComponentsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/ConnectedComponents/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConnectedComponentsPython.dir/ITKConnectedComponentsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/ITKConnectedComponentsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsPython.dir/itkConnectedComponentImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkOtsuMultipleThresholdsImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkOtsuMultipleThresholdsImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkOtsuThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/c++ -DITKDeconvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Deconvolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDeconvolutionPython.dir/itkTikhonovDeconvolutionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkTikhonovDeconvolutionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKDeconvolution/CMakeFiles/ITKDeconvolutionPython.dir/itkWienerDeconvolutionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkOtsuThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkOtsuThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkOtsuThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkOrImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkOrImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkRescaleIntensityImageFilterPython.cpp, ../../../lib/itkRescaleIntensityImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkNotImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNotImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkRoundImageFilterPython.cpp, ../../../lib/itkRoundImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/c++ -DITKDeconvolutionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Deconvolution/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDeconvolutionPython.dir/itkWienerDeconvolutionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDeconvolution/itkWienerDeconvolutionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Linking CXX shared module ../../../lib/_ITKDeconvolutionPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDeconvolution && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDeconvolutionPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKDeconvolutionPython.so CMakeFiles/ITKDeconvolutionPython.dir/ITKDeconvolutionPython.cpp.o CMakeFiles/ITKDeconvolutionPython.dir/itkIterativeDeconvolutionImageFilterPython.cpp.o CMakeFiles/ITKDeconvolutionPython.dir/itkInverseDeconvolutionImageFilterPython.cpp.o CMakeFiles/ITKDeconvolutionPython.dir/itkLandweberDeconvolutionImageFilterPython.cpp.o CMakeFiles/ITKDeconvolutionPython.dir/itkProjectedLandweberDeconvolutionImageFilterPython.cpp.o CMakeFiles/ITKDeconvolutionPython.dir/itkRichardsonLucyDeconvolutionImageFilterPython.cpp.o CMakeFiles/ITKDeconvolutionPython.dir/itkTikhonovDeconvolutionImageFilterPython.cpp.o CMakeFiles/ITKDeconvolutionPython.dir/itkWienerDeconvolutionImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 93%] Built target ITKDeconvolutionPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsSwig.dir/build.make Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Watersheds/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKWatersheds /<>/BUILD/Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKWatershedsSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsSwig.dir/build.make Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 93%] Generating ../../Typedefs/itkIsolatedWatershedImageFilter.i, ../../Typedefs/itkMorphologicalWatershedFromMarkersImageFilter.i, ../../Typedefs/itkMorphologicalWatershedImageFilter.i, ../../Typedefs/itkTobogganImageFilter.i, ../../Typedefs/itkWatershedImageFilter.i, ../../Typedefs/itkIsolatedWatershedImageFilterSwigInterface.h, ../../Typedefs/itkMorphologicalWatershedFromMarkersImageFilterSwigInterface.h, ../../Typedefs/itkMorphologicalWatershedImageFilterSwigInterface.h, ../../Typedefs/itkTobogganImageFilterSwigInterface.h, ../../Typedefs/itkWatershedImageFilterSwigInterface.h, ../../Typedefs/itkIsolatedWatershedImageFilter.idx, ../../Typedefs/itkMorphologicalWatershedFromMarkersImageFilter.idx, ../../Typedefs/itkMorphologicalWatershedImageFilter.idx, ../../Typedefs/itkTobogganImageFilter.idx, ../../Typedefs/itkWatershedImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkPowImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPowImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkShiftScaleImageFilterPython.cpp, ../../../lib/itkShiftScaleImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKWatersheds.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGradient.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKMathematicalMorphology.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKSmoothing.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKThresholding.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkIsolatedWatershedImageFilter;itkMorphologicalWatershedFromMarkersImageFilter;itkMorphologicalWatershedImageFilter;itkTobogganImageFilter;itkWatershedImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 93%] Built target ITKWatershedsSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Python.dir/build.make Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Python.dir/depend make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkImageToImageMetricv4Python.cpp, ../../../lib/itkImageToImageMetricv4Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkOtsuThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkOtsuThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkRenyiEntropyThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkRenyiEntropyThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkRenyiEntropyThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkRenyiEntropyThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkShiftScaleImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShiftScaleImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkSigmoidImageFilterPython.cpp, ../../../lib/itkSigmoidImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkRGBToLuminanceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRGBToLuminanceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkSinImageFilterPython.cpp, ../../../lib/itkSinImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkRenyiEntropyThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkRenyiEntropyThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkShanbhagThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkShanbhagThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkShanbhagThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkShanbhagThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/itkDemonsRegistrationFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDemonsRegistrationFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkLevelSetMotionRegistrationFilterPython.cpp, ../../../lib/itkLevelSetMotionRegistrationFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/c++ -DITKConnectedComponentsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/ConnectedComponents/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConnectedComponentsPython.dir/itkConnectedComponentImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/itkConnectedComponentImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsPython.dir/itkHardConnectedComponentImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/c++ -DITKConnectedComponentsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/ConnectedComponents/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConnectedComponentsPython.dir/itkHardConnectedComponentImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/itkHardConnectedComponentImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsPython.dir/itkRelabelComponentImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/c++ -DITKConnectedComponentsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/ConnectedComponents/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConnectedComponentsPython.dir/itkRelabelComponentImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/itkRelabelComponentImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsPython.dir/itkScalarConnectedComponentImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkShanbhagThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkShanbhagThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMetricsv4/itkImageToImageMetricv4Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageToImageMetricv4.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkMattesMutualInformationImageToImageMetricv4Python.cpp, ../../../lib/itkMattesMutualInformationImageToImageMetricv4Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkRoundImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRoundImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkSqrtImageFilterPython.cpp, ../../../lib/itkSqrtImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkThresholdLabelerImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/c++ -DITKConnectedComponentsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/ConnectedComponents/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConnectedComponentsPython.dir/itkScalarConnectedComponentImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/itkScalarConnectedComponentImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsPython.dir/itkThresholdMaximumConnectedComponentsImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkRescaleIntensityImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRescaleIntensityImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkSquareImageFilterPython.cpp, ../../../lib/itkSquareImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkThresholdLabelerImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkThresholdLabelerImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkTriangleThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkTriangleThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkTriangleThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkTriangleThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/c++ -DITKConnectedComponentsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/ConnectedComponents/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConnectedComponentsPython.dir/itkThresholdMaximumConnectedComponentsImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/itkThresholdMaximumConnectedComponentsImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKConnectedComponents/CMakeFiles/ITKConnectedComponentsPython.dir/itkVectorConnectedComponentImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkSigmoidImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSigmoidImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkSubtractImageFilterPython.cpp, ../../../lib/itkSubtractImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkSinImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSinImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkTanImageFilterPython.cpp, ../../../lib/itkTanImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkTriangleThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkTriangleThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkYenThresholdCalculatorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkYenThresholdCalculatorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkYenThresholdCalculatorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Building CXX object Wrapping/Modules/ITKThresholding/CMakeFiles/ITKThresholdingPython.dir/itkYenThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMetricsv4/itkMattesMutualInformationImageToImageMetricv4Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMattesMutualInformationImageToImageMetricv4.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkMeanSquaresImageToImageMetricv4Python.cpp, ../../../lib/itkMeanSquaresImageToImageMetricv4Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/c++ -DITKThresholdingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/Thresholding/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKThresholdingPython.dir/itkYenThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKThresholding/itkYenThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Linking CXX shared module ../../../lib/_ITKThresholdingPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKThresholding && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKThresholdingPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKThresholdingPython.so CMakeFiles/ITKThresholdingPython.dir/ITKThresholdingPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkHistogramThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkHistogramThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkBinaryThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkBinaryThresholdProjectionImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkHuangThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkHuangThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkIntermodesThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkIntermodesThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkIsoDataThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkIsoDataThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkKappaSigmaThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkKittlerIllingworthThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkKittlerIllingworthThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkLiThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkLiThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkMaximumEntropyThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkMaximumEntropyThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkMomentsThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkMomentsThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkOtsuMultipleThresholdsImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkOtsuThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkOtsuThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkRenyiEntropyThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkRenyiEntropyThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkShanbhagThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkShanbhagThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkThresholdLabelerImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkTriangleThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkTriangleThresholdImageFilterPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkYenThresholdCalculatorPython.cpp.o CMakeFiles/ITKThresholdingPython.dir/itkYenThresholdImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 93%] Built target ITKThresholdingPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4Swig.dir/build.make Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4Swig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/RegistrationMethodsv4/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4 /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4Swig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationMethodsv4Swig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4Swig.dir/build.make Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4Swig.dir/build make[3]: Entering directory '/<>/BUILD' [ 93%] Generating ../../Typedefs/itkImageRegistrationMethodv4.i, ../../Typedefs/itkImageRegistrationMethodv4SwigInterface.h, ../../Typedefs/itkImageRegistrationMethodv4.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4 && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKRegistrationMethodsv4.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKMetricsv4.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKOptimizersv4.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkImageRegistrationMethodv4 make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 93%] Built target ITKRegistrationMethodsv4Swig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/build.make Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkFlatStructuringElementPython.cpp, ../../../lib/itkFlatStructuringElementPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkSqrtImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSqrtImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkTernaryAddImageFilterPython.cpp, ../../../lib/itkTernaryAddImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkSquareImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSquareImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkTernaryMagnitudeImageFilterPython.cpp, ../../../lib/itkTernaryMagnitudeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkFlatStructuringElementPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFlatStructuringElement.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkBlackTopHatImageFilterPython.cpp, ../../../lib/itkBlackTopHatImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/c++ -DITKConnectedComponentsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/ConnectedComponents/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKConnectedComponentsPython.dir/itkVectorConnectedComponentImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKConnectedComponents/itkVectorConnectedComponentImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Linking CXX shared module ../../../lib/_ITKConnectedComponentsPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKConnectedComponents && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKConnectedComponentsPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKConnectedComponentsPython.so CMakeFiles/ITKConnectedComponentsPython.dir/ITKConnectedComponentsPython.cpp.o CMakeFiles/ITKConnectedComponentsPython.dir/itkConnectedComponentImageFilterPython.cpp.o CMakeFiles/ITKConnectedComponentsPython.dir/itkHardConnectedComponentImageFilterPython.cpp.o CMakeFiles/ITKConnectedComponentsPython.dir/itkRelabelComponentImageFilterPython.cpp.o CMakeFiles/ITKConnectedComponentsPython.dir/itkScalarConnectedComponentImageFilterPython.cpp.o CMakeFiles/ITKConnectedComponentsPython.dir/itkThresholdMaximumConnectedComponentsImageFilterPython.cpp.o CMakeFiles/ITKConnectedComponentsPython.dir/itkVectorConnectedComponentImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 93%] Built target ITKConnectedComponentsPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologySwig.dir/build.make Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologySwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologySwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBinaryMathematicalMorphologySwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologySwig.dir/build.make Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologySwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 93%] Generating ../../Typedefs/itkBinaryClosingByReconstructionImageFilter.i, ../../Typedefs/itkBinaryDilateImageFilter.i, ../../Typedefs/itkBinaryErodeImageFilter.i, ../../Typedefs/itkBinaryMorphologicalClosingImageFilter.i, ../../Typedefs/itkBinaryMorphologicalOpeningImageFilter.i, ../../Typedefs/itkBinaryOpeningByReconstructionImageFilter.i, ../../Typedefs/itkBinaryPruningImageFilter.i, ../../Typedefs/itkBinaryThinningImageFilter.i, ../../Typedefs/itkDilateObjectMorphologyImageFilter.i, ../../Typedefs/itkErodeObjectMorphologyImageFilter.i, ../../Typedefs/itkBinaryClosingByReconstructionImageFilterSwigInterface.h, ../../Typedefs/itkBinaryDilateImageFilterSwigInterface.h, ../../Typedefs/itkBinaryErodeImageFilterSwigInterface.h, ../../Typedefs/itkBinaryMorphologicalClosingImageFilterSwigInterface.h, ../../Typedefs/itkBinaryMorphologicalOpeningImageFilterSwigInterface.h, ../../Typedefs/itkBinaryOpeningByReconstructionImageFilterSwigInterface.h, ../../Typedefs/itkBinaryPruningImageFilterSwigInterface.h, ../../Typedefs/itkBinaryThinningImageFilterSwigInterface.h, ../../Typedefs/itkDilateObjectMorphologyImageFilterSwigInterface.h, ../../Typedefs/itkErodeObjectMorphologyImageFilterSwigInterface.h, ../../Typedefs/itkBinaryClosingByReconstructionImageFilter.idx, ../../Typedefs/itkBinaryDilateImageFilter.idx, ../../Typedefs/itkBinaryErodeImageFilter.idx, ../../Typedefs/itkBinaryMorphologicalClosingImageFilter.idx, ../../Typedefs/itkBinaryMorphologicalOpeningImageFilter.idx, ../../Typedefs/itkBinaryOpeningByReconstructionImageFilter.idx, ../../Typedefs/itkBinaryPruningImageFilter.idx, ../../Typedefs/itkBinaryThinningImageFilter.idx, ../../Typedefs/itkDilateObjectMorphologyImageFilter.idx, ../../Typedefs/itkErodeObjectMorphologyImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/itkLevelSetMotionRegistrationFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLevelSetMotionRegistrationFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkPDEDeformableRegistrationFilterPython.cpp, ../../../lib/itkPDEDeformableRegistrationFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkSubtractImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSubtractImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkTernaryMagnitudeSquaredImageFilterPython.cpp, ../../../lib/itkTernaryMagnitudeSquaredImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKBinaryMathematicalMorphology.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKLabelMap.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKMathematicalMorphology.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkBinaryClosingByReconstructionImageFilter;itkBinaryDilateImageFilter;itkBinaryErodeImageFilter;itkBinaryMorphologicalClosingImageFilter;itkBinaryMorphologicalOpeningImageFilter;itkBinaryOpeningByReconstructionImageFilter;itkBinaryPruningImageFilter;itkBinaryThinningImageFilter;itkDilateObjectMorphologyImageFilter;itkErodeObjectMorphologyImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 93%] Built target ITKBinaryMathematicalMorphologySwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/build.make Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkLevelSetNodePython.cpp, ../../../lib/itkLevelSetNodePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkLevelSetNodePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLevelSetNode.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkNodePairPython.cpp, ../../../lib/itkNodePairPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkNodePairPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNodePair.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkFastMarchingStoppingCriterionBasePython.cpp, ../../../lib/itkFastMarchingStoppingCriterionBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkTanImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTanImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkVectorExpandImageFilterPython.cpp, ../../../lib/itkVectorExpandImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkBlackTopHatImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBlackTopHatImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating itkClosingByReconstructionImageFilterPython.cpp, ../../../lib/itkClosingByReconstructionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingStoppingCriterionBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFastMarchingStoppingCriterionBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating ITKFastMarchingBasePython.cpp, ../../../lib/ITKFastMarchingBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMetricsv4/itkMeanSquaresImageToImageMetricv4Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMeanSquaresImageToImageMetricv4.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 93%] Generating ITKMetricsv4Python.cpp, ../../../lib/ITKMetricsv4Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMetricsv4/ITKMetricsv4Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKMetricsv4.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/Metricsv4/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKMetricsv4 /<>/BUILD/Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Python.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMetricsv4Python make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Python.dir/build.make Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Python.dir/build make[3]: Entering directory '/<>/BUILD' [ 94%] Building CXX object Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Python.dir/ITKMetricsv4Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMetricsv4 && /usr/bin/c++ -DITKMetricsv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Metricsv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMetricsv4Python.dir/ITKMetricsv4Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMetricsv4/ITKMetricsv4Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Building CXX object Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Python.dir/itkImageToImageMetricv4Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkVectorExpandImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorExpandImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkVectorIndexSelectionCastImageFilterPython.cpp, ../../../lib/itkVectorIndexSelectionCastImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMetricsv4 && /usr/bin/c++ -DITKMetricsv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Metricsv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMetricsv4Python.dir/itkImageToImageMetricv4Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMetricsv4/itkImageToImageMetricv4Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Building CXX object Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Python.dir/itkMattesMutualInformationImageToImageMetricv4Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkClosingByReconstructionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkClosingByReconstructionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkDoubleThresholdImageFilterPython.cpp, ../../../lib/itkDoubleThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/ITKFastMarchingBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKFastMarchingBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkFastMarchingImageFilterBasePython.cpp, ../../../lib/itkFastMarchingImageFilterBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMetricsv4 && /usr/bin/c++ -DITKMetricsv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Metricsv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMetricsv4Python.dir/itkMattesMutualInformationImageToImageMetricv4Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMetricsv4/itkMattesMutualInformationImageToImageMetricv4Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Building CXX object Wrapping/Modules/ITKMetricsv4/CMakeFiles/ITKMetricsv4Python.dir/itkMeanSquaresImageToImageMetricv4Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkDoubleThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDoubleThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkGrayscaleConnectedClosingImageFilterPython.cpp, ../../../lib/itkGrayscaleConnectedClosingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingImageFilterBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFastMarchingImageFilterBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkFastMarchingExtensionImageFilterPython.cpp, ../../../lib/itkFastMarchingExtensionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkTernaryAddImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTernaryAddImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkVectorMagnitudeImageFilterPython.cpp, ../../../lib/itkVectorMagnitudeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMetricsv4 && /usr/bin/c++ -DITKMetricsv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/Metricsv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMetricsv4Python.dir/itkMeanSquaresImageToImageMetricv4Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMetricsv4/itkMeanSquaresImageToImageMetricv4Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Linking CXX shared module ../../../lib/_ITKMetricsv4Python.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMetricsv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMetricsv4Python.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKMetricsv4Python.so CMakeFiles/ITKMetricsv4Python.dir/ITKMetricsv4Python.cpp.o CMakeFiles/ITKMetricsv4Python.dir/itkImageToImageMetricv4Python.cpp.o CMakeFiles/ITKMetricsv4Python.dir/itkMattesMutualInformationImageToImageMetricv4Python.cpp.o CMakeFiles/ITKMetricsv4Python.dir/itkMeanSquaresImageToImageMetricv4Python.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 94%] Built target ITKMetricsv4Python make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionSwig.dir/build.make Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFusion/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageFusion /<>/BUILD/Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFusionSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionSwig.dir/build.make Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 94%] Generating ../../Typedefs/itkLabelMapContourOverlayImageFilter.i, ../../Typedefs/itkLabelMapOverlayImageFilter.i, ../../Typedefs/itkLabelMapToRGBImageFilter.i, ../../Typedefs/itkLabelOverlayImageFilter.i, ../../Typedefs/itkLabelToRGBImageFilter.i, ../../Typedefs/itkLabelMapContourOverlayImageFilterSwigInterface.h, ../../Typedefs/itkLabelMapOverlayImageFilterSwigInterface.h, ../../Typedefs/itkLabelMapToRGBImageFilterSwigInterface.h, ../../Typedefs/itkLabelOverlayImageFilterSwigInterface.h, ../../Typedefs/itkLabelToRGBImageFilterSwigInterface.h, ../../Typedefs/itkLabelMapContourOverlayImageFilter.idx, ../../Typedefs/itkLabelMapOverlayImageFilter.idx, ../../Typedefs/itkLabelMapToRGBImageFilter.idx, ../../Typedefs/itkLabelOverlayImageFilter.idx, ../../Typedefs/itkLabelToRGBImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleConnectedClosingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGrayscaleConnectedClosingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkGrayscaleConnectedOpeningImageFilterPython.cpp, ../../../lib/itkGrayscaleConnectedOpeningImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFusion.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKBinaryMathematicalMorphology.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageLabel.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkLabelMapContourOverlayImageFilter;itkLabelMapOverlayImageFilter;itkLabelMapToRGBImageFilter;itkLabelOverlayImageFilter;itkLabelToRGBImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 94%] Built target ITKImageFusionSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsPython.dir/build.make Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkIsolatedWatershedImageFilterPython.cpp, ../../../lib/itkIsolatedWatershedImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingExtensionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFastMarchingExtensionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkFastMarchingImageFilterPython.cpp, ../../../lib/itkFastMarchingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkTernaryMagnitudeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTernaryMagnitudeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkMorphologicalWatershedFromMarkersImageFilterPython.cpp, ../../../lib/itkMorphologicalWatershedFromMarkersImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleConnectedOpeningImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGrayscaleConnectedOpeningImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkGrayscaleDilateImageFilterPython.cpp, ../../../lib/itkGrayscaleDilateImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKWatersheds/itkIsolatedWatershedImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIsolatedWatershedImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkMorphologicalWatershedImageFilterPython.cpp, ../../../lib/itkMorphologicalWatershedImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkTernaryMagnitudeSquaredImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTernaryMagnitudeSquaredImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkVectorRescaleIntensityImageFilterPython.cpp, ../../../lib/itkVectorRescaleIntensityImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFastMarchingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkFastMarchingImageToNodePairContainerAdaptorPython.cpp, ../../../lib/itkFastMarchingImageToNodePairContainerAdaptorPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKWatersheds/itkMorphologicalWatershedFromMarkersImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMorphologicalWatershedFromMarkersImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkTobogganImageFilterPython.cpp, ../../../lib/itkTobogganImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleDilateImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGrayscaleDilateImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkGrayscaleErodeImageFilterPython.cpp, ../../../lib/itkGrayscaleErodeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKWatersheds/itkMorphologicalWatershedImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMorphologicalWatershedImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkWatershedImageFilterPython.cpp, ../../../lib/itkWatershedImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingImageToNodePairContainerAdaptorPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFastMarchingImageToNodePairContainerAdaptor.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkFastMarchingReachedTargetNodesStoppingCriterionPython.cpp, ../../../lib/itkFastMarchingReachedTargetNodesStoppingCriterionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKWatersheds/itkTobogganImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkTobogganImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkFastMarchingThresholdStoppingCriterionPython.cpp, ../../../lib/itkFastMarchingThresholdStoppingCriterionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingReachedTargetNodesStoppingCriterionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFastMarchingReachedTargetNodesStoppingCriterion.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 94%] Generating itkFastMarchingUpwindGradientImageFilterPython.cpp, ../../../lib/itkFastMarchingUpwindGradientImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingThresholdStoppingCriterionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFastMarchingThresholdStoppingCriterion.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkFastMarchingUpwindGradientImageFilterBasePython.cpp, ../../../lib/itkFastMarchingUpwindGradientImageFilterBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/itkPDEDeformableRegistrationFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkPDEDeformableRegistrationFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkSymmetricForcesDemonsRegistrationFilterPython.cpp, ../../../lib/itkSymmetricForcesDemonsRegistrationFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKWatersheds/itkWatershedImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkWatershedImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating ITKWatershedsPython.cpp, ../../../lib/ITKWatershedsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKWatersheds/ITKWatershedsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKWatersheds.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/Watersheds/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKWatersheds /<>/BUILD/Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKWatershedsPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsPython.dir/build.make Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsPython.dir/ITKWatershedsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleErodeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGrayscaleErodeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkGrayscaleFillholeImageFilterPython.cpp, ../../../lib/itkGrayscaleFillholeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/c++ -DITKWatershedsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/Watersheds/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKWatershedsPython.dir/ITKWatershedsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKWatersheds/ITKWatershedsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsPython.dir/itkIsolatedWatershedImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingUpwindGradientImageFilterBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFastMarchingUpwindGradientImageFilterBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsPython.dir/itkMorphologicalWatershedFromMarkersImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingUpwindGradientImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFastMarchingUpwindGradientImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating ITKFastMarchingPython.cpp, ../../../lib/ITKFastMarchingPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKFastMarching/ITKFastMarchingPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKFastMarching.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/FastMarching/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKFastMarching /<>/BUILD/Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKFastMarchingPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/build.make Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/ITKFastMarchingPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/ITKFastMarchingPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/ITKFastMarchingPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/itkLevelSetNodePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/itkLevelSetNodePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkLevelSetNodePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/itkNodePairPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/itkNodePairPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkNodePairPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingStoppingCriterionBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingStoppingCriterionBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingStoppingCriterionBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/ITKFastMarchingBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleFillholeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGrayscaleFillholeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkGrayscaleFunctionDilateImageFilterPython.cpp, ../../../lib/itkGrayscaleFunctionDilateImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/c++ -DITKWatershedsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/Watersheds/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKWatershedsPython.dir/itkIsolatedWatershedImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKWatersheds/itkIsolatedWatershedImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsPython.dir/itkMorphologicalWatershedImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkVectorMagnitudeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorMagnitudeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkWeightedAddImageFilterPython.cpp, ../../../lib/itkWeightedAddImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/ITKFastMarchingBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/ITKFastMarchingBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingImageFilterBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingImageFilterBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingImageFilterBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingExtensionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/c++ -DITKWatershedsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/Watersheds/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKWatershedsPython.dir/itkMorphologicalWatershedFromMarkersImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKWatersheds/itkMorphologicalWatershedFromMarkersImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsPython.dir/itkTobogganImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingExtensionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingExtensionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/c++ -DITKWatershedsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/Watersheds/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKWatershedsPython.dir/itkTobogganImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKWatersheds/itkTobogganImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKWatersheds/CMakeFiles/ITKWatershedsPython.dir/itkWatershedImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleFunctionDilateImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGrayscaleFunctionDilateImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkGrayscaleFunctionErodeImageFilterPython.cpp, ../../../lib/itkGrayscaleFunctionErodeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkVectorIndexSelectionCastImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorIndexSelectionCastImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkXorImageFilterPython.cpp, ../../../lib/itkXorImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingImageToNodePairContainerAdaptorPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingImageToNodePairContainerAdaptorPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingImageToNodePairContainerAdaptorPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingReachedTargetNodesStoppingCriterionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkVectorRescaleIntensityImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorRescaleIntensityImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingThresholdStoppingCriterionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingReachedTargetNodesStoppingCriterionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingReachedTargetNodesStoppingCriterionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingUpwindGradientImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingThresholdStoppingCriterionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingThresholdStoppingCriterionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKFastMarching/CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingUpwindGradientImageFilterBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingUpwindGradientImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingUpwindGradientImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkGrayscaleGeodesicDilateImageFilterPython.cpp, ../../../lib/itkGrayscaleGeodesicDilateImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/c++ -DITKFastMarchingPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/FastMarching/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingUpwindGradientImageFilterBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKFastMarching/itkFastMarchingUpwindGradientImageFilterBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Linking CXX shared module ../../../lib/_ITKFastMarchingPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKFastMarching && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKFastMarchingPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKFastMarchingPython.so CMakeFiles/ITKFastMarchingPython.dir/ITKFastMarchingPython.cpp.o CMakeFiles/ITKFastMarchingPython.dir/itkLevelSetNodePython.cpp.o CMakeFiles/ITKFastMarchingPython.dir/itkNodePairPython.cpp.o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingStoppingCriterionBasePython.cpp.o CMakeFiles/ITKFastMarchingPython.dir/ITKFastMarchingBasePython.cpp.o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingImageFilterBasePython.cpp.o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingExtensionImageFilterPython.cpp.o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingImageFilterPython.cpp.o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingImageToNodePairContainerAdaptorPython.cpp.o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingReachedTargetNodesStoppingCriterionPython.cpp.o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingThresholdStoppingCriterionPython.cpp.o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingUpwindGradientImageFilterPython.cpp.o CMakeFiles/ITKFastMarchingPython.dir/itkFastMarchingUpwindGradientImageFilterBasePython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 95%] Built target ITKFastMarchingPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4Python.dir/build.make Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4Python.dir/depend make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkImageRegistrationMethodv4Python.cpp, ../../../lib/itkImageRegistrationMethodv4Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleFunctionErodeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGrayscaleFunctionErodeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkGrayscaleGeodesicErodeImageFilterPython.cpp, ../../../lib/itkGrayscaleGeodesicErodeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/c++ -DITKWatershedsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/Watersheds/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKWatershedsPython.dir/itkMorphologicalWatershedImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKWatersheds/itkMorphologicalWatershedImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkGrayscaleGrindPeakImageFilterPython.cpp, ../../../lib/itkGrayscaleGrindPeakImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/c++ -DITKWatershedsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/Watersheds/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKWatershedsPython.dir/itkWatershedImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKWatersheds/itkWatershedImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Linking CXX shared module ../../../lib/_ITKWatershedsPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKWatersheds && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKWatershedsPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKWatershedsPython.so CMakeFiles/ITKWatershedsPython.dir/ITKWatershedsPython.cpp.o CMakeFiles/ITKWatershedsPython.dir/itkIsolatedWatershedImageFilterPython.cpp.o CMakeFiles/ITKWatershedsPython.dir/itkMorphologicalWatershedFromMarkersImageFilterPython.cpp.o CMakeFiles/ITKWatershedsPython.dir/itkMorphologicalWatershedImageFilterPython.cpp.o CMakeFiles/ITKWatershedsPython.dir/itkTobogganImageFilterPython.cpp.o CMakeFiles/ITKWatershedsPython.dir/itkWatershedImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 95%] Built target ITKWatershedsPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/build.make Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkBinaryClosingByReconstructionImageFilterPython.cpp, ../../../lib/itkBinaryClosingByReconstructionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4/itkImageRegistrationMethodv4Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkImageRegistrationMethodv4.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating ITKRegistrationMethodsv4Python.cpp, ../../../lib/ITKRegistrationMethodsv4Python.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4/ITKRegistrationMethodsv4Python.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKRegistrationMethodsv4.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/RegistrationMethodsv4/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4 /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4Python.dir/DependInfo.cmake --color= Scanning dependencies of target ITKRegistrationMethodsv4Python make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4Python.dir/build.make Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4Python.dir/build make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4Python.dir/ITKRegistrationMethodsv4Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4 && /usr/bin/c++ -DITKRegistrationMethodsv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/RegistrationMethodsv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationMethodsv4Python.dir/ITKRegistrationMethodsv4Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4/ITKRegistrationMethodsv4Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKRegistrationMethodsv4/CMakeFiles/ITKRegistrationMethodsv4Python.dir/itkImageRegistrationMethodv4Python.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleGeodesicDilateImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGrayscaleGeodesicDilateImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkGrayscaleMorphologicalClosingImageFilterPython.cpp, ../../../lib/itkGrayscaleMorphologicalClosingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleGeodesicErodeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGrayscaleGeodesicErodeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkGrayscaleMorphologicalOpeningImageFilterPython.cpp, ../../../lib/itkGrayscaleMorphologicalOpeningImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleGrindPeakImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGrayscaleGrindPeakImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkHConcaveImageFilterPython.cpp, ../../../lib/itkHConcaveImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryClosingByReconstructionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryClosingByReconstructionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkBinaryDilateImageFilterPython.cpp, ../../../lib/itkBinaryDilateImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleMorphologicalClosingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGrayscaleMorphologicalClosingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkHConvexImageFilterPython.cpp, ../../../lib/itkHConvexImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleMorphologicalOpeningImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGrayscaleMorphologicalOpeningImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkHMaximaImageFilterPython.cpp, ../../../lib/itkHMaximaImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkWeightedAddImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkWeightedAddImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkHMinimaImageFilterPython.cpp, ../../../lib/itkHMinimaImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkHConcaveImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHConcaveImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkMorphologicalGradientImageFilterPython.cpp, ../../../lib/itkMorphologicalGradientImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4 && /usr/bin/c++ -DITKRegistrationMethodsv4Python_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/RegistrationMethodsv4/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKRegistrationMethodsv4Python.dir/itkImageRegistrationMethodv4Python.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4/itkImageRegistrationMethodv4Python.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Linking CXX shared module ../../../lib/_ITKRegistrationMethodsv4Python.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKRegistrationMethodsv4 && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKRegistrationMethodsv4Python.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKRegistrationMethodsv4Python.so CMakeFiles/ITKRegistrationMethodsv4Python.dir/ITKRegistrationMethodsv4Python.cpp.o CMakeFiles/ITKRegistrationMethodsv4Python.dir/itkImageRegistrationMethodv4Python.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 95%] Built target ITKRegistrationMethodsv4Python make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapSwig.dir/build.make Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DistanceMap/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKDistanceMap /<>/BUILD/Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDistanceMapSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapSwig.dir/build.make Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 95%] Generating ../../Typedefs/itkApproximateSignedDistanceMapImageFilter.i, ../../Typedefs/itkContourDirectedMeanDistanceImageFilter.i, ../../Typedefs/itkContourMeanDistanceImageFilter.i, ../../Typedefs/itkDanielssonDistanceMapImageFilter.i, ../../Typedefs/itkDirectedHausdorffDistanceImageFilter.i, ../../Typedefs/itkFastChamferDistanceImageFilter.i, ../../Typedefs/itkHausdorffDistanceImageFilter.i, ../../Typedefs/itkIsoContourDistanceImageFilter.i, ../../Typedefs/itkSignedDanielssonDistanceMapImageFilter.i, ../../Typedefs/itkSignedMaurerDistanceMapImageFilter.i, ../../Typedefs/itkApproximateSignedDistanceMapImageFilterSwigInterface.h, ../../Typedefs/itkContourDirectedMeanDistanceImageFilterSwigInterface.h, ../../Typedefs/itkContourMeanDistanceImageFilterSwigInterface.h, ../../Typedefs/itkDanielssonDistanceMapImageFilterSwigInterface.h, ../../Typedefs/itkDirectedHausdorffDistanceImageFilterSwigInterface.h, ../../Typedefs/itkFastChamferDistanceImageFilterSwigInterface.h, ../../Typedefs/itkHausdorffDistanceImageFilterSwigInterface.h, ../../Typedefs/itkIsoContourDistanceImageFilterSwigInterface.h, ../../Typedefs/itkSignedDanielssonDistanceMapImageFilterSwigInterface.h, ../../Typedefs/itkSignedMaurerDistanceMapImageFilterSwigInterface.h, ../../Typedefs/itkApproximateSignedDistanceMapImageFilter.idx, ../../Typedefs/itkContourDirectedMeanDistanceImageFilter.idx, ../../Typedefs/itkContourMeanDistanceImageFilter.idx, ../../Typedefs/itkDanielssonDistanceMapImageFilter.idx, ../../Typedefs/itkDirectedHausdorffDistanceImageFilter.idx, ../../Typedefs/itkFastChamferDistanceImageFilter.idx, ../../Typedefs/itkHausdorffDistanceImageFilter.idx, ../../Typedefs/itkIsoContourDistanceImageFilter.idx, ../../Typedefs/itkSignedDanielssonDistanceMapImageFilter.idx, ../../Typedefs/itkSignedMaurerDistanceMapImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkHConvexImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHConvexImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkOpeningByReconstructionImageFilterPython.cpp, ../../../lib/itkOpeningByReconstructionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryDilateImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryDilateImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkBinaryErodeImageFilterPython.cpp, ../../../lib/itkBinaryErodeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKDistanceMap.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKBinaryMathematicalMorphology.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageLabel.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKNarrowBand.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkApproximateSignedDistanceMapImageFilter;itkContourDirectedMeanDistanceImageFilter;itkContourMeanDistanceImageFilter;itkDanielssonDistanceMapImageFilter;itkDirectedHausdorffDistanceImageFilter;itkFastChamferDistanceImageFilter;itkHausdorffDistanceImageFilter;itkIsoContourDistanceImageFilter;itkSignedDanielssonDistanceMapImageFilter;itkSignedMaurerDistanceMapImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 95%] Built target ITKDistanceMapSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionPython.dir/build.make Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkLabelMapContourOverlayImageFilterPython.cpp, ../../../lib/itkLabelMapContourOverlayImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkHMaximaImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHMaximaImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkReconstructionByDilationImageFilterPython.cpp, ../../../lib/itkReconstructionByDilationImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkHMinimaImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHMinimaImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkReconstructionByErosionImageFilterPython.cpp, ../../../lib/itkReconstructionByErosionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/itkSymmetricForcesDemonsRegistrationFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSymmetricForcesDemonsRegistrationFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating ITKPDEDeformableRegistrationPython.cpp, ../../../lib/ITKPDEDeformableRegistrationPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/ITKPDEDeformableRegistrationPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKPDEDeformableRegistration.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Registration/PDEDeformable/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKPDEDeformableRegistrationPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationPython.dir/build.make Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationPython.dir/ITKPDEDeformableRegistrationPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration && /usr/bin/c++ -DITKPDEDeformableRegistrationPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/PDEDeformable/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPDEDeformableRegistrationPython.dir/ITKPDEDeformableRegistrationPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/ITKPDEDeformableRegistrationPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationPython.dir/itkDemonsRegistrationFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkXorImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkXorImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating ITKImageIntensityPython.cpp, ../../../lib/ITKImageIntensityPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageIntensity/ITKImageIntensityPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkMorphologicalGradientImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMorphologicalGradientImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkRegionalMaximaImageFilterPython.cpp, ../../../lib/itkRegionalMaximaImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageIntensity/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageIntensity /<>/BUILD/Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageIntensityPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/build.make Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/ITKImageIntensityPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/ITKImageIntensityPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/ITKImageIntensityPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkAbsImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFusion/itkLabelMapContourOverlayImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelMapContourOverlayImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkLabelMapOverlayImageFilterPython.cpp, ../../../lib/itkLabelMapOverlayImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkOpeningByReconstructionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkOpeningByReconstructionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkRegionalMinimaImageFilterPython.cpp, ../../../lib/itkRegionalMinimaImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryErodeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryErodeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkBinaryMorphologicalClosingImageFilterPython.cpp, ../../../lib/itkBinaryMorphologicalClosingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkAbsImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAbsImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkAcosImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkReconstructionByDilationImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkReconstructionByDilationImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkValuedRegionalMaximaImageFilterPython.cpp, ../../../lib/itkValuedRegionalMaximaImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFusion/itkLabelMapOverlayImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelMapOverlayImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkLabelMapToRGBImageFilterPython.cpp, ../../../lib/itkLabelMapToRGBImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkReconstructionByErosionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkReconstructionByErosionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkValuedRegionalMinimaImageFilterPython.cpp, ../../../lib/itkValuedRegionalMinimaImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkRegionalMaximaImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRegionalMaximaImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkWhiteTopHatImageFilterPython.cpp, ../../../lib/itkWhiteTopHatImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkAcosImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAcosImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkAddImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkRegionalMinimaImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRegionalMinimaImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkAndImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFusion/itkLabelMapToRGBImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelMapToRGBImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkLabelOverlayImageFilterPython.cpp, ../../../lib/itkLabelOverlayImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkAddImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAddImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkAsinImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryMorphologicalClosingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryMorphologicalClosingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkBinaryMorphologicalOpeningImageFilterPython.cpp, ../../../lib/itkBinaryMorphologicalOpeningImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkAndImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAndImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkAtan2ImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkValuedRegionalMaximaImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkValuedRegionalMaximaImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkAtanImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkValuedRegionalMinimaImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkValuedRegionalMinimaImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkBinaryMagnitudeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkWhiteTopHatImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkWhiteTopHatImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating ITKMathematicalMorphologyPython.cpp, ../../../lib/ITKMathematicalMorphologyPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/ITKMathematicalMorphologyPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKMathematicalMorphology.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkAtan2ImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAtan2ImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkBoundedReciprocalImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkAsinImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAsinImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkClampImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/MathematicalMorphology/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKMathematicalMorphologyPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/build.make Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/ITKMathematicalMorphologyPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkAtanImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkAtanImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkComplexToImaginaryImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/ITKMathematicalMorphologyPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/ITKMathematicalMorphologyPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkFlatStructuringElementPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkComplexToImaginaryImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkComplexToImaginaryImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkComplexToModulusImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkBinaryMagnitudeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkBinaryMagnitudeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkComplexToPhaseImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkBoundedReciprocalImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkBoundedReciprocalImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkComplexToRealImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryMorphologicalOpeningImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryMorphologicalOpeningImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkBinaryOpeningByReconstructionImageFilterPython.cpp, ../../../lib/itkBinaryOpeningByReconstructionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkComplexToPhaseImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkComplexToPhaseImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkConstrainedValueAdditionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkComplexToModulusImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkComplexToModulusImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkConstrainedValueDifferenceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkComplexToRealImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkComplexToRealImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkCosImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkFlatStructuringElementPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkFlatStructuringElementPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkBlackTopHatImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration && /usr/bin/c++ -DITKPDEDeformableRegistrationPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/PDEDeformable/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPDEDeformableRegistrationPython.dir/itkDemonsRegistrationFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/itkDemonsRegistrationFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationPython.dir/itkLevelSetMotionRegistrationFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkCosImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkCosImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkDivideImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkConstrainedValueAdditionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkConstrainedValueAdditionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkEdgePotentialImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkConstrainedValueDifferenceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkConstrainedValueDifferenceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkExpImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkClampImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkClampImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkExpNegativeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryOpeningByReconstructionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryOpeningByReconstructionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkBinaryPruningImageFilterPython.cpp, ../../../lib/itkBinaryPruningImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkExpImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkExpImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkHistogramMatchingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkDivideImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkDivideImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkIntensityWindowingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkEdgePotentialImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkEdgePotentialImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkInvertIntensityImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkExpNegativeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkExpNegativeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkLog10ImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkHistogramMatchingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkHistogramMatchingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkLogImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkInvertIntensityImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkInvertIntensityImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkMagnitudeAndPhaseToComplexImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkLog10ImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkLog10ImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkMaskImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryPruningImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryPruningImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkBinaryThinningImageFilterPython.cpp, ../../../lib/itkBinaryThinningImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkLogImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkLogImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkMaskNegatedImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkMagnitudeAndPhaseToComplexImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkMagnitudeAndPhaseToComplexImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkMaximumImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkBlackTopHatImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkBlackTopHatImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkClosingByReconstructionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryThinningImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBinaryThinningImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkDilateObjectMorphologyImageFilterPython.cpp, ../../../lib/itkDilateObjectMorphologyImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkMaximumImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkMaximumImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkMinimumImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkIntensityWindowingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkIntensityWindowingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkModulusImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkModulusImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkModulusImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkMultiplyImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkMinimumImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkMinimumImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkNaryAddImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFusion/itkLabelOverlayImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelOverlayImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkLabelToRGBImageFilterPython.cpp, ../../../lib/itkLabelToRGBImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkNaryAddImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkNaryAddImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkNaryMaximumImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkDilateObjectMorphologyImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDilateObjectMorphologyImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating itkErodeObjectMorphologyImageFilterPython.cpp, ../../../lib/itkErodeObjectMorphologyImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration && /usr/bin/c++ -DITKPDEDeformableRegistrationPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/PDEDeformable/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPDEDeformableRegistrationPython.dir/itkLevelSetMotionRegistrationFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/itkLevelSetMotionRegistrationFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationPython.dir/itkPDEDeformableRegistrationFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkMultiplyImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkMultiplyImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkNormalizeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkNaryMaximumImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkNaryMaximumImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkNormalizeToConstantImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkClosingByReconstructionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkClosingByReconstructionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkDoubleThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkNormalizeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkNormalizeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkNotImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkNormalizeToConstantImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkNormalizeToConstantImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkOrImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkNotImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkNotImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkPowImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkOrImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkOrImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkRGBToLuminanceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkErodeObjectMorphologyImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkErodeObjectMorphologyImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating ITKBinaryMathematicalMorphologyPython.cpp, ../../../lib/ITKBinaryMathematicalMorphologyPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/ITKBinaryMathematicalMorphologyPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKBinaryMathematicalMorphology.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKBinaryMathematicalMorphologyPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/build.make Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/ITKBinaryMathematicalMorphologyPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/c++ -DITKBinaryMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/ITKBinaryMathematicalMorphologyPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/ITKBinaryMathematicalMorphologyPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryClosingByReconstructionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkRGBToLuminanceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkRGBToLuminanceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkRescaleIntensityImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkPowImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkPowImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkRoundImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkRoundImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkRoundImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkShiftScaleImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkDoubleThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkDoubleThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleConnectedClosingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkShiftScaleImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkShiftScaleImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleConnectedOpeningImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkMaskImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkMaskImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkSigmoidImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/c++ -DITKBinaryMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryClosingByReconstructionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryClosingByReconstructionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryDilateImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkMaskNegatedImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkMaskNegatedImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkSinImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkSigmoidImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkSigmoidImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkSqrtImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkSinImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkSinImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkSquareImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration && /usr/bin/c++ -DITKPDEDeformableRegistrationPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/PDEDeformable/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPDEDeformableRegistrationPython.dir/itkPDEDeformableRegistrationFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/itkPDEDeformableRegistrationFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKPDEDeformableRegistration/CMakeFiles/ITKPDEDeformableRegistrationPython.dir/itkSymmetricForcesDemonsRegistrationFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkRescaleIntensityImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkRescaleIntensityImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkSubtractImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleConnectedClosingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleConnectedClosingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleDilateImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleConnectedOpeningImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleConnectedOpeningImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleErodeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkSqrtImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkSqrtImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkTanImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkSquareImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkSquareImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkTernaryAddImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/c++ -DITKBinaryMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryDilateImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryDilateImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryErodeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkTanImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkTanImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkTernaryMagnitudeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkSubtractImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkSubtractImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkTernaryMagnitudeSquaredImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkTernaryAddImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkTernaryAddImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkVectorExpandImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFusion/itkLabelToRGBImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelToRGBImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Generating ITKImageFusionPython.cpp, ../../../lib/ITKImageFusionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKImageFusion/ITKImageFusionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKImageFusion.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/ImageFusion/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKImageFusion /<>/BUILD/Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKImageFusionPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionPython.dir/build.make Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionPython.dir/ITKImageFusionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/c++ -DITKImageFusionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFusion/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFusionPython.dir/ITKImageFusionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFusion/ITKImageFusionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionPython.dir/itkLabelMapContourOverlayImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkTernaryMagnitudeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkTernaryMagnitudeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 95%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkVectorIndexSelectionCastImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkTernaryMagnitudeSquaredImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkTernaryMagnitudeSquaredImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkVectorMagnitudeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkVectorExpandImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkVectorExpandImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkVectorRescaleIntensityImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/c++ -DITKBinaryMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryErodeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryErodeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryMorphologicalClosingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleErodeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleErodeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleFillholeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleDilateImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleDilateImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleFunctionDilateImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/c++ -DITKImageFusionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFusion/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFusionPython.dir/itkLabelMapContourOverlayImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFusion/itkLabelMapContourOverlayImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionPython.dir/itkLabelMapOverlayImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkVectorRescaleIntensityImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkVectorRescaleIntensityImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkWeightedAddImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/c++ -DITKImageFusionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFusion/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFusionPython.dir/itkLabelMapOverlayImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFusion/itkLabelMapOverlayImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionPython.dir/itkLabelMapToRGBImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleFunctionDilateImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleFunctionDilateImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleFunctionErodeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/c++ -DITKImageFusionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFusion/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFusionPython.dir/itkLabelMapToRGBImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFusion/itkLabelMapToRGBImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionPython.dir/itkLabelOverlayImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkVectorIndexSelectionCastImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkVectorIndexSelectionCastImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKImageIntensity/CMakeFiles/ITKImageIntensityPython.dir/itkXorImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkWeightedAddImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkWeightedAddImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKImageFusion/CMakeFiles/ITKImageFusionPython.dir/itkLabelToRGBImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkVectorMagnitudeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkVectorMagnitudeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleGeodesicDilateImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/c++ -DITKImageFusionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFusion/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFusionPython.dir/itkLabelOverlayImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFusion/itkLabelOverlayImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleGeodesicErodeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleFillholeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleFillholeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleGrindPeakImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/c++ -DITKImageIntensityPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageIntensity/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageIntensityPython.dir/itkXorImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageIntensity/itkXorImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Linking CXX shared module ../../../lib/_ITKImageIntensityPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleFunctionErodeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleFunctionErodeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleMorphologicalClosingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration && /usr/bin/c++ -DITKPDEDeformableRegistrationPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Registration/PDEDeformable/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKPDEDeformableRegistrationPython.dir/itkSymmetricForcesDemonsRegistrationFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration/itkSymmetricForcesDemonsRegistrationFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Linking CXX shared module ../../../lib/_ITKPDEDeformableRegistrationPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/c++ -DITKImageFusionPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/ImageFusion/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKImageFusionPython.dir/itkLabelToRGBImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKImageFusion/itkLabelToRGBImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 96%] Linking CXX shared module ../../../lib/_ITKImageFusionPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageIntensity && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageIntensityPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageIntensityPython.so CMakeFiles/ITKImageIntensityPython.dir/ITKImageIntensityPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkAbsImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkAcosImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkAddImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkAndImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkAsinImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkAtan2ImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkAtanImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkBinaryMagnitudeImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkBoundedReciprocalImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkClampImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkComplexToImaginaryImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkComplexToModulusImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkComplexToPhaseImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkComplexToRealImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkConstrainedValueAdditionImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkConstrainedValueDifferenceImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkCosImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkDivideImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkEdgePotentialImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkExpImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkExpNegativeImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkHistogramMatchingImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkIntensityWindowingImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkInvertIntensityImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkLog10ImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkLogImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkMagnitudeAndPhaseToComplexImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkMaskImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkMaskNegatedImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkMaximumImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkMinimumImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkModulusImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkMultiplyImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkNaryAddImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkNaryMaximumImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkNormalizeImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkNormalizeToConstantImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkNotImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkOrImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkPowImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkRGBToLuminanceImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkRescaleIntensityImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkRoundImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkShiftScaleImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkSigmoidImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkSinImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkSqrtImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkSquareImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkSubtractImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkTanImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkTernaryAddImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkTernaryMagnitudeImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkTernaryMagnitudeSquaredImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkVectorExpandImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkVectorIndexSelectionCastImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkVectorMagnitudeImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkVectorRescaleIntensityImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkWeightedAddImageFilterPython.cpp.o CMakeFiles/ITKImageIntensityPython.dir/itkXorImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 97%] Built target ITKImageIntensityPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/build.make Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 97%] Generating itkApproximateSignedDistanceMapImageFilterPython.cpp, ../../../lib/itkApproximateSignedDistanceMapImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKImageFusion && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKImageFusionPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKImageFusionPython.so CMakeFiles/ITKImageFusionPython.dir/ITKImageFusionPython.cpp.o CMakeFiles/ITKImageFusionPython.dir/itkLabelMapContourOverlayImageFilterPython.cpp.o CMakeFiles/ITKImageFusionPython.dir/itkLabelMapOverlayImageFilterPython.cpp.o CMakeFiles/ITKImageFusionPython.dir/itkLabelMapToRGBImageFilterPython.cpp.o CMakeFiles/ITKImageFusionPython.dir/itkLabelOverlayImageFilterPython.cpp.o CMakeFiles/ITKImageFusionPython.dir/itkLabelToRGBImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 97%] Built target ITKImageFusionPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsSwig.dir/build.make Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LevelSets/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKLevelSets /<>/BUILD/Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLevelSetsSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsSwig.dir/build.make Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 97%] Generating ../../Typedefs/itkLevelSetFunction.i, ../../Typedefs/itkSparseFieldLevelSetImageFilter.i, ../../Typedefs/itkSparseFieldFourthOrderLevelSetImageFilter.i, ../../Typedefs/itkSegmentationLevelSetImageFilter.i, ../../Typedefs/itkShapePriorSegmentationLevelSetImageFilter.i, ../../Typedefs/itkAnisotropicFourthOrderLevelSetImageFilter.i, ../../Typedefs/itkCannySegmentationLevelSetImageFilter.i, ../../Typedefs/itkCollidingFrontsImageFilter.i, ../../Typedefs/itkCurvesLevelSetImageFilter.i, ../../Typedefs/itkGeodesicActiveContourLevelSetImageFilter.i, ../../Typedefs/itkGeodesicActiveContourShapePriorLevelSetImageFilter.i, ../../Typedefs/itkIsotropicFourthOrderLevelSetImageFilter.i, ../../Typedefs/itkLaplacianSegmentationLevelSetImageFilter.i, ../../Typedefs/itkNarrowBandCurvesLevelSetImageFilter.i, ../../Typedefs/itkNarrowBandLevelSetImageFilter.i, ../../Typedefs/itkNarrowBandThresholdSegmentationLevelSetImageFilter.i, ../../Typedefs/itkParallelSparseFieldLevelSetImageFilter.i, ../../Typedefs/itkReinitializeLevelSetImageFilter.i, ../../Typedefs/itkSegmentationLevelSetFunction.i, ../../Typedefs/itkShapeDetectionLevelSetImageFilter.i, ../../Typedefs/itkShapePriorMAPCostFunction.i, ../../Typedefs/itkShapePriorMAPCostFunctionBase.i, ../../Typedefs/itkThresholdSegmentationLevelSetImageFilter.i, ../../Typedefs/itkUnsharpMaskLevelSetImageFilter.i, ../../Typedefs/itkVectorThresholdSegmentationLevelSetImageFilter.i, ../../Typedefs/itkLevelSetFunctionSwigInterface.h, ../../Typedefs/itkSparseFieldLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkSparseFieldFourthOrderLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkSegmentationLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkShapePriorSegmentationLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkAnisotropicFourthOrderLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkCannySegmentationLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkCollidingFrontsImageFilterSwigInterface.h, ../../Typedefs/itkCurvesLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkGeodesicActiveContourLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkGeodesicActiveContourShapePriorLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkIsotropicFourthOrderLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkLaplacianSegmentationLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkNarrowBandCurvesLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkNarrowBandLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkNarrowBandThresholdSegmentationLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkParallelSparseFieldLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkReinitializeLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkSegmentationLevelSetFunctionSwigInterface.h, ../../Typedefs/itkShapeDetectionLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkShapePriorMAPCostFunctionSwigInterface.h, ../../Typedefs/itkShapePriorMAPCostFunctionBaseSwigInterface.h, ../../Typedefs/itkThresholdSegmentationLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkUnsharpMaskLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkVectorThresholdSegmentationLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkLevelSetFunction.idx, ../../Typedefs/itkSparseFieldLevelSetImageFilter.idx, ../../Typedefs/itkSparseFieldFourthOrderLevelSetImageFilter.idx, ../../Typedefs/itkSegmentationLevelSetImageFilter.idx, ../../Typedefs/itkShapePriorSegmentationLevelSetImageFilter.idx, ../../Typedefs/itkAnisotropicFourthOrderLevelSetImageFilter.idx, ../../Typedefs/itkCannySegmentationLevelSetImageFilter.idx, ../../Typedefs/itkCollidingFrontsImageFilter.idx, ../../Typedefs/itkCurvesLevelSetImageFilter.idx, ../../Typedefs/itkGeodesicActiveContourLevelSetImageFilter.idx, ../../Typedefs/itkGeodesicActiveContourShapePriorLevelSetImageFilter.idx, ../../Typedefs/itkIsotropicFourthOrderLevelSetImageFilter.idx, ../../Typedefs/itkLaplacianSegmentationLevelSetImageFilter.idx, ../../Typedefs/itkNarrowBandCurvesLevelSetImageFilter.idx, ../../Typedefs/itkNarrowBandLevelSetImageFilter.idx, ../../Typedefs/itkNarrowBandThresholdSegmentationLevelSetImageFilter.idx, ../../Typedefs/itkParallelSparseFieldLevelSetImageFilter.idx, ../../Typedefs/itkReinitializeLevelSetImageFilter.idx, ../../Typedefs/itkSegmentationLevelSetFunction.idx, ../../Typedefs/itkShapeDetectionLevelSetImageFilter.idx, ../../Typedefs/itkShapePriorMAPCostFunction.idx, ../../Typedefs/itkShapePriorMAPCostFunctionBase.idx, ../../Typedefs/itkThresholdSegmentationLevelSetImageFilter.idx, ../../Typedefs/itkUnsharpMaskLevelSetImageFilter.idx, ../../Typedefs/itkVectorThresholdSegmentationLevelSetImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/c++ -DITKBinaryMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryMorphologicalClosingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryMorphologicalClosingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryMorphologicalOpeningImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKPDEDeformableRegistration && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKPDEDeformableRegistrationPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKPDEDeformableRegistrationPython.so CMakeFiles/ITKPDEDeformableRegistrationPython.dir/ITKPDEDeformableRegistrationPython.cpp.o CMakeFiles/ITKPDEDeformableRegistrationPython.dir/itkDemonsRegistrationFilterPython.cpp.o CMakeFiles/ITKPDEDeformableRegistrationPython.dir/itkLevelSetMotionRegistrationFilterPython.cpp.o CMakeFiles/ITKPDEDeformableRegistrationPython.dir/itkPDEDeformableRegistrationFilterPython.cpp.o CMakeFiles/ITKPDEDeformableRegistrationPython.dir/itkSymmetricForcesDemonsRegistrationFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 97%] Built target ITKPDEDeformableRegistrationPython make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryOpeningByReconstructionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleGeodesicErodeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleGeodesicErodeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleMorphologicalOpeningImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleGeodesicDilateImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleGeodesicDilateImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkHConcaveImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkApproximateSignedDistanceMapImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkApproximateSignedDistanceMapImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Generating itkContourDirectedMeanDistanceImageFilterPython.cpp, ../../../lib/itkContourDirectedMeanDistanceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleGrindPeakImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleGrindPeakImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkHConvexImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/c++ -DITKBinaryMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryOpeningByReconstructionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryOpeningByReconstructionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryPruningImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/c++ -DITKBinaryMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryPruningImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryPruningImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryThinningImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/c++ -DITKBinaryMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryMorphologicalOpeningImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryMorphologicalOpeningImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkDilateObjectMorphologyImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/c++ -DITKBinaryMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryThinningImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkBinaryThinningImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKBinaryMathematicalMorphology/CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkErodeObjectMorphologyImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKLevelSets.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKAnisotropicSmoothing.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKDistanceMap.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKFastMarching.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKFiniteDifference.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageCompare.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFeature.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKNarrowBand.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKOptimizers.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKThresholding.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkLevelSetFunction;itkSparseFieldLevelSetImageFilter;itkSparseFieldFourthOrderLevelSetImageFilter;itkSegmentationLevelSetImageFilter;itkShapePriorSegmentationLevelSetImageFilter;itkAnisotropicFourthOrderLevelSetImageFilter;itkCannySegmentationLevelSetImageFilter;itkCollidingFrontsImageFilter;itkCurvesLevelSetImageFilter;itkGeodesicActiveContourLevelSetImageFilter;itkGeodesicActiveContourShapePriorLevelSetImageFilter;itkIsotropicFourthOrderLevelSetImageFilter;itkLaplacianSegmentationLevelSetImageFilter;itkNarrowBandCurvesLevelSetImageFilter;itkNarrowBandLevelSetImageFilter;itkNarrowBandThresholdSegmentationLevelSetImageFilter;itkParallelSparseFieldLevelSetImageFilter;itkReinitializeLevelSetImageFilter;itkSegmentationLevelSetFunction;itkShapeDetectionLevelSetImageFilter;itkShapePriorMAPCostFunction;itkShapePriorMAPCostFunctionBase;itkThresholdSegmentationLevelSetImageFilter;itkUnsharpMaskLevelSetImageFilter;itkVectorThresholdSegmentationLevelSetImageFilter" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 97%] Built target ITKLevelSetsSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/build.make Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 97%] Generating itkLevelSetFunctionPython.cpp, ../../../lib/itkLevelSetFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkLevelSetFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLevelSetFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Generating itkSparseFieldLevelSetImageFilterPython.cpp, ../../../lib/itkSparseFieldLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleMorphologicalClosingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleMorphologicalClosingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkHMaximaImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkHConcaveImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkHConcaveImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkHMinimaImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkContourDirectedMeanDistanceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkContourDirectedMeanDistanceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Generating itkContourMeanDistanceImageFilterPython.cpp, ../../../lib/itkContourMeanDistanceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/c++ -DITKBinaryMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkErodeObjectMorphologyImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkErodeObjectMorphologyImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Generating itkDanielssonDistanceMapImageFilterPython.cpp, ../../../lib/itkDanielssonDistanceMapImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/c++ -DITKBinaryMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/BinaryMathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkDilateObjectMorphologyImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology/itkDilateObjectMorphologyImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Linking CXX shared module ../../../lib/_ITKBinaryMathematicalMorphologyPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKBinaryMathematicalMorphology && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKBinaryMathematicalMorphologyPython.so CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/ITKBinaryMathematicalMorphologyPython.cpp.o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryClosingByReconstructionImageFilterPython.cpp.o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryDilateImageFilterPython.cpp.o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryErodeImageFilterPython.cpp.o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryMorphologicalClosingImageFilterPython.cpp.o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryMorphologicalOpeningImageFilterPython.cpp.o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryOpeningByReconstructionImageFilterPython.cpp.o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryPruningImageFilterPython.cpp.o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkBinaryThinningImageFilterPython.cpp.o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkDilateObjectMorphologyImageFilterPython.cpp.o CMakeFiles/ITKBinaryMathematicalMorphologyPython.dir/itkErodeObjectMorphologyImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 97%] Built target ITKBinaryMathematicalMorphologyPython make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasSwig.dir/build.make Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/AntiAlias/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKAntiAlias /<>/BUILD/Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAntiAliasSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasSwig.dir/build.make Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 97%] Generating ../../Typedefs/itkAntiAliasBinaryImageFilter.i, ../../Typedefs/itkAntiAliasBinaryImageFilterSwigInterface.h, ../../Typedefs/itkAntiAliasBinaryImageFilter.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAntiAlias && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKAntiAlias.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKLevelSets.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order itkAntiAliasBinaryImageFilter make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 97%] Built target ITKAntiAliasSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasPython.dir/build.make Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 97%] Generating itkAntiAliasBinaryImageFilterPython.cpp, ../../../lib/itkAntiAliasBinaryImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkHConvexImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkHConvexImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkMorphologicalGradientImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleMorphologicalOpeningImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkGrayscaleMorphologicalOpeningImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewSwig.dir/build.make Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewSwig.dir/depend make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/Review/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKReview /<>/BUILD/Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewSwig.dir/DependInfo.cmake --color= Scanning dependencies of target ITKReviewSwig make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewSwig.dir/build.make Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewSwig.dir/build make[3]: Entering directory '/<>/BUILD' [ 97%] Generating ../../Typedefs/itkAreaClosingImageFilter.i, ../../Typedefs/itkAreaOpeningImageFilter.i, ../../Typedefs/itkBoxMeanImageFilter.i, ../../Typedefs/itkBoxSigmaImageFilter.i, ../../Typedefs/itkBruker2DSEQImageIO.i, ../../Typedefs/itkContourExtractor2DImageFilter.i, ../../Typedefs/itkDiffeomorphicDemonsRegistrationFilter.i, ../../Typedefs/itkDirectFourierReconstructionImageToImageFilter.i, ../../Typedefs/itkDiscreteGaussianDerivativeImageFilter.i, ../../Typedefs/itkESMDemonsRegistrationFunction.i, ../../Typedefs/itkFastApproximateRankImageFilter.i, ../../Typedefs/itkFastSymmetricForcesDemonsRegistrationFilter.i, ../../Typedefs/itkGridForwardWarpImageFilter.i, ../../Typedefs/itkJPEG2000ImageIO.i, ../../Typedefs/itkLabelGeometryImageFilter.i, ../../Typedefs/itkMaskedRankImageFilter.i, ../../Typedefs/itkMultiScaleHessianBasedMeasureImageFilter.i, ../../Typedefs/itkRankImageFilter.i, ../../Typedefs/itkRobustAutomaticThresholdImageFilter.i, ../../Typedefs/itkScalarChanAndVeseDenseLevelSetImageFilter.i, ../../Typedefs/itkScalarChanAndVeseLevelSetFunction.i, ../../Typedefs/itkScalarChanAndVeseSparseLevelSetImageFilter.i, ../../Typedefs/itkStochasticFractalDimensionImageFilter.i, ../../Typedefs/itkVoxBoCUBImageIO.i, ../../Typedefs/itkAreaClosingImageFilterSwigInterface.h, ../../Typedefs/itkAreaOpeningImageFilterSwigInterface.h, ../../Typedefs/itkBoxMeanImageFilterSwigInterface.h, ../../Typedefs/itkBoxSigmaImageFilterSwigInterface.h, ../../Typedefs/itkBruker2DSEQImageIOSwigInterface.h, ../../Typedefs/itkContourExtractor2DImageFilterSwigInterface.h, ../../Typedefs/itkDiffeomorphicDemonsRegistrationFilterSwigInterface.h, ../../Typedefs/itkDirectFourierReconstructionImageToImageFilterSwigInterface.h, ../../Typedefs/itkDiscreteGaussianDerivativeImageFilterSwigInterface.h, ../../Typedefs/itkESMDemonsRegistrationFunctionSwigInterface.h, ../../Typedefs/itkFastApproximateRankImageFilterSwigInterface.h, ../../Typedefs/itkFastSymmetricForcesDemonsRegistrationFilterSwigInterface.h, ../../Typedefs/itkGridForwardWarpImageFilterSwigInterface.h, ../../Typedefs/itkJPEG2000ImageIOSwigInterface.h, ../../Typedefs/itkLabelGeometryImageFilterSwigInterface.h, ../../Typedefs/itkMaskedRankImageFilterSwigInterface.h, ../../Typedefs/itkMultiScaleHessianBasedMeasureImageFilterSwigInterface.h, ../../Typedefs/itkRankImageFilterSwigInterface.h, ../../Typedefs/itkRobustAutomaticThresholdImageFilterSwigInterface.h, ../../Typedefs/itkScalarChanAndVeseDenseLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkScalarChanAndVeseLevelSetFunctionSwigInterface.h, ../../Typedefs/itkScalarChanAndVeseSparseLevelSetImageFilterSwigInterface.h, ../../Typedefs/itkStochasticFractalDimensionImageFilterSwigInterface.h, ../../Typedefs/itkVoxBoCUBImageIOSwigInterface.h, ../../Typedefs/itkAreaClosingImageFilter.idx, ../../Typedefs/itkAreaOpeningImageFilter.idx, ../../Typedefs/itkBoxMeanImageFilter.idx, ../../Typedefs/itkBoxSigmaImageFilter.idx, ../../Typedefs/itkBruker2DSEQImageIO.idx, ../../Typedefs/itkContourExtractor2DImageFilter.idx, ../../Typedefs/itkDiffeomorphicDemonsRegistrationFilter.idx, ../../Typedefs/itkDirectFourierReconstructionImageToImageFilter.idx, ../../Typedefs/itkDiscreteGaussianDerivativeImageFilter.idx, ../../Typedefs/itkESMDemonsRegistrationFunction.idx, ../../Typedefs/itkFastApproximateRankImageFilter.idx, ../../Typedefs/itkFastSymmetricForcesDemonsRegistrationFilter.idx, ../../Typedefs/itkGridForwardWarpImageFilter.idx, ../../Typedefs/itkJPEG2000ImageIO.idx, ../../Typedefs/itkLabelGeometryImageFilter.idx, ../../Typedefs/itkMaskedRankImageFilter.idx, ../../Typedefs/itkMultiScaleHessianBasedMeasureImageFilter.idx, ../../Typedefs/itkRankImageFilter.idx, ../../Typedefs/itkRobustAutomaticThresholdImageFilter.idx, ../../Typedefs/itkScalarChanAndVeseDenseLevelSetImageFilter.idx, ../../Typedefs/itkScalarChanAndVeseLevelSetFunction.idx, ../../Typedefs/itkScalarChanAndVeseSparseLevelSetImageFilter.idx, ../../Typedefs/itkStochasticFractalDimensionImageFilter.idx, ../../Typedefs/itkVoxBoCUBImageIO.idx make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkContourMeanDistanceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkContourMeanDistanceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Generating itkDirectedHausdorffDistanceImageFilterPython.cpp, ../../../lib/itkDirectedHausdorffDistanceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkHMaximaImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkHMaximaImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 97%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkOpeningByReconstructionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkHMinimaImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkHMinimaImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkReconstructionByDilationImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkDanielssonDistanceMapImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDanielssonDistanceMapImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkFastChamferDistanceImageFilterPython.cpp, ../../../lib/itkFastChamferDistanceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkDirectedHausdorffDistanceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDirectedHausdorffDistanceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkHausdorffDistanceImageFilterPython.cpp, ../../../lib/itkHausdorffDistanceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/python2.7 /<>/Wrapping/Generators/SwigInterface/igenerator.py --mdx /<>/BUILD/Wrapping/Typedefs/ITKReview.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKAnisotropicSmoothing.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKAntiAlias.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKBiasCorrection.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKBinaryMathematicalMorphology.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKClassifiers.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKConnectedComponents.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKCurvatureFlow.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKDisplacementField.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKDistanceMap.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKEigen.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKFFT.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKFiniteDifference.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOBMP.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOBioRad.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOGDCM.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOGE.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOGIPL.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOIPL.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOImageBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOJPEG.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOMeta.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIONIFTI.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIONRRD.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOPNG.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIORAW.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOSiemens.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOSpatialObjects.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOStimulate.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOTIFF.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOTransformBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKIOVTK.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageCompare.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageCompose.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFeature.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFilterBase.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFunction.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageFusion.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGradient.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageGrid.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageIntensity.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageLabel.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKImageStatistics.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKLabelMap.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKLabelVoting.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKLevelSets.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKMathematicalMorphology.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKMesh.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKNarrowBand.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKOptimizers.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKPDEDeformableRegistration.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKPath.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKQuadEdgeMesh.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKQuadEdgeMeshFiltering.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKRegionGrowing.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKRegistrationCommon.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKSmoothing.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKSpatialObjects.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKStatistics.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKThresholding.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKVTK.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKVoronoi.mdx --mdx /<>/BUILD/Wrapping/Typedefs/ITKWatersheds.mdx -w1 -w3 -w51 -w52 -w53 -w54 -A protected -A private -p /<>/CMake/../Modules/ThirdParty/pygccxml/src -g /usr/bin/castxml --interface-output-dir /<>/BUILD/Wrapping/Typedefs --library-output-dir /<>/BUILD/Wrapping --submodule-order "itkAreaClosingImageFilter;itkAreaOpeningImageFilter;itkBoxMeanImageFilter;itkBoxSigmaImageFilter;itkBruker2DSEQImageIO;itkContourExtractor2DImageFilter;itkDiffeomorphicDemonsRegistrationFilter;itkDirectFourierReconstructionImageToImageFilter;itkDiscreteGaussianDerivativeImageFilter;itkESMDemonsRegistrationFunction;itkFastApproximateRankImageFilter;itkFastSymmetricForcesDemonsRegistrationFilter;itkGridForwardWarpImageFilter;itkJPEG2000ImageIO;itkLabelGeometryImageFilter;itkMaskedRankImageFilter;itkMultiScaleHessianBasedMeasureImageFilter;itkRankImageFilter;itkRobustAutomaticThresholdImageFilter;itkScalarChanAndVeseDenseLevelSetImageFilter;itkScalarChanAndVeseLevelSetFunction;itkScalarChanAndVeseSparseLevelSetImageFilter;itkStochasticFractalDimensionImageFilter;itkVoxBoCUBImageIO" make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 98%] Built target ITKReviewSwig make[2]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/build.make Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/depend make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkAreaClosingImageFilterPython.cpp, ../../../lib/itkAreaClosingImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkMorphologicalGradientImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkMorphologicalGradientImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkReconstructionByErosionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkReconstructionByDilationImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkReconstructionByDilationImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkRegionalMaximaImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkFastChamferDistanceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFastChamferDistanceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkIsoContourDistanceImageFilterPython.cpp, ../../../lib/itkIsoContourDistanceImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkHausdorffDistanceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkHausdorffDistanceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkSignedDanielssonDistanceMapImageFilterPython.cpp, ../../../lib/itkSignedDanielssonDistanceMapImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkOpeningByReconstructionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkOpeningByReconstructionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkRegionalMinimaImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkAreaClosingImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAreaClosingImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkAreaOpeningImageFilterPython.cpp, ../../../lib/itkAreaOpeningImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkRegionalMaximaImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkRegionalMaximaImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkValuedRegionalMaximaImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkReconstructionByErosionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkReconstructionByErosionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkValuedRegionalMinimaImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkIsoContourDistanceImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIsoContourDistanceImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkSignedMaurerDistanceMapImageFilterPython.cpp, ../../../lib/itkSignedMaurerDistanceMapImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkRegionalMinimaImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkRegionalMinimaImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKMathematicalMorphology/CMakeFiles/ITKMathematicalMorphologyPython.dir/itkWhiteTopHatImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkValuedRegionalMaximaImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkValuedRegionalMaximaImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkBoxMeanImageFilterPython.cpp, ../../../lib/itkBoxMeanImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkSignedDanielssonDistanceMapImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSignedDanielssonDistanceMapImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkBoxSigmaImageFilterPython.cpp, ../../../lib/itkBoxSigmaImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkValuedRegionalMinimaImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkValuedRegionalMinimaImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkBruker2DSEQImageIOPython.cpp, ../../../lib/itkBruker2DSEQImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkAreaOpeningImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAreaOpeningImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkContourExtractor2DImageFilterPython.cpp, ../../../lib/itkContourExtractor2DImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkBruker2DSEQImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBruker2DSEQImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkDiffeomorphicDemonsRegistrationFilterPython.cpp, ../../../lib/itkDiffeomorphicDemonsRegistrationFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkContourExtractor2DImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkContourExtractor2DImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkDirectFourierReconstructionImageToImageFilterPython.cpp, ../../../lib/itkDirectFourierReconstructionImageToImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkSignedMaurerDistanceMapImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSignedMaurerDistanceMapImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating ITKDistanceMapPython.cpp, ../../../lib/ITKDistanceMapPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKDistanceMap/ITKDistanceMapPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKDistanceMap.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/DistanceMap/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKDistanceMap /<>/BUILD/Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKDistanceMapPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/build.make Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/ITKDistanceMapPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/c++ -DITKDistanceMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DistanceMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDistanceMapPython.dir/ITKDistanceMapPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDistanceMap/ITKDistanceMapPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/itkApproximateSignedDistanceMapImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkBoxMeanImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBoxMeanImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkDiscreteGaussianDerivativeImageFilterPython.cpp, ../../../lib/itkDiscreteGaussianDerivativeImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkBoxSigmaImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkBoxSigmaImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkESMDemonsRegistrationFunctionPython.cpp, ../../../lib/itkESMDemonsRegistrationFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkSparseFieldLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSparseFieldLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkSparseFieldFourthOrderLevelSetImageFilterPython.cpp, ../../../lib/itkSparseFieldFourthOrderLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/c++ -DITKDistanceMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DistanceMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDistanceMapPython.dir/itkApproximateSignedDistanceMapImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkApproximateSignedDistanceMapImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/itkContourDirectedMeanDistanceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkDirectFourierReconstructionImageToImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDirectFourierReconstructionImageToImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkFastApproximateRankImageFilterPython.cpp, ../../../lib/itkFastApproximateRankImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKAntiAlias/itkAntiAliasBinaryImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAntiAliasBinaryImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating ITKAntiAliasPython.cpp, ../../../lib/ITKAntiAliasPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKAntiAlias/ITKAntiAliasPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKAntiAlias.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Filtering/AntiAlias/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKAntiAlias /<>/BUILD/Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKAntiAliasPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasPython.dir/build.make Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasPython.dir/ITKAntiAliasPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAntiAlias && /usr/bin/c++ -DITKAntiAliasPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/AntiAlias/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKAntiAliasPython.dir/ITKAntiAliasPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKAntiAlias/ITKAntiAliasPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKAntiAlias/CMakeFiles/ITKAntiAliasPython.dir/itkAntiAliasBinaryImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/c++ -DITKMathematicalMorphologyPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/MathematicalMorphology/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkWhiteTopHatImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology/itkWhiteTopHatImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Linking CXX shared module ../../../lib/_ITKMathematicalMorphologyPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkESMDemonsRegistrationFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkESMDemonsRegistrationFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkFastSymmetricForcesDemonsRegistrationFilterPython.cpp, ../../../lib/itkFastSymmetricForcesDemonsRegistrationFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkDiscreteGaussianDerivativeImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDiscreteGaussianDerivativeImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkGridForwardWarpImageFilterPython.cpp, ../../../lib/itkGridForwardWarpImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKMathematicalMorphology && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKMathematicalMorphologyPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKMathematicalMorphologyPython.so CMakeFiles/ITKMathematicalMorphologyPython.dir/ITKMathematicalMorphologyPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkFlatStructuringElementPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkBlackTopHatImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkClosingByReconstructionImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkDoubleThresholdImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleConnectedClosingImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleConnectedOpeningImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleDilateImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleErodeImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleFillholeImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleFunctionDilateImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleFunctionErodeImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleGeodesicDilateImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleGeodesicErodeImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleGrindPeakImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleMorphologicalClosingImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkGrayscaleMorphologicalOpeningImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkHConcaveImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkHConvexImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkHMaximaImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkHMinimaImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkMorphologicalGradientImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkOpeningByReconstructionImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkReconstructionByDilationImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkReconstructionByErosionImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkRegionalMaximaImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkRegionalMinimaImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkValuedRegionalMaximaImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkValuedRegionalMinimaImageFilterPython.cpp.o CMakeFiles/ITKMathematicalMorphologyPython.dir/itkWhiteTopHatImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 98%] Built target ITKMathematicalMorphologyPython make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkJPEG2000ImageIOPython.cpp, ../../../lib/itkJPEG2000ImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/c++ -DITKDistanceMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DistanceMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDistanceMapPython.dir/itkContourDirectedMeanDistanceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkContourDirectedMeanDistanceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/itkContourMeanDistanceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkJPEG2000ImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkJPEG2000ImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkLabelGeometryImageFilterPython.cpp, ../../../lib/itkLabelGeometryImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAntiAlias && /usr/bin/c++ -DITKAntiAliasPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/AntiAlias/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKAntiAliasPython.dir/itkAntiAliasBinaryImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKAntiAlias/itkAntiAliasBinaryImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Linking CXX shared module ../../../lib/_ITKAntiAliasPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKAntiAlias && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKAntiAliasPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKAntiAliasPython.so CMakeFiles/ITKAntiAliasPython.dir/ITKAntiAliasPython.cpp.o CMakeFiles/ITKAntiAliasPython.dir/itkAntiAliasBinaryImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 98%] Built target ITKAntiAliasPython make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkMaskedRankImageFilterPython.cpp, ../../../lib/itkMaskedRankImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkFastApproximateRankImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFastApproximateRankImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkMultiScaleHessianBasedMeasureImageFilterPython.cpp, ../../../lib/itkMultiScaleHessianBasedMeasureImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/c++ -DITKDistanceMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DistanceMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDistanceMapPython.dir/itkContourMeanDistanceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkContourMeanDistanceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/itkDanielssonDistanceMapImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkLabelGeometryImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLabelGeometryImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkRankImageFilterPython.cpp, ../../../lib/itkRankImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/c++ -DITKDistanceMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DistanceMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDistanceMapPython.dir/itkDanielssonDistanceMapImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkDanielssonDistanceMapImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/itkDirectedHausdorffDistanceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkMaskedRankImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMaskedRankImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkRobustAutomaticThresholdImageFilterPython.cpp, ../../../lib/itkRobustAutomaticThresholdImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkGridForwardWarpImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGridForwardWarpImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkScalarChanAndVeseDenseLevelSetImageFilterPython.cpp, ../../../lib/itkScalarChanAndVeseDenseLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/c++ -DITKDistanceMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DistanceMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDistanceMapPython.dir/itkDirectedHausdorffDistanceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkDirectedHausdorffDistanceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/itkFastChamferDistanceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkRankImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRankImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkScalarChanAndVeseLevelSetFunctionPython.cpp, ../../../lib/itkScalarChanAndVeseLevelSetFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/c++ -DITKDistanceMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DistanceMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDistanceMapPython.dir/itkFastChamferDistanceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkFastChamferDistanceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Building CXX object Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/itkHausdorffDistanceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkRobustAutomaticThresholdImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkRobustAutomaticThresholdImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 98%] Generating itkScalarChanAndVeseSparseLevelSetImageFilterPython.cpp, ../../../lib/itkScalarChanAndVeseSparseLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkScalarChanAndVeseLevelSetFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScalarChanAndVeseLevelSetFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkStochasticFractalDimensionImageFilterPython.cpp, ../../../lib/itkStochasticFractalDimensionImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/c++ -DITKDistanceMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DistanceMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDistanceMapPython.dir/itkHausdorffDistanceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkHausdorffDistanceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/itkIsoContourDistanceImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/c++ -DITKDistanceMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DistanceMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDistanceMapPython.dir/itkIsoContourDistanceImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkIsoContourDistanceImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/itkSignedDanielssonDistanceMapImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkMultiScaleHessianBasedMeasureImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkMultiScaleHessianBasedMeasureImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkVoxBoCUBImageIOPython.cpp, ../../../lib/itkVoxBoCUBImageIOPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkStochasticFractalDimensionImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkStochasticFractalDimensionImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKDistanceMap/CMakeFiles/ITKDistanceMapPython.dir/itkSignedMaurerDistanceMapImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkVoxBoCUBImageIOPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVoxBoCUBImageIO.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkSegmentationLevelSetImageFilterPython.cpp, ../../../lib/itkSegmentationLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkSparseFieldFourthOrderLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSparseFieldFourthOrderLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkShapePriorSegmentationLevelSetImageFilterPython.cpp, ../../../lib/itkShapePriorSegmentationLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/c++ -DITKDistanceMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DistanceMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDistanceMapPython.dir/itkSignedMaurerDistanceMapImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkSignedMaurerDistanceMapImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkAnisotropicFourthOrderLevelSetImageFilterPython.cpp, ../../../lib/itkAnisotropicFourthOrderLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/c++ -DITKDistanceMapPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Filtering/DistanceMap/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKDistanceMapPython.dir/itkSignedDanielssonDistanceMapImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKDistanceMap/itkSignedDanielssonDistanceMapImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Linking CXX shared module ../../../lib/_ITKDistanceMapPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKDistanceMap && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKDistanceMapPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKDistanceMapPython.so CMakeFiles/ITKDistanceMapPython.dir/ITKDistanceMapPython.cpp.o CMakeFiles/ITKDistanceMapPython.dir/itkApproximateSignedDistanceMapImageFilterPython.cpp.o CMakeFiles/ITKDistanceMapPython.dir/itkContourDirectedMeanDistanceImageFilterPython.cpp.o CMakeFiles/ITKDistanceMapPython.dir/itkContourMeanDistanceImageFilterPython.cpp.o CMakeFiles/ITKDistanceMapPython.dir/itkDanielssonDistanceMapImageFilterPython.cpp.o CMakeFiles/ITKDistanceMapPython.dir/itkDirectedHausdorffDistanceImageFilterPython.cpp.o CMakeFiles/ITKDistanceMapPython.dir/itkFastChamferDistanceImageFilterPython.cpp.o CMakeFiles/ITKDistanceMapPython.dir/itkHausdorffDistanceImageFilterPython.cpp.o CMakeFiles/ITKDistanceMapPython.dir/itkIsoContourDistanceImageFilterPython.cpp.o CMakeFiles/ITKDistanceMapPython.dir/itkSignedDanielssonDistanceMapImageFilterPython.cpp.o CMakeFiles/ITKDistanceMapPython.dir/itkSignedMaurerDistanceMapImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [ 99%] Built target ITKDistanceMapPython make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkCannySegmentationLevelSetImageFilterPython.cpp, ../../../lib/itkCannySegmentationLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkDiffeomorphicDemonsRegistrationFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkDiffeomorphicDemonsRegistrationFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkCollidingFrontsImageFilterPython.cpp, ../../../lib/itkCollidingFrontsImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkCollidingFrontsImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCollidingFrontsImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkCurvesLevelSetImageFilterPython.cpp, ../../../lib/itkCurvesLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkScalarChanAndVeseDenseLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScalarChanAndVeseDenseLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkGeodesicActiveContourLevelSetImageFilterPython.cpp, ../../../lib/itkGeodesicActiveContourLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkScalarChanAndVeseSparseLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkScalarChanAndVeseSparseLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkGeodesicActiveContourShapePriorLevelSetImageFilterPython.cpp, ../../../lib/itkGeodesicActiveContourShapePriorLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/itkFastSymmetricForcesDemonsRegistrationFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkFastSymmetricForcesDemonsRegistrationFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating ITKReviewPython.cpp, ../../../lib/ITKReviewPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKReview/ITKReviewPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKReview.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Nonunit/Review/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKReview /<>/BUILD/Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKReviewPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/build.make Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/build make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/ITKReviewPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/ITKReviewPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/ITKReviewPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkAreaClosingImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkSegmentationLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSegmentationLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkIsotropicFourthOrderLevelSetImageFilterPython.cpp, ../../../lib/itkIsotropicFourthOrderLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkAreaClosingImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkAreaClosingImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkAreaOpeningImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkShapePriorSegmentationLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShapePriorSegmentationLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkLaplacianSegmentationLevelSetImageFilterPython.cpp, ../../../lib/itkLaplacianSegmentationLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkAnisotropicFourthOrderLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkAnisotropicFourthOrderLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkNarrowBandCurvesLevelSetImageFilterPython.cpp, ../../../lib/itkNarrowBandCurvesLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkAreaOpeningImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkAreaOpeningImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkBoxMeanImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkCannySegmentationLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCannySegmentationLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkNarrowBandLevelSetImageFilterPython.cpp, ../../../lib/itkNarrowBandLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkBoxMeanImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkBoxMeanImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkBoxSigmaImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkBoxSigmaImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkBoxSigmaImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkBruker2DSEQImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkBruker2DSEQImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkBruker2DSEQImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkContourExtractor2DImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkContourExtractor2DImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkContourExtractor2DImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkDiffeomorphicDemonsRegistrationFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkCurvesLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkCurvesLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkNarrowBandThresholdSegmentationLevelSetImageFilterPython.cpp, ../../../lib/itkNarrowBandThresholdSegmentationLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkGeodesicActiveContourLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGeodesicActiveContourLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkParallelSparseFieldLevelSetImageFilterPython.cpp, ../../../lib/itkParallelSparseFieldLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkDiffeomorphicDemonsRegistrationFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkDiffeomorphicDemonsRegistrationFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkDirectFourierReconstructionImageToImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkDirectFourierReconstructionImageToImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkDirectFourierReconstructionImageToImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkDiscreteGaussianDerivativeImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkGeodesicActiveContourShapePriorLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkGeodesicActiveContourShapePriorLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkReinitializeLevelSetImageFilterPython.cpp, ../../../lib/itkReinitializeLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkIsotropicFourthOrderLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkIsotropicFourthOrderLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkSegmentationLevelSetFunctionPython.cpp, ../../../lib/itkSegmentationLevelSetFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkDiscreteGaussianDerivativeImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkDiscreteGaussianDerivativeImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkESMDemonsRegistrationFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkSegmentationLevelSetFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkSegmentationLevelSetFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkShapeDetectionLevelSetImageFilterPython.cpp, ../../../lib/itkShapeDetectionLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkNarrowBandCurvesLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNarrowBandCurvesLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkShapePriorMAPCostFunctionPython.cpp, ../../../lib/itkShapePriorMAPCostFunctionPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkLaplacianSegmentationLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkLaplacianSegmentationLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkShapePriorMAPCostFunctionBasePython.cpp, ../../../lib/itkShapePriorMAPCostFunctionBasePython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkReinitializeLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkReinitializeLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [ 99%] Generating itkThresholdSegmentationLevelSetImageFilterPython.cpp, ../../../lib/itkThresholdSegmentationLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkNarrowBandLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNarrowBandLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Generating itkUnsharpMaskLevelSetImageFilterPython.cpp, ../../../lib/itkUnsharpMaskLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkShapePriorMAPCostFunctionPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShapePriorMAPCostFunction.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Generating itkVectorThresholdSegmentationLevelSetImageFilterPython.cpp, ../../../lib/itkVectorThresholdSegmentationLevelSetImageFilterPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkShapePriorMAPCostFunctionBasePython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShapePriorMAPCostFunctionBase.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkFastApproximateRankImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkFastApproximateRankImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkFastApproximateRankImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkFastSymmetricForcesDemonsRegistrationFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkESMDemonsRegistrationFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkESMDemonsRegistrationFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkGridForwardWarpImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkGridForwardWarpImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkGridForwardWarpImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkJPEG2000ImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkNarrowBandThresholdSegmentationLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkNarrowBandThresholdSegmentationLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkLabelGeometryImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkJPEG2000ImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkJPEG2000ImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkMaskedRankImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkParallelSparseFieldLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkParallelSparseFieldLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkMultiScaleHessianBasedMeasureImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkMultiScaleHessianBasedMeasureImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkMultiScaleHessianBasedMeasureImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkRankImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkMaskedRankImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkMaskedRankImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkRobustAutomaticThresholdImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkRankImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkRankImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkScalarChanAndVeseDenseLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkShapeDetectionLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkShapeDetectionLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkScalarChanAndVeseLevelSetFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkRobustAutomaticThresholdImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkRobustAutomaticThresholdImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkScalarChanAndVeseSparseLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkLabelGeometryImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkLabelGeometryImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkStochasticFractalDimensionImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkScalarChanAndVeseLevelSetFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkScalarChanAndVeseLevelSetFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKReview/CMakeFiles/ITKReviewPython.dir/itkVoxBoCUBImageIOPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkVoxBoCUBImageIOPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkVoxBoCUBImageIOPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkScalarChanAndVeseDenseLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkScalarChanAndVeseDenseLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkThresholdSegmentationLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkThresholdSegmentationLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkUnsharpMaskLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkUnsharpMaskLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkFastSymmetricForcesDemonsRegistrationFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkFastSymmetricForcesDemonsRegistrationFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkScalarChanAndVeseSparseLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkScalarChanAndVeseSparseLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/c++ -DITKReviewPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Nonunit/Review/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKReviewPython.dir/itkStochasticFractalDimensionImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKReview/itkStochasticFractalDimensionImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Linking CXX shared module ../../../lib/_ITKReviewPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKReview && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKReviewPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKReviewPython.so CMakeFiles/ITKReviewPython.dir/ITKReviewPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkAreaClosingImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkAreaOpeningImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkBoxMeanImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkBoxSigmaImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkBruker2DSEQImageIOPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkContourExtractor2DImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkDiffeomorphicDemonsRegistrationFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkDirectFourierReconstructionImageToImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkDiscreteGaussianDerivativeImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkESMDemonsRegistrationFunctionPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkFastApproximateRankImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkFastSymmetricForcesDemonsRegistrationFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkGridForwardWarpImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkJPEG2000ImageIOPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkLabelGeometryImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkMaskedRankImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkMultiScaleHessianBasedMeasureImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkRankImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkRobustAutomaticThresholdImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkScalarChanAndVeseDenseLevelSetImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkScalarChanAndVeseLevelSetFunctionPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkScalarChanAndVeseSparseLevelSetImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkStochasticFractalDimensionImageFilterPython.cpp.o CMakeFiles/ITKReviewPython.dir/itkVoxBoCUBImageIOPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [100%] Built target ITKReviewPython make[2]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkVectorThresholdSegmentationLevelSetImageFilterPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/itkVectorThresholdSegmentationLevelSetImageFilter.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Generating ITKLevelSetsPython.cpp, ../../../lib/ITKLevelSetsPython.py make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Typedefs/python && /usr/bin/swig3.0 -c++ -python -O -features autodoc=1 -Werror -w302 -w303 -w312 -w314 -w361 -w362 -w350 -w383 -w384 -w389 -w394 -w395 -w467 -w508 -w509 -o /<>/BUILD/Wrapping/Modules/ITKLevelSets/ITKLevelSetsPython.cpp -I/<>/Wrapping/Generators -I/<>/BUILD/Wrapping/Typedefs/python -I/<>/BUILD/Wrapping/Typedefs -outdir /<>/BUILD/lib /<>/BUILD/Wrapping/Typedefs/ITKLevelSets.i make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<>/Modules/Segmentation/LevelSets/wrapping /<>/BUILD /<>/BUILD/Wrapping/Modules/ITKLevelSets /<>/BUILD/Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/DependInfo.cmake --color= Scanning dependencies of target ITKLevelSetsPython make[3]: Leaving directory '/<>/BUILD' make -f Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/build.make Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/build make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/ITKLevelSetsPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkLevelSetFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkSparseFieldLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkSparseFieldFourthOrderLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkSegmentationLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkShapePriorSegmentationLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkAnisotropicFourthOrderLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkCannySegmentationLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/ITKLevelSetsPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/ITKLevelSetsPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkCollidingFrontsImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkShapePriorSegmentationLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkShapePriorSegmentationLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkCurvesLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkLevelSetFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkLevelSetFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkGeodesicActiveContourLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkSegmentationLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkSegmentationLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkGeodesicActiveContourShapePriorLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkCollidingFrontsImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkCollidingFrontsImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkIsotropicFourthOrderLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkSparseFieldFourthOrderLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkSparseFieldFourthOrderLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkLaplacianSegmentationLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkSparseFieldLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkSparseFieldLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkNarrowBandCurvesLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkAnisotropicFourthOrderLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkAnisotropicFourthOrderLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkNarrowBandLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkNarrowBandLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkNarrowBandLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkNarrowBandThresholdSegmentationLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkCurvesLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkCurvesLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkParallelSparseFieldLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkGeodesicActiveContourLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkGeodesicActiveContourLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkReinitializeLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkCannySegmentationLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkCannySegmentationLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkSegmentationLevelSetFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkLaplacianSegmentationLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkLaplacianSegmentationLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkShapeDetectionLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkSegmentationLevelSetFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkSegmentationLevelSetFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkShapePriorMAPCostFunctionPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkIsotropicFourthOrderLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkIsotropicFourthOrderLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkShapePriorMAPCostFunctionBasePython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkShapePriorMAPCostFunctionPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkShapePriorMAPCostFunctionPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkThresholdSegmentationLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkGeodesicActiveContourShapePriorLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkGeodesicActiveContourShapePriorLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkUnsharpMaskLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkShapePriorMAPCostFunctionBasePython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkShapePriorMAPCostFunctionBasePython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Building CXX object Wrapping/Modules/ITKLevelSets/CMakeFiles/ITKLevelSetsPython.dir/itkVectorThresholdSegmentationLevelSetImageFilterPython.cpp.o make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkNarrowBandCurvesLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkNarrowBandCurvesLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkReinitializeLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkReinitializeLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkParallelSparseFieldLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkParallelSparseFieldLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkShapeDetectionLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkShapeDetectionLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkNarrowBandThresholdSegmentationLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkNarrowBandThresholdSegmentationLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkVectorThresholdSegmentationLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkVectorThresholdSegmentationLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkThresholdSegmentationLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkThresholdSegmentationLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/c++ -DITKLevelSetsPython_EXPORTS -DITK_IO_FACTORY_REGISTER_MANAGER -I/<>/Modules/Segmentation/LevelSets/wrapping -I/<>/BUILD/Wrapping/ITKIOFactoryRegistration -I/<>/Modules/Video/Filtering/include -I/<>/Modules/Video/IO/include -I/<>/Modules/Video/Core/include -I/<>/Modules/Nonunit/Review/include -I/<>/Modules/Registration/RegistrationMethodsv4/include -I/<>/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/BUILD/Modules/ThirdParty/OpenJPEG/src/openjpeg -I/<>/Modules/Registration/Metricsv4/include -I/<>/Modules/Numerics/Optimizersv4/include -I/<>/Modules/Segmentation/LevelSetsv4/include -I/<>/Modules/Segmentation/Watersheds/include -I/<>/Modules/Segmentation/Voronoi/include -I/<>/Modules/Bridge/VTK/include -I/<>/Modules/Filtering/SpatialFunction/include -I/<>/Modules/Segmentation/RegionGrowing/include -I/<>/Modules/Filtering/QuadEdgeMeshFiltering/include -I/<>/Modules/Numerics/NeuralNetworks/include -I/<>/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/<>/Modules/Segmentation/LabelVoting/include -I/<>/Modules/Segmentation/KLMRegionGrowing/include -I/<>/Modules/Filtering/ImageNoise/include -I/<>/Modules/Filtering/ImageFusion/include -I/<>/Modules/IO/TransformMatlab/include -I/<>/Modules/IO/TransformInsightLegacy/include -I/<>/Modules/IO/TransformHDF5/include -I/<>/Modules/IO/TransformBase/include -I/<>/Modules/IO/TransformFactory/include -I/<>/Modules/IO/RAW/include -I/<>/Modules/IO/MRC/include -I/<>/Modules/IO/HDF5/include -I/<>/Modules/IO/Siemens/include -I/<>/Modules/IO/GE/include -I/<>/Modules/IO/IPL/include -I/<>/Modules/IO/CSV/include -I/usr/include/hdf5/serial -I/<>/BUILD/Modules/ThirdParty/HDF5/src -I/<>/Modules/Filtering/GPUThresholding/include -I/<>/Modules/Filtering/GPUSmoothing/include -I/<>/Modules/Registration/GPUPDEDeformable/include -I/<>/Modules/Registration/GPUCommon/include -I/<>/Modules/Filtering/GPUImageFilterBase/include -I/<>/Modules/Filtering/GPUAnisotropicSmoothing/include -I/<>/Modules/Core/GPUFiniteDifference/include -I/<>/Modules/Core/GPUCommon/include -I/<>/Modules/IO/Mesh/include -I/<>/Modules/ThirdParty/GIFTI/src/gifticlib -I/<>/Modules/Registration/FEM/include -I/<>/Modules/Registration/PDEDeformable/include -I/<>/Modules/Numerics/FEM/include -I/<>/Modules/IO/SpatialObjects/include -I/<>/Modules/IO/XML/include -I/<>/BUILD/Modules/ThirdParty/Expat/src -I/<>/Modules/Numerics/Eigen/include -I/<>/Modules/Filtering/DiffusionTensorImage/include -I/<>/Modules/Registration/Common/include -I/<>/Modules/IO/Stimulate/include -I/<>/Modules/IO/LSM/include -I/<>/Modules/IO/BioRad/include -I/<>/Modules/Compatibility/Deprecated/include -I/<>/Modules/Compatibility/V3Compatibility/include -I/<>/Modules/Filtering/DisplacementField/include -I/<>/Modules/Filtering/Denoising/include -I/<>/Modules/Segmentation/DeformableMesh/include -I/<>/Modules/Filtering/Deconvolution/include -I/<>/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/BUILD/Modules/ThirdParty/DICOMParser/src/DICOMParser -I/<>/Modules/Filtering/Convolution/include -I/<>/Modules/Filtering/FFT/include -I/<>/Modules/Filtering/Colormap/include -I/<>/Modules/Segmentation/Classifiers/include -I/<>/Modules/Segmentation/BioCell/include -I/<>/Modules/Filtering/BiasCorrection/include -I/<>/Modules/Numerics/Polynomials/include -I/<>/Modules/Filtering/AntiAlias/include -I/<>/Modules/Segmentation/LevelSets/include -I/<>/Modules/Segmentation/SignedDistanceFunction/include -I/<>/Modules/Numerics/Optimizers/include -I/<>/Modules/Filtering/ImageFeature/include -I/<>/Modules/Filtering/ImageSources/include -I/<>/Modules/Filtering/ImageGradient/include -I/<>/Modules/Filtering/Smoothing/include -I/<>/Modules/Filtering/ImageCompare/include -I/<>/Modules/Filtering/FastMarching/include -I/<>/Modules/Core/QuadEdgeMesh/include -I/<>/Modules/Filtering/DistanceMap/include -I/<>/Modules/Numerics/NarrowBand/include -I/<>/Modules/Filtering/ImageLabel/include -I/<>/Modules/Filtering/BinaryMathematicalMorphology/include -I/<>/Modules/Filtering/MathematicalMorphology/include -I/<>/Modules/Segmentation/ConnectedComponents/include -I/<>/Modules/Filtering/Thresholding/include -I/<>/Modules/Filtering/ImageIntensity/include -I/<>/Modules/Filtering/Path/include -I/<>/Modules/Filtering/ImageStatistics/include -I/<>/Modules/Core/SpatialObjects/include -I/<>/Modules/Core/Mesh/include -I/<>/Modules/Filtering/ImageCompose/include -I/<>/Modules/Filtering/LabelMap/include -I/<>/Modules/Core/TestKernel/include -I/<>/Modules/IO/VTK/include -I/<>/Modules/IO/TIFF/include -I/usr/include/x86_64-linux-gnu -I/<>/BUILD/Modules/ThirdParty/TIFF/src -I/<>/Modules/IO/PNG/include -I/<>/BUILD/Modules/ThirdParty/PNG/src -I/<>/Modules/IO/NRRD/include -I/<>/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/BUILD/Modules/ThirdParty/NrrdIO/src/NrrdIO -I/<>/Modules/IO/NIFTI/include -I/usr/include/nifti -I/<>/Modules/IO/Meta/include -I/<>/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/BUILD/Modules/ThirdParty/MetaIO/src/MetaIO/src -I/<>/Modules/IO/JPEG/include -I/<>/BUILD/Modules/ThirdParty/JPEG/src -I/<>/Modules/IO/GIPL/include -I/<>/BUILD/Modules/ThirdParty/ZLIB/src -I/<>/Modules/IO/GDCM/include -I/usr/include/gdcm-2.8 -I/<>/Modules/IO/BMP/include -I/<>/Modules/IO/ImageBase/include -I/<>/BUILD/Modules/IO/ImageBase -I/<>/Modules/Filtering/AnisotropicSmoothing/include -I/<>/Modules/Filtering/ImageGrid/include -I/<>/Modules/Core/ImageFunction/include -I/<>/Modules/Core/Transform/include -I/<>/Modules/Numerics/Statistics/include -I/<>/BUILD/Modules/ThirdParty/Netlib -I/<>/Modules/Core/ImageAdaptors/include -I/<>/Modules/Filtering/CurvatureFlow/include -I/<>/Modules/Filtering/ImageFilterBase/include -I/<>/Modules/Core/FiniteDifference/include -I/<>/Modules/Core/Common/include -I/<>/BUILD/Modules/Core/Common -I/<>/Modules/ThirdParty/VNLInstantiation/include -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/core -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/BUILD/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/Modules/ThirdParty/VNL/src/vxl/core -I/<>/Modules/ThirdParty/VNL/src/vxl/vcl -I/<>/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -I/<>/BUILD/Modules/ThirdParty/KWSys/src -I/<>/Modules/ThirdParty/KWIML/src -I/<>/BUILD/Modules/ThirdParty/KWIML/src -I/usr/include/double-conversion -I/<>/BUILD/Wrapping/Typedefs -I/usr/include/python2.7 -I/<>/Wrapping/Generators/Python -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/<>/Modules/ThirdParty/VNL/src/vxl/core/vnl -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fno-strict-aliasing -w -o CMakeFiles/ITKLevelSetsPython.dir/itkUnsharpMaskLevelSetImageFilterPython.cpp.o -c /<>/BUILD/Wrapping/Modules/ITKLevelSets/itkUnsharpMaskLevelSetImageFilterPython.cpp make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' [100%] Linking CXX shared module ../../../lib/_ITKLevelSetsPython.so make[3]: Leaving directory '/<>/BUILD' make[3]: Entering directory '/<>/BUILD' cd /<>/BUILD/Wrapping/Modules/ITKLevelSets && /usr/bin/cmake -E cmake_link_script CMakeFiles/ITKLevelSetsPython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/nifti -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wl,-z,relro -Wl,--as-needed -shared -o ../../../lib/_ITKLevelSetsPython.so CMakeFiles/ITKLevelSetsPython.dir/ITKLevelSetsPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkLevelSetFunctionPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkSparseFieldLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkSparseFieldFourthOrderLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkSegmentationLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkShapePriorSegmentationLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkAnisotropicFourthOrderLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkCannySegmentationLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkCollidingFrontsImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkCurvesLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkGeodesicActiveContourLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkGeodesicActiveContourShapePriorLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkIsotropicFourthOrderLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkLaplacianSegmentationLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkNarrowBandCurvesLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkNarrowBandLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkNarrowBandThresholdSegmentationLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkParallelSparseFieldLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkReinitializeLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkSegmentationLevelSetFunctionPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkShapeDetectionLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkShapePriorMAPCostFunctionPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkShapePriorMAPCostFunctionBasePython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkThresholdSegmentationLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkUnsharpMaskLevelSetImageFilterPython.cpp.o CMakeFiles/ITKLevelSetsPython.dir/itkVectorThresholdSegmentationLevelSetImageFilterPython.cpp.o -ldouble-conversion -lz -ljpeg -lznz -lniftiio -lpng -ltiff /usr/lib/libi2d.so.12.3.6.2 /usr/lib/libdcmjpeg.so.12.3.6.2 /usr/lib/libijg8.so.12.3.6.2 /usr/lib/libijg12.so.12.3.6.2 /usr/lib/libijg16.so.12.3.6.2 /usr/lib/libdcmjpls.so.12.3.6.2 /usr/lib/libcmr.so.12.3.6.2 /usr/lib/libdcmwlm.so.12.3.6.2 /usr/lib/libdcmpstat.so.12.3.6.2 /usr/lib/libdcmrt.so.12.3.6.2 /usr/lib/libdcmseg.so.12.3.6.2 /usr/lib/libdcmtract.so.12.3.6.2 /usr/lib/libdcmpmap.so.12.3.6.2 ../../../lib/libITKDeprecated-4.12.so.1 ../../../lib/libITKIOLSM-4.12.so.1 -lexpat ../../../lib/libITKIOMesh-4.12.so.1 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so -lpthread -lsz -ldl -lm ../../../lib/libITKIOCSV-4.12.so.1 ../../../lib/libITKIOHDF5-4.12.so.1 ../../../lib/libITKIOMRC-4.12.so.1 ../../../lib/libITKOptimizersv4-4.12.so.1 ../../../lib/libITKReview-4.12.so.1 ../../../lib/libITKVideoIO-4.12.so.1 -lCharLS /usr/lib/libdcmtls.so.12.3.6.2 /usr/lib/libdcmsr.so.12.3.6.2 /usr/lib/libdcmimage.so.12.3.6.2 -ljpeg -lpng -ltiff -lxml2 /usr/lib/libdcmdsig.so.12.3.6.2 -lssl -lcrypto /usr/lib/libdcmqrdb.so.12.3.6.2 /usr/lib/libdcmnet.so.12.3.6.2 -lwrap /usr/lib/libdcmimgle.so.12.3.6.2 /usr/lib/libdcmfg.so.12.3.6.2 /usr/lib/libdcmiod.so.12.3.6.2 /usr/lib/libdcmdata.so.12.3.6.2 /usr/lib/liboflog.so.12.3.6.2 /usr/lib/libofstd.so.12.3.6.2 -licuuc -licudata -lnsl -lpthread ../../../lib/libITKDICOMParser-4.12.so.1 ../../../lib/libITKgiftiio-4.12.so.1 -lexpat ../../../lib/libITKIOBMP-4.12.so.1 ../../../lib/libITKIOGDCM-4.12.so.1 /usr/lib/x86_64-linux-gnu/libgdcmMSFF.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDICT.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmIOD.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmDSED.so.2.8.6 /usr/lib/x86_64-linux-gnu/libgdcmCommon.so.2.8.6 ../../../lib/libITKIOGIPL-4.12.so.1 ../../../lib/libITKIOJPEG-4.12.so.1 ../../../lib/libITKIOMeta-4.12.so.1 ../../../lib/libITKIONIFTI-4.12.so.1 ../../../lib/libITKIONRRD-4.12.so.1 ../../../lib/libITKNrrdIO-4.12.so.1 ../../../lib/libITKIOPNG-4.12.so.1 ../../../lib/libITKIOTIFF-4.12.so.1 ../../../lib/libITKIOVTK-4.12.so.1 ../../../lib/libITKLabelMap-4.12.so.1 ../../../lib/libITKQuadEdgeMesh-4.12.so.1 ../../../lib/libITKPolynomials-4.12.so.1 ../../../lib/libITKBiasCorrection-4.12.so.1 ../../../lib/libITKBioCell-4.12.so.1 ../../../lib/libITKFFT-4.12.so.1 -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads ../../../lib/libITKIOBioRad-4.12.so.1 ../../../lib/libITKIOStimulate-4.12.so.1 ../../../lib/libITKIOSpatialObjects-4.12.so.1 ../../../lib/libITKIOXML-4.12.so.1 ../../../lib/libITKFEM-4.12.so.1 ../../../lib/libITKMetaIO-4.12.so.1 -lz ../../../lib/libITKOptimizers-4.12.so.1 ../../../lib/libITKIOGE-4.12.so.1 ../../../lib/libITKIOSiemens-4.12.so.1 ../../../lib/libITKIOIPL-4.12.so.1 ../../../lib/libITKIOTransformHDF5-4.12.so.1 ../../../lib/libITKIOTransformInsightLegacy-4.12.so.1 ../../../lib/libITKIOTransformMatlab-4.12.so.1 ../../../lib/libITKIOTransformBase-4.12.so.1 ../../../lib/libITKTransformFactory-4.12.so.1 ../../../lib/libITKKLMRegionGrowing-4.12.so.1 ../../../lib/libITKVTK-4.12.so.1 ../../../lib/libITKWatersheds-4.12.so.1 ../../../lib/libITKStatistics-4.12.so.1 ../../../lib/libitkNetlibSlatec-4.12.so.1 ../../../lib/libITKSpatialObjects-4.12.so.1 ../../../lib/libITKMesh-4.12.so.1 ../../../lib/libITKTransform-4.12.so.1 ../../../lib/libITKPath-4.12.so.1 ../../../lib/libitkopenjpeg-4.12.so.1 ../../../lib/libITKIOImageBase-4.12.so.1 ../../../lib/libITKVideoCore-4.12.so.1 ../../../lib/libITKCommon-4.12.so.1 ../../../lib/libitksys-4.12.so.1 ../../../lib/libITKVNLInstantiation-4.12.so.1 ../../../lib/libitkvnl_algo-4.12.so.1 ../../../lib/libitkvnl-4.12.so.1 ../../../lib/libitkv3p_netlib-4.12.so.1 ../../../lib/libitknetlib-4.12.so.1 ../../../lib/libitkvcl-4.12.so.1 -lm -lpthread -ldl -lm make[3]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' [100%] Built target ITKLevelSetsPython make[2]: Leaving directory '/<>/BUILD' make[1]: Entering directory '/<>/BUILD' /usr/bin/cmake -E cmake_progress_start /<>/BUILD/CMakeFiles 0 make[1]: Leaving directory '/<>/BUILD' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' LD_LIBRARY_PATH=`pwd`/BUILD/lib:`pwd`/BUILD/Testing/Temporary dh_auto_test cd BUILD && make -j8 -Oline test ARGS\+=-j8 make[2]: Entering directory '/<>/BUILD' Running tests... make[2]: Leaving directory '/<>/BUILD' make[2]: Entering directory '/<>/BUILD' /usr/bin/ctest --force-new-ctest-process -j8 Test project /<>/BUILD Start 1400: itkAdditiveGaussianNoiseImageFilterTest Start 1402: itkShotNoiseImageFilterTest Start 1404: itkSpeckleNoiseImageFilterTest Start 1406: itkSaltAndPepperNoiseImageFilterTest Start 2120: itkJPEG2000Test00 Start 2620: GradientRecursiveGaussianImageFilterTest Start 1: itkkwiml.test Start 2: vcl_test_algorithm 1/2822 Test #1: itkkwiml.test ................................................................. Passed 0.02 sec Start 3: vcl_test_cctype 2/2822 Test #2: vcl_test_algorithm ............................................................ Passed 0.01 sec Start 4: vcl_test_cmath 3/2822 Test #3: vcl_test_cctype ............................................................... Passed 0.00 sec Start 5: vcl_test_compiler 4/2822 Test #4: vcl_test_cmath ................................................................ Passed 0.00 sec Start 6: vcl_test_complex 5/2822 Test #5: vcl_test_compiler ............................................................. Passed 0.00 sec Start 7: vcl_test_deque 6/2822 Test #6: vcl_test_complex .............................................................. Passed 0.00 sec Start 8: vcl_test_exception 7/2822 Test #7: vcl_test_deque ................................................................ Passed 0.00 sec Start 9: vcl_test_fstream 8/2822 Test #8: vcl_test_exception ............................................................ Passed 0.00 sec Start 10: vcl_test_iostream 9/2822 Test #9: vcl_test_fstream .............................................................. Passed 0.00 sec Start 11: vcl_test_iterator 10/2822 Test #10: vcl_test_iostream ............................................................. Passed 0.00 sec Start 12: vcl_test_list 11/2822 Test #11: vcl_test_iterator ............................................................. Passed 0.00 sec Start 13: vcl_test_limits 12/2822 Test #12: vcl_test_list ................................................................. Passed 0.00 sec Start 14: vcl_test_map 13/2822 Test #13: vcl_test_limits ............................................................... Passed 0.00 sec Start 15: vcl_test_memory 14/2822 Test #14: vcl_test_map .................................................................. Passed 0.00 sec Start 16: vcl_test_multimap 15/2822 Test #15: vcl_test_memory ............................................................... Passed 0.00 sec Start 17: vcl_test_new 16/2822 Test #16: vcl_test_multimap ............................................................. Passed 0.00 sec Start 18: vcl_test_set 17/2822 Test #17: vcl_test_new .................................................................. Passed 0.00 sec Start 19: vcl_test_string 18/2822 Test #18: vcl_test_set .................................................................. Passed 0.00 sec Start 20: vcl_test_sstream 19/2822 Test #19: vcl_test_string ............................................................... Passed 0.00 sec Start 21: vcl_test_vector 20/2822 Test #20: vcl_test_sstream .............................................................. Passed 0.00 sec Start 22: vcl_test_cstdio 21/2822 Test #21: vcl_test_vector ............................................................... Passed 0.00 sec Start 23: vcl_test_preprocessor 22/2822 Test #22: vcl_test_cstdio ............................................................... Passed 0.00 sec Start 24: vcl_test_atomic_count 23/2822 Test #23: vcl_test_preprocessor ......................................................... Passed 0.00 sec Start 25: netlib_test_lbfgs 24/2822 Test #24: vcl_test_atomic_count ......................................................... Passed 0.00 sec Start 26: netlib_test_lbfgsb 25/2822 Test #25: netlib_test_lbfgs ............................................................. Passed 0.00 sec Start 27: netlib_test1_lsqr 26/2822 Test #26: netlib_test_lbfgsb ............................................................ Passed 0.01 sec Start 28: netlib_test2_lsqr 27/2822 Test #27: netlib_test1_lsqr ............................................................. Passed 0.01 sec Start 29: netlib_test2_lsmr 28/2822 Test #28: netlib_test2_lsqr ............................................................. Passed 0.01 sec Start 30: netlib_test_slamch 29/2822 Test #29: netlib_test2_lsmr ............................................................. Passed 0.01 sec Start 31: netlib_test_tricall 30/2822 Test #30: netlib_test_slamch ............................................................ Passed 0.00 sec Start 32: netlib_test_integral 31/2822 Test #31: netlib_test_tricall ........................................................... Passed 0.00 sec Start 33: vnl_basic_operation_timings 32/2822 Test #32: netlib_test_integral .......................................................... Passed 0.01 sec Start 34: vnl_test_bignum 33/2822 Test #34: vnl_test_bignum ............................................................... Passed 0.02 sec Start 35: vnl_test_decnum 34/2822 Test #35: vnl_test_decnum ............................................................... Passed 0.03 sec Start 36: vnl_test_complex 35/2822 Test #1400: itkAdditiveGaussianNoiseImageFilterTest ....................................... Passed 0.16 sec Start 37: vnl_test_complexify 36/2822 Test #1402: itkShotNoiseImageFilterTest ................................................... Passed 0.16 sec Start 38: vnl_test_diag_matrix 37/2822 Test #1406: itkSaltAndPepperNoiseImageFilterTest .......................................... Passed 0.16 sec Start 39: vnl_test_diag_matrix_fixed 38/2822 Test #36: vnl_test_complex .............................................................. Passed 0.02 sec Start 40: vnl_test_file_matrix 39/2822 Test #37: vnl_test_complexify ........................................................... Passed 0.01 sec Start 41: vnl_test_finite 40/2822 Test #38: vnl_test_diag_matrix .......................................................... Passed 0.01 sec Start 42: vnl_test_inverse 41/2822 Test #39: vnl_test_diag_matrix_fixed .................................................... Passed 0.01 sec Start 43: vnl_test_math 42/2822 Test #40: vnl_test_file_matrix .......................................................... Passed 0.01 sec Start 44: vnl_test_matrix 43/2822 Test #1404: itkSpeckleNoiseImageFilterTest ................................................ Passed 0.17 sec Start 45: vnl_test_container_interface 44/2822 Test #42: vnl_test_inverse .............................................................. Passed 0.01 sec Start 46: vnl_test_matrix_exp 45/2822 Test #43: vnl_test_math ................................................................. Passed 0.01 sec Start 47: vnl_test_matrix_fixed 46/2822 Test #44: vnl_test_matrix ............................................................... Passed 0.01 sec Start 48: vnl_test_vector_fixed_ref 47/2822 Test #45: vnl_test_container_interface .................................................. Passed 0.00 sec Start 49: vnl_test_matrix_fixed_ref 48/2822 Test #46: vnl_test_matrix_exp ........................................................... Passed 0.01 sec Start 50: vnl_test_numeric_traits 49/2822 Test #47: vnl_test_matrix_fixed ......................................................... Passed 0.01 sec Start 51: vnl_test_na 50/2822 Test #48: vnl_test_vector_fixed_ref ..................................................... Passed 0.00 sec Start 52: vnl_test_random 51/2822 Test #2120: itkJPEG2000Test00 ............................................................. Passed 0.19 sec Start 53: vnl_test_rational 52/2822 Test #49: vnl_test_matrix_fixed_ref ..................................................... Passed 0.01 sec Start 54: vnl_test_polynomial 53/2822 Test #50: vnl_test_numeric_traits ....................................................... Passed 0.01 sec Start 55: vnl_test_real_polynomial 54/2822 Test #51: vnl_test_na ................................................................... Passed 0.01 sec Start 56: vnl_test_real_npolynomial 55/2822 Test #52: vnl_test_random ............................................................... Passed 0.01 sec Start 57: vnl_test_resize 56/2822 Test #53: vnl_test_rational ............................................................. Passed 0.01 sec Start 58: vnl_test_rotation_matrix 57/2822 Test #54: vnl_test_polynomial ........................................................... Passed 0.01 sec Start 59: vnl_test_sym_matrix 58/2822 Test #55: vnl_test_real_polynomial ...................................................... Passed 0.00 sec Start 60: vnl_test_transpose 59/2822 Test #56: vnl_test_real_npolynomial ..................................................... Passed 0.01 sec Start 61: vnl_test_fastops 60/2822 Test #57: vnl_test_resize ............................................................... Passed 0.01 sec Start 62: vnl_test_vector 61/2822 Test #58: vnl_test_rotation_matrix ...................................................... Passed 0.01 sec Start 63: vnl_test_gamma 62/2822 Test #59: vnl_test_sym_matrix ........................................................... Passed 0.00 sec Start 64: vnl_test_arithmetic 63/2822 Test #41: vnl_test_finite ............................................................... Passed 0.06 sec Start 65: vnl_test_alignment 64/2822 Test #60: vnl_test_transpose ............................................................ Passed 0.01 sec Start 66: vnl_test_hungarian_algorithm 65/2822 Test #61: vnl_test_fastops .............................................................. Passed 0.01 sec Start 67: vnl_test_integrant 66/2822 Test #62: vnl_test_vector ............................................................... Passed 0.01 sec Start 68: vnl_test_bessel 67/2822 Test #63: vnl_test_gamma ................................................................ Passed 0.01 sec Start 69: vnl_test_quaternion 68/2822 Test #64: vnl_test_arithmetic ........................................................... Passed 0.01 sec Start 70: vnl_test_crs_index 69/2822 Test #2620: GradientRecursiveGaussianImageFilterTest ...................................... Passed 0.23 sec Start 71: vnl_test_sparse_lst_sqr_function 70/2822 Test #67: vnl_test_integrant ............................................................ Passed 0.01 sec Start 72: vnl_test_power 71/2822 Test #68: vnl_test_bessel ............................................................... Passed 0.00 sec Start 73: vnl_test_sparse_matrix 72/2822 Test #69: vnl_test_quaternion ........................................................... Passed 0.01 sec Start 74: test_pow_log 73/2822 Test #70: vnl_test_crs_index ............................................................ Passed 0.01 sec Start 75: test_vnl_index_sort 74/2822 Test #71: vnl_test_sparse_lst_sqr_function .............................................. Passed 0.01 sec Start 76: vnl_algo_test_algo 75/2822 Test #72: vnl_test_power ................................................................ Passed 0.00 sec Start 77: vnl_algo_test_amoeba 76/2822 Test #73: vnl_test_sparse_matrix ........................................................ Passed 0.02 sec Start 78: vnl_algo_test_cholesky 77/2822 Test #74: test_pow_log .................................................................. Passed 0.01 sec Start 79: vnl_algo_test_complex_algo 78/2822 Test #75: test_vnl_index_sort ........................................................... Passed 0.01 sec Start 80: vnl_algo_test_complex_eigensystem 79/2822 Test #77: vnl_algo_test_amoeba .......................................................... Passed 0.01 sec Start 81: vnl_algo_test_convolve 80/2822 Test #76: vnl_algo_test_algo ............................................................ Passed 0.01 sec Start 82: vnl_algo_test_cpoly_roots 81/2822 Test #78: vnl_algo_test_cholesky ........................................................ Passed 0.00 sec Start 83: vnl_algo_test_determinant 82/2822 Test #79: vnl_algo_test_complex_algo .................................................... Passed 0.01 sec Start 84: vnl_algo_test_fft 83/2822 Test #80: vnl_algo_test_complex_eigensystem ............................................. Passed 0.01 sec Start 85: vnl_algo_test_fft1d 84/2822 Test #82: vnl_algo_test_cpoly_roots ..................................................... Passed 0.00 sec Start 86: vnl_algo_test_fft2d 85/2822 Test #83: vnl_algo_test_determinant ..................................................... Passed 0.01 sec Start 87: vnl_algo_test_functions 86/2822 Test #65: vnl_test_alignment ............................................................ Passed 0.06 sec Start 88: vnl_algo_test_generalized_eigensystem 87/2822 Test #84: vnl_algo_test_fft ............................................................. Passed 0.02 sec Start 89: vnl_algo_test_ldl_cholesky 88/2822 Test #86: vnl_algo_test_fft2d ........................................................... Passed 0.02 sec Start 90: vnl_algo_test_levenberg_marquardt 89/2822 Test #87: vnl_algo_test_functions ....................................................... Passed 0.02 sec Start 91: vnl_algo_test_matrix_update 90/2822 Test #88: vnl_algo_test_generalized_eigensystem ......................................... Passed 0.01 sec Start 92: vnl_algo_test_minimizers 91/2822 Test #89: vnl_algo_test_ldl_cholesky .................................................... Passed 0.00 sec Start 93: vnl_algo_test_powell 92/2822 Test #90: vnl_algo_test_levenberg_marquardt ............................................. Passed 0.01 sec Start 94: vnl_algo_test_qr 93/2822 Test #91: vnl_algo_test_matrix_update ................................................... Passed 0.01 sec Start 95: vnl_algo_test_qsvd 94/2822 Test #92: vnl_algo_test_minimizers ...................................................... Passed 0.00 sec Start 96: vnl_algo_test_rank 95/2822 Test #93: vnl_algo_test_powell .......................................................... Passed 0.01 sec Start 97: vnl_algo_test_real_eigensystem 96/2822 Test #94: vnl_algo_test_qr .............................................................. Passed 0.01 sec Start 98: vnl_algo_test_rnpoly_roots 97/2822 Test #95: vnl_algo_test_qsvd ............................................................ Passed 0.01 sec Start 99: vnl_algo_test_rpoly_roots 98/2822 Test #96: vnl_algo_test_rank ............................................................ Passed 0.01 sec Start 100: vnl_algo_test_integral 99/2822 Test #97: vnl_algo_test_real_eigensystem ................................................ Passed 0.01 sec Start 101: vnl_algo_test_solve_qp 100/2822 Test #98: vnl_algo_test_rnpoly_roots .................................................... Passed 0.01 sec Start 102: vnl_algo_test_sparse_lu 101/2822 Test #99: vnl_algo_test_rpoly_roots ..................................................... Passed 0.01 sec Start 103: vnl_algo_test_bracket_minimum 102/2822 Test #100: vnl_algo_test_integral ........................................................ Passed 0.01 sec Start 104: vnl_algo_test_brent_minimizer 103/2822 Test #101: vnl_algo_test_solve_qp ........................................................ Passed 0.01 sec Start 105: vnl_algo_test_sparse_lm 104/2822 Test #102: vnl_algo_test_sparse_lu ....................................................... Passed 0.01 sec Start 106: vnl_algo_test_sparse_matrix 105/2822 Test #103: vnl_algo_test_bracket_minimum ................................................. Passed 0.01 sec Start 107: vnl_algo_test_svd 106/2822 Test #104: vnl_algo_test_brent_minimizer ................................................. Passed 0.02 sec Start 108: vnl_algo_test_svd_fixed 107/2822 Test #106: vnl_algo_test_sparse_matrix ................................................... Passed 0.01 sec Start 109: vnl_algo_test_symmetric_eigensystem 108/2822 Test #107: vnl_algo_test_svd ............................................................. Passed 0.02 sec Start 110: testlib_assert 109/2822 Test #85: vnl_algo_test_fft1d ........................................................... Passed 0.09 sec Start 111: testlib_macros 110/2822 Test #110: testlib_assert ................................................................ Passed 0.01 sec Start 112: testlib_args 111/2822 Test #111: testlib_macros ................................................................ Passed 0.00 sec Start 113: testlib_root_dir 112/2822 Test #112: testlib_args .................................................................. Passed 0.00 sec Start 114: testlib_all 113/2822 Test #113: testlib_root_dir .............................................................. Passed 0.00 sec Start 115: testlib_test_link 114/2822 Test #114: testlib_all ................................................................... Passed 0.00 sec Start 116: ITKCommonInDoxygenGroup 115/2822 Test #115: testlib_test_link ............................................................. Passed 0.01 sec Start 117: ITKFiniteDifferenceInDoxygenGroup 116/2822 Test #117: ITKFiniteDifferenceInDoxygenGroup ............................................. Passed 0.02 sec Start 118: ITKImageFilterBaseInDoxygenGroup 117/2822 Test #109: vnl_algo_test_symmetric_eigensystem ........................................... Passed 0.06 sec Start 119: ITKCurvatureFlowInDoxygenGroup 118/2822 Test #118: ITKImageFilterBaseInDoxygenGroup .............................................. Passed 0.02 sec Start 120: ITKImageAdaptorsInDoxygenGroup 119/2822 Test #108: vnl_algo_test_svd_fixed ....................................................... Passed 0.08 sec Start 121: ITKStatisticsInDoxygenGroup 120/2822 Test #119: ITKCurvatureFlowInDoxygenGroup ................................................ Passed 0.03 sec Start 122: ITKTransformInDoxygenGroup 121/2822 Test #120: ITKImageAdaptorsInDoxygenGroup ................................................ Passed 0.04 sec Start 123: ITKImageFunctionInDoxygenGroup 122/2822 Test #122: ITKTransformInDoxygenGroup .................................................... Passed 0.04 sec Start 124: ITKImageGridInDoxygenGroup 123/2822 Test #123: ITKImageFunctionInDoxygenGroup ................................................ Passed 0.03 sec Start 125: ITKAnisotropicSmoothingInDoxygenGroup 124/2822 Test #116: ITKCommonInDoxygenGroup ....................................................... Passed 0.11 sec Start 126: ITKIOImageBaseInDoxygenGroup 125/2822 Test #121: ITKStatisticsInDoxygenGroup ................................................... Passed 0.07 sec Start 127: ITKIOBMPInDoxygenGroup 126/2822 Test #124: ITKImageGridInDoxygenGroup .................................................... Passed 0.02 sec Start 128: ITKIOGDCMInDoxygenGroup 127/2822 Test #125: ITKAnisotropicSmoothingInDoxygenGroup ......................................... Passed 0.02 sec Start 129: ITKIOGIPLInDoxygenGroup 128/2822 Test #126: ITKIOImageBaseInDoxygenGroup .................................................. Passed 0.02 sec Start 130: ITKIOJPEGInDoxygenGroup 129/2822 Test #127: ITKIOBMPInDoxygenGroup ........................................................ Passed 0.02 sec Start 131: ITKIOMetaInDoxygenGroup 130/2822 Test #128: ITKIOGDCMInDoxygenGroup ....................................................... Passed 0.02 sec Start 132: ITKIONIFTIInDoxygenGroup 131/2822 Test #129: ITKIOGIPLInDoxygenGroup ....................................................... Passed 0.02 sec Start 133: ITKIONRRDInDoxygenGroup 132/2822 Test #130: ITKIOJPEGInDoxygenGroup ....................................................... Passed 0.02 sec Start 134: ITKIOPNGInDoxygenGroup 133/2822 Test #131: ITKIOMetaInDoxygenGroup ....................................................... Passed 0.02 sec Start 135: ITKIOTIFFInDoxygenGroup 134/2822 Test #132: ITKIONIFTIInDoxygenGroup ...................................................... Passed 0.02 sec Start 136: ITKIOVTKInDoxygenGroup 135/2822 Test #133: ITKIONRRDInDoxygenGroup ....................................................... Passed 0.02 sec Start 137: ITKTestKernelInDoxygenGroup 136/2822 Test #134: ITKIOPNGInDoxygenGroup ........................................................ Passed 0.02 sec Start 138: itkGradientAnisotropicDiffusionImageFilterTest 137/2822 Test #135: ITKIOTIFFInDoxygenGroup ....................................................... Passed 0.02 sec Start 139: itkCurvatureAnisotropicDiffusionImageFilterTest 138/2822 Test #136: ITKIOVTKInDoxygenGroup ........................................................ Passed 0.02 sec Start 140: itkMinMaxCurvatureFlowImageFilterTest 139/2822 Test #137: ITKTestKernelInDoxygenGroup ................................................... Passed 0.02 sec Start 141: itkVectorAnisotropicDiffusionImageFilterTest 140/2822 Test #105: vnl_algo_test_sparse_lm ....................................................... Passed 0.26 sec Start 142: itkGradientAnisotropicDiffusionImageFilterTest2 141/2822 Test #138: itkGradientAnisotropicDiffusionImageFilterTest ................................ Passed 0.06 sec Start 143: ITKLabelMapInDoxygenGroup 142/2822 Test #139: itkCurvatureAnisotropicDiffusionImageFilterTest ............................... Passed 0.07 sec Start 144: ITKImageComposeInDoxygenGroup 143/2822 Test #141: itkVectorAnisotropicDiffusionImageFilterTest .................................. Passed 0.07 sec Start 145: ITKMeshInDoxygenGroup 144/2822 Test #144: ITKImageComposeInDoxygenGroup ................................................. Passed 0.02 sec Start 146: ITKSpatialObjectsInDoxygenGroup 145/2822 Test #145: ITKMeshInDoxygenGroup ......................................................... Passed 0.03 sec Start 147: ITKImageStatisticsInDoxygenGroup 146/2822 Test #143: ITKLabelMapInDoxygenGroup ..................................................... Passed 0.06 sec Start 148: ITKPathInDoxygenGroup 147/2822 Test #147: ITKImageStatisticsInDoxygenGroup .............................................. Passed 0.02 sec Start 149: ITKImageIntensityInDoxygenGroup 148/2822 Test #148: ITKPathInDoxygenGroup ......................................................... Passed 0.03 sec Start 150: ITKThresholdingInDoxygenGroup 149/2822 Test #149: ITKImageIntensityInDoxygenGroup ............................................... Passed 0.03 sec Start 151: ITKConnectedComponentsInDoxygenGroup 150/2822 Test #150: ITKThresholdingInDoxygenGroup ................................................. Passed 0.02 sec Start 152: ITKMathematicalMorphologyInDoxygenGroup 151/2822 Test #146: ITKSpatialObjectsInDoxygenGroup ............................................... Passed 0.08 sec Start 153: ITKBinaryMathematicalMorphologyInDoxygenGroup 152/2822 Test #142: itkGradientAnisotropicDiffusionImageFilterTest2 ............................... Passed 0.15 sec Start 154: ITKImageLabelInDoxygenGroup 153/2822 Test #151: ITKConnectedComponentsInDoxygenGroup .......................................... Passed 0.02 sec Start 155: ITKNarrowBandInDoxygenGroup 154/2822 Test #152: ITKMathematicalMorphologyInDoxygenGroup ....................................... Passed 0.02 sec Start 156: ITKDistanceMapInDoxygenGroup 155/2822 Test #153: ITKBinaryMathematicalMorphologyInDoxygenGroup ................................. Passed 0.02 sec Start 157: ITKQuadEdgeMeshInDoxygenGroup 156/2822 Test #154: ITKImageLabelInDoxygenGroup ................................................... Passed 0.02 sec Start 158: ITKFastMarchingInDoxygenGroup 157/2822 Test #155: ITKNarrowBandInDoxygenGroup ................................................... Passed 0.02 sec Start 159: ITKImageCompareInDoxygenGroup 158/2822 Test #156: ITKDistanceMapInDoxygenGroup .................................................. Passed 0.02 sec Start 160: ITKSmoothingInDoxygenGroup 159/2822 Test #157: ITKQuadEdgeMeshInDoxygenGroup ................................................. Passed 0.03 sec Start 161: ITKImageGradientInDoxygenGroup 160/2822 Test #158: ITKFastMarchingInDoxygenGroup ................................................. Passed 0.02 sec Start 162: ITKImageSourcesInDoxygenGroup 161/2822 Test #159: ITKImageCompareInDoxygenGroup ................................................. Passed 0.02 sec Start 163: ITKImageFeatureInDoxygenGroup 162/2822 Test #160: ITKSmoothingInDoxygenGroup .................................................... Passed 0.02 sec Start 164: ITKOptimizersInDoxygenGroup 163/2822 Test #161: ITKImageGradientInDoxygenGroup ................................................ Passed 0.02 sec Start 165: ITKSignedDistanceFunctionInDoxygenGroup 164/2822 Test #162: ITKImageSourcesInDoxygenGroup ................................................. Passed 0.02 sec Start 166: ITKLevelSetsInDoxygenGroup 165/2822 Test #164: ITKOptimizersInDoxygenGroup ................................................... Passed 0.02 sec Start 167: ITKAntiAliasInDoxygenGroup 166/2822 Test #163: ITKImageFeatureInDoxygenGroup ................................................. Passed 0.02 sec Start 168: itkAntiAliasBinaryImageFilterTest 167/2822 Test #165: ITKSignedDistanceFunctionInDoxygenGroup ....................................... Passed 0.02 sec Start 169: ITKPolynomialsInDoxygenGroup 168/2822 Test #167: ITKAntiAliasInDoxygenGroup .................................................... Passed 0.02 sec Start 170: ITKBiasCorrectionInDoxygenGroup 169/2822 Test #166: ITKLevelSetsInDoxygenGroup .................................................... Passed 0.03 sec Start 171: itkCompositeValleyFunctionTest 170/2822 Test #140: itkMinMaxCurvatureFlowImageFilterTest ......................................... Passed 0.28 sec Start 172: itkMRIBiasFieldCorrectionFilterTest 171/2822 Test #169: ITKPolynomialsInDoxygenGroup .................................................. Passed 0.04 sec Start 173: itkN4BiasFieldCorrectionImageFilterTest1 172/2822 Test #170: ITKBiasCorrectionInDoxygenGroup ............................................... Passed 0.04 sec Start 174: itkN4BiasFieldCorrectionImageFilterTest2 173/2822 Test #171: itkCompositeValleyFunctionTest ................................................ Passed 0.10 sec Start 175: itkN4BiasFieldCorrectionImageFilterTest3 174/2822 Test #168: itkAntiAliasBinaryImageFilterTest ............................................. Passed 0.19 sec Start 176: itkErodeObjectMorphologyImageFilterTest 175/2822 Test #176: itkErodeObjectMorphologyImageFilterTest ....................................... Passed 0.06 sec Start 177: itkBinaryClosingByReconstructionImageFilterTest 176/2822 Test #177: itkBinaryClosingByReconstructionImageFilterTest ............................... Passed 0.08 sec Start 178: itkBinaryDilateImageFilterTest 177/2822 Test #81: vnl_algo_test_convolve ........................................................ Passed 0.88 sec Start 179: itkBinaryDilateImageFilterTest2 178/2822 Test #178: itkBinaryDilateImageFilterTest ................................................ Passed 0.04 sec Start 180: itkBinaryDilateImageFilterTest-100-0-0 179/2822 Test #179: itkBinaryDilateImageFilterTest2 ............................................... Passed 0.04 sec Start 181: itkBinaryDilateImageFilterTest-100-0-1 180/2822 Test #180: itkBinaryDilateImageFilterTest-100-0-0 ........................................ Passed 0.06 sec Start 182: itkBinaryDilateImageFilterTest-100-150-0 181/2822 Test #181: itkBinaryDilateImageFilterTest-100-0-1 ........................................ Passed 0.05 sec Start 183: itkBinaryDilateImageFilterTest-100-150-1 182/2822 Test #183: itkBinaryDilateImageFilterTest-100-150-1 ...................................... Passed 0.07 sec Start 184: itkBinaryDilateImageFilterTest-200-0-0 183/2822 Test #182: itkBinaryDilateImageFilterTest-100-150-0 ...................................... Passed 0.08 sec Start 185: itkBinaryDilateImageFilterTest-200-0-1 184/2822 Test #185: itkBinaryDilateImageFilterTest-200-0-1 ........................................ Passed 0.05 sec Start 186: itkBinaryDilateImageFilterTest-200-150-0 185/2822 Test #184: itkBinaryDilateImageFilterTest-200-0-0 ........................................ Passed 0.05 sec Start 187: itkBinaryDilateImageFilterTest-200-150-1 186/2822 Test #186: itkBinaryDilateImageFilterTest-200-150-0 ...................................... Passed 0.06 sec Start 188: itkBinaryErodeImageFilterTest 187/2822 Test #187: itkBinaryDilateImageFilterTest-200-150-1 ...................................... Passed 0.06 sec Start 189: itkBinaryErodeImageFilterTest-100-0-0 188/2822 Test #188: itkBinaryErodeImageFilterTest ................................................. Passed 0.05 sec Start 190: itkBinaryErodeImageFilterTest-100-0-1 189/2822 Test #189: itkBinaryErodeImageFilterTest-100-0-0 ......................................... Passed 0.07 sec Start 191: itkBinaryErodeImageFilterTest-100-150-0 190/2822 Test #190: itkBinaryErodeImageFilterTest-100-0-1 ......................................... Passed 0.06 sec Start 192: itkBinaryErodeImageFilterTest-100-150-1 191/2822 Test #191: itkBinaryErodeImageFilterTest-100-150-0 ....................................... Passed 0.06 sec Start 193: itkBinaryErodeImageFilterTest-200-0-0 192/2822 Test #192: itkBinaryErodeImageFilterTest-100-150-1 ....................................... Passed 0.06 sec Start 194: itkBinaryErodeImageFilterTest-200-0-1 193/2822 Test #173: itkN4BiasFieldCorrectionImageFilterTest1 ...................................... Passed 0.73 sec Start 195: itkBinaryErodeImageFilterTest-200-150-0 194/2822 Test #193: itkBinaryErodeImageFilterTest-200-0-0 ......................................... Passed 0.06 sec Start 196: itkBinaryErodeImageFilterTest-200-150-1 195/2822 Test #174: itkN4BiasFieldCorrectionImageFilterTest2 ...................................... Passed 0.77 sec Start 197: itkBinaryMorphologicalClosingImageFilterTest 196/2822 Test #194: itkBinaryErodeImageFilterTest-200-0-1 ......................................... Passed 0.07 sec Start 198: itkBinaryMorphologicalClosingImageFilterTestUnsafe 197/2822 Test #195: itkBinaryErodeImageFilterTest-200-150-0 ....................................... Passed 0.07 sec Start 199: itkBinaryMorphologicalOpeningImageFilterTest 198/2822 Test #196: itkBinaryErodeImageFilterTest-200-150-1 ....................................... Passed 0.08 sec Start 200: itkBinaryOpeningByReconstructionImageFilterTest 199/2822 Test #172: itkMRIBiasFieldCorrectionFilterTest ........................................... Passed 0.87 sec Start 201: itkBinaryThinningImageFilterTest 200/2822 Test #197: itkBinaryMorphologicalClosingImageFilterTest .................................. Passed 0.09 sec Start 202: ITKBioCellInDoxygenGroup 201/2822 Test #199: itkBinaryMorphologicalOpeningImageFilterTest .................................. Passed 0.08 sec Start 203: itkBioCellTest 202/2822 Test #198: itkBinaryMorphologicalClosingImageFilterTestUnsafe ............................ Passed 0.09 sec Start 204: itkBioGenomeTest 203/2822 Test #202: ITKBioCellInDoxygenGroup ...................................................... Passed 0.03 sec Start 205: itkBioCellularAggregateTest 204/2822 Test #175: itkN4BiasFieldCorrectionImageFilterTest3 ...................................... Passed 0.83 sec Start 206: itkBioGeneNetworkTest 205/2822 Test #200: itkBinaryOpeningByReconstructionImageFilterTest ............................... Passed 0.08 sec Start 207: itkBioGeneTest 206/2822 Test #203: itkBioCellTest ................................................................ Passed 0.05 sec Start 208: ITKClassifiersInDoxygenGroup 207/2822 Test #66: vnl_test_hungarian_algorithm .................................................. Passed 1.58 sec Start 209: itkBayesianClassifierImageFilterTest1 208/2822 Test #204: itkBioGenomeTest .............................................................. Passed 0.05 sec Start 210: itkBayesianClassifierImageFilterTest2 209/2822 Test #205: itkBioCellularAggregateTest ................................................... Passed 0.05 sec Start 211: itkKmeansModelEstimatorTest 210/2822 Test #206: itkBioGeneNetworkTest ......................................................... Passed 0.04 sec Start 212: itkImageClassifierFilterTest 211/2822 Test #208: ITKClassifiersInDoxygenGroup .................................................. Passed 0.03 sec Start 213: itkSampleClassifierFilterTest1 212/2822 Test #207: itkBioGeneTest ................................................................ Passed 0.04 sec Start 214: itkSampleClassifierFilterTest2 213/2822 Test #211: itkKmeansModelEstimatorTest ................................................... Passed 0.05 sec Start 215: itkSampleClassifierFilterTest3 214/2822 Test #213: itkSampleClassifierFilterTest1 ................................................ Passed 0.04 sec Start 216: itkSampleClassifierFilterTest4 215/2822 Test #214: itkSampleClassifierFilterTest2 ................................................ Passed 0.06 sec Start 217: itkSampleClassifierFilterTest5 216/2822 Test #215: itkSampleClassifierFilterTest3 ................................................ Passed 0.04 sec Start 218: itkSampleClassifierFilterTest6 217/2822 Test #216: itkSampleClassifierFilterTest4 ................................................ Passed 0.06 sec Start 219: itkSampleClassifierFilterTest7 218/2822 Test #217: itkSampleClassifierFilterTest5 ................................................ Passed 0.05 sec Start 220: itkSupervisedImageClassifierTest 219/2822 Test #218: itkSampleClassifierFilterTest6 ................................................ Passed 0.06 sec Start 221: itkScalarImageKmeansImageFilter3DTest 220/2822 Test #220: itkSupervisedImageClassifierTest .............................................. Passed 0.05 sec Start 222: ITKColormapInDoxygenGroup 221/2822 Test #219: itkSampleClassifierFilterTest7 ................................................ Passed 0.09 sec Start 223: itkCustomColormapFunctionTest 222/2822 Test #222: ITKColormapInDoxygenGroup ..................................................... Passed 0.03 sec Start 224: RGBColormapTest_red 223/2822 Test #223: itkCustomColormapFunctionTest ................................................. Passed 0.07 sec Start 225: RGBColormapTest_green 224/2822 Test #209: itkBayesianClassifierImageFilterTest1 ......................................... Passed 0.32 sec Start 226: RGBColormapTest_blue 225/2822 Test #224: RGBColormapTest_red ........................................................... Passed 0.12 sec Start 227: RGBColormapTest_hot 226/2822 Test #210: itkBayesianClassifierImageFilterTest2 ......................................... Passed 0.34 sec Start 228: RGBColormapTest_cool 227/2822 Test #212: itkImageClassifierFilterTest .................................................. Passed 0.35 sec Start 229: RGBColormapTest_spring 228/2822 Test #225: RGBColormapTest_green ......................................................... Passed 0.11 sec Start 230: RGBColormapTest_summer 229/2822 Test #226: RGBColormapTest_blue .......................................................... Passed 0.08 sec Start 231: RGBColormapTest_autumn 230/2822 Test #227: RGBColormapTest_hot ........................................................... Passed 0.12 sec Start 232: RGBColormapTest_winter 231/2822 Test #229: RGBColormapTest_spring ........................................................ Passed 0.10 sec Start 233: RGBColormapTest_copper 232/2822 Test #228: RGBColormapTest_cool .......................................................... Passed 0.12 sec Start 234: RGBColormapTest_hsv 233/2822 Test #230: RGBColormapTest_summer ........................................................ Passed 0.09 sec Start 235: RGBColormapTest_jet 234/2822 Test #231: RGBColormapTest_autumn ........................................................ Passed 0.10 sec Start 236: RGBColormapTest_overunder 235/2822 Test #233: RGBColormapTest_copper ........................................................ Passed 0.08 sec Start 237: itkMathTest 236/2822 Test #237: itkMathTest ................................................................... Passed 0.01 sec Start 238: SystemInformation 237/2822 Test #232: RGBColormapTest_winter ........................................................ Passed 0.10 sec Start 239: itkVersionTest 238/2822 Test #234: RGBColormapTest_hsv ........................................................... Passed 0.09 sec Start 240: itkAbortProcessObjectTest 239/2822 Test #238: SystemInformation ............................................................. Passed 0.01 sec Start 241: itkCommandObserverObjectTest 240/2822 Test #236: RGBColormapTest_overunder ..................................................... Passed 0.09 sec Start 242: itkAdaptorComparisonTest 241/2822 Test #235: RGBColormapTest_jet ........................................................... Passed 0.10 sec Start 243: itkThreadedIndexedContainerPartitionerTest 242/2822 Test #241: itkCommandObserverObjectTest .................................................. Passed 0.05 sec Start 244: itkThreadedIteratorRangePartitionerTest 243/2822 Test #239: itkVersionTest ................................................................ Passed 0.06 sec Start 245: itkThreadedIteratorRangePartitionerTest2 244/2822 Test #240: itkAbortProcessObjectTest ..................................................... Passed 0.07 sec Start 246: itkThreadedIteratorRangePartitionerTest3 245/2822 Test #243: itkThreadedIndexedContainerPartitionerTest .................................... Passed 0.07 sec Start 247: itkImageAdaptorPipeLineTest 246/2822 Test #244: itkThreadedIteratorRangePartitionerTest ....................................... Passed 0.05 sec Start 248: itkThreadedImageRegionPartitionerTest 247/2822 Test #245: itkThreadedIteratorRangePartitionerTest2 ...................................... Passed 0.05 sec Start 249: itkImportContainerTest 248/2822 Test #242: itkAdaptorComparisonTest ...................................................... Passed 0.09 sec Start 250: itkImportImageTest 249/2822 Test #246: itkThreadedIteratorRangePartitionerTest3 ...................................... Passed 0.05 sec Start 251: itkCovariantVectorGeometryTest 250/2822 Test #247: itkImageAdaptorPipeLineTest ................................................... Passed 0.05 sec Start 252: itkDataTypeTest 251/2822 Test #248: itkThreadedImageRegionPartitionerTest ......................................... Passed 0.05 sec Start 253: itkDecoratorTest 252/2822 Test #249: itkImportContainerTest ........................................................ Passed 0.05 sec Start 254: itkExtractImage3Dto2DTest 253/2822 Test #250: itkImportImageTest ............................................................ Passed 0.05 sec Start 255: itkExtractImageTest 254/2822 Test #251: itkCovariantVectorGeometryTest ................................................ Passed 0.04 sec Start 256: itkFilterDispatchTest 255/2822 Test #252: itkDataTypeTest ............................................................... Passed 0.04 sec Start 257: itkFloodFilledSpatialFunctionTest 256/2822 Test #253: itkDecoratorTest .............................................................. Passed 0.05 sec Start 258: itkFloodFillIteratorTest 257/2822 Test #254: itkExtractImage3Dto2DTest ..................................................... Passed 0.05 sec Start 259: itkAnnulusOperatorTest 258/2822 Test #256: itkFilterDispatchTest ......................................................... Passed 0.04 sec Start 260: itkColorTableTest1 259/2822 Test #255: itkExtractImageTest ........................................................... Passed 0.05 sec Start 261: itkColorTableTest2 260/2822 Test #257: itkFloodFilledSpatialFunctionTest ............................................. Passed 0.04 sec Start 262: itkDirectoryTest 261/2822 Test #258: itkFloodFillIteratorTest ...................................................... Passed 0.04 sec Start 263: itkDerivativeOperatorTest 262/2822 Test #259: itkAnnulusOperatorTest ........................................................ Passed 0.05 sec Start 264: itkMultipleLogOutputTest 263/2822 Test #262: itkDirectoryTest .............................................................. Passed 0.04 sec Start 265: itkFixedArrayTest 264/2822 Test #260: itkColorTableTest1 ............................................................ Passed 0.09 sec Start 266: itkImageTransformTest 265/2822 Test #261: itkColorTableTest2 ............................................................ Passed 0.09 sec Start 267: itkMinimumMaximumImageCalculatorTest 266/2822 Test #264: itkMultipleLogOutputTest ...................................................... Passed 0.05 sec Start 268: itkFixedArrayTest2 267/2822 Test #263: itkDerivativeOperatorTest ..................................................... Passed 0.05 sec Start 269: itkArrayTest 268/2822 Test #265: itkFixedArrayTest ............................................................. Passed 0.05 sec Start 270: itkMersenneTwisterRandomVariateGeneratorTest 269/2822 Test #266: itkImageTransformTest ......................................................... Passed 0.04 sec Start 271: itkArray2DTest 270/2822 Test #269: itkArrayTest .................................................................. Passed 0.04 sec Start 272: itkAutoPointerTest 271/2822 Test #267: itkMinimumMaximumImageCalculatorTest .......................................... Passed 0.04 sec Start 273: itkBarrierTest 272/2822 Test #271: itkArray2DTest ................................................................ Passed 0.04 sec Start 274: itkConditionVariableTest 273/2822 Test #272: itkAutoPointerTest ............................................................ Passed 0.04 sec Start 275: itkTimeStampTest 274/2822 Test #273: itkBarrierTest ................................................................ Passed 0.07 sec Start 276: itkBoundingBoxTest 275/2822 Test #270: itkMersenneTwisterRandomVariateGeneratorTest .................................. Passed 0.10 sec Start 277: itkBoundaryConditionTest 276/2822 Test #276: itkBoundingBoxTest ............................................................ Passed 0.05 sec Start 278: itkByteSwapTest 277/2822 Test #277: itkBoundaryConditionTest ...................................................... Passed 0.05 sec Start 279: itkBSplineInterpolationWeightFunctionTest 278/2822 Test #278: itkByteSwapTest ............................................................... Passed 0.04 sec Start 280: itkBSplineKernelFunctionTest 279/2822 Test #279: itkBSplineInterpolationWeightFunctionTest ..................................... Passed 0.05 sec Start 281: VNLSparseLUSolverTraitsTest 280/2822 Test #280: itkBSplineKernelFunctionTest .................................................. Passed 0.05 sec Start 282: itkGaussianDerivativeOperatorTest 281/2822 Test #274: itkConditionVariableTest ...................................................... Passed 0.18 sec Start 283: itkConstNeighborhoodIteratorTest 282/2822 Test #281: VNLSparseLUSolverTraitsTest ................................................... Passed 0.04 sec Start 284: itkShapedNeighborhoodIteratorTest 283/2822 Test #282: itkGaussianDerivativeOperatorTest ............................................. Passed 0.05 sec Start 285: itkConstShapedNeighborhoodIteratorTest 284/2822 Test #283: itkConstNeighborhoodIteratorTest .............................................. Passed 0.05 sec Start 286: itkConstShapedNeighborhoodIteratorTest2 285/2822 Test #284: itkShapedNeighborhoodIteratorTest ............................................. Passed 0.05 sec Start 287: itkEventObjectTest 286/2822 Test #285: itkConstShapedNeighborhoodIteratorTest ........................................ Passed 0.07 sec Start 288: itkMathCastWithRangeCheckTest 287/2822 Test #286: itkConstShapedNeighborhoodIteratorTest2 ....................................... Passed 0.06 sec Start 289: itkMathRoundProfileTest1 288/2822 Test #201: itkBinaryThinningImageFilterTest .............................................. Passed 1.32 sec Start 290: itkMathRoundTest 289/2822 Test #287: itkEventObjectTest ............................................................ Passed 0.06 sec Start 291: itkMathRoundTest2 290/2822 Test #289: itkMathRoundProfileTest1 ...................................................... Passed 0.05 sec Start 292: itkModifiedTimeTest 291/2822 Test #290: itkMathRoundTest .............................................................. Passed 0.06 sec Start 293: itkExceptionObjectTest 292/2822 Test #291: itkMathRoundTest2 ............................................................. Passed 0.05 sec Start 294: itkFileOutputWindowTest 293/2822 Test #268: itkFixedArrayTest2 ............................................................ Passed 0.45 sec Start 295: itkFiniteCylinderSpatialFunctionTest 294/2822 Test #292: itkModifiedTimeTest ........................................................... Passed 0.04 sec Start 296: itkGaussianSpatialFunctionTest1 295/2822 Test #293: itkExceptionObjectTest ........................................................ Passed 0.04 sec Start 297: itkGaussianSpatialFunctionTest2 296/2822 Test #294: itkFileOutputWindowTest ....................................................... Passed 0.04 sec Start 298: itkCrossHelperTest 297/2822 Test #295: itkFiniteCylinderSpatialFunctionTest .......................................... Passed 0.05 sec Start 299: itkImageIteratorTest 298/2822 Test #296: itkGaussianSpatialFunctionTest1 ............................................... Passed 0.04 sec Start 300: itkImageIteratorWithIndexTest 299/2822 Test #297: itkGaussianSpatialFunctionTest2 ............................................... Passed 0.05 sec Start 301: itkImageRegionIteratorTest 300/2822 Test #298: itkCrossHelperTest ............................................................ Passed 0.07 sec Start 302: itkImageScanlineIteratorTest1 301/2822 Test #299: itkImageIteratorTest .......................................................... Passed 0.05 sec Start 303: itkImageRegionTest 302/2822 Test #301: itkImageRegionIteratorTest .................................................... Passed 0.04 sec Start 304: itkImageRegionExclusionIteratorWithIndexTest 303/2822 Test #302: itkImageScanlineIteratorTest1 ................................................. Passed 0.04 sec Start 305: itkImageReverseIteratorTest 304/2822 Test #303: itkImageRegionTest ............................................................ Passed 0.04 sec Start 306: itkImageDuplicatorTest 305/2822 Test #304: itkImageRegionExclusionIteratorWithIndexTest .................................. Passed 0.07 sec Start 307: itkImageIteratorsForwardBackwardTest 306/2822 Test #305: itkImageReverseIteratorTest ................................................... Passed 0.06 sec Start 308: itkImageLinearIteratorTest 307/2822 Test #306: itkImageDuplicatorTest ........................................................ Passed 0.06 sec Start 309: itkImageRandomIteratorTest 308/2822 Test #307: itkImageIteratorsForwardBackwardTest .......................................... Passed 0.03 sec Start 310: itkImageRandomIteratorTest2 309/2822 Test #309: itkImageRandomIteratorTest .................................................... Passed 0.07 sec Start 311: itkImageRandomNonRepeatingIteratorWithIndexTest 310/2822 Test #308: itkImageLinearIteratorTest .................................................... Passed 0.10 sec Start 312: itkImageRandomNonRepeatingIteratorWithIndexTest2 311/2822 Test #300: itkImageIteratorWithIndexTest ................................................. Passed 0.28 sec Start 313: itkImageSliceIteratorTest 312/2822 Test #312: itkImageRandomNonRepeatingIteratorWithIndexTest2 .............................. Passed 0.05 sec Start 314: itkImageTest 313/2822 Test #310: itkImageRandomIteratorTest2 ................................................... Passed 0.13 sec Start 315: itkLightObjectTest 314/2822 Test #315: itkLightObjectTest ............................................................ Passed 0.03 sec Start 316: itkLineIteratorTest 315/2822 Test #314: itkImageTest .................................................................. Passed 0.05 sec Start 317: itkLoggerTest 316/2822 Test #316: itkLineIteratorTest ........................................................... Passed 0.04 sec Start 318: itkLoggerOutputTest 317/2822 Test #317: itkLoggerTest ................................................................. Passed 0.05 sec Start 319: itkLoggerManagerTest 318/2822 Test #318: itkLoggerOutputTest ........................................................... Passed 0.03 sec Start 320: itkLoggerThreadWrapperTest 319/2822 Test #313: itkImageSliceIteratorTest ..................................................... Passed 0.12 sec Start 321: itkMatrixTest 320/2822 Test #288: itkMathCastWithRangeCheckTest ................................................. Passed 0.57 sec Start 322: itkMapContainerTest 321/2822 Test #321: itkMatrixTest ................................................................. Passed 0.04 sec Start 323: itkIteratorTests 322/2822 Test #322: itkMapContainerTest ........................................................... Passed 0.03 sec Start 324: itkObjectFactoryTest 323/2822 Test #311: itkImageRandomNonRepeatingIteratorWithIndexTest ............................... Passed 0.26 sec Start 325: itkVectorTest 324/2822 Test #324: itkObjectFactoryTest .......................................................... Passed 0.04 sec Start 326: itkPointSetTest 325/2822 Test #325: itkVectorTest ................................................................. Passed 0.04 sec Start 327: itkBresenhamLineTest 326/2822 Test #323: itkIteratorTests .............................................................. Passed 0.07 sec Start 328: itkSparseFieldLayerTest 327/2822 Test #326: itkPointSetTest ............................................................... Passed 0.04 sec Start 329: itkDataObjectTest 328/2822 Test #327: itkBresenhamLineTest .......................................................... Passed 0.03 sec Start 330: itkAtanRegularizedHeavisideStepFunctionTest1 329/2822 Test #328: itkSparseFieldLayerTest ....................................................... Passed 0.03 sec Start 331: itkHashTableTest 330/2822 Test #329: itkDataObjectTest ............................................................. Passed 0.03 sec Start 332: itkHeavisideStepFunctionTest1 331/2822 Test #331: itkHashTableTest .............................................................. Passed 0.03 sec Start 333: itkSinRegularizedHeavisideStepFunctionTest1 332/2822 Test #330: itkAtanRegularizedHeavisideStepFunctionTest1 .................................. Passed 0.04 sec Start 334: itkPixelAccessTest 333/2822 Test #332: itkHeavisideStepFunctionTest1 ................................................. Passed 0.04 sec Start 335: itkPointGeometryTest 334/2822 Test #334: itkPixelAccessTest ............................................................ Passed 0.03 sec Start 336: itkStdStreamStateSaveTest 335/2822 Test #333: itkSinRegularizedHeavisideStepFunctionTest1 ................................... Passed 0.04 sec Start 337: itkMetaDataDictionaryTest 336/2822 Test #335: itkPointGeometryTest .......................................................... Passed 0.04 sec Start 338: itkMultiThreaderTest 337/2822 Test #336: itkStdStreamStateSaveTest ..................................................... Passed 0.04 sec Start 339: itkMultiThreaderEnvTest88 338/2822 Test #337: itkMetaDataDictionaryTest ..................................................... Passed 0.04 sec Start 340: itkMultiThreaderEnvTest43 339/2822 Test #338: itkMultiThreaderTest .......................................................... Passed 0.03 sec Start 341: itkMultiThreaderEnvTest123 340/2822 Test #339: itkMultiThreaderEnvTest88 ..................................................... Passed 0.04 sec Start 342: itkNeighborhoodAlgorithmTest 341/2822 Test #340: itkMultiThreaderEnvTest43 ..................................................... Passed 0.04 sec Start 343: itkNeighborhoodTest 342/2822 Test #341: itkMultiThreaderEnvTest123 .................................................... Passed 0.04 sec Start 344: itkNeighborhoodIteratorTest 343/2822 Test #343: itkNeighborhoodTest ........................................................... Passed 0.03 sec Start 345: itkNeighborhoodOperatorTest 344/2822 Test #342: itkNeighborhoodAlgorithmTest .................................................. Passed 0.03 sec Start 346: itkNumericsTest 345/2822 Test #319: itkLoggerManagerTest .......................................................... Passed 0.35 sec Start 347: itkNumericTraitsTest 346/2822 Test #344: itkNeighborhoodIteratorTest ................................................... Passed 0.04 sec Start 348: itkIntTypesTest 347/2822 Test #345: itkNeighborhoodOperatorTest ................................................... Passed 0.04 sec Start 349: itkOctreeTest 348/2822 Test #346: itkNumericsTest ............................................................... Passed 0.04 sec Start 350: itkNumberToStringTest 349/2822 Test #348: itkIntTypesTest ............................................................... Passed 0.04 sec Start 352: itkObjectFactoryTest3 350/2822 Test #347: itkNumericTraitsTest .......................................................... Passed 0.07 sec Start 353: itkPeriodicBoundaryConditionTest 351/2822 Test #349: itkOctreeTest ................................................................. Passed 0.05 sec Start 354: itkPhasedArray3DSpecialCoordinatesImageTest 352/2822 Test #350: itkNumberToStringTest ......................................................... Passed 0.05 sec Start 355: itkPriorityQueueTest 353/2822 Test #352: itkObjectFactoryTest3 ......................................................... Passed 0.04 sec Start 356: itkRealTimeClockTest 354/2822 Test #354: itkPhasedArray3DSpecialCoordinatesImageTest ................................... Passed 0.03 sec Start 357: itkRealTimeStampTest 355/2822 Test #355: itkPriorityQueueTest .......................................................... Passed 0.04 sec Start 358: itkRealTimeIntervalTest 356/2822 Test #353: itkPeriodicBoundaryConditionTest .............................................. Passed 0.05 sec Start 359: itkTimeProbeTest 357/2822 Test #356: itkRealTimeClockTest .......................................................... Passed 0.04 sec Start 360: itkTimeProbeTest2 358/2822 Test #359: itkTimeProbeTest .............................................................. Passed 0.04 sec Start 361: itkRGBPixelTest 359/2822 Test #357: itkRealTimeStampTest .......................................................... Passed 0.06 sec Start 362: itkSparseImageTest 360/2822 Test #358: itkRealTimeIntervalTest ....................................................... Passed 0.06 sec Start 363: itkSimpleFilterWatcherTest 361/2822 Test #360: itkTimeProbeTest2 ............................................................. Passed 0.04 sec Start 364: itkSizeTest 362/2822 Test #361: itkRGBPixelTest ............................................................... Passed 0.05 sec Start 365: itkSliceIteratorTest 363/2822 Test #362: itkSparseImageTest ............................................................ Passed 0.05 sec Start 366: itkSmartPointerTest 364/2822 Test #363: itkSimpleFilterWatcherTest .................................................... Passed 0.04 sec Start 367: itkSpatialFunctionTest 365/2822 Test #364: itkSizeTest ................................................................... Passed 0.04 sec Start 368: itkSTLContainerAdaptorTest 366/2822 Test #365: itkSliceIteratorTest .......................................................... Passed 0.04 sec Start 369: itkStdStreamLogOutputTest 367/2822 Test #366: itkSmartPointerTest ........................................................... Passed 0.04 sec Start 370: itkThreadLoggerTest 368/2822 Test #367: itkSpatialFunctionTest ........................................................ Passed 0.04 sec Start 371: itkThreadDefsTest 369/2822 Test #368: itkSTLContainerAdaptorTest .................................................... Passed 0.04 sec Start 372: itkTimeProbesTest 370/2822 Test #369: itkStdStreamLogOutputTest ..................................................... Passed 0.04 sec Start 373: itkTreeContainerTest 371/2822 Test #371: itkThreadDefsTest ............................................................. Passed 0.03 sec Start 374: itkTreeContainerTest2 372/2822 Test #373: itkTreeContainerTest .......................................................... Passed 0.03 sec Start 375: itkVersorTest 373/2822 Test #374: itkTreeContainerTest2 ......................................................... Passed 0.04 sec Start 376: itkConicShellInteriorExteriorSpatialFunctionTest 374/2822 Test #375: itkVersorTest ................................................................. Passed 0.03 sec Start 377: itkEllipsoidInteriorExteriorSpatialFunctionTest 375/2822 Test #376: itkConicShellInteriorExteriorSpatialFunctionTest .............................. Passed 0.03 sec Start 378: itkFrustumSpatialFunctionTest 376/2822 Test #378: itkFrustumSpatialFunctionTest ................................................. Passed 0.03 sec Start 379: itkSymmetricEllipsoidInteriorExteriorSpatialFunctionTest 377/2822 Test #377: itkEllipsoidInteriorExteriorSpatialFunctionTest ............................... Passed 0.04 sec Start 380: itkTorusInteriorExteriorSpatialFunctionTest 378/2822 Test #380: itkTorusInteriorExteriorSpatialFunctionTest ................................... Passed 0.03 sec Start 381: itkSymmetricSecondRankTensorImageReadTest 379/2822 Test #379: itkSymmetricEllipsoidInteriorExteriorSpatialFunctionTest ...................... Passed 0.05 sec Start 382: itkSymmetricSecondRankTensorImageWriteReadTest 380/2822 Test #381: itkSymmetricSecondRankTensorImageReadTest ..................................... Passed 0.04 sec Start 383: itkSymmetricSecondRankTensorTest 381/2822 Test #382: itkSymmetricSecondRankTensorImageWriteReadTest ................................ Passed 0.03 sec Start 384: itkSymmetricEigenAnalysisTest 382/2822 Test #384: itkSymmetricEigenAnalysisTest ................................................. Passed 0.03 sec Start 385: itkSTLThreadTest 383/2822 Test #383: itkSymmetricSecondRankTensorTest .............................................. Passed 0.09 sec Start 386: itkStreamingImageFilterTest 384/2822 Test #386: itkStreamingImageFilterTest ................................................... Passed 0.04 sec Start 387: itkStreamingImageFilterTest2 385/2822 Test #370: itkThreadLoggerTest ........................................................... Passed 0.34 sec Start 388: itkStreamingImageFilterTest3_1 386/2822 Test #385: itkSTLThreadTest .............................................................. Passed 0.11 sec Start 389: itkStreamingImageFilterTest3_2 387/2822 Test #387: itkStreamingImageFilterTest2 .................................................. Passed 0.04 sec Start 390: itkVariableLengthVectorTest 388/2822 Test #388: itkStreamingImageFilterTest3_1 ................................................ Passed 0.07 sec Start 391: itkVariableSizeMatrixTest 389/2822 Test #390: itkVariableLengthVectorTest ................................................... Passed 0.04 sec Start 392: itkVectorGeometryTest 390/2822 Test #391: itkVariableSizeMatrixTest ..................................................... Passed 0.04 sec Start 393: itkZeroFluxBoundaryConditionTest 391/2822 Test #392: itkVectorGeometryTest ......................................................... Passed 0.04 sec Start 394: itkConstantBoundaryConditionTest 392/2822 Test #393: itkZeroFluxBoundaryConditionTest .............................................. Passed 0.04 sec Start 395: itkVNLRoundProfileTest1 393/2822 Test #394: itkConstantBoundaryConditionTest .............................................. Passed 0.05 sec Start 396: itkMemoryProbesCollecterBaseTest 394/2822 Test #389: itkStreamingImageFilterTest3_2 ................................................ Passed 0.19 sec Start 397: itkImageAlgorithmCopyTest 395/2822 Test #396: itkMemoryProbesCollecterBaseTest .............................................. Passed 0.06 sec Start 398: itkImageAlgorithmCopyTest2 396/2822 Test #397: itkImageAlgorithmCopyTest ..................................................... Passed 0.18 sec Start 399: itkOptimizerParametersTest 397/2822 Test #398: itkImageAlgorithmCopyTest2 .................................................... Passed 0.14 sec Start 400: itkImageVectorOptimizerParametersHelperTest 398/2822 Test #400: itkImageVectorOptimizerParametersHelperTest ................................... Passed 0.04 sec Start 401: itkCompensatedSummationTest 399/2822 Test #399: itkOptimizerParametersTest .................................................... Passed 0.05 sec Start 402: itkCompensatedSummationTest2 400/2822 Test #402: itkCompensatedSummationTest2 .................................................. Passed 0.06 sec Start 403: itkFloatingPointExceptionsTest1 401/2822 Test #403: itkFloatingPointExceptionsTest1 ............................................... Passed 0.04 sec Start 404: itkFloatingPointExceptionsTest2 402/2822 Test #404: itkFloatingPointExceptionsTest2 ............................................... Passed 0.03 sec Start 405: itkFloatingPointExceptionsTest3 403/2822 Test #405: itkFloatingPointExceptionsTest3 ............................................... Passed 0.04 sec Start 406: itkFloatingPointExceptionsTest4 404/2822 Test #406: itkFloatingPointExceptionsTest4 ............................................... Passed 0.04 sec Start 407: itkFloatingPointExceptionsTest5 405/2822 Test #372: itkTimeProbesTest ............................................................. Passed 1.01 sec Start 408: itkCMakeConfigurationTest 406/2822 Test #407: itkFloatingPointExceptionsTest5 ............................................... Passed 0.05 sec Start 409: itkDataObjectAndProcessObjectTest 407/2822 Test #408: itkCMakeConfigurationTest ..................................................... Passed 0.02 sec Start 410: itkImageRegionConstIteratorWithOnlyIndexTest 408/2822 Test #409: itkDataObjectAndProcessObjectTest ............................................. Passed 0.06 sec Start 411: itkImageRandomConstIteratorWithOnlyIndexTest 409/2822 Test #411: itkImageRandomConstIteratorWithOnlyIndexTest .................................. Passed 0.07 sec Start 412: itkConstNeighborhoodIteratorWithOnlyIndexTest 410/2822 Test #410: itkImageRegionConstIteratorWithOnlyIndexTest .................................. Passed 0.14 sec Start 413: itkImageToImageToleranceTest 411/2822 Test #412: itkConstNeighborhoodIteratorWithOnlyIndexTest ................................. Passed 0.04 sec Start 414: itkRegionSplitterSlowDimensionTest 412/2822 Test #413: itkImageToImageToleranceTest .................................................. Passed 0.04 sec Start 415: itkRegionSplitterDirectionTest 413/2822 Test #414: itkRegionSplitterSlowDimensionTest ............................................ Passed 0.04 sec Start 416: itkRegionSplitterMultidimensionalTest 414/2822 Test #415: itkRegionSplitterDirectionTest ................................................ Passed 0.04 sec Start 417: itkSimpleFastMutexLockTest 415/2822 Test #416: itkRegionSplitterMultidimensionalTest ......................................... Passed 0.04 sec Start 418: itkMetaDataObjectTest 416/2822 Test #417: itkSimpleFastMutexLockTest .................................................... Passed 0.04 sec Start 419: itkThreadPoolTest 417/2822 Test #418: itkMetaDataObjectTest ......................................................... Passed 0.04 sec Start 420: itkSpawnThreadTest 418/2822 Test #420: itkSpawnThreadTest ............................................................ Passed 0.04 sec Start 421: itkAtomicIntTest 419/2822 Test #419: itkThreadPoolTest ............................................................. Passed 0.13 sec Start 422: itkDownCastTest 420/2822 Test #422: itkDownCastTest ............................................................... Passed 0.07 sec Start 423: itkMetaDataDictionaryPythonTest 421/2822 Test #401: itkCompensatedSummationTest ................................................... Passed 0.89 sec Start 424: itkDirectoryPythonTest 422/2822 Test #421: itkAtomicIntTest .............................................................. Passed 0.47 sec Start 425: itkObjectPythonTest 423/2822 Test #395: itkVNLRoundProfileTest1 ....................................................... Passed 1.36 sec Start 426: itkIndexOffsetPythonTest 424/2822 Test #33: vnl_basic_operation_timings ................................................... Passed 6.04 sec Start 427: itkRelabelComponentImageFilterTest 425/2822 Test #427: itkRelabelComponentImageFilterTest ............................................ Passed 0.12 sec Start 428: itkHardConnectedComponentImageFilterTest 426/2822 Test #428: itkHardConnectedComponentImageFilterTest ...................................... Passed 0.04 sec Start 429: itkConnectedComponentImageFilterTestRGB 427/2822 Test #275: itkTimeStampTest .............................................................. Passed 3.56 sec Start 430: itkConnectedComponentImageFilterTest 428/2822 Test #429: itkConnectedComponentImageFilterTestRGB ....................................... Passed 0.07 sec Start 431: itkConnectedComponentImageFilterTest2 429/2822 Test #430: itkConnectedComponentImageFilterTest .......................................... Passed 0.07 sec Start 432: itkConnectedComponentImageFilterTest3 430/2822 Test #432: itkConnectedComponentImageFilterTest3 ......................................... Passed 0.07 sec Start 433: itkConnectedComponentImageFilterBackgroundTest1 431/2822 Test #431: itkConnectedComponentImageFilterTest2 ......................................... Passed 0.08 sec Start 434: itkConnectedComponentImageFilterBackgroundTest2 432/2822 Test #434: itkConnectedComponentImageFilterBackgroundTest2 ............................... Passed 0.05 sec Start 435: itkThresholdMaximumConnectedComponentsImageFilterTest1 433/2822 Test #433: itkConnectedComponentImageFilterBackgroundTest1 ............................... Passed 0.06 sec Start 436: itkThresholdMaximumConnectedComponentsImageFilterTest2 434/2822 Test #435: itkThresholdMaximumConnectedComponentsImageFilterTest1 ........................ Passed 0.17 sec Start 437: itkScalarConnectedComponentImageFilterTest 435/2822 Test #436: itkThresholdMaximumConnectedComponentsImageFilterTest2 ........................ Passed 0.16 sec Start 438: itkVectorConnectedComponentImageFilterTest 436/2822 Test #438: itkVectorConnectedComponentImageFilterTest .................................... Passed 0.05 sec Start 439: itkConnectedComponentImageFilterTooManyObjectsTest 437/2822 Test #437: itkScalarConnectedComponentImageFilterTest .................................... Passed 0.07 sec Start 440: itkMaskConnectedComponentImageFilterTest 438/2822 Test #439: itkConnectedComponentImageFilterTooManyObjectsTest ............................ Passed 0.05 sec Start 441: ITKFFTInDoxygenGroup 439/2822 Test #440: itkMaskConnectedComponentImageFilterTest ...................................... Passed 0.05 sec Start 442: ITKConvolutionInDoxygenGroup 440/2822 Test #441: ITKFFTInDoxygenGroup .......................................................... Passed 0.02 sec Start 443: itkConvolutionImageFilterTestSobelX 441/2822 Test #442: ITKConvolutionInDoxygenGroup .................................................. Passed 0.02 sec Start 444: itkConvolutionImageFilterTestSobelY 442/2822 Test #443: itkConvolutionImageFilterTestSobelX ........................................... Passed 0.09 sec Start 445: itkConvolutionImageFilterTest4x4Mean 443/2822 Test #444: itkConvolutionImageFilterTestSobelY ........................................... Passed 0.08 sec Start 446: itkConvolutionImageFilterTest4x5Mean 444/2822 Test #445: itkConvolutionImageFilterTest4x4Mean .......................................... Passed 0.09 sec Start 447: itkConvolutionImageFilterTest5x5Mean 445/2822 Test #446: itkConvolutionImageFilterTest4x5Mean .......................................... Passed 0.10 sec Start 448: itkConvolutionImageFilterTest4x4MeanValidRegion 446/2822 Test #447: itkConvolutionImageFilterTest5x5Mean .......................................... Passed 0.07 sec Start 449: itkConvolutionImageFilterTest4x5MeanValidRegion 447/2822 Test #448: itkConvolutionImageFilterTest4x4MeanValidRegion ............................... Passed 0.10 sec Start 450: itkConvolutionImageFilterTest5x5MeanValidRegion 448/2822 Test #449: itkConvolutionImageFilterTest4x5MeanValidRegion ............................... Passed 0.07 sec Start 451: itkConvolutionImageFilterDeltaFunctionTest 449/2822 Test #450: itkConvolutionImageFilterTest5x5MeanValidRegion ............................... Passed 0.10 sec Start 452: itkFFTConvolutionImageFilterTestSobelX 450/2822 Test #451: itkConvolutionImageFilterDeltaFunctionTest .................................... Passed 0.07 sec Start 453: itkFFTConvolutionImageFilterTestSobelY 451/2822 Test #453: itkFFTConvolutionImageFilterTestSobelY ........................................ Passed 0.14 sec Start 454: itkFFTConvolutionImageFilterTestSobelYPeriodic 452/2822 Test #452: itkFFTConvolutionImageFilterTestSobelX ........................................ Passed 0.16 sec Start 455: itkFFTConvolutionImageFilterTestSobelXConstant 453/2822 Test #454: itkFFTConvolutionImageFilterTestSobelYPeriodic ................................ Passed 0.10 sec Start 456: itkFFTConvolutionImageFilterTestSobelXZeroFluxNeumann 454/2822 Test #455: itkFFTConvolutionImageFilterTestSobelXConstant ................................ Passed 0.14 sec Start 457: itkFFTConvolutionImageFilterTest4x4Mean 455/2822 Test #456: itkFFTConvolutionImageFilterTestSobelXZeroFluxNeumann ......................... Passed 0.11 sec Start 458: itkFFTConvolutionImageFilterTest4x5Mean 456/2822 Test #458: itkFFTConvolutionImageFilterTest4x5Mean ....................................... Passed 0.13 sec Start 459: itkFFTConvolutionImageFilterTest5x5Mean 457/2822 Test #457: itkFFTConvolutionImageFilterTest4x4Mean ....................................... Passed 0.19 sec Start 460: itkFFTConvolutionImageFilterTest4x4MeanValidRegion 458/2822 Test #459: itkFFTConvolutionImageFilterTest5x5Mean ....................................... Passed 0.19 sec Start 461: itkFFTConvolutionImageFilterTest4x5MeanValidRegion 459/2822 Test #460: itkFFTConvolutionImageFilterTest4x4MeanValidRegion ............................ Passed 0.19 sec Start 462: itkFFTConvolutionImageFilterTest5x5MeanValidRegion 460/2822 Test #462: itkFFTConvolutionImageFilterTest5x5MeanValidRegion ............................ Passed 0.17 sec Start 463: itkFFTConvolutionImageFilterDeltaFunctionTest 461/2822 Test #461: itkFFTConvolutionImageFilterTest4x5MeanValidRegion ............................ Passed 0.19 sec Start 464: itkNormalizedCorrelationImageFilterTest 462/2822 Test #464: itkNormalizedCorrelationImageFilterTest ....................................... Passed 0.07 sec Start 465: itkMaskedFFTNormalizedCorrelationImageFilterTest1 463/2822 Test #463: itkFFTConvolutionImageFilterDeltaFunctionTest ................................. Passed 0.09 sec Start 466: itkMaskedFFTNormalizedCorrelationImageFilterTest2 464/2822 Test #466: itkMaskedFFTNormalizedCorrelationImageFilterTest2 ............................. Passed 0.17 sec Start 467: itkMaskedFFTNormalizedCorrelationImageFilterTest3 465/2822 Test #465: itkMaskedFFTNormalizedCorrelationImageFilterTest1 ............................. Passed 0.18 sec Start 468: itkMaskedFFTNormalizedCorrelationImageFilterTest4 466/2822 Test #467: itkMaskedFFTNormalizedCorrelationImageFilterTest3 ............................. Passed 0.22 sec Start 469: itkMaskedFFTNormalizedCorrelationImageFilterTest5 467/2822 Test #320: itkLoggerThreadWrapperTest .................................................... Passed 5.06 sec Start 470: itkMaskedFFTNormalizedCorrelationImageFilterTest6 468/2822 Test #468: itkMaskedFFTNormalizedCorrelationImageFilterTest4 ............................. Passed 0.45 sec Start 471: itkFFTNormalizedCorrelationImageFilterTest1 469/2822 Test #469: itkMaskedFFTNormalizedCorrelationImageFilterTest5 ............................. Passed 0.27 sec Start 472: itkFFTNormalizedCorrelationImageFilterTest2 470/2822 Test #470: itkMaskedFFTNormalizedCorrelationImageFilterTest6 ............................. Passed 0.27 sec Start 473: itkFFTNormalizedCorrelationImageFilterTest3 471/2822 Test #472: itkFFTNormalizedCorrelationImageFilterTest2 ................................... Passed 0.18 sec Start 474: itkFFTNormalizedCorrelationImageFilterTest4 472/2822 Test #471: itkFFTNormalizedCorrelationImageFilterTest1 ................................... Passed 0.22 sec Start 475: itkFFTNormalizedCorrelationImageFilterTest5 473/2822 Test #473: itkFFTNormalizedCorrelationImageFilterTest3 ................................... Passed 0.29 sec Start 476: itkBinaryMinMaxCurvatureFlowImageFilterTest 474/2822 Test #475: itkFFTNormalizedCorrelationImageFilterTest5 ................................... Passed 0.32 sec Start 477: itkCurvatureFlowTesti 475/2822 Test #477: itkCurvatureFlowTesti ......................................................... Passed 0.11 sec Start 478: ITKDeconvolutionInDoxygenGroup 476/2822 Test #478: ITKDeconvolutionInDoxygenGroup ................................................ Passed 0.01 sec Start 479: itkRichardsonLucyDeconvolutionImageFilterGaussianKernelTest 477/2822 Test #474: itkFFTNormalizedCorrelationImageFilterTest4 ................................... Passed 0.51 sec Start 480: itkRichardsonLucyDeconvolutionImageFilterIrregularKernelTest 478/2822 Test #479: itkRichardsonLucyDeconvolutionImageFilterGaussianKernelTest ................... Passed 0.27 sec Start 481: itkRichardsonLucyDeconvolutionImageFilterNonNullImageOriginTest 479/2822 Test #480: itkRichardsonLucyDeconvolutionImageFilterIrregularKernelTest .................. Passed 0.23 sec Start 482: itkLandweberDeconvolutionImageFilterGaussianKernelTest 480/2822 Test #482: itkLandweberDeconvolutionImageFilterGaussianKernelTest ........................ Passed 0.21 sec Start 483: itkLandweberDeconvolutionImageFilterIrregularKernelTest 481/2822 Test #481: itkRichardsonLucyDeconvolutionImageFilterNonNullImageOriginTest ............... Passed 0.24 sec Start 484: itkProjectedIterativeDeconvolutionimageFilterTest 482/2822 Test #484: itkProjectedIterativeDeconvolutionimageFilterTest ............................. Passed 0.05 sec Start 485: itkProjectedLandweberDeconvolutionImageFilterGaussianKernelTest 483/2822 Test #483: itkLandweberDeconvolutionImageFilterIrregularKernelTest ....................... Passed 0.15 sec Start 486: itkProjectedLandweberDeconvolutionImageFilterIrregularKernelTest 484/2822 Test #485: itkProjectedLandweberDeconvolutionImageFilterGaussianKernelTest ............... Passed 0.18 sec Start 487: itkInverseDeconvolutionImageFilterGaussianKernelTest 485/2822 Test #476: itkBinaryMinMaxCurvatureFlowImageFilterTest ................................... Passed 1.02 sec Start 488: itkInverseDeconvolutionImageFilterIrregularKernelTest 486/2822 Test #488: itkInverseDeconvolutionImageFilterIrregularKernelTest ......................... Passed 0.17 sec Start 489: itkTikhonovDeconvolutionImageFilterGaussianKernelTest 487/2822 Test #486: itkProjectedLandweberDeconvolutionImageFilterIrregularKernelTest .............. Passed 0.28 sec Start 490: itkTikhonovDeconvolutionImageFilterIrregularKernelTest 488/2822 Test #487: itkInverseDeconvolutionImageFilterGaussianKernelTest .......................... Passed 0.20 sec Start 491: itkWienerDeconvolutionImageFilterGaussianKernelTest 489/2822 Test #423: itkMetaDataDictionaryPythonTest ............................................... Passed 4.76 sec Start 492: itkWienerDeconvolutionImageFilterIrregularKernelTest 490/2822 Test #426: itkIndexOffsetPythonTest ...................................................... Passed 4.44 sec Start 493: itkParametricBlindLeastSquaresDeconvolutionImageFilterTest 491/2822 Test #424: itkDirectoryPythonTest ........................................................ Passed 4.65 sec Start 494: ITKDeformableMeshInDoxygenGroup 492/2822 Test #494: ITKDeformableMeshInDoxygenGroup ............................................... Passed 0.02 sec Start 495: itkDeformableSimplexMesh3DFilterTest 493/2822 Test #425: itkObjectPythonTest ........................................................... Passed 4.50 sec Start 496: itkDeformableSimplexMesh3DBalloonForceFilterTest 494/2822 Test #489: itkTikhonovDeconvolutionImageFilterGaussianKernelTest ......................... Passed 0.17 sec Start 497: itkDeformableSimplexMesh3DGradientConstaintForceFilterTest 495/2822 Test #490: itkTikhonovDeconvolutionImageFilterIrregularKernelTest ........................ Passed 0.18 sec Start 498: itkSimplexMeshWithFloatCoordRepTest 496/2822 Test #498: itkSimplexMeshWithFloatCoordRepTest ........................................... Passed 0.04 sec Start 499: ITKDenoisingInDoxygenGroup 497/2822 Test #491: itkWienerDeconvolutionImageFilterGaussianKernelTest ........................... Passed 0.21 sec Start 500: itkPatchBasedDenoisingImageFilterDefaultTest 498/2822 Test #499: ITKDenoisingInDoxygenGroup .................................................... Passed 0.03 sec Start 501: itkPatchBasedDenoisingImageFilterTest0 499/2822 Test #492: itkWienerDeconvolutionImageFilterIrregularKernelTest .......................... Passed 0.18 sec Start 502: itkPatchBasedDenoisingImageFilterTestGaussian 500/2822 Test #496: itkDeformableSimplexMesh3DBalloonForceFilterTest .............................. Passed 0.12 sec Start 503: itkPatchBasedDenoisingImageFilterTestRician 501/2822 Test #497: itkDeformableSimplexMesh3DGradientConstaintForceFilterTest .................... Passed 0.11 sec Start 504: itkPatchBasedDenoisingImageFilterTestPoisson 502/2822 Test #495: itkDeformableSimplexMesh3DFilterTest .......................................... Passed 0.35 sec Start 505: itkPatchBasedDenoisingImageFilterTestTensors 503/2822 Test #221: itkScalarImageKmeansImageFilter3DTest ......................................... Passed 9.00 sec Start 506: ITKDisplacementFieldInDoxygenGroup 504/2822 Test #506: ITKDisplacementFieldInDoxygenGroup ............................................ Passed 0.05 sec Start 507: ITKV3CompatibilityInDoxygenGroup 505/2822 Test #507: ITKV3CompatibilityInDoxygenGroup .............................................. Passed 0.07 sec Start 508: ITKDeprecatedInDoxygenGroup 506/2822 Test #508: ITKDeprecatedInDoxygenGroup ................................................... Passed 0.09 sec Start 509: ITKIOBioRadInDoxygenGroup 507/2822 Test #493: itkParametricBlindLeastSquaresDeconvolutionImageFilterTest .................... Passed 0.74 sec Start 510: ITKIOLSMInDoxygenGroup 508/2822 Test #509: ITKIOBioRadInDoxygenGroup ..................................................... Passed 0.06 sec Start 511: ITKIOStimulateInDoxygenGroup 509/2822 Test #510: ITKIOLSMInDoxygenGroup ........................................................ Passed 0.05 sec Start 512: ITKRegistrationCommonInDoxygenGroup 510/2822 Test #511: ITKIOStimulateInDoxygenGroup .................................................. Passed 0.06 sec Start 513: itk2DDeformableTest 511/2822 Test #512: ITKRegistrationCommonInDoxygenGroup ........................................... Passed 0.08 sec Start 514: itkDeformableTest 512/2822 Test #513: itk2DDeformableTest ........................................................... Passed 0.21 sec Start 515: itkNonThreadedShrinkImageTest 513/2822 Test #515: itkNonThreadedShrinkImageTest ................................................. Passed 0.06 sec Start 516: itkNonUniformBSplineTest 514/2822 Test #514: itkDeformableTest ............................................................. Passed 0.32 sec Start 517: itkReflectImageFilterTest 515/2822 Test #516: itkNonUniformBSplineTest ...................................................... Passed 0.14 sec Start 518: itkShiftScaleInPlaceImageFilterTest 516/2822 Test #517: itkReflectImageFilterTest ..................................................... Passed 0.11 sec Start 519: itkTwoOutputExampleImageFilterTest 517/2822 Test #519: itkTwoOutputExampleImageFilterTest ............................................ Passed 0.14 sec Start 520: itkDeprecatedStreamingImageFilterTest 518/2822 Test #518: itkShiftScaleInPlaceImageFilterTest ........................................... Passed 0.23 sec Start 521: itkDeprecatedStreamingImageFilterTest2 519/2822 Test #520: itkDeprecatedStreamingImageFilterTest ......................................... Passed 0.15 sec Start 522: itkDeprecatedStreamingImageFilterTest3_1 520/2822 Test #522: itkDeprecatedStreamingImageFilterTest3_1 ...................................... Passed 0.25 sec Start 523: itkDeprecatedStreamingImageFilterTest3_2 521/2822 Test #521: itkDeprecatedStreamingImageFilterTest2 ........................................ Passed 0.43 sec Start 524: itkTransformToDisplacementFieldSourceTest01 522/2822 Test #524: itkTransformToDisplacementFieldSourceTest01 ................................... Passed 0.11 sec Start 525: itkTransformToDisplacementFieldSourceTest02 523/2822 Test #525: itkTransformToDisplacementFieldSourceTest02 ................................... Passed 0.10 sec Start 526: itkTransformToDisplacementFieldSourceTest03 524/2822 Test #526: itkTransformToDisplacementFieldSourceTest03 ................................... Passed 0.19 sec Start 527: itkSymmetricEigenSystemTest 525/2822 Test #527: itkSymmetricEigenSystemTest ................................................... Passed 0.10 sec Start 528: itkAnalyzeIOBigEndianCompressed.hdr 526/2822 Test #528: itkAnalyzeIOBigEndianCompressed.hdr ........................................... Passed 0.10 sec Start 529: itkAnalyzeIOBigEndianCompressed.img 527/2822 Test #529: itkAnalyzeIOBigEndianCompressed.img ........................................... Passed 0.10 sec Start 530: itkAnalyzeIOBigEndianCompressed.img.gz 528/2822 Test #530: itkAnalyzeIOBigEndianCompressed.img.gz ........................................ Passed 0.06 sec Start 531: itkAnalyzeIOBigEndian 529/2822 Test #501: itkPatchBasedDenoisingImageFilterTest0 ........................................ Passed 2.52 sec Start 532: itkAnalyzeIOLittleEndianCompressed 530/2822 Test #504: itkPatchBasedDenoisingImageFilterTestPoisson .................................. Passed 2.52 sec Start 533: itkAnalyzeIOLittleEndian 531/2822 Test #531: itkAnalyzeIOBigEndian ......................................................... Passed 0.11 sec Start 534: itkAnalyzeIOInternalTests 532/2822 Test #532: itkAnalyzeIOLittleEndianCompressed ............................................ Passed 0.09 sec Start 535: itkAnalyzeIOShouldFail 533/2822 Test #533: itkAnalyzeIOLittleEndian ...................................................... Passed 0.08 sec Start 536: itkAnalyzeIOShouldSucceed 534/2822 Test #534: itkAnalyzeIOInternalTests ..................................................... Passed 0.06 sec Start 537: itkAnalyzeIOShouldSucceedZ 535/2822 Test #537: itkAnalyzeIOShouldSucceedZ .................................................... Passed 0.05 sec Start 538: itkAnalyzeImageIODirectionsTest 536/2822 Test #535: itkAnalyzeIOShouldFail ........................................................ Passed 0.12 sec Start 539: itkAnalyzeImageIOBadHeader 537/2822 Test #536: itkAnalyzeIOShouldSucceed ..................................................... Passed 0.11 sec Start 540: itkAnalyzeImageIORGBImageTest 538/2822 Test #538: itkAnalyzeImageIODirectionsTest ............................................... Passed 0.08 sec Start 541: itkDICOMImageSeriesTest 539/2822 Test #539: itkAnalyzeImageIOBadHeader .................................................... Passed 0.07 sec Start 542: itkDICOMImageSeriesTest2 540/2822 Test #540: itkAnalyzeImageIORGBImageTest ................................................. Passed 0.07 sec Start 543: itkDICOMSeriesFileNamesTest 541/2822 Test #503: itkPatchBasedDenoisingImageFilterTestRician ................................... Passed 2.84 sec Start 544: itkDicomDifficultFile 542/2822 Test #542: itkDICOMImageSeriesTest2 ...................................................... Passed 0.06 sec Start 545: itkDicomImageIODirection2DTest 543/2822 Test #541: itkDICOMImageSeriesTest ....................................................... Passed 0.07 sec Start 546: itkImageReadDICOMSeriesWriteTest 544/2822 Test #543: itkDICOMSeriesFileNamesTest ................................................... Passed 0.05 sec Start 547: itkImageReadDICOMSeriesWriteWithDirection002Test 545/2822 Test #502: itkPatchBasedDenoisingImageFilterTestGaussian ................................. Passed 2.88 sec Start 548: itkDeprecatedPrintTest 546/2822 Test #548: itkDeprecatedPrintTest ........................................................ Passed 0.04 sec Start 549: ITKDiffusionTensorImageInDoxygenGroup 547/2822 Test #545: itkDicomImageIODirection2DTest ................................................ Passed 0.07 sec Start 550: itkDiffusionTensor3DTest 548/2822 Test #549: ITKDiffusionTensorImageInDoxygenGroup ......................................... Passed 0.02 sec Start 551: itkDiffusionTensor3DReconstructionImageFilterTest 549/2822 Test #544: itkDicomDifficultFile ......................................................... Passed 0.09 sec Start 552: itkTensorRelativeAnisotropyImageFilterTest 550/2822 Test #546: itkImageReadDICOMSeriesWriteTest .............................................. Passed 0.09 sec Start 553: itkTensorFractionalAnisotropyImageFilterTest 551/2822 Test #547: itkImageReadDICOMSeriesWriteWithDirection002Test .............................. Passed 0.09 sec Start 554: itkComposeDisplacementFieldsImageFilterTest 552/2822 Test #551: itkDiffusionTensor3DReconstructionImageFilterTest ............................. Passed 0.06 sec Start 555: itkDisplacementFieldJacobianDeterminantFilterTest 553/2822 Test #554: itkComposeDisplacementFieldsImageFilterTest ................................... Passed 0.06 sec Start 556: itkIterativeInverseDisplacementFieldImageFilterTest 554/2822 Test #523: itkDeprecatedStreamingImageFilterTest3_2 ...................................... Passed 1.34 sec Start 557: itkLandmarkDisplacementFieldSourceTest 555/2822 Test #552: itkTensorRelativeAnisotropyImageFilterTest .................................... Passed 0.08 sec Start 558: itkInverseDisplacementFieldImageFilterTest 556/2822 Test #553: itkTensorFractionalAnisotropyImageFilterTest .................................. Passed 0.08 sec Start 559: itkDisplacementFieldTransformTest 557/2822 Test #550: itkDiffusionTensor3DTest ...................................................... Passed 0.11 sec Start 560: itkGaussianSmoothingOnUpdateDisplacementFieldTransformTest 558/2822 Test #559: itkDisplacementFieldTransformTest ............................................. Passed 0.05 sec Start 561: itkBSplineSmoothingOnUpdateDisplacementFieldTransformTest 559/2822 Test #557: itkLandmarkDisplacementFieldSourceTest ........................................ Passed 0.07 sec Start 562: itkGaussianExponentialDiffeomorphicTransformTest 560/2822 Test #556: itkIterativeInverseDisplacementFieldImageFilterTest ........................... Passed 0.08 sec Start 563: itkBSplineExponentialDiffeomorphicTransformTest 561/2822 Test #500: itkPatchBasedDenoisingImageFilterDefaultTest .................................. Passed 3.13 sec Start 564: itkTimeVaryingVelocityFieldTransformTest 562/2822 Test #560: itkGaussianSmoothingOnUpdateDisplacementFieldTransformTest .................... Passed 0.08 sec Start 565: itkTimeVaryingVelocityFieldIntegrationImageFilterTest 563/2822 Test #558: itkInverseDisplacementFieldImageFilterTest .................................... Passed 0.11 sec Start 566: itkTimeVaryingBSplineVelocityFieldTransformTest 564/2822 Test #561: itkBSplineSmoothingOnUpdateDisplacementFieldTransformTest ..................... Passed 0.16 sec Start 567: itkInvertDisplacementFieldImageFilterTest 565/2822 Test #562: itkGaussianExponentialDiffeomorphicTransformTest .............................. Passed 0.32 sec Start 568: itkDisplacementFieldToBSplineImageFilterTest 566/2822 Test #565: itkTimeVaryingVelocityFieldIntegrationImageFilterTest ......................... Passed 0.40 sec Start 569: itkTransformToDisplacementFieldFilterTest01 567/2822 Test #563: itkBSplineExponentialDiffeomorphicTransformTest ............................... Passed 0.48 sec Start 570: itkTransformToDisplacementFieldFilterTest02 568/2822 Test #569: itkTransformToDisplacementFieldFilterTest01 ................................... Passed 0.16 sec Start 571: itkTransformToDisplacementFieldFilterTest03 569/2822 Test #567: itkInvertDisplacementFieldImageFilterTest ..................................... Passed 0.53 sec Start 572: itkDisplacementFieldTransformCloneTest 570/2822 Test #570: itkTransformToDisplacementFieldFilterTest02 ................................... Passed 0.21 sec Start 573: itkExponentialDisplacementFieldImageFilterTest 571/2822 Test #564: itkTimeVaryingVelocityFieldTransformTest ...................................... Passed 0.70 sec Start 574: itkSignedMaurerDistanceMapImageFilterTest11 572/2822 Test #571: itkTransformToDisplacementFieldFilterTest03 ................................... Passed 0.17 sec Start 575: itkSignedDanielssonDistanceMapImageFilterTest11 573/2822 Test #572: itkDisplacementFieldTransformCloneTest ........................................ Passed 0.11 sec Start 576: itkDanielssonDistanceMapImageFilterTest 574/2822 Test #573: itkExponentialDisplacementFieldImageFilterTest ................................ Passed 0.12 sec Start 577: itkDanielssonDistanceMapImageFilterTest1 575/2822 Test #575: itkSignedDanielssonDistanceMapImageFilterTest11 ............................... Passed 0.10 sec Start 578: itkDanielssonDistanceMapImageFilterTest2 576/2822 Test #577: itkDanielssonDistanceMapImageFilterTest1 ...................................... Passed 0.09 sec Start 579: itkSignedDanielssonDistanceMapImageFilterTest 577/2822 Test #568: itkDisplacementFieldToBSplineImageFilterTest .................................. Passed 0.59 sec Start 580: itkSignedDanielssonDistanceMapImageFilterTest1 578/2822 Test #578: itkDanielssonDistanceMapImageFilterTest2 ...................................... Passed 0.05 sec Start 581: itkSignedDanielssonDistanceMapImageFilterTest2 579/2822 Test #574: itkSignedMaurerDistanceMapImageFilterTest11 ................................... Passed 0.21 sec Start 582: itkSignedDanielssonDistanceMapImageFilterTest3D 580/2822 Test #579: itkSignedDanielssonDistanceMapImageFilterTest ................................. Passed 0.05 sec Start 583: itkSignedDanielssonDistanceMapImageFilterTest4D 581/2822 Test #581: itkSignedDanielssonDistanceMapImageFilterTest2 ................................ Passed 0.06 sec Start 584: itkContourMeanDistanceImageFilterTest 582/2822 Test #580: itkSignedDanielssonDistanceMapImageFilterTest1 ................................ Passed 0.12 sec Start 585: itkContourDirectedMeanDistanceImageFilterTest 583/2822 Test #582: itkSignedDanielssonDistanceMapImageFilterTest3D ............................... Passed 0.12 sec Start 586: itkFastChamferDistanceImageFilterTest1 584/2822 Test #586: itkFastChamferDistanceImageFilterTest1 ........................................ Passed 0.12 sec Start 587: itkFastChamferDistanceImageFilterTest2 585/2822 Test #587: itkFastChamferDistanceImageFilterTest2 ........................................ Passed 0.10 sec Start 588: itkFastChamferDistanceImageFilterTest3 586/2822 Test #555: itkDisplacementFieldJacobianDeterminantFilterTest ............................. Passed 1.49 sec Start 589: itkFastChamferDistanceImageFilterTest4 587/2822 Test #588: itkFastChamferDistanceImageFilterTest3 ........................................ Passed 0.16 sec Start 590: itkHausdorffDistanceImageFilterTest 588/2822 Test #585: itkContourDirectedMeanDistanceImageFilterTest ................................. Passed 0.42 sec Start 591: itkReflectiveImageRegionIteratorTest 589/2822 Test #591: itkReflectiveImageRegionIteratorTest .......................................... Passed 0.04 sec Start 592: itkSignedMaurerDistanceMapImageFilterTest1 590/2822 Test #584: itkContourMeanDistanceImageFilterTest ......................................... Passed 0.54 sec Start 593: itkSignedMaurerDistanceMapImageFilterTest2 591/2822 Test #592: itkSignedMaurerDistanceMapImageFilterTest1 .................................... Passed 0.10 sec Start 594: itkSignedMaurerDistanceMapImageFilterTest3 592/2822 Test #593: itkSignedMaurerDistanceMapImageFilterTest2 .................................... Passed 0.14 sec Start 595: itkSignedMaurerDistanceMapImageFilterTest3D 593/2822 Test #594: itkSignedMaurerDistanceMapImageFilterTest3 .................................... Passed 0.17 sec Start 596: itkSignedMaurerDistanceMapImageFilterTest4D 594/2822 Test #595: itkSignedMaurerDistanceMapImageFilterTest3D ................................... Passed 0.13 sec Start 597: itkApproximateSignedDistanceMapImageFilterTest0 595/2822 Test #597: itkApproximateSignedDistanceMapImageFilterTest0 ............................... Passed 0.12 sec Start 598: itkApproximateSignedDistanceMapImageFilterTest1 596/2822 Test #583: itkSignedDanielssonDistanceMapImageFilterTest4D ............................... Passed 1.03 sec Start 599: itkIsoContourDistanceImageFilterTest 597/2822 Test #598: itkApproximateSignedDistanceMapImageFilterTest1 ............................... Passed 0.08 sec Start 600: ITKEigenInDoxygenGroup 598/2822 Test #600: ITKEigenInDoxygenGroup ........................................................ Passed 0.02 sec Start 601: itkEigenAnalysis2DImageFilterTest 599/2822 Test #596: itkSignedMaurerDistanceMapImageFilterTest4D ................................... Passed 0.28 sec Start 602: ITKIOXMLInDoxygenGroup 600/2822 Test #599: itkIsoContourDistanceImageFilterTest .......................................... Passed 0.10 sec Start 603: ITKIOSpatialObjectsInDoxygenGroup 601/2822 Test #601: itkEigenAnalysis2DImageFilterTest ............................................. Passed 0.10 sec Start 604: ITKFEMInDoxygenGroup 602/2822 Test #602: ITKIOXMLInDoxygenGroup ........................................................ Passed 0.10 sec Start 605: itkFEMElement2DMembraneTest 603/2822 Test #590: itkHausdorffDistanceImageFilterTest ........................................... Passed 0.73 sec Start 606: itkFEMElement2DQuadraticTriangularTest 604/2822 Test #603: ITKIOSpatialObjectsInDoxygenGroup ............................................. Passed 0.08 sec Start 607: itkFEMElement2DStrainTest 605/2822 Test #604: ITKFEMInDoxygenGroup .......................................................... Passed 0.10 sec Start 608: itkFEMElement3DMembraneTest 606/2822 Test #605: itkFEMElement2DMembraneTest ................................................... Passed 0.10 sec Start 609: itkFEMExceptionTest 607/2822 Test #606: itkFEMElement2DQuadraticTriangularTest ........................................ Passed 0.10 sec Start 610: itkFEMLinearSystemWrapperDenseVNLTest 608/2822 Test #607: itkFEMElement2DStrainTest ..................................................... Passed 0.12 sec Start 611: itkFEMLinearSystemWrapperItpackTest 609/2822 Test #608: itkFEMElement3DMembraneTest ................................................... Passed 0.09 sec Start 612: itkFEMLinearSystemWrapperItpackTest1 610/2822 Test #609: itkFEMExceptionTest ........................................................... Passed 0.09 sec Start 613: itkFEMLinearSystemWrapperItpackTest2 611/2822 Test #611: itkFEMLinearSystemWrapperItpackTest ........................................... Passed 0.06 sec Start 614: itkFEMLinearSystemWrapperItpackTest3 612/2822 Test #610: itkFEMLinearSystemWrapperDenseVNLTest ......................................... Passed 0.10 sec Start 615: itkFEMLinearSystemWrapperItpackTest4 613/2822 Test #612: itkFEMLinearSystemWrapperItpackTest1 .......................................... Passed 0.07 sec Start 616: itkFEMLinearSystemWrapperItpackTest5 614/2822 Test #613: itkFEMLinearSystemWrapperItpackTest2 .......................................... Passed 0.07 sec Start 617: itkFEMLinearSystemWrapperItpackTest6 615/2822 Test #614: itkFEMLinearSystemWrapperItpackTest3 .......................................... Passed 0.06 sec Start 618: itkFEMLinearSystemWrapperItpackTest7 616/2822 Test #566: itkTimeVaryingBSplineVelocityFieldTransformTest ............................... Passed 2.38 sec Start 619: itkFEMLinearSystemWrapperItpackTest8 617/2822 Test #615: itkFEMLinearSystemWrapperItpackTest4 .......................................... Passed 0.06 sec Start 620: itkFEMLinearSystemWrapperItpackTest9 618/2822 Test #616: itkFEMLinearSystemWrapperItpackTest5 .......................................... Passed 0.07 sec Start 621: itkFEMLinearSystemWrapperItpackTest10 619/2822 Test #617: itkFEMLinearSystemWrapperItpackTest6 .......................................... Passed 0.04 sec Start 622: itkFEMLinearSystemWrapperItpackTest11 620/2822 Test #618: itkFEMLinearSystemWrapperItpackTest7 .......................................... Passed 0.05 sec Start 623: itkFEMLinearSystemWrapperItpackTest12 621/2822 Test #619: itkFEMLinearSystemWrapperItpackTest8 .......................................... Passed 0.05 sec Start 624: itkFEMLinearSystemWrapperItpackTest13 622/2822 Test #621: itkFEMLinearSystemWrapperItpackTest10 ......................................... Passed 0.04 sec Start 625: itkFEMLinearSystemWrapperItpackTest14 623/2822 Test #622: itkFEMLinearSystemWrapperItpackTest11 ......................................... Passed 0.04 sec Start 626: itkFEMLinearSystemWrapperVNLTest 624/2822 Test #623: itkFEMLinearSystemWrapperItpackTest12 ......................................... Passed 0.04 sec Start 627: itkFEMPArrayTest 625/2822 Test #620: itkFEMLinearSystemWrapperItpackTest9 .......................................... Passed 0.09 sec Start 628: itkFEMScatteredDataPointSetToImageFilterTest 626/2822 Test #624: itkFEMLinearSystemWrapperItpackTest13 ......................................... Passed 0.05 sec Start 629: itkFEMC0HexahedralElement-NodalLoads-BCs 627/2822 Test #625: itkFEMLinearSystemWrapperItpackTest14 ......................................... Passed 0.05 sec Start 630: itkFEMC0HexahedralElement-NoLoads 628/2822 Test #626: itkFEMLinearSystemWrapperVNLTest .............................................. Passed 0.06 sec Start 631: itkFEMC0HexahedralElement-GravityLoad-BCs 629/2822 Test #627: itkFEMPArrayTest .............................................................. Passed 0.06 sec Start 632: itkFEMC0TetrahedralElement-NodalLoads-BCs 630/2822 Test #628: itkFEMScatteredDataPointSetToImageFilterTest .................................. Passed 0.04 sec Start 633: itkFEMC0TetrahedralElement-NoLoads 631/2822 Test #630: itkFEMC0HexahedralElement-NoLoads ............................................. Passed 0.07 sec Start 634: itkFEMC0TetrahedralElement-GravityLoad-BCs 632/2822 Test #629: itkFEMC0HexahedralElement-NodalLoads-BCs ...................................... Passed 0.09 sec Start 635: itkFEMC0QuadElement-NodalLoads-BCs 633/2822 Test #632: itkFEMC0TetrahedralElement-NodalLoads-BCs ..................................... Passed 0.05 sec Start 636: itkFEMC0QuadElement-Strain 634/2822 Test #633: itkFEMC0TetrahedralElement-NoLoads ............................................ Passed 0.05 sec Start 637: itkFEMC0QuadElement-NoLoads 635/2822 Test #631: itkFEMC0HexahedralElement-GravityLoad-BCs ..................................... Passed 0.08 sec Start 638: itkFEMC0QuadElement-GravityLoad-BCs 636/2822 Test #634: itkFEMC0TetrahedralElement-GravityLoad-BCs .................................... Passed 0.05 sec Start 639: itkFEMLoadLandmarkImplementation 637/2822 Test #636: itkFEMC0QuadElement-Strain .................................................... Passed 0.05 sec Start 640: itkFEMC0QuadElementTrapezoidalGeometry-NoLoads 638/2822 Test #635: itkFEMC0QuadElement-NodalLoads-BCs ............................................ Passed 0.06 sec Start 641: itkFEMC0TriangularElement-NodalLoads-BCs 639/2822 Test #637: itkFEMC0QuadElement-NoLoads ................................................... Passed 0.07 sec Start 642: itkFEMC0TriangularElement-NoLoads 640/2822 Test #638: itkFEMC0QuadElement-GravityLoad-BCs ........................................... Passed 0.06 sec Start 643: itkFEMC0TriangularElement-Strain 641/2822 Test #639: itkFEMLoadLandmarkImplementation .............................................. Passed 0.05 sec Start 644: itkFEMC0TriangularElement-Quadratic 642/2822 Test #640: itkFEMC0QuadElementTrapezoidalGeometry-NoLoads ................................ Passed 0.04 sec Start 645: itkFEMTruss 643/2822 Test #641: itkFEMC0TriangularElement-NodalLoads-BCs ...................................... Passed 0.06 sec Start 646: itkFEMSolverHyperbolicTest 644/2822 Test #642: itkFEMC0TriangularElement-NoLoads ............................................. Passed 0.05 sec Start 647: itkFEMElement2DC0LinearQuadrilateralStrainTest 645/2822 Test #643: itkFEMC0TriangularElement-Strain .............................................. Passed 0.06 sec Start 648: itkFEMElement2DC0LinearQuadrilateralStressTest 646/2822 Test #644: itkFEMC0TriangularElement-Quadratic ........................................... Passed 0.06 sec Start 649: itkFEMElement2DC0LinearQuadrilateralMembraneTest 647/2822 Test #645: itkFEMTruss ................................................................... Passed 0.08 sec Start 650: itkFEMElement2DC0LinearTriangleMembraneTest 648/2822 Test #646: itkFEMSolverHyperbolicTest .................................................... Passed 0.05 sec Start 651: itkFEMElement2DC0LinearTriangleStressTest 649/2822 Test #647: itkFEMElement2DC0LinearQuadrilateralStrainTest ................................ Passed 0.06 sec Start 652: itkFEMElement2DC0LinearTriangleStrainTest 650/2822 Test #648: itkFEMElement2DC0LinearQuadrilateralStressTest ................................ Passed 0.06 sec Start 653: itkFEMElement2DC0QuadraticTriangleStrainTest 651/2822 Test #649: itkFEMElement2DC0LinearQuadrilateralMembraneTest .............................. Passed 0.06 sec Start 654: itkFEMElement2DC0QuadraticTriangleStressTest 652/2822 Test #650: itkFEMElement2DC0LinearTriangleMembraneTest ................................... Passed 0.05 sec Start 655: itkFEMElement2DC0LinearLineStressTest 653/2822 Test #651: itkFEMElement2DC0LinearTriangleStressTest ..................................... Passed 0.07 sec Start 656: itkFEMElement2DC0LinearQuadrilateralStrainItpackTest 654/2822 Test #652: itkFEMElement2DC0LinearTriangleStrainTest ..................................... Passed 0.06 sec Start 657: itkFEMElement2DC1BeamTest 655/2822 Test #589: itkFastChamferDistanceImageFilterTest4 ........................................ Passed 1.48 sec Start 658: itkFEMElement3DC0LinearHexahedronStrainTest 656/2822 Test #654: itkFEMElement2DC0QuadraticTriangleStressTest .................................. Passed 0.05 sec Start 659: itkFEMElement3DC0LinearHexahedronMembraneTest 657/2822 Test #656: itkFEMElement2DC0LinearQuadrilateralStrainItpackTest .......................... Passed 0.05 sec Start 660: itkFEMElement3DC0LinearTetrahedronStrainTest 658/2822 Test #653: itkFEMElement2DC0QuadraticTriangleStrainTest .................................. Passed 0.09 sec Start 661: itkFEMElement3DC0LinearTetrahedronMembraneTest 659/2822 Test #655: itkFEMElement2DC0LinearLineStressTest ......................................... Passed 0.08 sec Start 662: itkFEMLoadBCMFCTest 660/2822 Test #657: itkFEMElement2DC1BeamTest ..................................................... Passed 0.05 sec Start 663: itkFEMLoadBCMFCTestUser 661/2822 Test #658: itkFEMElement3DC0LinearHexahedronStrainTest ................................... Passed 0.06 sec Start 664: itkFEMLoadEdgeTest 662/2822 Test #660: itkFEMElement3DC0LinearTetrahedronStrainTest .................................. Passed 0.05 sec Start 665: itkFEMLoadGravConstTest 663/2822 Test #659: itkFEMElement3DC0LinearHexahedronMembraneTest ................................. Passed 0.08 sec Start 666: itkFEMLoadPointTestUser 664/2822 Test #662: itkFEMLoadBCMFCTest ........................................................... Passed 0.05 sec Start 667: itkFEMLandmarkLoadImplementationTest 665/2822 Test #663: itkFEMLoadBCMFCTestUser ....................................................... Passed 0.05 sec Start 668: itkFEMObjectTest 666/2822 Test #661: itkFEMElement3DC0LinearTetrahedronMembraneTest ................................ Passed 0.06 sec Start 669: itkFEMObjectTest2 667/2822 Test #665: itkFEMLoadGravConstTest ....................................................... Passed 0.05 sec Start 670: itkFEMSpatialObjectTest 668/2822 Test #576: itkDanielssonDistanceMapImageFilterTest ....................................... Passed 2.21 sec Start 671: itkFEMSolverTest3D 669/2822 Test #664: itkFEMLoadEdgeTest ............................................................ Passed 0.07 sec Start 672: itkFEMRobustSolverTest 670/2822 Test #666: itkFEMLoadPointTestUser ....................................................... Passed 0.05 sec Start 673: itkImageToRectilinearFEMObjectFilter2DTest 671/2822 Test #668: itkFEMObjectTest .............................................................. Passed 0.05 sec Start 674: itkImageToRectilinearFEMObjectFilter3DTest 672/2822 Test #667: itkFEMLandmarkLoadImplementationTest .......................................... Passed 0.05 sec Start 675: ITKPDEDeformableRegistrationInDoxygenGroup 673/2822 Test #669: itkFEMObjectTest2 ............................................................. Passed 0.07 sec Start 676: ITKFEMRegistrationInDoxygenGroup 674/2822 Test #670: itkFEMSpatialObjectTest ....................................................... Passed 0.04 sec Start 677: itkFEMFiniteDifferenceFunctionLoadTest 675/2822 Test #671: itkFEMSolverTest3D ............................................................ Passed 0.04 sec Start 678: itkFEMRegistrationFilterTest 676/2822 Test #672: itkFEMRobustSolverTest ........................................................ Passed 0.05 sec Start 679: itkFEMRegistrationFilter2DTest 677/2822 Test #675: ITKPDEDeformableRegistrationInDoxygenGroup .................................... Passed 0.04 sec Start 680: itkMIRegistrationFunctionTest 678/2822 Test #674: itkImageToRectilinearFEMObjectFilter3DTest .................................... Passed 0.05 sec Start 681: itkFEMRegistrationFilterTest2 679/2822 Test #673: itkImageToRectilinearFEMObjectFilter2DTest .................................... Passed 0.06 sec Start 682: itkPhysicsBasedNonRigidRegistrationMethodTest 680/2822 Test #676: ITKFEMRegistrationInDoxygenGroup .............................................. Passed 0.03 sec Start 683: itkVnlFFTTest 681/2822 Test #680: itkMIRegistrationFunctionTest ................................................. Passed 0.04 sec Start 684: itkVnlRealFFTTest 682/2822 Test #684: itkVnlRealFFTTest ............................................................. Passed 0.07 sec Start 685: itkFFTWF_FFTTest 683/2822 Test #683: itkVnlFFTTest ................................................................. Passed 0.12 sec Start 686: itkFFTWF_RealFFTTest 684/2822 Test #679: itkFEMRegistrationFilter2DTest ................................................ Passed 0.15 sec Start 687: itkVnlFFTWF_FFTTest 685/2822 Test #505: itkPatchBasedDenoisingImageFilterTestTensors .................................. Passed 6.14 sec Start 688: itkVnlFFTWF_RealFFTTest 686/2822 Test #677: itkFEMFiniteDifferenceFunctionLoadTest ........................................ Passed 0.59 sec Start 689: itkFFTWD_FFTTest 687/2822 Test #689: itkFFTWD_FFTTest .............................................................. Passed 0.09 sec Start 690: itkFFTWD_RealFFTTest 688/2822 Test #690: itkFFTWD_RealFFTTest .......................................................... Passed 0.06 sec Start 691: itkVnlFFTWD_FFTTest 689/2822 Test #678: itkFEMRegistrationFilterTest .................................................. Passed 5.14 sec Start 692: itkVnlFFTWD_RealFFTTest 690/2822 Test #681: itkFEMRegistrationFilterTest2 ................................................. Passed 10.09 sec Start 693: itkFFTShiftImageFilterTestOdd0 691/2822 Test #693: itkFFTShiftImageFilterTestOdd0 ................................................ Passed 0.11 sec Start 694: itkFFTShiftImageFilterTestOdd1 692/2822 Test #691: itkVnlFFTWD_FFTTest ........................................................... Passed 9.50 sec Start 695: itkFFTShiftImageFilterTestEven0 693/2822 Test #695: itkFFTShiftImageFilterTestEven0 ............................................... Passed 0.10 sec Start 696: itkFFTShiftImageFilterTestEven1 694/2822 Test #694: itkFFTShiftImageFilterTestOdd1 ................................................ Passed 0.13 sec Start 697: itkHalfToFullHermitianImageFilterTestEvenEven 695/2822 Test #697: itkHalfToFullHermitianImageFilterTestEvenEven ................................. Passed 0.05 sec Start 698: itkHalfToFullHermitianImageFilterTestEvenOdd 696/2822 Test #698: itkHalfToFullHermitianImageFilterTestEvenOdd .................................. Passed 0.05 sec Start 699: itkHalfToFullHermitianImageFilterTestOddEven 697/2822 Test #696: itkFFTShiftImageFilterTestEven1 ............................................... Passed 0.18 sec Start 700: itkHalfToFullHermitianImageFilterTestOddOdd 698/2822 Test #682: itkPhysicsBasedNonRigidRegistrationMethodTest ................................. Passed 10.49 sec Start 701: itkFullToHalfHermitianImageFilterTestEvenEven 699/2822 Test #699: itkHalfToFullHermitianImageFilterTestOddEven .................................. Passed 0.07 sec Start 702: itkFullToHalfHermitianImageFilterTestEvenOdd 700/2822 Test #700: itkHalfToFullHermitianImageFilterTestOddOdd ................................... Passed 0.07 sec Start 703: itkFullToHalfHermitianImageFilterTestOddEven 701/2822 Test #701: itkFullToHalfHermitianImageFilterTestEvenEven ................................. Passed 0.06 sec Start 704: itkFullToHalfHermitianImageFilterTestOddOdd 702/2822 Test #702: itkFullToHalfHermitianImageFilterTestEvenOdd .................................. Passed 0.07 sec Start 705: itkForwardInverseFFTImageFilterTest1 703/2822 Test #704: itkFullToHalfHermitianImageFilterTestOddOdd ................................... Passed 0.05 sec Start 706: itkForwardInverseFFTImageFilterTest2 704/2822 Test #703: itkFullToHalfHermitianImageFilterTestOddEven .................................. Passed 0.07 sec Start 707: itkComplexToComplexFFTImageFilter2DFloatTest 705/2822 Test #707: itkComplexToComplexFFTImageFilter2DFloatTest .................................. Passed 0.09 sec Start 708: itkComplexToComplexFFTImageFilter3DFloatTest 706/2822 Test #705: itkForwardInverseFFTImageFilterTest1 .......................................... Passed 0.20 sec Start 709: itkComplexToComplexFFTImageFilter2DDoubleTest 707/2822 Test #708: itkComplexToComplexFFTImageFilter3DFloatTest .................................. Passed 0.12 sec Start 710: itkComplexToComplexFFTImageFilter3DDoubleTest 708/2822 Test #706: itkForwardInverseFFTImageFilterTest2 .......................................... Passed 0.22 sec Start 711: itkVnlComplexToComplexFFTImageFilter2DFloatTest 709/2822 Test #709: itkComplexToComplexFFTImageFilter2DDoubleTest ................................. Passed 0.12 sec Start 712: itkVnlComplexToComplexFFTImageFilter3DFloatTest 710/2822 Test #711: itkVnlComplexToComplexFFTImageFilter2DFloatTest ............................... Passed 0.11 sec Start 713: itkVnlComplexToComplexFFTImageFilter2DDoubleTest 711/2822 Test #710: itkComplexToComplexFFTImageFilter3DDoubleTest ................................. Passed 0.14 sec Start 714: itkVnlComplexToComplexFFTImageFilter3DDoubleTest 712/2822 Test #712: itkVnlComplexToComplexFFTImageFilter3DFloatTest ............................... Passed 0.14 sec Start 715: itkFFTWComplexToComplexFFTImageFilter2DFloatTest 713/2822 Test #713: itkVnlComplexToComplexFFTImageFilter2DDoubleTest .............................. Passed 0.13 sec Start 716: itkFFTWComplexToComplexFFTImageFilter3DFloatTest 714/2822 Test #714: itkVnlComplexToComplexFFTImageFilter3DDoubleTest .............................. Passed 0.11 sec Start 717: itkFFTWComplexToComplexFFTImageFilter2DDoubleTest 715/2822 Test #715: itkFFTWComplexToComplexFFTImageFilter2DFloatTest .............................. Passed 0.11 sec Start 718: itkFFTWComplexToComplexFFTImageFilter3DDoubleTest 716/2822 Test #716: itkFFTWComplexToComplexFFTImageFilter3DFloatTest .............................. Passed 0.12 sec Start 719: itkFFTPadImageFilterTestZeroFluxNeumann5 717/2822 Test #717: itkFFTWComplexToComplexFFTImageFilter2DDoubleTest ............................. Passed 0.13 sec Start 720: itkFFTPadImageFilterTestZeroFluxNeumann13 718/2822 Test #719: itkFFTPadImageFilterTestZeroFluxNeumann5 ...................................... Passed 0.08 sec Start 721: itkFFTPadImageFilterTestZero5 719/2822 Test #718: itkFFTWComplexToComplexFFTImageFilter3DDoubleTest ............................. Passed 0.13 sec Start 722: itkFFTPadImageFilterTestZero13 720/2822 Test #720: itkFFTPadImageFilterTestZeroFluxNeumann13 ..................................... Passed 0.10 sec Start 723: itkFFTPadImageFilterTestWrap5 721/2822 Test #721: itkFFTPadImageFilterTestZero5 ................................................. Passed 0.07 sec Start 724: itkFFTPadImageFilterTestWrap13 722/2822 Test #722: itkFFTPadImageFilterTestZero13 ................................................ Passed 0.07 sec Start 725: ITKIOMeshInDoxygenGroup 723/2822 Test #723: itkFFTPadImageFilterTestWrap5 ................................................. Passed 0.07 sec Start 726: itkFastMarchingExtensionImageFilterTest 724/2822 Test #725: ITKIOMeshInDoxygenGroup ....................................................... Passed 0.04 sec Start 727: itkFastMarchingTest 725/2822 Test #724: itkFFTPadImageFilterTestWrap13 ................................................ Passed 0.09 sec Start 728: itkFastMarchingTest2 726/2822 Test #727: itkFastMarchingTest ........................................................... Passed 0.05 sec Start 729: itkFastMarchingUpwindGradientTest 727/2822 Test #726: itkFastMarchingExtensionImageFilterTest ....................................... Passed 0.07 sec Start 730: itkFastMarchingBaseTest0 728/2822 Test #728: itkFastMarchingTest2 .......................................................... Passed 0.05 sec Start 731: itkFastMarchingBaseTest1 729/2822 Test #730: itkFastMarchingBaseTest0 ...................................................... Passed 0.04 sec Start 732: itkFastMarchingImageFilterBaseTest 730/2822 Test #729: itkFastMarchingUpwindGradientTest ............................................. Passed 0.05 sec Start 733: itkFastMarchingImageFilterRealTest1 731/2822 Test #733: itkFastMarchingImageFilterRealTest1 ........................................... Passed 0.05 sec Start 734: itkFastMarchingImageFilterRealTest2 732/2822 Test #731: itkFastMarchingBaseTest1 ...................................................... Passed 0.07 sec Start 735: itkFastMarchingImageFilterRealWithNumberOfElementsTest 733/2822 Test #732: itkFastMarchingImageFilterBaseTest ............................................ Passed 0.08 sec Start 736: itkFastMarchingUpwindGradientBaseTest 734/2822 Test #734: itkFastMarchingImageFilterRealTest2 ........................................... Passed 0.06 sec Start 737: itkFastMarchingQuadEdgeMeshFilterBaseTest 735/2822 Test #735: itkFastMarchingImageFilterRealWithNumberOfElementsTest ........................ Passed 0.07 sec Start 738: itkFastMarchingQuadEdgeMeshFilterBaseTest2 736/2822 Test #736: itkFastMarchingUpwindGradientBaseTest ......................................... Passed 0.06 sec Start 739: itkFastMarchingQuadEdgeMeshFilterBaseTest3 737/2822 Test #738: itkFastMarchingQuadEdgeMeshFilterBaseTest2 .................................... Passed 0.04 sec Start 740: itkFastMarchingQuadEdgeMeshFilterBaseTest4 738/2822 Test #739: itkFastMarchingQuadEdgeMeshFilterBaseTest3 .................................... Passed 0.07 sec Start 741: itkFastMarchingQuadEdgeMeshFilterWithNumberOfElementsTest 739/2822 Test #740: itkFastMarchingQuadEdgeMeshFilterBaseTest4 .................................... Passed 0.06 sec Start 742: itkFastMarchingStoppingCriterionBaseTest 740/2822 Test #742: itkFastMarchingStoppingCriterionBaseTest ...................................... Passed 0.07 sec Start 743: itkFastMarchingThresholdStoppingCriterionTest 741/2822 Test #743: itkFastMarchingThresholdStoppingCriterionTest ................................. Passed 0.04 sec Start 744: itkFastMarchingNumberOfElementsStoppingCriterionTest 742/2822 Test #737: itkFastMarchingQuadEdgeMeshFilterBaseTest ..................................... Passed 0.28 sec Start 745: itkFastMarchingImageFilterTest_Brain2D_SingleSeed_NoTopo 743/2822 Test #744: itkFastMarchingNumberOfElementsStoppingCriterionTest .......................... Passed 0.06 sec Start 746: itkFastMarchingImageFilterTest_Brain2D_SingleSeed_StrictTopo 744/2822 Test #741: itkFastMarchingQuadEdgeMeshFilterWithNumberOfElementsTest ..................... Passed 0.22 sec Start 747: itkFastMarchingImageFilterTest_Brain2D_SingleSeed_NoHandlesTopo 745/2822 Test #745: itkFastMarchingImageFilterTest_Brain2D_SingleSeed_NoTopo ...................... Passed 0.08 sec Start 748: itkFastMarchingImageFilterTest_Brain2D_multipleSeeds_NoTopo 746/2822 Test #746: itkFastMarchingImageFilterTest_Brain2D_SingleSeed_StrictTopo .................. Passed 0.09 sec Start 749: itkFastMarchingImageFilterTest_Brain2D_multipleSeeds_StrictTopo 747/2822 Test #748: itkFastMarchingImageFilterTest_Brain2D_multipleSeeds_NoTopo ................... Passed 0.07 sec Start 750: itkFastMarchingImageFilterTest_Brain2D_multipleSeeds_NoHandlesTopo 748/2822 Test #747: itkFastMarchingImageFilterTest_Brain2D_SingleSeed_NoHandlesTopo ............... Passed 0.12 sec Start 751: itkFastMarchingImageFilterTest_torus_multipleSeeds_NoTopo 749/2822 Test #749: itkFastMarchingImageFilterTest_Brain2D_multipleSeeds_StrictTopo ............... Passed 0.10 sec Start 752: itkFastMarchingImageFilterTest_torus_multipleSeeds_StrictTopo 750/2822 Test #750: itkFastMarchingImageFilterTest_Brain2D_multipleSeeds_NoHandlesTopo ............ Passed 0.07 sec Start 753: itkFastMarchingImageFilterTest_torus_multipleSeeds_NoHandlesTopo 751/2822 Test #751: itkFastMarchingImageFilterTest_torus_multipleSeeds_NoTopo ..................... Passed 1.25 sec Start 754: itkFastMarchingImageFilterTest_wm_multipleSeeds_NoTopo 752/2822 Test #752: itkFastMarchingImageFilterTest_torus_multipleSeeds_StrictTopo ................. Passed 2.26 sec Start 755: itkFastMarchingImageFilterTest_wm_multipleSeeds_StrictTopo 753/2822 Test #753: itkFastMarchingImageFilterTest_torus_multipleSeeds_NoHandlesTopo .............. Passed 2.60 sec Start 756: itkFastMarchingImageFilterTest_wm_multipleSeeds_NoHandlesTopo 754/2822 Test #692: itkVnlFFTWD_RealFFTTest ....................................................... Passed 9.60 sec Start 757: ITKGPUCommonInDoxygenGroup 755/2822 Test #757: ITKGPUCommonInDoxygenGroup .................................................... Passed 0.04 sec Start 758: ITKGPUFiniteDifferenceInDoxygenGroup 756/2822 Test #758: ITKGPUFiniteDifferenceInDoxygenGroup .......................................... Passed 0.02 sec Start 759: ITKGPUAnisotropicSmoothingInDoxygenGroup 757/2822 Test #759: ITKGPUAnisotropicSmoothingInDoxygenGroup ...................................... Passed 0.02 sec Start 760: ITKGPUImageFilterBaseInDoxygenGroup 758/2822 Test #760: ITKGPUImageFilterBaseInDoxygenGroup ........................................... Passed 0.02 sec Start 761: ITKGPURegistrationCommonInDoxygenGroup 759/2822 Test #761: ITKGPURegistrationCommonInDoxygenGroup ........................................ Passed 0.02 sec Start 762: ITKGPUPDEDeformableRegistrationInDoxygenGroup 760/2822 Test #762: ITKGPUPDEDeformableRegistrationInDoxygenGroup ................................. Passed 0.02 sec Start 763: ITKGPUSmoothingInDoxygenGroup 761/2822 Test #763: ITKGPUSmoothingInDoxygenGroup ................................................. Passed 0.02 sec Start 764: ITKGPUThresholdingInDoxygenGroup 762/2822 Test #764: ITKGPUThresholdingInDoxygenGroup .............................................. Passed 0.02 sec Start 765: itkBMPImageIOTest5 763/2822 Test #765: itkBMPImageIOTest5 ............................................................ Passed 0.13 sec Start 766: itkBMPImageIOTest6 764/2822 Test #766: itkBMPImageIOTest6 ............................................................ Passed 0.08 sec Start 767: itkBMPImageIOTest 765/2822 Test #767: itkBMPImageIOTest ............................................................. Passed 0.12 sec Start 768: itkBMPImageIOTest2 766/2822 Test #768: itkBMPImageIOTest2 ............................................................ Passed 0.08 sec Start 769: itkBMPImageIOTest3 767/2822 Test #769: itkBMPImageIOTest3 ............................................................ Passed 0.09 sec Start 770: itkBMPImageIOTest4 768/2822 Test #770: itkBMPImageIOTest4 ............................................................ Passed 0.08 sec Start 771: itkBMPImageIOTest7 769/2822 Test #771: itkBMPImageIOTest7 ............................................................ Passed 0.04 sec Start 772: itkBMPImageIOTest8 770/2822 Test #772: itkBMPImageIOTest8 ............................................................ Passed 0.04 sec Start 773: itkBMPImageIOTest9 771/2822 Test #773: itkBMPImageIOTest9 ............................................................ Passed 0.06 sec Start 774: itkBMPImageIOTestPaletteExpanded 772/2822 Test #774: itkBMPImageIOTestPaletteExpanded .............................................. Passed 0.11 sec Start 775: itkBMPImageIOTestPaletteNotExpanded 773/2822 Test #775: itkBMPImageIOTestPaletteNotExpanded ........................................... Passed 0.08 sec Start 776: itkBMPImageIOTestPaletteNotExpandedGrey 774/2822 Test #776: itkBMPImageIOTestPaletteNotExpandedGrey ....................................... Passed 0.04 sec Start 777: ITKBioRadImageIOTest 775/2822 Test #777: ITKBioRadImageIOTest .......................................................... Passed 0.07 sec Start 778: ITKIOCSVInDoxygenGroup 776/2822 Test #778: ITKIOCSVInDoxygenGroup ........................................................ Passed 0.02 sec Start 779: itkCSVArray2DFileReaderTest 777/2822 Test #779: itkCSVArray2DFileReaderTest ................................................... Passed 0.06 sec Start 780: itkCSVNumericObjectFileWriterTest 778/2822 Test #780: itkCSVNumericObjectFileWriterTest ............................................. Passed 0.04 sec Start 781: itkCSVArray2DFileReaderWriterTest 779/2822 Test #781: itkCSVArray2DFileReaderWriterTest ............................................. Passed 0.06 sec Start 782: itkGDCMImageIOTest1 780/2822 Test #782: itkGDCMImageIOTest1 ........................................................... Passed 0.16 sec Start 783: itkGDCMImageIOTest2 781/2822 Test #687: itkVnlFFTWF_FFTTest ........................................................... Passed 16.25 sec Start 784: itkGDCMImageIOTest3 782/2822 Test #783: itkGDCMImageIOTest2 ........................................................... Passed 0.14 sec Start 785: itkGDCMImageIOTest4 783/2822 Test #784: itkGDCMImageIOTest3 ........................................................... Passed 0.10 sec Start 786: itkGDCMImageIOTest5 784/2822 Test #785: itkGDCMImageIOTest4 ........................................................... Passed 0.10 sec Start 787: itkGDCMSeriesReadImageWriteTest 785/2822 Test #786: itkGDCMImageIOTest5 ........................................................... Passed 0.09 sec Start 788: itkGDCMSeriesStreamReadImageWriteTest1 786/2822 Test #787: itkGDCMSeriesReadImageWriteTest ............................................... Passed 0.06 sec Start 789: itkGDCMSeriesStreamReadImageWriteTest2 787/2822 Test #789: itkGDCMSeriesStreamReadImageWriteTest2 ........................................ Passed 0.06 sec Start 790: itkGDCMImagePositionPatientTest 788/2822 Test #788: itkGDCMSeriesStreamReadImageWriteTest1 ........................................ Passed 0.09 sec Start 791: itkGDCMImageReadSeriesWriteTest 789/2822 Test #790: itkGDCMImagePositionPatientTest ............................................... Passed 0.06 sec Start 792: itkGDCMSeriesMissingDicomTagTest 790/2822 Test #792: itkGDCMSeriesMissingDicomTagTest .............................................. Passed 0.05 sec Start 793: itkGDCMImageIOOrthoDirTest 791/2822 Test #791: itkGDCMImageReadSeriesWriteTest ............................................... Passed 0.11 sec Start 794: itkGDCMImageOrientationPatientTest 792/2822 Test #793: itkGDCMImageIOOrthoDirTest .................................................... Passed 0.06 sec Start 795: itkGDCMImageIONoCrashTest 793/2822 Test #794: itkGDCMImageOrientationPatientTest ............................................ Passed 0.06 sec Start 796: itkGDCMLoadImageSpacingTest 794/2822 Test #795: itkGDCMImageIONoCrashTest ..................................................... Passed 0.05 sec Start 797: itkGDCMLoadImageNoSpacingTest 795/2822 Test #796: itkGDCMLoadImageSpacingTest ................................................... Passed 0.05 sec Start 798: ITKIOIPLInDoxygenGroup 796/2822 Test #797: itkGDCMLoadImageNoSpacingTest ................................................. Passed 0.05 sec Start 799: ITKIOGEInDoxygenGroup 797/2822 Test #798: ITKIOIPLInDoxygenGroup ........................................................ Passed 0.04 sec Start 800: ITKIOSiemensInDoxygenGroup 798/2822 Test #800: ITKIOSiemensInDoxygenGroup .................................................... Passed 0.02 sec Start 801: itkGE4 799/2822 Test #799: ITKIOGEInDoxygenGroup ......................................................... Passed 0.03 sec Start 802: itkGE5 800/2822 Test #802: itkGE5 ........................................................................ Passed 0.09 sec Start 803: itkGE5Test2 801/2822 Test #801: itkGE4 ........................................................................ Passed 0.11 sec Start 804: itkGE5Test3 802/2822 Test #804: itkGE5Test3 ................................................................... Passed 0.08 sec Start 805: itkGE5Test4 803/2822 Test #803: itkGE5Test2 ................................................................... Passed 0.10 sec Start 806: itkGE5Test5 804/2822 Test #805: itkGE5Test4 ................................................................... Passed 0.09 sec Start 807: itkGEAdw 805/2822 Test #806: itkGE5Test5 ................................................................... Passed 0.08 sec Start 808: itkSiemens 806/2822 Test #688: itkVnlFFTWF_RealFFTTest ....................................................... Passed 17.06 sec Start 809: itkGE4Fail 807/2822 Test #808: itkSiemens .................................................................... Passed 0.05 sec Start 810: itkGE5Fail 808/2822 Test #807: itkGEAdw ...................................................................... Passed 0.06 sec Start 811: itkGEAdwFail 809/2822 Test #809: itkGE4Fail .................................................................... Passed 0.04 sec Start 812: itkSiemensFail 810/2822 Test #811: itkGEAdwFail .................................................................. Passed 0.04 sec Start 813: itkGiplImageIOTest 811/2822 Test #810: itkGE5Fail .................................................................... Passed 0.05 sec Start 814: itkGiplImageIOGzTest 812/2822 Test #812: itkSiemensFail ................................................................ Passed 0.04 sec Start 815: itkGiplImageIOTest2 813/2822 Test #815: itkGiplImageIOTest2 ........................................................... Passed 0.05 sec Start 816: ITKIOHDF5InDoxygenGroup 814/2822 Test #813: itkGiplImageIOTest ............................................................ Passed 0.07 sec Start 817: itkHDF5ImageIOTest 815/2822 Test #814: itkGiplImageIOGzTest .......................................................... Passed 0.07 sec Start 818: itkHDF5ImageIOStreamingReadWriteTest 816/2822 Test #816: ITKIOHDF5InDoxygenGroup ....................................................... Passed 0.02 sec Start 819: itkArchetypeSeriesFileNamesTest 817/2822 Test #819: itkArchetypeSeriesFileNamesTest ............................................... Passed 0.08 sec Start 820: itkArchetypeSeriesFileNamesTest2 818/2822 Test #818: itkHDF5ImageIOStreamingReadWriteTest .......................................... Passed 0.09 sec Start 821: itkConvertBufferTest 819/2822 Test #820: itkArchetypeSeriesFileNamesTest2 .............................................. Passed 0.05 sec Start 822: itkConvertBufferTest2 820/2822 Test #817: itkHDF5ImageIOTest ............................................................ Passed 0.14 sec Start 823: itkImageFileReaderTest1 821/2822 Test #821: itkConvertBufferTest .......................................................... Passed 0.05 sec Start 824: itkImageFileWriterTest 822/2822 Test #822: itkConvertBufferTest2 ......................................................... Passed 0.05 sec Start 825: itkIOCommonTest 823/2822 Test #823: itkImageFileReaderTest1 ....................................................... Passed 0.06 sec Start 826: itkIOCommonTest2 824/2822 Test #824: itkImageFileWriterTest ........................................................ Passed 0.05 sec Start 827: itkNumericSeriesFileNamesTest 825/2822 Test #825: itkIOCommonTest ............................................................... Passed 0.05 sec Start 828: itkRegularExpressionSeriesFileNamesTest 826/2822 Test #826: itkIOCommonTest2 .............................................................. Passed 0.04 sec Start 829: itkImageFileReaderDimensionsTest_MHD 827/2822 Test #827: itkNumericSeriesFileNamesTest ................................................. Passed 0.04 sec Start 830: itkImageFileReaderDimensionsTest_NRRD 828/2822 Test #829: itkImageFileReaderDimensionsTest_MHD .......................................... Passed 0.05 sec Start 831: itkImageFileReaderStreamingTest_1 829/2822 Test #828: itkRegularExpressionSeriesFileNamesTest ....................................... Passed 0.07 sec Start 832: itkImageFileReaderStreamingTest_2 830/2822 Test #830: itkImageFileReaderDimensionsTest_NRRD ......................................... Passed 0.06 sec Start 833: itkImageFileReaderStreamingTest_3 831/2822 Test #832: itkImageFileReaderStreamingTest_2 ............................................. Passed 0.04 sec Start 834: itkImageFileReaderStreamingTest2_MHD 832/2822 Test #831: itkImageFileReaderStreamingTest_1 ............................................. Passed 0.06 sec Start 835: itkImageFileWriterPastingTest1 833/2822 Test #833: itkImageFileReaderStreamingTest_3 ............................................. Passed 0.05 sec Start 836: itkImageFileWriterPastingTest2_5 834/2822 Test #835: itkImageFileWriterPastingTest1 ................................................ Passed 0.05 sec Start 837: itkImageFileWriterPastingTest2_6 835/2822 Test #836: itkImageFileWriterPastingTest2_5 .............................................. Passed 0.05 sec Start 838: itkImageFileWriterPastingTest2_7 836/2822 Test #834: itkImageFileReaderStreamingTest2_MHD .......................................... Passed 0.09 sec Start 839: itkImageFileWriterPastingTest3 837/2822 Test #838: itkImageFileWriterPastingTest2_7 .............................................. Passed 0.05 sec Start 840: itkImageFileWriterStreamingPastingCompressingTest_MHA 838/2822 Test #837: itkImageFileWriterPastingTest2_6 .............................................. Passed 0.07 sec Start 841: itkImageFileWriterStreamingPastingCompressingTest_NRRD 839/2822 Test #839: itkImageFileWriterPastingTest3 ................................................ Passed 0.05 sec Start 842: itkImageFileWriterStreamingPastingCompressingTest_NHDR 840/2822 Test #841: itkImageFileWriterStreamingPastingCompressingTest_NRRD ........................ Passed 0.07 sec Start 843: itkImageFileWriterStreamingPastingCompressingTest_VTK 841/2822 Test #842: itkImageFileWriterStreamingPastingCompressingTest_NHDR ........................ Passed 0.08 sec Start 844: itkImageFileWriterStreamingTest1_1 842/2822 Test #840: itkImageFileWriterStreamingPastingCompressingTest_MHA ......................... Passed 0.13 sec Start 845: itkImageFileWriterStreamingTest1_2 843/2822 Test #844: itkImageFileWriterStreamingTest1_1 ............................................ Passed 0.05 sec Start 846: itkImageFileWriterStreamingTest1_3 844/2822 Test #843: itkImageFileWriterStreamingPastingCompressingTest_VTK ......................... Passed 0.10 sec Start 847: itkImageFileWriterStreamingTest2_4 845/2822 Test #845: itkImageFileWriterStreamingTest1_2 ............................................ Passed 0.06 sec Start 848: itkImageFileWriterTest2_1 846/2822 Test #846: itkImageFileWriterStreamingTest1_3 ............................................ Passed 0.07 sec Start 849: itkImageFileWriterTest2_2 847/2822 Test #848: itkImageFileWriterTest2_1 ..................................................... Passed 0.04 sec Start 850: itkImageFileWriterTest2_3 848/2822 Test #849: itkImageFileWriterTest2_2 ..................................................... Passed 0.04 sec Start 851: itkImageFileWriterUpdateLargestPossibleRegionTest 849/2822 Test #847: itkImageFileWriterStreamingTest2_4 ............................................ Passed 0.11 sec Start 852: itkImageIOBaseTest 850/2822 Test #850: itkImageFileWriterTest2_3 ..................................................... Passed 0.05 sec Start 853: itkImageIODirection2DTest01 851/2822 Test #852: itkImageIOBaseTest ............................................................ Passed 0.04 sec Start 854: itkImageIODirection2DTest02 852/2822 Test #851: itkImageFileWriterUpdateLargestPossibleRegionTest ............................. Passed 0.10 sec Start 855: itkImageIODirection2DTest03 853/2822 Test #854: itkImageIODirection2DTest02 ................................................... Passed 0.05 sec Start 856: itkImageIODirection2DTest04 854/2822 Test #853: itkImageIODirection2DTest01 ................................................... Passed 0.10 sec Start 857: itkImageIODirection2DTest05 855/2822 Test #856: itkImageIODirection2DTest04 ................................................... Passed 0.04 sec Start 858: itkImageIODirection2DTest06 856/2822 Test #855: itkImageIODirection2DTest03 ................................................... Passed 0.05 sec Start 859: itkImageIODirection2DTest07 857/2822 Test #857: itkImageIODirection2DTest05 ................................................... Passed 0.06 sec Start 860: itkImageIODirection2DTest08 858/2822 Test #858: itkImageIODirection2DTest06 ................................................... Passed 0.04 sec Start 861: itkImageIODirection2DTest09 859/2822 Test #859: itkImageIODirection2DTest07 ................................................... Passed 0.04 sec Start 862: itkImageIODirection2DTest10 860/2822 Test #860: itkImageIODirection2DTest08 ................................................... Passed 0.05 sec Start 863: itkImageIODirection2DTest11 861/2822 Test #861: itkImageIODirection2DTest09 ................................................... Passed 0.04 sec Start 864: itkImageIODirection2DTest12 862/2822 Test #862: itkImageIODirection2DTest10 ................................................... Passed 0.04 sec Start 865: itkImageIODirection2DTest13 863/2822 Test #863: itkImageIODirection2DTest11 ................................................... Passed 0.05 sec Start 866: itkImageIODirection2DTest14 864/2822 Test #864: itkImageIODirection2DTest12 ................................................... Passed 0.04 sec Start 867: itkImageIODirection2DTest15 865/2822 Test #865: itkImageIODirection2DTest13 ................................................... Passed 0.04 sec Start 868: itkImageIODirection3DTest01 866/2822 Test #866: itkImageIODirection2DTest14 ................................................... Passed 0.04 sec Start 869: itkImageIODirection3DTest02 867/2822 Test #868: itkImageIODirection3DTest01 ................................................... Passed 0.04 sec Start 870: itkImageIODirection3DTest03 868/2822 Test #867: itkImageIODirection2DTest15 ................................................... Passed 0.05 sec Start 871: itkImageIODirection3DTest04 869/2822 Test #869: itkImageIODirection3DTest02 ................................................... Passed 0.04 sec Start 872: itkImageIODirection3DTest05 870/2822 Test #870: itkImageIODirection3DTest03 ................................................... Passed 0.05 sec Start 873: itkImageIODirection3DTest06 871/2822 Test #871: itkImageIODirection3DTest04 ................................................... Passed 0.04 sec Start 874: itkImageIODirection3DTest07 872/2822 Test #872: itkImageIODirection3DTest05 ................................................... Passed 0.06 sec Start 875: itkImageIODirection3DTest08 873/2822 Test #873: itkImageIODirection3DTest06 ................................................... Passed 0.05 sec Start 876: itkImageIODirection3DTest09 874/2822 Test #874: itkImageIODirection3DTest07 ................................................... Passed 0.05 sec Start 877: itkImageIOFileNameExtensionsTests 875/2822 Test #875: itkImageIODirection3DTest08 ................................................... Passed 0.04 sec Start 878: itkImageSeriesReaderDimensionsTest1 876/2822 Test #876: itkImageIODirection3DTest09 ................................................... Passed 0.04 sec Start 879: itkImageFileReaderPositiveSpacingTest 877/2822 Test #877: itkImageIOFileNameExtensionsTests ............................................. Passed 0.04 sec Start 880: itkImageSeriesReaderDimensionsTest2 878/2822 Test #879: itkImageFileReaderPositiveSpacingTest ......................................... Passed 0.04 sec Start 881: itkImageSeriesReaderVectorImageTest1 879/2822 Test #880: itkImageSeriesReaderDimensionsTest2 ........................................... Passed 0.07 sec Start 882: itkImageSeriesReaderVectorImageTest2 880/2822 Test #878: itkImageSeriesReaderDimensionsTest1 ........................................... Passed 0.09 sec Start 883: itkImageSeriesWriterTest 881/2822 Test #881: itkImageSeriesReaderVectorImageTest1 .......................................... Passed 0.06 sec Start 884: itkIOPluginTest 882/2822 Test #882: itkImageSeriesReaderVectorImageTest2 .......................................... Passed 0.06 sec Start 885: itkNoiseImageFilterTest 883/2822 Test #883: itkImageSeriesWriterTest ...................................................... Passed 0.10 sec Start 886: itkMatrixImageWriteReadTest 884/2822 Test #886: itkMatrixImageWriteReadTest ................................................... Passed 0.04 sec Start 887: itkReadWriteImageWithDictionaryTest 885/2822 Test #884: itkIOPluginTest ............................................................... Passed 0.14 sec Start 888: itkReadWriteImageWithDictionaryTest1 886/2822 Test #885: itkNoiseImageFilterTest ....................................................... Passed 0.13 sec Start 889: itkVectorImageReadWriteTest 887/2822 Test #887: itkReadWriteImageWithDictionaryTest ........................................... Passed 0.04 sec Start 890: itkVectorImageReadWriteTest2 888/2822 Test #888: itkReadWriteImageWithDictionaryTest1 .......................................... Passed 0.05 sec Start 891: itkUnicodeIOTest 889/2822 Test #891: itkUnicodeIOTest .............................................................. Passed 0.00 sec Start 892: itkJPEGImageIOTest 890/2822 Test #889: itkVectorImageReadWriteTest ................................................... Passed 0.06 sec Start 893: itkJPEGImageIOTest2 891/2822 Test #890: itkVectorImageReadWriteTest2 .................................................. Passed 0.06 sec Start 894: itkJPEGImageIOSpacing 892/2822 Test #894: itkJPEGImageIOSpacing ......................................................... Passed 0.05 sec Start 895: itkLSMImageIOTest 893/2822 Test #892: itkJPEGImageIOTest ............................................................ Passed 0.10 sec Start 896: ITKIOMRCInDoxygenGroup 894/2822 Test #896: ITKIOMRCInDoxygenGroup ........................................................ Passed 0.02 sec Start 897: itkMRCImageIOTest 895/2822 Test #893: itkJPEGImageIOTest2 ........................................................... Passed 0.11 sec Start 898: itkMRCImageIOTest2a 896/2822 Test #895: itkLSMImageIOTest ............................................................. Passed 0.07 sec Start 899: itkMRCImageIOTest2b 897/2822 Test #897: itkMRCImageIOTest ............................................................. Passed 0.10 sec Start 900: itkMRCImageIOTest2c 898/2822 Test #899: itkMRCImageIOTest2b ........................................................... Passed 0.09 sec Start 901: itkMeshFileReadWriteTest00 899/2822 Test #898: itkMRCImageIOTest2a ........................................................... Passed 0.14 sec Start 902: itkMeshFileReadWriteTest01 900/2822 Test #900: itkMRCImageIOTest2c ........................................................... Passed 0.07 sec Start 903: itkMeshFileReadWriteTest02 901/2822 Test #754: itkFastMarchingImageFilterTest_wm_multipleSeeds_NoTopo ........................ Passed 5.89 sec Start 904: itkMeshFileReadWriteTest03 902/2822 Test #901: itkMeshFileReadWriteTest00 .................................................... Passed 0.09 sec Start 905: itkMeshFileReadWriteTest04 903/2822 Test #902: itkMeshFileReadWriteTest01 .................................................... Passed 0.07 sec Start 906: itkMeshFileReadWriteTest05 904/2822 Test #903: itkMeshFileReadWriteTest02 .................................................... Passed 0.04 sec Start 907: itkMeshFileReadWriteTest06 905/2822 Test #904: itkMeshFileReadWriteTest03 .................................................... Passed 0.05 sec Start 908: itkMeshFileReadWriteTest07 906/2822 Test #906: itkMeshFileReadWriteTest05 .................................................... Passed 0.05 sec Start 909: itkMeshFileReadWriteTest08 907/2822 Test #907: itkMeshFileReadWriteTest06 .................................................... Passed 0.06 sec Start 910: itkMeshFileReadWriteTest09 908/2822 Test #908: itkMeshFileReadWriteTest07 .................................................... Passed 0.05 sec Start 911: itkMeshFileReadWriteTest10 909/2822 Test #910: itkMeshFileReadWriteTest09 .................................................... Passed 0.04 sec Start 912: itkMeshFileReadWriteTest11 910/2822 Test #905: itkMeshFileReadWriteTest04 .................................................... Passed 0.13 sec Start 913: itkMeshFileReadWriteTest12 911/2822 Test #909: itkMeshFileReadWriteTest08 .................................................... Passed 0.08 sec Start 914: itkPolylineReadWriteTest00 912/2822 Test #911: itkMeshFileReadWriteTest10 .................................................... Passed 0.07 sec Start 915: itkPolylineReadWriteTest01 913/2822 Test #914: itkPolylineReadWriteTest00 .................................................... Passed 0.05 sec Start 916: itkMeshFileWriteReadTensorTest 914/2822 Test #915: itkPolylineReadWriteTest01 .................................................... Passed 0.05 sec Start 917: itkMetaImageIOMetaDataTest 915/2822 Test #916: itkMeshFileWriteReadTensorTest ................................................ Passed 0.07 sec Start 918: itkMetaImageIOGzTest 916/2822 Test #917: itkMetaImageIOMetaDataTest .................................................... Passed 0.07 sec Start 919: itkMetaImageIOTest 917/2822 Test #918: itkMetaImageIOGzTest .......................................................... Passed 0.05 sec Start 920: itkMetaImageIOTestList 918/2822 Test #919: itkMetaImageIOTest ............................................................ Passed 0.07 sec Start 921: itkMetaImageIOTestListWithFilenameSpaces 919/2822 Test #920: itkMetaImageIOTestList ........................................................ Passed 0.07 sec Start 922: itkMetaImageIOTestRegEx 920/2822 Test #921: itkMetaImageIOTestListWithFilenameSpaces ...................................... Passed 0.06 sec Start 923: itkMetaImageIOTestRegExWithFilenameSpaces 921/2822 Test #922: itkMetaImageIOTestRegEx ....................................................... Passed 0.06 sec Start 924: itkMetaImageIOTest2 922/2822 Test #923: itkMetaImageIOTestRegExWithFilenameSpaces ..................................... Passed 0.05 sec Start 925: itkMetaImageIOShouldFailTest 923/2822 Test #924: itkMetaImageIOTest2 ........................................................... Passed 0.04 sec Start 926: testMetaGroup 924/2822 Test #925: itkMetaImageIOShouldFailTest .................................................. Passed 0.05 sec Start 927: testMetaImage 925/2822 Test #926: testMetaGroup ................................................................. Passed 0.04 sec Start 928: testMetaLandmark 926/2822 Test #927: testMetaImage ................................................................. Passed 0.05 sec Start 929: testMetaLine 927/2822 Test #913: itkMeshFileReadWriteTest12 .................................................... Passed 0.44 sec Start 930: testMetaMesh 928/2822 Test #928: testMetaLandmark .............................................................. Passed 0.06 sec Start 931: testMetaObject 929/2822 Test #930: testMetaMesh .................................................................. Passed 0.04 sec Start 932: testMetaScene 930/2822 Test #929: testMetaLine .................................................................. Passed 0.06 sec Start 933: testMetaSurface 931/2822 Test #931: testMetaObject ................................................................ Passed 0.07 sec Start 934: testMetaTube 932/2822 Test #932: testMetaScene ................................................................. Passed 0.05 sec Start 935: testMetaUtils 933/2822 Test #934: testMetaTube .................................................................. Passed 0.04 sec Start 936: MetaCommandRequiredOptionsWithMultipleStrings 934/2822 Test #933: testMetaSurface ............................................................... Passed 0.07 sec Start 937: MetaCommandRequiredOptionsWithMultipleStringsAtEnd 935/2822 Test #936: MetaCommandRequiredOptionsWithMultipleStrings ................................. Passed 0.04 sec Start 938: MetaCommandOptionalWithRequired 936/2822 Test #935: testMetaUtils ................................................................. Passed 0.08 sec Start 939: MetaCommandOptionalOptoinsWithOutArguments 937/2822 Test #937: MetaCommandRequiredOptionsWithMultipleStringsAtEnd ............................ Passed 0.06 sec Start 940: MetaCommandOptionalOptoinsWithOutArguments1 938/2822 Test #939: MetaCommandOptionalOptoinsWithOutArguments .................................... Passed 0.04 sec Start 941: MetaCommandRequiredAndOptionalOptoinsWithArguments 939/2822 Test #938: MetaCommandOptionalWithRequired ............................................... Passed 0.06 sec Start 942: MetaCommandRequiredAndOptionalOptoinsWithOutArguments 940/2822 Test #940: MetaCommandOptionalOptoinsWithOutArguments1 ................................... Passed 0.04 sec Start 943: MetaCommandRequiredAndOptionalOptoinsWithOutArguments-1 941/2822 Test #941: MetaCommandRequiredAndOptionalOptoinsWithArguments ............................ Passed 0.04 sec Start 944: MetaCommandRequiredOptionsWithMissingMultipleStrings 942/2822 Test #942: MetaCommandRequiredAndOptionalOptoinsWithOutArguments ......................... Passed 0.04 sec Start 945: MetaCommandRequiredOptionsWithMissingMultipleStringsAtEnd 943/2822 Test #943: MetaCommandRequiredAndOptionalOptoinsWithOutArguments-1 ....................... Passed 0.04 sec Start 946: MetaCommandOptionalWithRequiredMissing 944/2822 Test #944: MetaCommandRequiredOptionsWithMissingMultipleStrings .......................... Passed 0.04 sec Start 947: MetaCommandRequiredAndOptionalOptoinsWithArgumentsMissing 945/2822 Test #945: MetaCommandRequiredOptionsWithMissingMultipleStringsAtEnd ..................... Passed 0.04 sec Start 948: testMetaArray 946/2822 Test #946: MetaCommandOptionalWithRequiredMissing ........................................ Passed 0.05 sec Start 949: testMetaBlob 947/2822 Test #947: MetaCommandRequiredAndOptionalOptoinsWithArgumentsMissing ..................... Passed 0.04 sec Start 950: itkMetaImageStreamingIOTest 948/2822 Test #948: testMetaArray ................................................................. Passed 0.05 sec Start 951: itkMetaImageCompressedStreamingIOTest 949/2822 Test #949: testMetaBlob .................................................................. Passed 0.06 sec Start 952: itkMetaImageStreamingWriterIOTest 950/2822 Test #950: itkMetaImageStreamingIOTest ................................................... Passed 0.05 sec Start 953: itkMetaImageStreamingWriterIOTest2 951/2822 Test #952: itkMetaImageStreamingWriterIOTest ............................................. Passed 0.06 sec Start 954: itkMetaTestLongFilename 952/2822 Test #951: itkMetaImageCompressedStreamingIOTest ......................................... Passed 0.09 sec Start 955: itkNiftiIOBigEndianCompressed.hdr 953/2822 Test #953: itkMetaImageStreamingWriterIOTest2 ............................................ Passed 0.06 sec Start 956: itkNiftiIOBigEndianCompressed.img 954/2822 Test #954: itkMetaTestLongFilename ....................................................... Passed 0.04 sec Start 957: itkNiftiIOBigEndianCompressed.img.gz 955/2822 Test #955: itkNiftiIOBigEndianCompressed.hdr ............................................. Passed 0.04 sec Start 958: itkNiftiIOBigEndian 956/2822 Test #956: itkNiftiIOBigEndianCompressed.img ............................................. Passed 0.04 sec Start 959: itkNiftiIOLittleEndianCompressed 957/2822 Test #958: itkNiftiIOBigEndian ........................................................... Passed 0.04 sec Start 960: itkNiftiIOLittleEndian 958/2822 Test #957: itkNiftiIOBigEndianCompressed.img.gz .......................................... Passed 0.07 sec Start 961: itkNiftiIOInternalTests 959/2822 Test #959: itkNiftiIOLittleEndianCompressed .............................................. Passed 0.05 sec Start 962: itkNiftiIOShouldFail 960/2822 Test #960: itkNiftiIOLittleEndian ........................................................ Passed 0.05 sec Start 963: itkNiftiIOShouldSucceed 961/2822 Test #962: itkNiftiIOShouldFail .......................................................... Passed 0.04 sec Start 964: itkDirCosinesTest 962/2822 Test #961: itkNiftiIOInternalTests ....................................................... Passed 0.05 sec Start 965: itkNiftiSlopeInterceptTest 963/2822 Test #963: itkNiftiIOShouldSucceed ....................................................... Passed 0.04 sec Start 966: itkNiftiVectorImageTest2 964/2822 Test #964: itkDirCosinesTest ............................................................. Passed 0.04 sec Start 967: itkNiftiDiffusionTensor3dImageTest 965/2822 Test #965: itkNiftiSlopeInterceptTest .................................................... Passed 0.05 sec Start 968: itkNiftiSymmetricSecondRankTensorImageTest 966/2822 Test #966: itkNiftiVectorImageTest2 ...................................................... Passed 0.04 sec Start 969: itkNiftiRGBImageTest 967/2822 Test #967: itkNiftiDiffusionTensor3dImageTest ............................................ Passed 0.05 sec Start 970: itkNiftiRGBAImageTest 968/2822 Test #968: itkNiftiSymmetricSecondRankTensorImageTest .................................... Passed 0.05 sec Start 971: itkNiftiVectorImageTest 969/2822 Test #969: itkNiftiRGBImageTest .......................................................... Passed 0.04 sec Start 972: itkNiftiDimensionLimitsTest 970/2822 Test #970: itkNiftiRGBAImageTest ......................................................... Passed 0.04 sec Start 973: itkNiftiReadAnalyzeTest 971/2822 Test #971: itkNiftiVectorImageTest ....................................................... Passed 0.05 sec Start 974: itkNrrdImageIOTest1 972/2822 Test #972: itkNiftiDimensionLimitsTest ................................................... Passed 0.04 sec Start 975: itkNrrdImageIOTest2 973/2822 Test #973: itkNiftiReadAnalyzeTest ....................................................... Passed 0.04 sec Start 976: itkNrrdComplexImageReadTest 974/2822 Test #976: itkNrrdComplexImageReadTest ................................................... Passed 0.04 sec Start 977: itkNrrdComplexImageReadWriteTest 975/2822 Test #975: itkNrrdImageIOTest2 ........................................................... Passed 0.11 sec Start 978: itkNrrdCovariantVectorImageReadTest 976/2822 Test #977: itkNrrdComplexImageReadWriteTest .............................................. Passed 0.06 sec Start 979: itkNrrdCovariantVectorImageReadWriteTest 977/2822 Test #974: itkNrrdImageIOTest1 ........................................................... Passed 0.14 sec Start 980: itkNrrdDiffusionTensor3DImageReadTensorDoubleWriteTensorDouble 978/2822 Test #978: itkNrrdCovariantVectorImageReadTest ........................................... Passed 0.05 sec Start 981: itkNrrdDiffusionTensor3DImageReadTest1 979/2822 Test #979: itkNrrdCovariantVectorImageReadWriteTest ...................................... Passed 0.05 sec Start 982: itkNrrdDiffusionTensor3DImageReadTest2 980/2822 Test #980: itkNrrdDiffusionTensor3DImageReadTensorDoubleWriteTensorDouble ................ Passed 0.06 sec Start 983: itkNrrdDiffusionTensor3DImageReadTest3 981/2822 Test #982: itkNrrdDiffusionTensor3DImageReadTest2 ........................................ Passed 0.04 sec Start 984: itkNrrdDiffusionTensor3DImageReadWriteTest 982/2822 Test #981: itkNrrdDiffusionTensor3DImageReadTest1 ........................................ Passed 0.05 sec Start 985: itkNrrdDiffusionTensor3DImageReadWriteTest4 983/2822 Test #983: itkNrrdDiffusionTensor3DImageReadTest3 ........................................ Passed 0.04 sec Start 986: itkNrrdImageReadWriteTest1 984/2822 Test #912: itkMeshFileReadWriteTest11 .................................................... Passed 1.47 sec Start 987: itkNrrdImageReadWriteTest2 985/2822 Test #985: itkNrrdDiffusionTensor3DImageReadWriteTest4 ................................... Passed 0.05 sec Start 988: itkNrrdImageReadWriteTest3 986/2822 Test #984: itkNrrdDiffusionTensor3DImageReadWriteTest .................................... Passed 0.06 sec Start 989: itkNrrdImageReadWriteTest4 987/2822 Test #986: itkNrrdImageReadWriteTest1 .................................................... Passed 0.05 sec Start 990: itkNrrdImageReadWriteTest5 988/2822 Test #988: itkNrrdImageReadWriteTest3 .................................................... Passed 0.05 sec Start 991: itkNrrdImageReadWriteTest6 989/2822 Test #987: itkNrrdImageReadWriteTest2 .................................................... Passed 0.05 sec Start 992: itkNrrdImageReadWriteTest7 990/2822 Test #989: itkNrrdImageReadWriteTest4 .................................................... Passed 0.05 sec Start 993: itkNrrdImageReadWriteTest8 991/2822 Test #990: itkNrrdImageReadWriteTest5 .................................................... Passed 0.05 sec Start 994: itkNrrdImageReadWriteTest9 992/2822 Test #991: itkNrrdImageReadWriteTest6 .................................................... Passed 0.05 sec Start 995: itkNrrdImageReadWriteTest10 993/2822 Test #992: itkNrrdImageReadWriteTest7 .................................................... Passed 0.05 sec Start 996: itkNrrdImageReadWriteTest11 994/2822 Test #993: itkNrrdImageReadWriteTest8 .................................................... Passed 0.05 sec Start 997: itkNrrdRGBAImageReadWriteTest 995/2822 Test #994: itkNrrdImageReadWriteTest9 .................................................... Passed 0.07 sec Start 998: itkNrrdRGBImageReadWriteTest0 996/2822 Test #995: itkNrrdImageReadWriteTest10 ................................................... Passed 0.05 sec Start 999: itkNrrdRGBImageReadWriteTest1 997/2822 Test #996: itkNrrdImageReadWriteTest11 ................................................... Passed 0.06 sec Start 1000: itkNrrdRGBImageReadWriteTest2 998/2822 Test #997: itkNrrdRGBAImageReadWriteTest ................................................. Passed 0.08 sec Start 1001: itkNrrdVectorImageReadTest 999/2822 Test #998: itkNrrdRGBImageReadWriteTest0 ................................................. Passed 0.07 sec Start 1002: itkNrrdVectorImageReadWriteTest 1000/2822 Test #999: itkNrrdRGBImageReadWriteTest1 ................................................. Passed 0.07 sec Start 1003: itkNrrdMetaDataTest 1001/2822 Test #1000: itkNrrdRGBImageReadWriteTest2 ................................................. Passed 0.06 sec Start 1004: itkPNGImageIOTest1Grey 1002/2822 Test #1001: itkNrrdVectorImageReadTest .................................................... Passed 0.04 sec Start 1005: itkPNGImageIOTest1Color 1003/2822 Test #1003: itkNrrdMetaDataTest ........................................................... Passed 0.04 sec Start 1006: itkPNGImageIOTest1Palette 1004/2822 Test #1002: itkNrrdVectorImageReadWriteTest ............................................... Passed 0.08 sec Start 1007: itkPNGImageIOTest1Palette2Scalar 1005/2822 Test #1004: itkPNGImageIOTest1Grey ........................................................ Passed 0.09 sec Start 1008: itkPNGImageIOTest1PaletteExpanded 1006/2822 Test #1006: itkPNGImageIOTest1Palette ..................................................... Passed 0.05 sec Start 1009: itkPNGImageIOTest2GreyAlpha 1007/2822 Test #1005: itkPNGImageIOTest1Color ....................................................... Passed 0.10 sec Start 1010: itkPNGImageIOTest2Palette 1008/2822 Test #1007: itkPNGImageIOTest1Palette2Scalar .............................................. Passed 0.04 sec Start 1011: itkPNGImageIOTest3PaletteExpanded 1009/2822 Test #1008: itkPNGImageIOTest1PaletteExpanded ............................................. Passed 0.05 sec Start 1012: itkPNGImageIOTest3PaletteNotExpanded 1010/2822 Test #1011: itkPNGImageIOTest3PaletteExpanded ............................................. Passed 0.06 sec Start 1013: itkPNGImageIOTest3PaletteNotExpandedGrey 1011/2822 Test #1009: itkPNGImageIOTest2GreyAlpha ................................................... Passed 0.08 sec Start 1014: ITKIORAWInDoxygenGroup 1012/2822 Test #1010: itkPNGImageIOTest2Palette ..................................................... Passed 0.06 sec Start 1015: itkRawImageIOTest 1013/2822 Test #1012: itkPNGImageIOTest3PaletteNotExpanded .......................................... Passed 0.06 sec Start 1016: itkRawImageIOTest2 1014/2822 Test #1014: ITKIORAWInDoxygenGroup ........................................................ Passed 0.02 sec Start 1017: itkRawImageIOTest3 1015/2822 Test #1013: itkPNGImageIOTest3PaletteNotExpandedGrey ...................................... Passed 0.04 sec Start 1018: itkRawImageIOTest4 1016/2822 Test #1016: itkRawImageIOTest2 ............................................................ Passed 0.04 sec Start 1019: itkRawImageIOTest5 1017/2822 Test #1015: itkRawImageIOTest ............................................................. Passed 0.06 sec Start 1020: itkReadWriteSpatialObjectTest 1018/2822 Test #1017: itkRawImageIOTest3 ............................................................ Passed 0.05 sec Start 1021: itkReadWriteSpatialObjectTest1 1019/2822 Test #1018: itkRawImageIOTest4 ............................................................ Passed 0.04 sec Start 1022: itkReadWriteSpatialObjectTest2 1020/2822 Test #1019: itkRawImageIOTest5 ............................................................ Passed 0.04 sec Start 1023: itkPolygonGroupSpatialObjectXMLFileTest 1021/2822 Test #1021: itkReadWriteSpatialObjectTest1 ................................................ Passed 0.07 sec Start 1024: itkReadVesselTubeSpatialObjectTest 1022/2822 Test #1020: itkReadWriteSpatialObjectTest ................................................. Passed 0.07 sec Start 1025: itkStimulateImageIOTest 1023/2822 Test #1022: itkReadWriteSpatialObjectTest2 ................................................ Passed 0.06 sec Start 1026: itkStimulateImageIOTest2 1024/2822 Test #1023: itkPolygonGroupSpatialObjectXMLFileTest ....................................... Passed 0.05 sec Start 1027: itkTIFFImageIOTest 1025/2822 Test #1024: itkReadVesselTubeSpatialObjectTest ............................................ Passed 0.05 sec Start 1028: itkTIFFImageIOTest1 1026/2822 Test #1025: itkStimulateImageIOTest ....................................................... Passed 0.05 sec Start 1029: itkTIFFImageIOTest2 1027/2822 Test #1026: itkStimulateImageIOTest2 ...................................................... Passed 0.05 sec Start 1030: itkTIFFImageIOTest3 1028/2822 Test #1027: itkTIFFImageIOTest ............................................................ Passed 0.07 sec Start 1031: itkTIFFImageIOTest4 1029/2822 Test #1029: itkTIFFImageIOTest2 ........................................................... Passed 0.06 sec Start 1032: itkTIFFImageIOTest5 1030/2822 Test #1028: itkTIFFImageIOTest1 ........................................................... Passed 0.06 sec Start 1033: itkTIFFImageIOTest6 1031/2822 Test #1030: itkTIFFImageIOTest3 ........................................................... Passed 0.07 sec Start 1034: itkTIFFImageIOTest7 1032/2822 Test #1031: itkTIFFImageIOTest4 ........................................................... Passed 0.05 sec Start 1035: itkTIFFImageIOTest8 1033/2822 Test #1034: itkTIFFImageIOTest7 ........................................................... Passed 0.05 sec Start 1036: itkTIFFImageIOTest9 1034/2822 Test #1032: itkTIFFImageIOTest5 ........................................................... Passed 0.06 sec Start 1037: itkTIFFImageIOTest10 1035/2822 Test #1033: itkTIFFImageIOTest6 ........................................................... Passed 0.07 sec Start 1038: itkTIFFImageIOTest11 1036/2822 Test #1035: itkTIFFImageIOTest8 ........................................................... Passed 0.07 sec Start 1039: itkTIFFImageIOTest12 1037/2822 Test #1036: itkTIFFImageIOTest9 ........................................................... Passed 0.06 sec Start 1040: itkTIFFImageIOTest13 1038/2822 Test #1038: itkTIFFImageIOTest11 .......................................................... Passed 0.05 sec Start 1041: itkTIFFImageIOTest14 1039/2822 Test #1037: itkTIFFImageIOTest10 .......................................................... Passed 0.06 sec Start 1042: itkTIFFImageIOTest15 1040/2822 Test #1039: itkTIFFImageIOTest12 .......................................................... Passed 0.06 sec Start 1043: itkTIFFImageIOMultiPagesTest 1041/2822 Test #1042: itkTIFFImageIOTest15 .......................................................... Passed 0.05 sec Start 1044: itkTIFFImageIOMultiPagesTest2 1042/2822 Test #1040: itkTIFFImageIOTest13 .......................................................... Passed 0.07 sec Start 1045: itkTIFFImageIOMultResTest1 1043/2822 Test #1041: itkTIFFImageIOTest14 .......................................................... Passed 0.07 sec Start 1046: itkTIFFImageIOMultResTest2 1044/2822 Test #1043: itkTIFFImageIOMultiPagesTest .................................................. Passed 0.07 sec Start 1047: itkTIFFImageIOSpacing 1045/2822 Test #1044: itkTIFFImageIOMultiPagesTest2 ................................................. Passed 0.06 sec Start 1048: itkTIFFImageIOFloatTest 1046/2822 Test #1045: itkTIFFImageIOMultResTest1 .................................................... Passed 0.05 sec Start 1049: itkTIFFImageIORGBATest 1047/2822 Test #1046: itkTIFFImageIOMultResTest2 .................................................... Passed 0.05 sec Start 1050: itkTIFFImageIOOrientation1 1048/2822 Test #1047: itkTIFFImageIOSpacing ......................................................... Passed 0.04 sec Start 1051: itkTIFFImageIOOrientation2 1049/2822 Test #1050: itkTIFFImageIOOrientation1 .................................................... Passed 0.05 sec Start 1052: itkTIFFImageIOOrientation3 1050/2822 Test #1048: itkTIFFImageIOFloatTest ....................................................... Passed 0.06 sec Start 1053: itkTIFFImageIOOrientation4 1051/2822 Test #1049: itkTIFFImageIORGBATest ........................................................ Passed 0.08 sec Start 1054: itkTIFFImageIOPlannarConfig1 1052/2822 Test #1051: itkTIFFImageIOOrientation2 .................................................... Passed 0.08 sec Start 1055: itkTIFFImageIOPlannarConfig2 1053/2822 Test #1052: itkTIFFImageIOOrientation3 .................................................... Passed 0.05 sec Start 1056: itkTIFFImageIOInfoTest1 1054/2822 Test #1053: itkTIFFImageIOOrientation4 .................................................... Passed 0.05 sec Start 1057: itkTIFFImageIOInfoTest2 1055/2822 Test #1054: itkTIFFImageIOPlannarConfig1 .................................................. Passed 0.06 sec Start 1058: itkTIFFImageIOCompression_cthead1_NoCompression 1056/2822 Test #1055: itkTIFFImageIOPlannarConfig2 .................................................. Passed 0.06 sec Start 1059: itkTIFFImageIOCompression_cthead1_LZW 1057/2822 Test #1057: itkTIFFImageIOInfoTest2 ....................................................... Passed 0.04 sec Start 1060: itkTIFFImageIOCompression_cthead1_JPEG 1058/2822 Test #1056: itkTIFFImageIOInfoTest1 ....................................................... Passed 0.07 sec Start 1061: itkTIFFImageIOCompression_cthead1_PackBits 1059/2822 Test #1059: itkTIFFImageIOCompression_cthead1_LZW ......................................... Passed 0.04 sec Start 1062: itkTIFFImageIOCompression_RGBTestImageJPEG_NoCompression 1060/2822 Test #1058: itkTIFFImageIOCompression_cthead1_NoCompression ............................... Passed 0.06 sec Start 1063: itkTIFFImageIOCompression_RGBTestImageJPEG_LZW 1061/2822 Test #1060: itkTIFFImageIOCompression_cthead1_JPEG ........................................ Passed 0.07 sec Start 1064: itkTIFFImageIOCompression_RGBTestImageJPEG_JPEG 1062/2822 Test #1061: itkTIFFImageIOCompression_cthead1_PackBits .................................... Passed 0.05 sec Start 1065: itkTIFFImageIOCompression_RGBTestImageJPEG_PackBits 1063/2822 Test #1062: itkTIFFImageIOCompression_RGBTestImageJPEG_NoCompression ...................... Passed 0.05 sec Start 1066: itkTIFFImageIOCompression_cthead1_JPEG_1 1064/2822 Test #1063: itkTIFFImageIOCompression_RGBTestImageJPEG_LZW ................................ Passed 0.06 sec Start 1067: itkTIFFImageIOCompression_cthead1_JPEG_50 1065/2822 Test #1065: itkTIFFImageIOCompression_RGBTestImageJPEG_PackBits ........................... Passed 0.06 sec Start 1068: itkTIFFImageIOCompression_cthead1_JPEG_100 1066/2822 Test #1064: itkTIFFImageIOCompression_RGBTestImageJPEG_JPEG ............................... Passed 0.07 sec Start 1069: itkTIFFImageIOTestPaletteExpanded 1067/2822 Test #1066: itkTIFFImageIOCompression_cthead1_JPEG_1 ...................................... Passed 0.05 sec Start 1070: itkTIFFImageIOTestPaletteNotExpanded 1068/2822 Test #1067: itkTIFFImageIOCompression_cthead1_JPEG_50 ..................................... Passed 0.07 sec Start 1071: itkTIFFImageIOTestPaletteNotExpandedGrey 1069/2822 Test #1070: itkTIFFImageIOTestPaletteNotExpanded .......................................... Passed 0.05 sec Start 1072: ITKTransformFactoryInDoxygenGroup 1070/2822 Test #1069: itkTIFFImageIOTestPaletteExpanded ............................................. Passed 0.06 sec Start 1073: ITKIOTransformBaseInDoxygenGroup 1071/2822 Test #1068: itkTIFFImageIOCompression_cthead1_JPEG_100 .................................... Passed 0.07 sec Start 1074: itkTransformFileReaderTest 1072/2822 Test #1072: ITKTransformFactoryInDoxygenGroup ............................................. Passed 0.02 sec Start 1075: itkTransformFileWriterTest 1073/2822 Test #1073: ITKIOTransformBaseInDoxygenGroup .............................................. Passed 0.02 sec Start 1076: ITKIOTransformHDF5InDoxygenGroup 1074/2822 Test #1071: itkTIFFImageIOTestPaletteNotExpandedGrey ...................................... Passed 0.05 sec Start 1077: itkIOTransformHDF5Test 1075/2822 Test #1076: ITKIOTransformHDF5InDoxygenGroup .............................................. Passed 0.03 sec Start 1078: itkThinPlateTransformWriteReadTest 1076/2822 Test #1074: itkTransformFileReaderTest .................................................... Passed 0.08 sec Start 1079: ITKIOTransformInsightLegacyInDoxygenGroup 1077/2822 Test #1075: itkTransformFileWriterTest .................................................... Passed 0.06 sec Start 1080: itkIOTransformTxtTest 1078/2822 Test #1079: ITKIOTransformInsightLegacyInDoxygenGroup ..................................... Passed 0.02 sec Start 1081: itkIOTransformEuler3DTxtTest 1079/2822 Test #1080: itkIOTransformTxtTest ......................................................... Passed 0.06 sec Start 1082: ITKIOTransformMatlabInDoxygenGroup 1080/2822 Test #1078: itkThinPlateTransformWriteReadTest ............................................ Passed 0.10 sec Start 1083: itkIOTransformMatlabTest 1081/2822 Test #1081: itkIOTransformEuler3DTxtTest .................................................. Passed 0.06 sec Start 1084: itkVTKImageIO2Test 1082/2822 Test #1082: ITKIOTransformMatlabInDoxygenGroup ............................................ Passed 0.03 sec Start 1085: itkVTKImageIOTest 1083/2822 Test #1083: itkIOTransformMatlabTest ...................................................... Passed 0.06 sec Start 1086: itkVTKImageIO2Test2 1084/2822 Test #1086: itkVTKImageIO2Test2 ........................................................... Passed 0.04 sec Start 1087: itkVTKImageIOTest2 1085/2822 Test #1084: itkVTKImageIO2Test ............................................................ Passed 0.11 sec Start 1088: itkVTKImageIOStreamTest 1086/2822 Test #1087: itkVTKImageIOTest2 ............................................................ Passed 0.04 sec Start 1089: itkVTKImageIOFileReadTest 1087/2822 Test #1085: itkVTKImageIOTest ............................................................. Passed 0.15 sec Start 1090: itkDOMTest1 1088/2822 Test #1089: itkVTKImageIOFileReadTest ..................................................... Passed 0.04 sec Start 1091: itkDOMTest21 1089/2822 Test #1088: itkVTKImageIOStreamTest ....................................................... Passed 0.09 sec Start 1092: itkDOMTest22 1090/2822 Test #1090: itkDOMTest1 ................................................................... Passed 0.05 sec Start 1093: itkDOMTest3 1091/2822 Test #1091: itkDOMTest21 .................................................................. Passed 0.04 sec Start 1094: itkDOMTest4_01 1092/2822 Test #1077: itkIOTransformHDF5Test ........................................................ Passed 0.35 sec Start 1095: itkDOMTest4_02 1093/2822 Test #1093: itkDOMTest3 ................................................................... Passed 0.03 sec Start 1096: itkDOMTest4_03 1094/2822 Test #1092: itkDOMTest22 .................................................................. Passed 0.04 sec Start 1097: itkDOMTest4_04 1095/2822 Test #1094: itkDOMTest4_01 ................................................................ Passed 0.04 sec Start 1098: itkDOMTest4_05 1096/2822 Test #1095: itkDOMTest4_02 ................................................................ Passed 0.06 sec Start 1099: itkDOMTest4_06 1097/2822 Test #1096: itkDOMTest4_03 ................................................................ Passed 0.04 sec Start 1100: itkDOMTest4_07 1098/2822 Test #1097: itkDOMTest4_04 ................................................................ Passed 0.04 sec Start 1101: itkDOMTest4_08 1099/2822 Test #1098: itkDOMTest4_05 ................................................................ Passed 0.06 sec Start 1102: itkDOMTest4_09 1100/2822 Test #1099: itkDOMTest4_06 ................................................................ Passed 0.04 sec Start 1103: itkDOMTest4_10 1101/2822 Test #1100: itkDOMTest4_07 ................................................................ Passed 0.04 sec Start 1104: itkDOMTest4_11 1102/2822 Test #1101: itkDOMTest4_08 ................................................................ Passed 0.04 sec Start 1105: itkDOMTest4_12 1103/2822 Test #1102: itkDOMTest4_09 ................................................................ Passed 0.04 sec Start 1106: itkDOMTest4_13 1104/2822 Test #1103: itkDOMTest4_10 ................................................................ Passed 0.04 sec Start 1107: itkDOMTest4_14 1105/2822 Test #1104: itkDOMTest4_11 ................................................................ Passed 0.05 sec Start 1108: itkDOMTest4_15 1106/2822 Test #1105: itkDOMTest4_12 ................................................................ Passed 0.04 sec Start 1109: itkDOMTest4_16 1107/2822 Test #1106: itkDOMTest4_13 ................................................................ Passed 0.06 sec Start 1110: itkDOMTest4_17 1108/2822 Test #1107: itkDOMTest4_14 ................................................................ Passed 0.05 sec Start 1111: itkDOMTest4_18 1109/2822 Test #1108: itkDOMTest4_15 ................................................................ Passed 0.04 sec Start 1112: itkDOMTest4_19 1110/2822 Test #1109: itkDOMTest4_16 ................................................................ Passed 0.04 sec Start 1113: itkDOMTest4_20 1111/2822 Test #1111: itkDOMTest4_18 ................................................................ Passed 0.03 sec Start 1114: itkDOMTest4_21 1112/2822 Test #1110: itkDOMTest4_17 ................................................................ Passed 0.04 sec Start 1115: itkDOMTest4_22 1113/2822 Test #1112: itkDOMTest4_19 ................................................................ Passed 0.04 sec Start 1116: itkDOMTest4_23 1114/2822 Test #1113: itkDOMTest4_20 ................................................................ Passed 0.04 sec Start 1117: itkDOMTest4_24 1115/2822 Test #1114: itkDOMTest4_21 ................................................................ Passed 0.05 sec Start 1118: itkDOMTest5 1116/2822 Test #1115: itkDOMTest4_22 ................................................................ Passed 0.05 sec Start 1119: itkDOMTest6 1117/2822 Test #1116: itkDOMTest4_23 ................................................................ Passed 0.05 sec Start 1120: itkDOMTest7 1118/2822 Test #1117: itkDOMTest4_24 ................................................................ Passed 0.06 sec Start 1121: itkDOMTest8 1119/2822 Test #1118: itkDOMTest5 ................................................................... Passed 0.05 sec Start 1122: itkNthElementPixelAccessorTest 1120/2822 Test #1119: itkDOMTest6 ................................................................... Passed 0.05 sec Start 1123: itkImageAdaptorTest 1121/2822 Test #1120: itkDOMTest7 ................................................................... Passed 0.04 sec Start 1124: itkRGBToVectorImageAdaptorTest 1122/2822 Test #1121: itkDOMTest8 ................................................................... Passed 0.05 sec Start 1125: itkVectorImageTest 1123/2822 Test #1123: itkImageAdaptorTest ........................................................... Passed 0.05 sec Start 1126: itkComplexConjugateImageAdaptorTest 1124/2822 Test #1122: itkNthElementPixelAccessorTest ................................................ Passed 0.06 sec Start 1127: itkVectorImageToImageAdaptorTest 1125/2822 Test #1124: itkRGBToVectorImageAdaptorTest ................................................ Passed 0.07 sec Start 1128: itkAbsoluteValueDifferenceImageFilterTest 1126/2822 Test #1126: itkComplexConjugateImageAdaptorTest ........................................... Passed 0.04 sec Start 1129: itkSquaredDifferenceImageFilterTest 1127/2822 Test #1125: itkVectorImageTest ............................................................ Passed 0.07 sec Start 1130: itkCheckerBoardImageFilterTest 1128/2822 Test #1127: itkVectorImageToImageAdaptorTest .............................................. Passed 0.06 sec Start 1131: itkConstrainedValueDifferenceImageFilterTest 1129/2822 Test #1129: itkSquaredDifferenceImageFilterTest ........................................... Passed 0.05 sec Start 1132: itkSimilarityIndexImageFilterTest 1130/2822 Test #1128: itkAbsoluteValueDifferenceImageFilterTest ..................................... Passed 0.06 sec Start 1133: itkSTAPLEImageFilterTest 1131/2822 Test #1131: itkConstrainedValueDifferenceImageFilterTest .................................. Passed 0.04 sec Start 1134: itkTestingComparisonImageFilterTest 1132/2822 Test #1130: itkCheckerBoardImageFilterTest ................................................ Passed 0.06 sec Start 1135: itkCompose2DCovariantVectorImageFilterTest 1133/2822 Test #1132: itkSimilarityIndexImageFilterTest ............................................. Passed 0.05 sec Start 1136: itkCompose3DVectorImageFilterTest 1134/2822 Test #1134: itkTestingComparisonImageFilterTest ........................................... Passed 0.05 sec Start 1137: itkCompose3DCovariantVectorImageFilterTest 1135/2822 Test #1135: itkCompose2DCovariantVectorImageFilterTest .................................... Passed 0.05 sec Start 1138: itkCompose2DVectorImageFilterTest 1136/2822 Test #1136: itkCompose3DVectorImageFilterTest ............................................. Passed 0.05 sec Start 1139: itkComposeRGBImageFilterTest 1137/2822 Test #1133: itkSTAPLEImageFilterTest ...................................................... Passed 0.10 sec Start 1140: itkImageToVectorImageFilterTest 1138/2822 Test #1137: itkCompose3DCovariantVectorImageFilterTest .................................... Passed 0.04 sec Start 1141: itkImageReadRealAndImaginaryWriteComplexTest 1139/2822 Test #1138: itkCompose2DVectorImageFilterTest ............................................. Passed 0.04 sec Start 1142: itkComposeRGBAImageFilterTest 1140/2822 Test #1139: itkComposeRGBImageFilterTest .................................................. Passed 0.04 sec Start 1143: itkJoinSeriesImageFilterTest 1141/2822 Test #1140: itkImageToVectorImageFilterTest ............................................... Passed 0.08 sec Start 1144: itkJoinSeriesImageFilterStreamingTest 1142/2822 Test #1141: itkImageReadRealAndImaginaryWriteComplexTest .................................. Passed 0.05 sec Start 1145: itkJoinImageFilterTest 1143/2822 Test #1143: itkJoinSeriesImageFilterTest .................................................. Passed 0.05 sec Start 1146: itkZeroCrossingBasedEdgeDetectionImageFilterTest 1144/2822 Test #1142: itkComposeRGBAImageFilterTest ................................................. Passed 0.06 sec Start 1147: itkLaplacianImageFilterTest 1145/2822 Test #1145: itkJoinImageFilterTest ........................................................ Passed 0.05 sec Start 1148: itkSobelEdgeDetectionImageFilterTest 1146/2822 Test #1147: itkLaplacianImageFilterTest ................................................... Passed 0.06 sec Start 1149: itkUnsharpMaskImageFilterTestSimple 1147/2822 Test #1146: itkZeroCrossingBasedEdgeDetectionImageFilterTest .............................. Passed 0.08 sec Start 1150: itkUnsharpMaskImageFilterTest_DefaultsUChar 1148/2822 Test #1148: itkSobelEdgeDetectionImageFilterTest .......................................... Passed 0.05 sec Start 1151: itkUnsharpMaskImageFilterTest_DefaultsFloat 1149/2822 Test #1149: itkUnsharpMaskImageFilterTestSimple ........................................... Passed 0.05 sec Start 1152: itkUnsharpMaskImageFilterTest_3_3_15 1150/2822 Test #1150: itkUnsharpMaskImageFilterTest_DefaultsUChar ................................... Passed 0.06 sec Start 1153: itkHessian3DToVesselnessMeasureImageFilterTest 1151/2822 Test #1144: itkJoinSeriesImageFilterStreamingTest ......................................... Passed 0.15 sec Start 1154: itkHessianToObjectnessMeasureImageFilterTest 1152/2822 Test #1151: itkUnsharpMaskImageFilterTest_DefaultsFloat ................................... Passed 0.05 sec Start 1155: itkHessianToObjectnessMeasureImageFilterTest2 1153/2822 Test #1152: itkUnsharpMaskImageFilterTest_3_3_15 .......................................... Passed 0.06 sec Start 1156: itkHessianRecursiveGaussianFilterScaleSpaceTest 1154/2822 Test #1153: itkHessian3DToVesselnessMeasureImageFilterTest ................................ Passed 0.07 sec Start 1157: itkHessianRecursiveGaussianFilterTest 1155/2822 Test #1154: itkHessianToObjectnessMeasureImageFilterTest .................................. Passed 0.07 sec Start 1158: itkHoughTransform2DCirclesImageTest 1156/2822 Test #1155: itkHessianToObjectnessMeasureImageFilterTest2 ................................. Passed 0.09 sec Start 1159: itkHoughTransform2DLinesImageTest 1157/2822 Test #1157: itkHessianRecursiveGaussianFilterTest ......................................... Passed 0.06 sec Start 1160: itkCannyEdgeDetectionImageFilterTest 1158/2822 Test #1159: itkHoughTransform2DLinesImageTest ............................................. Passed 0.10 sec Start 1161: itkBilateralImageFilterTest 1159/2822 Test #1158: itkHoughTransform2DCirclesImageTest ........................................... Passed 0.14 sec Start 1162: itkBilateralImageFilterTest2 1160/2822 Test #1160: itkCannyEdgeDetectionImageFilterTest .......................................... Passed 0.13 sec Start 1163: itkBilateralImageFilterTest3 1161/2822 Test #1161: itkBilateralImageFilterTest ................................................... Passed 0.10 sec Start 1164: itkGradientVectorFlowImageFilterTest 1162/2822 Test #1162: itkBilateralImageFilterTest2 .................................................. Passed 0.13 sec Start 1165: itkSimpleContourExtractorImageFilterTest 1163/2822 Test #1164: itkGradientVectorFlowImageFilterTest .......................................... Passed 0.11 sec Start 1166: itkZeroCrossingImageFilterTest 1164/2822 Test #1165: itkSimpleContourExtractorImageFilterTest ...................................... Passed 0.07 sec Start 1167: itkCannyEdgeDetectionImageFilterTest2 1165/2822 Test #1166: itkZeroCrossingImageFilterTest ................................................ Passed 0.05 sec Start 1168: itkDerivativeImageFilterTest1x 1166/2822 Test #1163: itkBilateralImageFilterTest3 .................................................. Passed 0.27 sec Start 1169: itkDerivativeImageFilterTest1y 1167/2822 Test #1168: itkDerivativeImageFilterTest1x ................................................ Passed 0.10 sec Start 1170: itkDerivativeImageFilterTest2x 1168/2822 Test #1169: itkDerivativeImageFilterTest1y ................................................ Passed 0.06 sec Start 1171: itkDerivativeImageFilterTest2y 1169/2822 Test #1170: itkDerivativeImageFilterTest2x ................................................ Passed 0.07 sec Start 1172: itkLaplacianRecursiveGaussianImageFilterTest 1170/2822 Test #1171: itkDerivativeImageFilterTest2y ................................................ Passed 0.07 sec Start 1173: itkMaskFeaturePointSelectionFilterTest 1171/2822 Test #1167: itkCannyEdgeDetectionImageFilterTest2 ......................................... Passed 0.25 sec Start 1174: itkGradientVectorFlowImageFilterPythonTest 1172/2822 Test #1172: itkLaplacianRecursiveGaussianImageFilterTest .................................. Passed 0.12 sec Start 1175: itkNeighborhoodOperatorImageFilterTest 1173/2822 Test #1175: itkNeighborhoodOperatorImageFilterTest ........................................ Passed 0.11 sec Start 1176: itkImageToImageFilterTest 1174/2822 Test #1173: itkMaskFeaturePointSelectionFilterTest ........................................ Passed 0.25 sec Start 1177: itkVectorNeighborhoodOperatorImageFilterTest 1175/2822 Test #1176: itkImageToImageFilterTest ..................................................... Passed 0.05 sec Start 1178: itkMaskNeighborhoodOperatorImageFilterTest 1176/2822 Test #1177: itkVectorNeighborhoodOperatorImageFilterTest .................................. Passed 0.05 sec Start 1179: itkCastImageFilterTest 1177/2822 Test #1178: itkMaskNeighborhoodOperatorImageFilterTest .................................... Passed 0.10 sec Start 1180: itkGaussianBlurImageFunctionTest 1178/2822 Test #1156: itkHessianRecursiveGaussianFilterScaleSpaceTest ............................... Passed 1.02 sec Start 1181: itkVectorInterpolateImageFunctionTest 1179/2822 Test #1180: itkGaussianBlurImageFunctionTest .............................................. Passed 0.06 sec Start 1182: itkVarianceImageFunctionTest 1180/2822 Test #1181: itkVectorInterpolateImageFunctionTest ......................................... Passed 0.04 sec Start 1183: itkMedianImageFunctionTest 1181/2822 Test #1182: itkVarianceImageFunctionTest .................................................. Passed 0.04 sec Start 1184: itkBinaryThresholdImageFunctionTest 1182/2822 Test #1183: itkMedianImageFunctionTest .................................................... Passed 0.04 sec Start 1185: itkBSplineDecompositionImageFilterTest 1183/2822 Test #1184: itkBinaryThresholdImageFunctionTest ........................................... Passed 0.04 sec Start 1186: itkBSplineInterpolateImageFunctionTest 1184/2822 Test #1185: itkBSplineDecompositionImageFilterTest ........................................ Passed 0.05 sec Start 1187: itkBSplineResampleImageFunctionTest 1185/2822 Test #1187: itkBSplineResampleImageFunctionTest ........................................... Passed 0.04 sec Start 1188: itkScatterMatrixImageFunctionTest 1186/2822 Test #1188: itkScatterMatrixImageFunctionTest ............................................. Passed 0.04 sec Start 1189: itkMeanImageFunctionTest 1187/2822 Test #1186: itkBSplineInterpolateImageFunctionTest ........................................ Passed 0.14 sec Start 1190: itkGaussianDerivativeImageFunctionTest 1188/2822 Test #1179: itkCastImageFilterTest ........................................................***Failed 0.33 sec itkCastImageFilterTest Start Casting from char to char ... [PASSED] Casting from char to unsigned char ... [PASSED] Casting from char to short ... [PASSED] Casting from char to unsigned short ... [PASSED] Casting from char to int ... [PASSED] Casting from char to unsigned int ... [PASSED] Casting from char to long ... [PASSED] Casting from char to unsigned long ... [PASSED] Casting from char to long long ... [PASSED] Casting from char to unsigned long long ... [PASSED] Casting from char to float ... [PASSED] Casting from char to double ... [PASSED] Casting from unsigned char to char ... [PASSED] Casting from unsigned char to unsigned char ... [PASSED] Casting from unsigned char to short ... [PASSED] Casting from unsigned char to unsigned short ... [PASSED] Casting from unsigned char to int ... [PASSED] Casting from unsigned char to unsigned int ... [PASSED] Casting from unsigned char to long ... [PASSED] Casting from unsigned char to unsigned long ... [PASSED] Casting from unsigned char to long long ... [PASSED] Casting from unsigned char to unsigned long long ... [PASSED] Casting from unsigned char to float ... [PASSED] Casting from unsigned char to double ... [PASSED] Casting from short to char ... [PASSED] Casting from short to unsigned char ... [PASSED] Casting from short to short ... [PASSED] Casting from short to unsigned short ... [PASSED] Casting from short to int ... [PASSED] Casting from short to unsigned int ... [PASSED] Casting from short to long ... [PASSED] Casting from short to unsigned long ... [PASSED] Casting from short to long long ... [PASSED] Casting from short to unsigned long long ... [PASSED] Casting from short to float ... [PASSED] Casting from short to double ... [PASSED] Casting from unsigned short to char ... [PASSED] Casting from unsigned short to unsigned char ... [PASSED] Casting from unsigned short to short ... [PASSED] Casting from unsigned short to unsigned short ... [PASSED] Casting from unsigned short to int ... [PASSED] Casting from unsigned short to unsigned int ... [PASSED] Casting from unsigned short to long ... [PASSED] Casting from unsigned short to unsigned long ... [PASSED] Casting from unsigned short to long long ... [PASSED] Casting from unsigned short to unsigned long long ... [PASSED] Casting from unsigned short to float ... [PASSED] Casting from unsigned short to double ... [PASSED] Casting from int to char ... [PASSED] Casting from int to unsigned char ... [PASSED] Casting from int to short ... [PASSED] Casting from int to unsigned short ... [PASSED] Casting from int to int ... [PASSED] Casting from int to unsigned int ... [PASSED] Casting from int to long ... [PASSED] Casting from int to unsigned long ... [PASSED] Casting from int to long long ... [PASSED] Casting from int to unsigned long long ... [PASSED] Casting from int to float ... [PASSED] Casting from int to double ... [PASSED] Casting from unsigned int to char ... [PASSED] Casting from unsigned int to unsigned char ... [PASSED] Casting from unsigned int to short ... [PASSED] Casting from unsigned int to unsigned short ... [PASSED] Casting from unsigned int to int ... [PASSED] Casting from unsigned int to unsigned int ... [PASSED] Casting from unsigned int to long ... [PASSED] Casting from unsigned int to unsigned long ... [PASSED] Casting from unsigned int to long long ... [PASSED] Casting from unsigned int to unsigned long long ... [PASSED] Casting from unsigned int to float ... [PASSED] Casting from unsigned int to double ... [PASSED] Casting from long to char ... [PASSED] Casting from long to unsigned char ... [PASSED] Casting from long to short ... [PASSED] Casting from long to unsigned short ... [PASSED] Casting from long to int ... [PASSED] Casting from long to unsigned int ... [PASSED] Casting from long to long ... [PASSED] Casting from long to unsigned long ... [PASSED] Casting from long to long long ... [PASSED] Casting from long to unsigned long long ... [PASSED] Casting from long to float ... [PASSED] Casting from long to double ... [PASSED] Casting from unsigned long to char ... [PASSED] Casting from unsigned long to unsigned char ... [PASSED] Casting from unsigned long to short ... [PASSED] Casting from unsigned long to unsigned short ... [PASSED] Casting from unsigned long to int ... [PASSED] Casting from unsigned long to unsigned int ... [PASSED] Casting from unsigned long to long ... [PASSED] Casting from unsigned long to unsigned long ... [PASSED] Casting from unsigned long to long long ... [PASSED] Casting from unsigned long to unsigned long long ... [PASSED] Casting from unsigned long to float ... [PASSED] Casting from unsigned long to double ... [PASSED] Casting from long long to char ... [PASSED] Casting from long long to unsigned char ... [PASSED] Casting from long long to short ... [PASSED] Casting from long long to unsigned short ... [PASSED] Casting from long long to int ... [PASSED] Casting from long long to unsigned int ... [PASSED] Casting from long long to long ... [PASSED] Casting from long long to unsigned long ... [PASSED] Casting from long long to long long ... [PASSED] Casting from long long to unsigned long long ... [PASSED] Casting from long long to float ... [PASSED] Casting from long long to double ... [PASSED] Casting from unsigned long long to char ... [PASSED] Casting from unsigned long long to unsigned char ... [PASSED] Casting from unsigned long long to short ... [PASSED] Casting from unsigned long long to unsigned short ... [PASSED] Casting from unsigned long long to int ... [PASSED] Casting from unsigned long long to unsigned int ... [PASSED] Casting from unsigned long long to long ... [PASSED] Casting from unsigned long long to unsigned long ... [PASSED] Casting from unsigned long long to long long ... [PASSED] Casting from unsigned long long to unsigned long long ... [PASSED] Casting from unsigned long long to float ... [PASSED] Casting from unsigned long long to double ... [PASSED] Casting from float to char ... [PASSED] Casting from float to unsigned char ... [PASSED] Casting from float to short ... [FAILED] An itkCastImageFilter test FAILED. Start 1191: itkCentralDifferenceImageFunctionTest 1189/2822 Test #1189: itkMeanImageFunctionTest ...................................................... Passed 0.04 sec Start 1192: itkCentralDifferenceImageFunctionOnVectorTest 1190/2822 Test #1190: itkGaussianDerivativeImageFunctionTest ........................................ Passed 0.04 sec Start 1193: itkImageAdaptorInterpolateImageFunctionTest 1191/2822 Test #1191: itkCentralDifferenceImageFunctionTest ......................................... Passed 0.04 sec Start 1194: itkCovarianceImageFunctionTest 1192/2822 Test #1193: itkImageAdaptorInterpolateImageFunctionTest ................................... Passed 0.05 sec Start 1195: itkRayCastInterpolateImageFunctionTest 1193/2822 Test #1192: itkCentralDifferenceImageFunctionOnVectorTest ................................. Passed 0.07 sec Start 1196: itkNearestNeighborExtrapolateImageFunctionTest 1194/2822 Test #1194: itkCovarianceImageFunctionTest ................................................ Passed 0.05 sec Start 1197: itkVectorMeanImageFunctionTest 1195/2822 Test #1195: itkRayCastInterpolateImageFunctionTest ........................................ Passed 0.04 sec Start 1198: itkMahalanobisDistanceThresholdImageFunctionTest 1196/2822 Test #1196: itkNearestNeighborExtrapolateImageFunctionTest ................................ Passed 0.04 sec Start 1199: itkInterpolateTest 1197/2822 Test #1197: itkVectorMeanImageFunctionTest ................................................ Passed 0.04 sec Start 1200: itkRGBInterpolateImageFunctionTest 1198/2822 Test #1198: itkMahalanobisDistanceThresholdImageFunctionTest .............................. Passed 0.04 sec Start 1201: itkWindowedSincInterpolateImageFunctionTest 1199/2822 Test #1199: itkInterpolateTest ............................................................ Passed 0.04 sec Start 1202: itkLinearInterpolateImageFunctionTest 1200/2822 Test #1200: itkRGBInterpolateImageFunctionTest ............................................ Passed 0.04 sec Start 1203: itkNeighborhoodOperatorImageFunctionTest 1201/2822 Test #1201: itkWindowedSincInterpolateImageFunctionTest ................................... Passed 0.04 sec Start 1204: itkNearestNeighborInterpolateImageFunctionTest 1202/2822 Test #1203: itkNeighborhoodOperatorImageFunctionTest ...................................... Passed 0.04 sec Start 1205: itkGaussianInterpolateImageFunctionTest 1203/2822 Test #1204: itkNearestNeighborInterpolateImageFunctionTest ................................ Passed 0.04 sec Start 1206: itkLabelImageGaussianInterpolateImageFunctionTest 1204/2822 Test #1206: itkLabelImageGaussianInterpolateImageFunctionTest ............................. Passed 0.04 sec Start 1207: itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest 1205/2822 Test #1207: itkVectorLinearInterpolateNearestNeighborExtrapolateImageFunctionTest ......... Passed 0.04 sec Start 1208: ITKImageFusionInDoxygenGroup 1206/2822 Test #1208: ITKImageFusionInDoxygenGroup .................................................. Passed 0.02 sec Start 1209: itkScalarToRGBPixelFunctorTest 1207/2822 Test #1209: itkScalarToRGBPixelFunctorTest ................................................ Passed 0.07 sec Start 1210: itkLabelOverlayImageFilterTest-Opacity-0_0 1208/2822 Test #1202: itkLinearInterpolateImageFunctionTest ......................................... Passed 0.28 sec Start 1211: itkLabelOverlayImageFilterTest-Opacity-0_1 1209/2822 Test #1205: itkGaussianInterpolateImageFunctionTest ....................................... Passed 0.26 sec Start 1212: itkLabelOverlayImageFilterTest-Opacity-0_2 1210/2822 Test #1210: itkLabelOverlayImageFilterTest-Opacity-0_0 .................................... Passed 0.10 sec Start 1213: itkLabelOverlayImageFilterTest-Opacity-0_3 1211/2822 Test #1212: itkLabelOverlayImageFilterTest-Opacity-0_2 .................................... Passed 0.08 sec Start 1214: itkLabelOverlayImageFilterTest-Opacity-0_4 1212/2822 Test #1211: itkLabelOverlayImageFilterTest-Opacity-0_1 .................................... Passed 0.11 sec Start 1215: itkLabelOverlayImageFilterTest-Opacity-0_5 1213/2822 Test #1213: itkLabelOverlayImageFilterTest-Opacity-0_3 .................................... Passed 0.08 sec Start 1216: itkLabelOverlayImageFilterTest-Opacity-0_6 1214/2822 Test #1214: itkLabelOverlayImageFilterTest-Opacity-0_4 .................................... Passed 0.10 sec Start 1217: itkLabelOverlayImageFilterTest-Opacity-0_7 1215/2822 Test #1215: itkLabelOverlayImageFilterTest-Opacity-0_5 .................................... Passed 0.10 sec Start 1218: itkLabelOverlayImageFilterTest-Opacity-0_8 1216/2822 Test #1216: itkLabelOverlayImageFilterTest-Opacity-0_6 .................................... Passed 0.09 sec Start 1219: itkLabelOverlayImageFilterTest-Opacity-0_9 1217/2822 Test #1218: itkLabelOverlayImageFilterTest-Opacity-0_8 .................................... Passed 0.08 sec Start 1220: itkLabelOverlayImageFilterTest-Opacity-1_0 1218/2822 Test #1217: itkLabelOverlayImageFilterTest-Opacity-0_7 .................................... Passed 0.10 sec Start 1221: itkLabelToRGBImageFilterTest 1219/2822 Test #1219: itkLabelOverlayImageFilterTest-Opacity-0_9 .................................... Passed 0.08 sec Start 1222: itkLabelMapToRGBImageFilterTest1 1220/2822 Test #1221: itkLabelToRGBImageFilterTest .................................................. Passed 0.07 sec Start 1223: itkLabelMapToRGBImageFilterTest2 1221/2822 Test #1220: itkLabelOverlayImageFilterTest-Opacity-1_0 .................................... Passed 0.08 sec Start 1224: itkLabelMapContourOverlayImageFilterTest0 1222/2822 Test #1222: itkLabelMapToRGBImageFilterTest1 .............................................. Passed 0.07 sec Start 1225: itkLabelMapContourOverlayImageFilterTest1 1223/2822 Test #1223: itkLabelMapToRGBImageFilterTest2 .............................................. Passed 0.07 sec Start 1226: itkLabelMapContourOverlayImageFilterTest2 1224/2822 Test #1224: itkLabelMapContourOverlayImageFilterTest0 ..................................... Passed 0.09 sec Start 1227: itkLabelMapContourOverlayImageFilterTest3 1225/2822 Test #1225: itkLabelMapContourOverlayImageFilterTest1 ..................................... Passed 0.10 sec Start 1228: itkLabelMapContourOverlayImageFilterTest4 1226/2822 Test #1228: itkLabelMapContourOverlayImageFilterTest4 ..................................... Passed 0.09 sec Start 1229: itkLabelMapOverlayImageFilterTest1 1227/2822 Test #1229: itkLabelMapOverlayImageFilterTest1 ............................................ Passed 0.09 sec Start 1230: itkLabelMapOverlayImageFilterTest2 1228/2822 Test #1230: itkLabelMapOverlayImageFilterTest2 ............................................ Passed 0.09 sec Start 1231: itkLabelMapOverlayImageFilterTest3 1229/2822 Test #1231: itkLabelMapOverlayImageFilterTest3 ............................................ Passed 0.09 sec Start 1232: itkGradientImageFilterTest 1230/2822 Test #1232: itkGradientImageFilterTest .................................................... Passed 0.09 sec Start 1233: itkGradientImageFilterTest2 1231/2822 Test #1233: itkGradientImageFilterTest2 ................................................... Passed 0.08 sec Start 1234: itkVectorGradientMagnitudeImageFilterTest1a 1232/2822 Test #1234: itkVectorGradientMagnitudeImageFilterTest1a ................................... Passed 0.06 sec Start 1235: itkVectorGradientMagnitudeImageFilterTest1b 1233/2822 Test #1235: itkVectorGradientMagnitudeImageFilterTest1b ................................... Passed 0.09 sec Start 1236: itkVectorGradientMagnitudeImageFilterTest2 1234/2822 Test #1236: itkVectorGradientMagnitudeImageFilterTest2 .................................... Passed 0.06 sec Start 1237: itkVectorGradientMagnitudeImageFilterTest2b 1235/2822 Test #1237: itkVectorGradientMagnitudeImageFilterTest2b ................................... Passed 0.07 sec Start 1238: itkGradientMagnitudeImageFilterTest 1236/2822 Test #1238: itkGradientMagnitudeImageFilterTest ........................................... Passed 0.04 sec Start 1239: itkVectorGradientMagnitudeImageFilterTest3 1237/2822 Test #1239: itkVectorGradientMagnitudeImageFilterTest3 .................................... Passed 0.08 sec Start 1240: itkGradientMagnitudeRecursiveGaussianFilterTest 1238/2822 Test #1227: itkLabelMapContourOverlayImageFilterTest3 ..................................... Passed 1.00 sec Start 1241: itkGradientRecursiveGaussianFilterTest 1239/2822 Test #1240: itkGradientMagnitudeRecursiveGaussianFilterTest ............................... Passed 0.06 sec Start 1242: itkGradientRecursiveGaussianFilterTest2 1240/2822 Test #1241: itkGradientRecursiveGaussianFilterTest ........................................ Passed 0.07 sec Start 1243: itkGradientRecursiveGaussianFilterTest3 1241/2822 Test #1242: itkGradientRecursiveGaussianFilterTest2 ....................................... Passed 0.05 sec Start 1244: itkGradientRecursiveGaussianFilterTest4 1242/2822 Test #1244: itkGradientRecursiveGaussianFilterTest4 ....................................... Passed 0.09 sec Start 1245: itkDifferenceOfGaussiansGradientTest 1243/2822 Test #1243: itkGradientRecursiveGaussianFilterTest3 ....................................... Passed 0.16 sec Start 1246: itkBasicArchitectureTest 1244/2822 Test #1245: itkDifferenceOfGaussiansGradientTest .......................................... Passed 0.06 sec Start 1247: itkBinShrinkImageFilterTest1 1245/2822 Test #1246: itkBasicArchitectureTest ...................................................... Passed 0.07 sec Start 1248: itkBinShrinkImageFilterTest2 1246/2822 Test #1248: itkBinShrinkImageFilterTest2 .................................................. Passed 0.15 sec Start 1249: itkBSplineScatteredDataPointSetToImageFilterTest01 1247/2822 Test #1226: itkLabelMapContourOverlayImageFilterTest2 ..................................... Passed 1.48 sec Start 1250: itkBSplineScatteredDataPointSetToImageFilterTest02 1248/2822 Test #1247: itkBinShrinkImageFilterTest1 .................................................. Passed 0.28 sec Start 1251: itkBSplineScatteredDataPointSetToImageFilterTest03 1249/2822 Test #1250: itkBSplineScatteredDataPointSetToImageFilterTest02 ............................ Passed 0.08 sec Start 1252: itkBSplineScatteredDataPointSetToImageFilterTest04 1250/2822 Test #1249: itkBSplineScatteredDataPointSetToImageFilterTest01 ............................ Passed 0.13 sec Start 1253: itkBSplineScatteredDataPointSetToImageFilterTest05 1251/2822 Test #1251: itkBSplineScatteredDataPointSetToImageFilterTest03 ............................ Passed 0.09 sec Start 1254: itkBSplineControlPointImageFilterTest1 1252/2822 Test #1252: itkBSplineScatteredDataPointSetToImageFilterTest04 ............................ Passed 0.16 sec Start 1255: itkBSplineControlPointImageFilterTest2 1253/2822 Test #1254: itkBSplineControlPointImageFilterTest1 ........................................ Passed 0.09 sec Start 1256: itkBSplineControlPointImageFunctionTest 1254/2822 Test #1256: itkBSplineControlPointImageFunctionTest ....................................... Passed 0.05 sec Start 1257: itkChangeInformationImageFilterTest 1255/2822 Test #1257: itkChangeInformationImageFilterTest ........................................... Passed 0.04 sec Start 1258: itkConstantPadImageTest 1256/2822 Test #1253: itkBSplineScatteredDataPointSetToImageFilterTest05 ............................ Passed 0.27 sec Start 1259: itkCoxDeBoorBSplineKernelFunctionTest01 1257/2822 Test #1258: itkConstantPadImageTest ....................................................... Passed 0.09 sec Start 1260: itkCoxDeBoorBSplineKernelFunctionTest02 1258/2822 Test #1259: itkCoxDeBoorBSplineKernelFunctionTest01 ....................................... Passed 0.06 sec Start 1261: itkCyclicReferences 1259/2822 Test #1261: itkCyclicReferences ........................................................... Passed 0.04 sec Start 1262: itkCyclicShiftImageFilterTest0 1260/2822 Test #1260: itkCoxDeBoorBSplineKernelFunctionTest02 ....................................... Passed 0.08 sec Start 1263: itkCyclicShiftImageFilterTest1 1261/2822 Test #1262: itkCyclicShiftImageFilterTest0 ................................................ Passed 0.10 sec Start 1264: itkCyclicShiftImageFilterTest2 1262/2822 Test #1263: itkCyclicShiftImageFilterTest1 ................................................ Passed 0.08 sec Start 1265: itkCyclicShiftImageFilterTest3 1263/2822 Test #1264: itkCyclicShiftImageFilterTest2 ................................................ Passed 0.06 sec Start 1266: itkCyclicShiftImageFilterTest4 1264/2822 Test #1265: itkCyclicShiftImageFilterTest3 ................................................ Passed 0.08 sec Start 1267: itkCyclicShiftImageFilterTest5 1265/2822 Test #1266: itkCyclicShiftImageFilterTest4 ................................................ Passed 0.06 sec Start 1268: itkCyclicShiftImageFilterTest6 1266/2822 Test #1267: itkCyclicShiftImageFilterTest5 ................................................ Passed 0.07 sec Start 1269: itkInterpolateImagePointsFilterTest 1267/2822 Test #1268: itkCyclicShiftImageFilterTest6 ................................................ Passed 0.08 sec Start 1270: itkCropImageFilterTest 1268/2822 Test #1270: itkCropImageFilterTest ........................................................ Passed 0.04 sec Start 1271: itkCropImageFilter3DTest 1269/2822 Test #1271: itkCropImageFilter3DTest ...................................................... Passed 0.13 sec Start 1272: itkFlipImageFilterTest1 1270/2822 Test #1269: itkInterpolateImagePointsFilterTest ........................................... Passed 0.27 sec Start 1273: itkFlipImageFilterTest2 1271/2822 Test #1272: itkFlipImageFilterTest1 ....................................................... Passed 0.08 sec Start 1274: itkExpandImageFilterTest 1272/2822 Test #1273: itkFlipImageFilterTest2 ....................................................... Passed 0.05 sec Start 1275: itkRegionOfInterestImageFilterTest 1273/2822 Test #1274: itkExpandImageFilterTest ...................................................... Passed 0.05 sec Start 1276: itkBSplineUpsampleImageFilterTest 1274/2822 Test #755: itkFastMarchingImageFilterTest_wm_multipleSeeds_StrictTopo .................... Passed 13.59 sec Start 1277: itkBSplineResampleImageFilterTest 1275/2822 Test #1275: itkRegionOfInterestImageFilterTest ............................................ Passed 0.05 sec Start 1278: itkWarpImageFilterTest2 1276/2822 Test #1277: itkBSplineResampleImageFilterTest ............................................. Passed 0.07 sec Start 1279: itkBSplineDownsampleImageFilterTest 1277/2822 Test #1278: itkWarpImageFilterTest2 ....................................................... Passed 0.05 sec Start 1280: itkTileImageFilterTest 1278/2822 Test #1276: itkBSplineUpsampleImageFilterTest ............................................. Passed 0.13 sec Start 1281: itkInterpolateImageFilterTest 1279/2822 Test #1255: itkBSplineControlPointImageFilterTest2 ........................................ Passed 0.99 sec Start 1282: itkPasteImageFilterTest 1280/2822 Test #1279: itkBSplineDownsampleImageFilterTest ........................................... Passed 0.06 sec Start 1283: itkVectorResampleImageFilterTest 1281/2822 Test #1281: itkInterpolateImageFilterTest ................................................. Passed 0.06 sec Start 1284: itkPermuteAxesImageFilterTest 1282/2822 Test #1282: itkPasteImageFilterTest ....................................................... Passed 0.06 sec Start 1285: itkOrientedImage2DTest01 1283/2822 Test #1283: itkVectorResampleImageFilterTest .............................................. Passed 0.08 sec Start 1286: itkOrientedImage3DTest01 1284/2822 Test #1285: itkOrientedImage2DTest01 ...................................................... Passed 0.04 sec Start 1287: itkOrientedImageAdaptorTest 1285/2822 Test #1284: itkPermuteAxesImageFilterTest ................................................. Passed 0.06 sec Start 1288: itkOrientedImageProfileTest1 1286/2822 Test #1286: itkOrientedImage3DTest01 ...................................................... Passed 0.04 sec Start 1289: itkOrientedImageProfileTest2 1287/2822 Test #1287: itkOrientedImageAdaptorTest ................................................... Passed 0.04 sec Start 1290: itkOrientedImageProfileTest3 1288/2822 Test #1280: itkTileImageFilterTest ........................................................ Passed 0.25 sec Start 1291: itkOrientImageFilterTest 1289/2822 Test #1291: itkOrientImageFilterTest ...................................................... Passed 0.05 sec Start 1292: itkOrientImageFilterTest2 1290/2822 Test #1292: itkOrientImageFilterTest2 ..................................................... Passed 0.25 sec Start 1293: itkWarpImageFilterTest 1291/2822 Test #756: itkFastMarchingImageFilterTest_wm_multipleSeeds_NoHandlesTopo ................. Passed 13.89 sec Start 1294: itkWarpVectorImageFilterTest 1292/2822 Test #1293: itkWarpImageFilterTest ........................................................ Passed 0.07 sec Start 1295: itkWrapPadImageTest 1293/2822 Test #1294: itkWarpVectorImageFilterTest .................................................. Passed 0.10 sec Start 1296: itkMirrorPadImageTest 1294/2822 Test #1295: itkWrapPadImageTest ........................................................... Passed 0.05 sec Start 1297: itkResampleImageTest 1295/2822 Test #1296: itkMirrorPadImageTest ......................................................... Passed 0.06 sec Start 1298: itkResampleImageTest2 1296/2822 Test #1297: itkResampleImageTest .......................................................... Passed 0.06 sec Start 1299: itkResampleImageTest3 1297/2822 Test #1298: itkResampleImageTest2 ......................................................... Passed 0.08 sec Start 1300: itkResampleImageTest4 1298/2822 Test #1299: itkResampleImageTest3 ......................................................... Passed 0.11 sec Start 1301: itkResampleImageTest5 1299/2822 Test #1300: itkResampleImageTest4 ......................................................... Passed 0.06 sec Start 1302: itkResampleImageTest6 1300/2822 Test #1289: itkOrientedImageProfileTest2 .................................................. Passed 0.81 sec Start 1303: itkResamplePhasedArray3DSpecialCoordinatesImageTest 1301/2822 Test #1301: itkResampleImageTest5 ......................................................... Passed 0.17 sec Start 1304: itkPushPopTileImageFilterTest 1302/2822 Test #1303: itkResamplePhasedArray3DSpecialCoordinatesImageTest ........................... Passed 0.05 sec Start 1305: itkShrinkImageStreamingTest 1303/2822 Test #1305: itkShrinkImageStreamingTest ................................................... Passed 0.04 sec Start 1306: itkShrinkImageTest 1304/2822 Test #1288: itkOrientedImageProfileTest1 .................................................. Passed 0.94 sec Start 1307: itkZeroFluxNeumannPadImageFilterTest 1305/2822 Test #1302: itkResampleImageTest6 ......................................................... Passed 0.24 sec Start 1308: itkSliceBySliceImageFilterDimension0Test 1306/2822 Test #1290: itkOrientedImageProfileTest3 .................................................. Passed 0.93 sec Start 1309: itkSliceBySliceImageFilterDimension1Test 1307/2822 Test #1306: itkShrinkImageTest ............................................................ Passed 0.04 sec Start 1310: itkSliceBySliceImageFilterDimension2Test 1308/2822 Test #1307: itkZeroFluxNeumannPadImageFilterTest .......................................... Passed 0.05 sec Start 1311: itkPadImageFilterTest 1309/2822 Test #1311: itkPadImageFilterTest ......................................................... Passed 0.04 sec Start 1312: itkCosImageFilterAndAdaptorTest 1310/2822 Test #1312: itkCosImageFilterAndAdaptorTest ............................................... Passed 0.08 sec Start 1313: itkVectorRescaleIntensityImageFilterTest 1311/2822 Test #1313: itkVectorRescaleIntensityImageFilterTest ...................................... Passed 0.07 sec Start 1314: itkTernaryMagnitudeSquaredImageFilterTest 1312/2822 Test #1304: itkPushPopTileImageFilterTest ................................................. Passed 0.34 sec Start 1315: itkTernaryOperatorImageFilterTest 1313/2822 Test #1314: itkTernaryMagnitudeSquaredImageFilterTest ..................................... Passed 0.07 sec Start 1316: itkMinimumImageFilterTest 1314/2822 Test #1315: itkTernaryOperatorImageFilterTest ............................................. Passed 0.08 sec Start 1317: itkLog10ImageFilterAndAdaptorTest 1315/2822 Test #1316: itkMinimumImageFilterTest ..................................................... Passed 0.04 sec Start 1318: itkVectorIndexSelectionCastImageFilterTest1 1316/2822 Test #1318: itkVectorIndexSelectionCastImageFilterTest1 ................................... Passed 0.11 sec Start 1319: itkVectorIndexSelectionCastImageFilterTest2 1317/2822 Test #1317: itkLog10ImageFilterAndAdaptorTest ............................................. Passed 0.14 sec Start 1320: itkVectorIndexSelectionCastImageFilterTest3 1318/2822 Test #1320: itkVectorIndexSelectionCastImageFilterTest3 ................................... Passed 0.10 sec Start 1321: itkInvertIntensityImageFilterTest 1319/2822 Test #1319: itkVectorIndexSelectionCastImageFilterTest2 ................................... Passed 0.15 sec Start 1322: itkSymmetricEigenAnalysisImageFilterTestOrderByValue 1320/2822 Test #1322: itkSymmetricEigenAnalysisImageFilterTestOrderByValue .......................... Passed 0.08 sec Start 1323: itkSymmetricEigenAnalysisImageFilterTestOrderByMagnitude 1321/2822 Test #1321: itkInvertIntensityImageFilterTest ............................................. Passed 0.20 sec Start 1324: itkSymmetricEigenAnalysisImageFilterTestDoNotOrder 1322/2822 Test #1323: itkSymmetricEigenAnalysisImageFilterTestOrderByMagnitude ...................... Passed 0.13 sec Start 1325: itkEdgePotentialImageFilterTest 1323/2822 Test #1325: itkEdgePotentialImageFilterTest ............................................... Passed 0.06 sec Start 1326: itkComplexToModulusFilterAndAdaptorTest 1324/2822 Test #1324: itkSymmetricEigenAnalysisImageFilterTestDoNotOrder ............................ Passed 0.18 sec Start 1327: itkAddImageAdaptorTest 1325/2822 Test #1326: itkComplexToModulusFilterAndAdaptorTest ....................................... Passed 0.08 sec Start 1328: itkAndImageFilterTest 1326/2822 Test #1327: itkAddImageAdaptorTest ........................................................ Passed 0.05 sec Start 1329: itkAdaptImageFilterTest2 1327/2822 Test #1328: itkAndImageFilterTest ......................................................... Passed 0.05 sec Start 1330: itkLogImageFilterAndAdaptorTest 1328/2822 Test #1329: itkAdaptImageFilterTest2 ...................................................... Passed 0.13 sec Start 1331: itkNotImageFilterTest 1329/2822 Test #1330: itkLogImageFilterAndAdaptorTest ............................................... Passed 0.16 sec Start 1332: itkImageAdaptorNthElementTest 1330/2822 Test #1331: itkNotImageFilterTest ......................................................... Passed 0.08 sec Start 1333: itkConstrainedValueAdditionImageFilterTest 1331/2822 Test #1333: itkConstrainedValueAdditionImageFilterTest .................................... Passed 0.05 sec Start 1334: itkAtanImageFilterAndAdaptorTest 1332/2822 Test #1332: itkImageAdaptorNthElementTest ................................................. Passed 0.16 sec Start 1335: itkMaskNegatedImageFilterTest 1333/2822 Test #1334: itkAtanImageFilterAndAdaptorTest .............................................. Passed 0.17 sec Start 1336: itkAddImageFilterTest 1334/2822 Test #1335: itkMaskNegatedImageFilterTest ................................................. Passed 0.19 sec Start 1337: itkAddImageFilterTest2 1335/2822 Test #686: itkFFTWF_RealFFTTest .......................................................... Passed 30.56 sec Start 1338: itkAddImageFilterFrameTest 1336/2822 Test #1336: itkAddImageFilterTest ......................................................... Passed 0.14 sec Start 1339: itkPowImageFilterTest 1337/2822 Test #1339: itkPowImageFilterTest ......................................................... Passed 0.04 sec Start 1340: itkMultiplyImageFilterTest 1338/2822 Test #1337: itkAddImageFilterTest2 ........................................................ Passed 0.15 sec Start 1341: itkWeightedAddImageFilterTest 1339/2822 Test #1338: itkAddImageFilterFrameTest .................................................... Passed 0.14 sec Start 1342: itkRescaleIntensityImageFilterTest 1340/2822 Test #1340: itkMultiplyImageFilterTest .................................................... Passed 0.09 sec Start 1343: itkNormalizeImageFilterTest 1341/2822 Test #1341: itkWeightedAddImageFilterTest ................................................. Passed 0.12 sec Start 1344: itkNaryAddImageFilterTest 1342/2822 Test #1342: itkRescaleIntensityImageFilterTest ............................................ Passed 0.16 sec Start 1345: itkShiftScaleImageFilterTest 1343/2822 Test #1310: itkSliceBySliceImageFilterDimension2Test ...................................... Passed 1.86 sec Start 1346: itkComplexToPhaseFilterAndAdaptorTest 1344/2822 Test #1344: itkNaryAddImageFilterTest ..................................................... Passed 0.13 sec Start 1347: itkIntensityWindowingImageFilterTest 1345/2822 Test #1345: itkShiftScaleImageFilterTest .................................................. Passed 0.10 sec Start 1348: itkTernaryMagnitudeImageFilterTest 1346/2822 Test #1346: itkComplexToPhaseFilterAndAdaptorTest ......................................... Passed 0.09 sec Start 1349: itkAbsImageFilterAndAdaptorTest 1347/2822 Test #1348: itkTernaryMagnitudeImageFilterTest ............................................ Passed 0.04 sec Start 1350: itkMaximumImageFilterTest 1348/2822 Test #1347: itkIntensityWindowingImageFilterTest .......................................... Passed 0.09 sec Start 1351: itkBinaryMagnitudeImageFilterTest 1349/2822 Test #1350: itkMaximumImageFilterTest ..................................................... Passed 0.05 sec Start 1352: itkMatrixIndexSelectionImageFilterTest 1350/2822 Test #1343: itkNormalizeImageFilterTest ................................................... Passed 0.34 sec Start 1353: itkSquareImageFilterTest 1351/2822 Test #1349: itkAbsImageFilterAndAdaptorTest ............................................... Passed 0.08 sec Start 1354: itkRGBToVectorAdaptImageFilterTest.cxx 1352/2822 Test #1351: itkBinaryMagnitudeImageFilterTest ............................................. Passed 0.06 sec Start 1355: itkComplexToRealFilterAndAdaptorTest 1353/2822 Test #1352: itkMatrixIndexSelectionImageFilterTest ........................................ Passed 0.07 sec Start 1356: itkNaryMaximumImageFilterTest 1354/2822 Test #1354: itkRGBToVectorAdaptImageFilterTest.cxx ........................................ Passed 0.07 sec Start 1357: itkAtan2ImageFilterTest 1355/2822 Test #1353: itkSquareImageFilterTest ...................................................... Passed 0.11 sec Start 1358: itkSqrtImageFilterAndAdaptorTest 1356/2822 Test #1355: itkComplexToRealFilterAndAdaptorTest .......................................... Passed 0.12 sec Start 1359: itkAsinImageFilterAndAdaptorTest 1357/2822 Test #1356: itkNaryMaximumImageFilterTest ................................................. Passed 0.10 sec Start 1360: itkMaskImageFilterTest 1358/2822 Test #1357: itkAtan2ImageFilterTest ....................................................... Passed 0.10 sec Start 1361: itkHistogramMatchingImageFilterTest 1359/2822 Test #1358: itkSqrtImageFilterAndAdaptorTest .............................................. Passed 0.14 sec Start 1362: itkAcosImageFilterAndAdaptorTest 1360/2822 Test #1359: itkAsinImageFilterAndAdaptorTest .............................................. Passed 0.15 sec Start 1363: itkExpNegativeImageFilterAndAdaptorTest 1361/2822 Test #1360: itkMaskImageFilterTest ........................................................ Passed 0.15 sec Start 1364: itkExpImageFilterAndAdaptorTest 1362/2822 Test #685: itkFFTWF_FFTTest .............................................................. Passed 31.41 sec Start 1365: itkTanImageFilterAndAdaptorTest 1363/2822 Test #1361: itkHistogramMatchingImageFilterTest ........................................... Passed 0.17 sec Start 1366: itkSigmoidImageFilterTest 1364/2822 Test #1308: itkSliceBySliceImageFilterDimension0Test ...................................... Passed 2.39 sec Start 1367: itkDivideImageFilterTest 1365/2822 Test #1362: itkAcosImageFilterAndAdaptorTest .............................................. Passed 0.10 sec Start 1368: itkDivideImageFilterTest2 1366/2822 Test #1365: itkTanImageFilterAndAdaptorTest ............................................... Passed 0.06 sec Start 1369: itkDivideOrZeroOutImageFilterTest 1367/2822 Test #1364: itkExpImageFilterAndAdaptorTest ............................................... Passed 0.08 sec Start 1370: itkVectorExpandImageFilterTest 1368/2822 Test #1363: itkExpNegativeImageFilterAndAdaptorTest ....................................... Passed 0.10 sec Start 1371: itkAdaptImageFilterTest 1369/2822 Test #1366: itkSigmoidImageFilterTest ..................................................... Passed 0.06 sec Start 1372: itkOrImageFilterTest 1370/2822 Test #1367: itkDivideImageFilterTest ...................................................... Passed 0.06 sec Start 1373: itkRGBToLuminanceImageFilterAndAdaptorTest.cxx 1371/2822 Test #1368: itkDivideImageFilterTest2 ..................................................... Passed 0.07 sec Start 1374: itkXorImageFilterTest 1372/2822 Test #1369: itkDivideOrZeroOutImageFilterTest ............................................. Passed 0.06 sec Start 1375: itkSubtractImageFilterTest 1373/2822 Test #1370: itkVectorExpandImageFilterTest ................................................ Passed 0.08 sec Start 1376: itkComplexToImaginaryFilterAndAdaptorTest 1374/2822 Test #1371: itkAdaptImageFilterTest ....................................................... Passed 0.08 sec Start 1377: itkVectorToRGBImageAdaptorTest 1375/2822 Test #1372: itkOrImageFilterTest .......................................................... Passed 0.07 sec Start 1378: itkSinImageFilterAndAdaptorTest 1376/2822 Test #1373: itkRGBToLuminanceImageFilterAndAdaptorTest.cxx ................................ Passed 0.08 sec Start 1379: itkPolylineMask2DImageFilterTest 1377/2822 Test #1374: itkXorImageFilterTest ......................................................... Passed 0.07 sec Start 1380: itkPolylineMaskImageFilterTest 1378/2822 Test #1375: itkSubtractImageFilterTest .................................................... Passed 0.08 sec Start 1381: itkPromoteDimensionImageTest 1379/2822 Test #1377: itkVectorToRGBImageAdaptorTest ................................................ Passed 0.06 sec Start 1382: itkModulusImageFilterTest 1380/2822 Test #1378: itkSinImageFilterAndAdaptorTest ............................................... Passed 0.07 sec Start 1383: itkVectorMagnitudeImageFilterTest 1381/2822 Test #1376: itkComplexToImaginaryFilterAndAdaptorTest ..................................... Passed 0.11 sec Start 1384: itkNormalizeToConstantImageFilterTest 1382/2822 Test #1379: itkPolylineMask2DImageFilterTest .............................................. Passed 0.08 sec Start 1385: itkEqualTest 1383/2822 Test #1380: itkPolylineMaskImageFilterTest ................................................ Passed 0.11 sec Start 1386: itkNotEqualTest 1384/2822 Test #1385: itkEqualTest .................................................................. Passed 0.05 sec Start 1387: itkGreaterEqualTest 1385/2822 Test #1381: itkPromoteDimensionImageTest .................................................. Passed 0.11 sec Start 1388: itkGreaterTest 1386/2822 Test #1384: itkNormalizeToConstantImageFilterTest ......................................... Passed 0.07 sec Start 1389: itkLessEqualTest 1387/2822 Test #1382: itkModulusImageFilterTest ..................................................... Passed 0.12 sec Start 1390: itkLessTest 1388/2822 Test #1383: itkVectorMagnitudeImageFilterTest ............................................. Passed 0.10 sec Start 1391: itkClampImageFilterTest 1389/2822 Test #1386: itkNotEqualTest ............................................................... Passed 0.07 sec Start 1392: itkNthElementPixelAccessorTest2 1390/2822 Test #1388: itkGreaterTest ................................................................ Passed 0.06 sec Start 1393: itkMagnitudeAndPhaseToComplexImageFilterTest 1391/2822 Test #1389: itkLessEqualTest .............................................................. Passed 0.06 sec Start 1394: itkChangeLabelImageFilterTest 1392/2822 Test #1387: itkGreaterEqualTest ........................................................... Passed 0.10 sec Start 1395: itkLabelContourImageFilterTest0 1393/2822 Test #1390: itkLessTest ................................................................... Passed 0.07 sec Start 1396: itkLabelContourImageFilterTest1 1394/2822 Test #1392: itkNthElementPixelAccessorTest2 ............................................... Passed 0.07 sec Start 1397: itkBinaryContourImageFilterTest0 1395/2822 Test #1393: itkMagnitudeAndPhaseToComplexImageFilterTest .................................. Passed 0.08 sec Start 1398: itkBinaryContourImageFilterTest1 1396/2822 Test #1394: itkChangeLabelImageFilterTest ................................................. Passed 0.09 sec Start 1399: ITKImageNoiseInDoxygenGroup 1397/2822 Test #1396: itkLabelContourImageFilterTest1 ............................................... Passed 0.10 sec Start 1401: itkAdditiveGaussianNoiseImageFilterTestPSNR 1398/2822 Test #1395: itkLabelContourImageFilterTest0 ............................................... Passed 0.12 sec Start 1403: itkShotNoiseImageFilterTestPSNR 1399/2822 Test #1397: itkBinaryContourImageFilterTest0 .............................................. Passed 0.10 sec Start 1405: itkSpeckleNoiseImageFilterTestPSNR 1400/2822 Test #1399: ITKImageNoiseInDoxygenGroup ................................................... Passed 0.05 sec Start 1407: itkSaltAndPepperNoiseImageFilterTestPSNR 1401/2822 Test #1398: itkBinaryContourImageFilterTest1 .............................................. Passed 0.10 sec Start 1408: itkGaborKernelFunctionTest 1402/2822 Test #1403: itkShotNoiseImageFilterTestPSNR ............................................... Passed 0.06 sec Start 1409: itkGaborImageSourceTest0 1403/2822 Test #1405: itkSpeckleNoiseImageFilterTestPSNR ............................................ Passed 0.05 sec Start 1410: itkGaborImageSourceTest1 1404/2822 Test #1407: itkSaltAndPepperNoiseImageFilterTestPSNR ...................................... Passed 0.05 sec Start 1411: itkGaussianImageSourceTest1 1405/2822 Test #1401: itkAdditiveGaussianNoiseImageFilterTestPSNR ................................... Passed 0.08 sec Start 1412: itkGaussianImageSourceTest2 1406/2822 Test #1408: itkGaborKernelFunctionTest .................................................... Passed 0.08 sec Start 1413: itkGridImageSourceTest1 1407/2822 Test #1409: itkGaborImageSourceTest0 ...................................................... Passed 0.11 sec Start 1414: itkGridImageSourceTest2 1408/2822 Test #1410: itkGaborImageSourceTest1 ...................................................... Passed 0.16 sec Start 1415: itkGridImageSourceTest3 1409/2822 Test #1413: itkGridImageSourceTest1 ....................................................... Passed 0.13 sec Start 1416: itkGridImageSourceTest4 1410/2822 Test #1414: itkGridImageSourceTest2 ....................................................... Passed 0.12 sec Start 1417: itkPhysicalPointImageSourceTest0 1411/2822 Test #1415: itkGridImageSourceTest3 ....................................................... Passed 0.08 sec Start 1418: itkPhysicalPointImageSourceTest1 1412/2822 Test #1417: itkPhysicalPointImageSourceTest0 .............................................. Passed 0.06 sec Start 1419: itkPhysicalPointImageSourceTest2 1413/2822 Test #1418: itkPhysicalPointImageSourceTest1 .............................................. Passed 0.07 sec Start 1420: itkPhysicalPointImageSourceTest3 1414/2822 Test #1416: itkGridImageSourceTest4 ....................................................... Passed 0.14 sec Start 1421: itkPhysicalPointImageSourceTest4 1415/2822 Test #1419: itkPhysicalPointImageSourceTest2 .............................................. Passed 0.06 sec Start 1422: itkStatisticsImageFilterTest 1416/2822 Test #1420: itkPhysicalPointImageSourceTest3 .............................................. Passed 0.10 sec Start 1423: itkLabelStatisticsImageFilterTest 1417/2822 Test #1411: itkGaussianImageSourceTest1 ................................................... Passed 0.43 sec Start 1424: itkSumProjectionImageFilterTest 1418/2822 Test #1412: itkGaussianImageSourceTest2 ................................................... Passed 0.42 sec Start 1425: itkStandardDeviationProjectionImageFilterTest 1419/2822 Test #1421: itkPhysicalPointImageSourceTest4 .............................................. Passed 0.10 sec Start 1426: itkImageMomentsTest 1420/2822 Test #1422: itkStatisticsImageFilterTest .................................................. Passed 0.12 sec Start 1427: itkImageToHistogramFilterTest 1421/2822 Test #1426: itkImageMomentsTest ........................................................... Passed 0.05 sec Start 1428: itkImageToHistogramFilterTest2 1422/2822 Test #1424: itkSumProjectionImageFilterTest ............................................... Passed 0.07 sec Start 1429: itkImageToHistogramFilterTest3 1423/2822 Test #1425: itkStandardDeviationProjectionImageFilterTest ................................. Passed 0.09 sec Start 1430: itkMinimumMaximumImageFilterTest 1424/2822 Test #1423: itkLabelStatisticsImageFilterTest ............................................. Passed 0.11 sec Start 1431: itkImagePCAShapeModelEstimatorTest 1425/2822 Test #1309: itkSliceBySliceImageFilterDimension1Test ...................................... Passed 3.49 sec Start 1432: itkMaximumProjectionImageFilterTest2_1 1426/2822 Test #1428: itkImageToHistogramFilterTest2 ................................................ Passed 0.08 sec Start 1433: itkMaximumProjectionImageFilterTest2_2 1427/2822 Test #1430: itkMinimumMaximumImageFilterTest .............................................. Passed 0.06 sec Start 1434: itkMaximumProjectionImageFilterTest3_1 1428/2822 Test #1431: itkImagePCAShapeModelEstimatorTest ............................................ Passed 0.06 sec Start 1435: itkMaximumProjectionImageFilterTest3_2 1429/2822 Test #1429: itkImageToHistogramFilterTest3 ................................................ Passed 0.08 sec Start 1436: itkMinimumProjectionImageFilterTest 1430/2822 Test #1432: itkMaximumProjectionImageFilterTest2_1 ........................................ Passed 0.06 sec Start 1437: itkMeanProjectionImageFilterTest 1431/2822 Test #1434: itkMaximumProjectionImageFilterTest3_1 ........................................ Passed 0.06 sec Start 1438: itkImagePCADecompositionCalculatorTest 1432/2822 Test #1433: itkMaximumProjectionImageFilterTest2_2 ........................................ Passed 0.06 sec Start 1439: itkMaximumProjectionImageFilterTest 1433/2822 Test #1435: itkMaximumProjectionImageFilterTest3_2 ........................................ Passed 0.07 sec Start 1440: itkMedianProjectionImageFilterTest 1434/2822 Test #1436: itkMinimumProjectionImageFilterTest ........................................... Passed 0.09 sec Start 1441: itkHistogramToEntropyImageFilterTest1 1435/2822 Test #1438: itkImagePCADecompositionCalculatorTest ........................................ Passed 0.05 sec Start 1442: itkHistogramToEntropyImageFilterTest2 1436/2822 Test #1437: itkMeanProjectionImageFilterTest .............................................. Passed 0.08 sec Start 1443: itkHistogramToIntensityImageFilterTest1 1437/2822 Test #1441: itkHistogramToEntropyImageFilterTest1 ......................................... Passed 0.05 sec Start 1444: itkHistogramToIntensityImageFilterTest2 1438/2822 Test #1439: itkMaximumProjectionImageFilterTest ........................................... Passed 0.08 sec Start 1445: itkHistogramToLogProbabilityImageFilterTest1 1439/2822 Test #1440: itkMedianProjectionImageFilterTest ............................................ Passed 0.07 sec Start 1446: itkHistogramToLogProbabilityImageFilterTest2 1440/2822 Test #1443: itkHistogramToIntensityImageFilterTest1 ....................................... Passed 0.06 sec Start 1447: itkHistogramToProbabilityImageFilterTest1 1441/2822 Test #1445: itkHistogramToLogProbabilityImageFilterTest1 .................................. Passed 0.05 sec Start 1448: itkHistogramToProbabilityImageFilterTest2 1442/2822 Test #1442: itkHistogramToEntropyImageFilterTest2 ......................................... Passed 0.15 sec Start 1449: itkAccumulateImageFilterTest 1443/2822 Test #1444: itkHistogramToIntensityImageFilterTest2 ....................................... Passed 0.14 sec Start 1450: itkAdaptiveHistogramEqualizationImageFilterTest 1444/2822 Test #1447: itkHistogramToProbabilityImageFilterTest1 ..................................... Passed 0.11 sec Start 1451: itkAdaptiveHistogramEqualizationImageFilterTest2 1445/2822 Test #1448: itkHistogramToProbabilityImageFilterTest2 ..................................... Passed 0.13 sec Start 1452: itkGetAverageSliceImageFilterTest 1446/2822 Test #1446: itkHistogramToLogProbabilityImageFilterTest2 .................................. Passed 0.18 sec Start 1453: itkBinaryProjectionImageFilterTest1 1447/2822 Test #1453: itkBinaryProjectionImageFilterTest1 ........................................... Passed 0.07 sec Start 1454: itkBinaryProjectionImageFilterTest2 1448/2822 Test #1449: itkAccumulateImageFilterTest .................................................. Passed 0.19 sec Start 1455: itkProjectionImageFilterTest1 1449/2822 Test #1452: itkGetAverageSliceImageFilterTest ............................................. Passed 0.13 sec Start 1456: itkLabelOverlapMeasuresImageFilterTest 1450/2822 Test #1454: itkBinaryProjectionImageFilterTest2 ........................................... Passed 0.10 sec Start 1457: ITKKLMRegionGrowingInDoxygenGroup 1451/2822 Test #1455: itkProjectionImageFilterTest1 ................................................. Passed 0.07 sec Start 1458: ITKLabelVotingInDoxygenGroup 1452/2822 Test #1456: itkLabelOverlapMeasuresImageFilterTest ........................................ Passed 0.09 sec Start 1459: ITKMarkovRandomFieldsClassifiersInDoxygenGroup 1453/2822 Test #1457: ITKKLMRegionGrowingInDoxygenGroup ............................................. Passed 0.05 sec Start 1460: ITKNeuralNetworksInDoxygenGroup 1454/2822 Test #1450: itkAdaptiveHistogramEqualizationImageFilterTest ............................... Passed 0.27 sec Start 1461: ITKQuadEdgeMeshFilteringInDoxygenGroup 1455/2822 Test #1458: ITKLabelVotingInDoxygenGroup .................................................. Passed 0.03 sec Start 1462: ITKRegionGrowingInDoxygenGroup 1456/2822 Test #1451: itkAdaptiveHistogramEqualizationImageFilterTest2 .............................. Passed 0.26 sec Start 1463: ITKSpatialFunctionInDoxygenGroup 1457/2822 Test #1459: ITKMarkovRandomFieldsClassifiersInDoxygenGroup ................................ Passed 0.02 sec Start 1464: ITKVTKInDoxygenGroup 1458/2822 Test #1462: ITKRegionGrowingInDoxygenGroup ................................................ Passed 0.02 sec Start 1465: ITKVoronoiInDoxygenGroup 1459/2822 Test #1463: ITKSpatialFunctionInDoxygenGroup .............................................. Passed 0.02 sec Start 1466: ITKWatershedsInDoxygenGroup 1460/2822 Test #1464: ITKVTKInDoxygenGroup .......................................................... Passed 0.02 sec Start 1467: itkAlgorithmsPrintTest 1461/2822 Test #1461: ITKQuadEdgeMeshFilteringInDoxygenGroup ........................................ Passed 0.04 sec Start 1468: itkAlgorithmsPrintTest2 1462/2822 Test #1460: ITKNeuralNetworksInDoxygenGroup ............................................... Passed 0.04 sec Start 1469: itkAlgorithmsPrintTest3 1463/2822 Test #1465: ITKVoronoiInDoxygenGroup ...................................................... Passed 0.02 sec Start 1470: itkAlgorithmsPrintTest4 1464/2822 Test #1466: ITKWatershedsInDoxygenGroup ................................................... Passed 0.02 sec Start 1471: itkStatisticsPrintTest 1465/2822 Test #1391: itkClampImageFilterTest ....................................................... Passed 1.43 sec Start 1472: itkSpatialObjectPrintTest 1466/2822 Test #1468: itkAlgorithmsPrintTest2 ....................................................... Passed 0.01 sec Start 1473: itkIOPrintTest 1467/2822 Test #1467: itkAlgorithmsPrintTest ........................................................ Passed 0.02 sec Start 1474: itkCommonPrintTest 1468/2822 Test #1469: itkAlgorithmsPrintTest3 ....................................................... Passed 0.02 sec Start 1475: itkBasicFiltersPrintTest 1469/2822 Test #1470: itkAlgorithmsPrintTest4 ....................................................... Passed 0.02 sec Start 1476: itkNeuralNetworksPrintTest 1470/2822 Test #1476: itkNeuralNetworksPrintTest .................................................... Passed 0.05 sec Start 1477: itkNumericsPrintTest 1471/2822 Test #1473: itkIOPrintTest ................................................................ Passed 0.06 sec Start 1478: itkShrinkImagePreserveObjectPhysicalLocations 1472/2822 Test #1471: itkStatisticsPrintTest ........................................................ Passed 0.07 sec Start 1479: itkRegionGrow2DTest 1473/2822 Test #1472: itkSpatialObjectPrintTest ..................................................... Passed 0.08 sec Start 1480: itkShiftLabelObjectTest 1474/2822 Test #1474: itkCommonPrintTest ............................................................ Passed 0.08 sec Start 1481: itkAggregateLabelMapFilterTest1 1475/2822 Test #1475: itkBasicFiltersPrintTest ...................................................... Passed 0.07 sec Start 1482: itkAttributeKeepNObjectsLabelMapFilterTest0 1476/2822 Test #1477: itkNumericsPrintTest .......................................................... Passed 0.04 sec Start 1483: itkAttributeKeepNObjectsLabelMapFilterTest1 1477/2822 Test #1478: itkShrinkImagePreserveObjectPhysicalLocations ................................. Passed 0.08 sec Start 1484: itkAttributeLabelObjectAccessorsTest1 1478/2822 Test #1480: itkShiftLabelObjectTest ....................................................... Passed 0.07 sec Start 1485: itkAttributeOpeningLabelMapFilterTest0 1479/2822 Test #1481: itkAggregateLabelMapFilterTest1 ............................................... Passed 0.07 sec Start 1486: itkAttributeOpeningLabelMapFilterTest1 1480/2822 Test #1482: itkAttributeKeepNObjectsLabelMapFilterTest0 ................................... Passed 0.07 sec Start 1487: itkAttributePositionLabelMapFilterTest1 1481/2822 Test #1483: itkAttributeKeepNObjectsLabelMapFilterTest1 ................................... Passed 0.07 sec Start 1488: itkAttributeRelabelLabelMapFilterTest0 1482/2822 Test #1484: itkAttributeLabelObjectAccessorsTest1 ......................................... Passed 0.05 sec Start 1489: itkAttributeRelabelLabelMapFilterTest1 1483/2822 Test #1487: itkAttributePositionLabelMapFilterTest1 ....................................... Passed 0.06 sec Start 1490: itkAttributeUniqueLabelMapFilterTest0 1484/2822 Test #1485: itkAttributeOpeningLabelMapFilterTest0 ........................................ Passed 0.08 sec Start 1491: itkAttributeUniqueLabelMapFilterTest1 1485/2822 Test #1486: itkAttributeOpeningLabelMapFilterTest1 ........................................ Passed 0.07 sec Start 1492: itkAutoCropLabelMapFilterTest1 1486/2822 Test #1488: itkAttributeRelabelLabelMapFilterTest0 ........................................ Passed 0.07 sec Start 1493: itkBinaryFillholeImageFilterTest1 1487/2822 Test #1489: itkAttributeRelabelLabelMapFilterTest1 ........................................ Passed 0.07 sec Start 1494: itkBinaryGrindPeakImageFilterTest1 1488/2822 Test #1492: itkAutoCropLabelMapFilterTest1 ................................................ Passed 0.05 sec Start 1495: itkBinaryGrindPeakImageFilterTest2 1489/2822 Test #1491: itkAttributeUniqueLabelMapFilterTest1 ......................................... Passed 0.08 sec Start 1496: itkBinaryImageToLabelMapFilterTest1 1490/2822 Test #1490: itkAttributeUniqueLabelMapFilterTest0 ......................................... Passed 0.10 sec Start 1497: itkBinaryImageToLabelMapFilterTest2 1491/2822 Test #1494: itkBinaryGrindPeakImageFilterTest1 ............................................ Passed 0.07 sec Start 1498: itkBinaryImageToLabelMapFilterTest3 1492/2822 Test #1493: itkBinaryFillholeImageFilterTest1 ............................................. Passed 0.09 sec Start 1499: itkBinaryImageToLabelMapFilterTest4 1493/2822 Test #1495: itkBinaryGrindPeakImageFilterTest2 ............................................ Passed 0.06 sec Start 1500: itkBinaryImageToLabelMapFilterTest5 1494/2822 Test #1498: itkBinaryImageToLabelMapFilterTest3 ........................................... Passed 0.05 sec Start 1501: itkBinaryImageToLabelMapFilterTest6 1495/2822 Test #1497: itkBinaryImageToLabelMapFilterTest2 ........................................... Passed 0.07 sec Start 1502: itkBinaryImageToLabelMapFilterTest7 1496/2822 Test #1496: itkBinaryImageToLabelMapFilterTest1 ........................................... Passed 0.09 sec Start 1503: itkBinaryImageToShapeLabelMapFilterTest1 1497/2822 Test #1499: itkBinaryImageToLabelMapFilterTest4 ........................................... Passed 0.06 sec Start 1504: itkBinaryImageToStatisticsLabelMapFilterTest1 1498/2822 Test #1500: itkBinaryImageToLabelMapFilterTest5 ........................................... Passed 0.06 sec Start 1505: itkBinaryReconstructionByDilationImageFilterTest 1499/2822 Test #1501: itkBinaryImageToLabelMapFilterTest6 ........................................... Passed 0.05 sec Start 1506: itkBinaryReconstructionByErosionImageFilterTest 1500/2822 Test #1502: itkBinaryImageToLabelMapFilterTest7 ........................................... Passed 0.04 sec Start 1507: itkBinaryReconstructionLabelMapFilterTest 1501/2822 Test #1505: itkBinaryReconstructionByDilationImageFilterTest .............................. Passed 0.05 sec Start 1508: itkBinaryShapeKeepNObjectsImageFilterTest1 1502/2822 Test #1504: itkBinaryImageToStatisticsLabelMapFilterTest1 ................................. Passed 0.09 sec Start 1509: itkBinaryShapeOpeningImageFilterTest1 1503/2822 Test #1507: itkBinaryReconstructionLabelMapFilterTest ..................................... Passed 0.06 sec Start 1510: itkBinaryStatisticsKeepNObjectsImageFilterTest1 1504/2822 Test #1503: itkBinaryImageToShapeLabelMapFilterTest1 ...................................... Passed 0.11 sec Start 1511: itkBinaryStatisticsOpeningImageFilterTest1 1505/2822 Test #1506: itkBinaryReconstructionByErosionImageFilterTest ............................... Passed 0.08 sec Start 1512: itkChangeLabelLabelMapFilterTest1 1506/2822 Test #1508: itkBinaryShapeKeepNObjectsImageFilterTest1 .................................... Passed 0.05 sec Start 1513: itkChangeLabelLabelMapFilterTest2 1507/2822 Test #1509: itkBinaryShapeOpeningImageFilterTest1 ......................................... Passed 0.07 sec Start 1514: itkChangeLabelLabelMapFilterTest3 1508/2822 Test #1511: itkBinaryStatisticsOpeningImageFilterTest1 .................................... Passed 0.06 sec Start 1515: itkChangeRegionLabelMapFilterTest1 1509/2822 Test #1512: itkChangeLabelLabelMapFilterTest1 ............................................. Passed 0.06 sec Start 1516: itkConvertLabelMapFilterTest1 1510/2822 Test #1510: itkBinaryStatisticsKeepNObjectsImageFilterTest1 ............................... Passed 0.08 sec Start 1517: itkConvertLabelMapFilterTest2 1511/2822 Test #1513: itkChangeLabelLabelMapFilterTest2 ............................................. Passed 0.06 sec Start 1518: itkCropLabelMapFilterTest1 1512/2822 Test #1514: itkChangeLabelLabelMapFilterTest3 ............................................. Passed 0.06 sec Start 1519: itkLabelImageToLabelMapFilterTest 1513/2822 Test #1516: itkConvertLabelMapFilterTest1 ................................................. Passed 0.06 sec Start 1520: itkLabelImageToShapeLabelMapFilterTest1 1514/2822 Test #1518: itkCropLabelMapFilterTest1 .................................................... Passed 0.05 sec Start 1521: itkLabelImageToShapeLabelMapFilterTest2 1515/2822 Test #1515: itkChangeRegionLabelMapFilterTest1 ............................................ Passed 0.08 sec Start 1522: itkLabelImageToStatisticsLabelMapFilterTest1 1516/2822 Test #1519: itkLabelImageToLabelMapFilterTest ............................................. Passed 0.05 sec Start 1523: itkLabelMapFilterTest 1517/2822 Test #1521: itkLabelImageToShapeLabelMapFilterTest2 ....................................... Passed 0.05 sec Start 1524: itkLabelMapMaskImageFilterTest-0-0-0 1518/2822 Test #1520: itkLabelImageToShapeLabelMapFilterTest1 ....................................... Passed 0.06 sec Start 1525: itkLabelMapMaskImageFilterTestCrop-0-0-0-0 1519/2822 Test #1523: itkLabelMapFilterTest ......................................................... Passed 0.04 sec Start 1526: itkLabelMapMaskImageFilterTestCrop-0-0-0-10 1520/2822 Test #1522: itkLabelImageToStatisticsLabelMapFilterTest1 .................................. Passed 0.10 sec Start 1527: itkLabelMapMaskImageFilterTest-0-0-1 1521/2822 Test #1524: itkLabelMapMaskImageFilterTest-0-0-0 .......................................... Passed 0.08 sec Start 1528: itkLabelMapMaskImageFilterTestCrop-0-0-1-0 1522/2822 Test #1525: itkLabelMapMaskImageFilterTestCrop-0-0-0-0 .................................... Passed 0.07 sec Start 1529: itkLabelMapMaskImageFilterTestCrop-0-0-1-10 1523/2822 Test #1526: itkLabelMapMaskImageFilterTestCrop-0-0-0-10 ................................... Passed 0.08 sec Start 1530: itkLabelMapMaskImageFilterTest-0-1-0 1524/2822 Test #1517: itkConvertLabelMapFilterTest2 ................................................. Passed 0.23 sec Start 1531: itkLabelMapMaskImageFilterTestCrop-0-1-0-0 1525/2822 Test #1529: itkLabelMapMaskImageFilterTestCrop-0-0-1-10 ................................... Passed 0.07 sec Start 1532: itkLabelMapMaskImageFilterTestCrop-0-1-0-10 1526/2822 Test #1527: itkLabelMapMaskImageFilterTest-0-0-1 .......................................... Passed 0.08 sec Start 1533: itkLabelMapMaskImageFilterTest-0-1-1 1527/2822 Test #1528: itkLabelMapMaskImageFilterTestCrop-0-0-1-0 .................................... Passed 0.08 sec Start 1534: itkLabelMapMaskImageFilterTestCrop-0-1-1-0 1528/2822 Test #1530: itkLabelMapMaskImageFilterTest-0-1-0 .......................................... Passed 0.06 sec Start 1535: itkLabelMapMaskImageFilterTestCrop-0-1-1-10 1529/2822 Test #1531: itkLabelMapMaskImageFilterTestCrop-0-1-0-0 .................................... Passed 0.06 sec Start 1536: itkLabelMapMaskImageFilterTest-100-0-0 1530/2822 Test #1532: itkLabelMapMaskImageFilterTestCrop-0-1-0-10 ................................... Passed 0.07 sec Start 1537: itkLabelMapMaskImageFilterTestCrop-100-0-0-0 1531/2822 Test #1534: itkLabelMapMaskImageFilterTestCrop-0-1-1-0 .................................... Passed 0.07 sec Start 1538: itkLabelMapMaskImageFilterTestCrop-100-0-0-10 1532/2822 Test #1533: itkLabelMapMaskImageFilterTest-0-1-1 .......................................... Passed 0.08 sec Start 1539: itkLabelMapMaskImageFilterTest-100-0-1 1533/2822 Test #1535: itkLabelMapMaskImageFilterTestCrop-0-1-1-10 ................................... Passed 0.07 sec Start 1540: itkLabelMapMaskImageFilterTestCrop-100-0-1-0 1534/2822 Test #1536: itkLabelMapMaskImageFilterTest-100-0-0 ........................................ Passed 0.06 sec Start 1541: itkLabelMapMaskImageFilterTestCrop-100-0-1-10 1535/2822 Test #1537: itkLabelMapMaskImageFilterTestCrop-100-0-0-0 .................................. Passed 0.07 sec Start 1542: itkLabelMapMaskImageFilterTest-100-1-0 1536/2822 Test #1539: itkLabelMapMaskImageFilterTest-100-0-1 ........................................ Passed 0.07 sec Start 1543: itkLabelMapMaskImageFilterTestCrop-100-1-0-0 1537/2822 Test #1538: itkLabelMapMaskImageFilterTestCrop-100-0-0-10 ................................. Passed 0.08 sec Start 1544: itkLabelMapMaskImageFilterTestCrop-100-1-0-10 1538/2822 Test #1541: itkLabelMapMaskImageFilterTestCrop-100-0-1-10 ................................. Passed 0.06 sec Start 1545: itkLabelMapMaskImageFilterTest-100-1-1 1539/2822 Test #1540: itkLabelMapMaskImageFilterTestCrop-100-0-1-0 .................................. Passed 0.07 sec Start 1546: itkLabelMapMaskImageFilterTestCrop-100-1-1-0 1540/2822 Test #1542: itkLabelMapMaskImageFilterTest-100-1-0 ........................................ Passed 0.07 sec Start 1547: itkLabelMapMaskImageFilterTestCrop-100-1-1-10 1541/2822 Test #1544: itkLabelMapMaskImageFilterTestCrop-100-1-0-10 ................................. Passed 0.07 sec Start 1548: itkLabelMapTest 1542/2822 Test #1543: itkLabelMapMaskImageFilterTestCrop-100-1-0-0 .................................. Passed 0.08 sec Start 1549: itkLabelMapTest2 1543/2822 Test #1546: itkLabelMapMaskImageFilterTestCrop-100-1-1-0 .................................. Passed 0.06 sec Start 1550: itkLabelMapToAttributeImageFilterTest1 1544/2822 Test #1545: itkLabelMapMaskImageFilterTest-100-1-1 ........................................ Passed 0.07 sec Start 1551: itkLabelMapToBinaryImageFilterTest1 1545/2822 Test #1548: itkLabelMapTest ............................................................... Passed 0.04 sec Start 1552: itkLabelMapToLabelImageFilterTest 1546/2822 Test #1549: itkLabelMapTest2 .............................................................. Passed 0.04 sec Start 1553: itkLabelObjectLineComparatorTest 1547/2822 Test #1547: itkLabelMapMaskImageFilterTestCrop-100-1-1-10 ................................. Passed 0.08 sec Start 1554: itkLabelObjectLineTest 1548/2822 Test #1550: itkLabelMapToAttributeImageFilterTest1 ........................................ Passed 0.06 sec Start 1555: itkLabelObjectTest 1549/2822 Test #1551: itkLabelMapToBinaryImageFilterTest1 ........................................... Passed 0.06 sec Start 1556: itkLabelSelectionLabelMapFilterTest0 1550/2822 Test #1554: itkLabelObjectLineTest ........................................................ Passed 0.04 sec Start 1557: itkLabelSelectionLabelMapFilterTest1 1551/2822 Test #1552: itkLabelMapToLabelImageFilterTest ............................................. Passed 0.06 sec Start 1558: itkLabelShapeKeepNObjectsImageFilterTest1 1552/2822 Test #1553: itkLabelObjectLineComparatorTest .............................................. Passed 0.06 sec Start 1559: itkLabelShapeOpeningImageFilterTest1 1553/2822 Test #1555: itkLabelObjectTest ............................................................ Passed 0.04 sec Start 1560: itkLabelStatisticsKeepNObjectsImageFilterTest1 1554/2822 Test #1556: itkLabelSelectionLabelMapFilterTest0 .......................................... Passed 0.06 sec Start 1561: itkLabelStatisticsOpeningImageFilterTest1 1555/2822 Test #1557: itkLabelSelectionLabelMapFilterTest1 .......................................... Passed 0.06 sec Start 1562: itkLabelUniqueLabelMapFilterTest0 1556/2822 Test #1558: itkLabelShapeKeepNObjectsImageFilterTest1 ..................................... Passed 0.06 sec Start 1563: itkLabelUniqueLabelMapFilterTest1 1557/2822 Test #1559: itkLabelShapeOpeningImageFilterTest1 .......................................... Passed 0.07 sec Start 1564: itkMergeLabelMapFilterTest1a 1558/2822 Test #1560: itkLabelStatisticsKeepNObjectsImageFilterTest1 ................................ Passed 0.08 sec Start 1565: itkMergeLabelMapFilterTest1b 1559/2822 Test #1563: itkLabelUniqueLabelMapFilterTest1 ............................................. Passed 0.06 sec Start 1566: itkMergeLabelMapFilterTest1c 1560/2822 Test #1562: itkLabelUniqueLabelMapFilterTest0 ............................................. Passed 0.07 sec Start 1567: itkMergeLabelMapFilterTest1d 1561/2822 Test #1561: itkLabelStatisticsOpeningImageFilterTest1 ..................................... Passed 0.09 sec Start 1568: itkMergeLabelMapFilterTest1e 1562/2822 Test #1564: itkMergeLabelMapFilterTest1a .................................................. Passed 0.06 sec Start 1569: itkMergeLabelMapFilterTest1f 1563/2822 Test #1565: itkMergeLabelMapFilterTest1b .................................................. Passed 0.06 sec Start 1570: itkObjectByObjectLabelMapFilterTest0 1564/2822 Test #1566: itkMergeLabelMapFilterTest1c .................................................. Passed 0.05 sec Start 1571: itkObjectByObjectLabelMapFilterTest1 1565/2822 Test #1567: itkMergeLabelMapFilterTest1d .................................................. Passed 0.05 sec Start 1572: itkPadLabelMapFilterTest1 1566/2822 Test #1568: itkMergeLabelMapFilterTest1e .................................................. Passed 0.05 sec Start 1573: itkRegionFromReferenceLabelMapFilterTest1 1567/2822 Test #1569: itkMergeLabelMapFilterTest1f .................................................. Passed 0.05 sec Start 1574: itkRelabelLabelMapFilterTest1 1568/2822 Test #1573: itkRegionFromReferenceLabelMapFilterTest1 ..................................... Passed 0.05 sec Start 1575: itkShapeKeepNObjectsLabelMapFilterTest1 1569/2822 Test #1570: itkObjectByObjectLabelMapFilterTest0 .......................................... Passed 0.08 sec Start 1576: itkShapeLabelObjectAccessorsTest1 1570/2822 Test #1572: itkPadLabelMapFilterTest1 ..................................................... Passed 0.06 sec Start 1577: itkShapeOpeningLabelMapFilterTest1 1571/2822 Test #1571: itkObjectByObjectLabelMapFilterTest1 .......................................... Passed 0.08 sec Start 1578: itkShapePositionLabelMapFilterTest1 1572/2822 Test #1574: itkRelabelLabelMapFilterTest1 ................................................. Passed 0.07 sec Start 1579: itkShapeRelabelLabelMapFilterTest1 1573/2822 Test #1575: itkShapeKeepNObjectsLabelMapFilterTest1 ....................................... Passed 0.07 sec Start 1580: itkShapeUniqueLabelMapFilterTest1 1574/2822 Test #1576: itkShapeLabelObjectAccessorsTest1 ............................................. Passed 0.06 sec Start 1581: itkShiftScaleLabelMapFilterTest1 1575/2822 Test #1577: itkShapeOpeningLabelMapFilterTest1 ............................................ Passed 0.07 sec Start 1582: itkStatisticsPositionLabelMapFilterTest1 1576/2822 Test #1578: itkShapePositionLabelMapFilterTest1 ........................................... Passed 0.06 sec Start 1583: itkShapeRelabelImageFilterTest1 1577/2822 Test #1579: itkShapeRelabelLabelMapFilterTest1 ............................................ Passed 0.06 sec Start 1584: itkStatisticsRelabelImageFilterTest1 1578/2822 Test #1580: itkShapeUniqueLabelMapFilterTest1 ............................................. Passed 0.05 sec Start 1585: itkAutoCropLabelMapFilterTest2 1579/2822 Test #1581: itkShiftScaleLabelMapFilterTest1 .............................................. Passed 0.05 sec Start 1586: itkStatisticsUniqueLabelMapFilterTest1 1580/2822 Test #1582: itkStatisticsPositionLabelMapFilterTest1 ...................................... Passed 0.07 sec Start 1587: itkStatisticsUniqueLabelMapFilterTest2 1581/2822 Test #1583: itkShapeRelabelImageFilterTest1 ............................................... Passed 0.07 sec Start 1588: itkVotingBinaryImageFilterTest0 1582/2822 Test #1584: itkStatisticsRelabelImageFilterTest1 .......................................... Passed 0.09 sec Start 1589: itkVotingBinaryImageFilterTest1 1583/2822 Test #1585: itkAutoCropLabelMapFilterTest2 ................................................ Passed 0.09 sec Start 1590: itkLabelVotingImageFilterTest 1584/2822 Test #1586: itkStatisticsUniqueLabelMapFilterTest1 ........................................ Passed 0.10 sec Start 1591: itkVotingBinaryIterativeHoleFillingImageFilterTest 1585/2822 Test #1587: itkStatisticsUniqueLabelMapFilterTest2 ........................................ Passed 0.08 sec Start 1592: itkBinaryMedianImageFilterTest 1586/2822 Test #1590: itkLabelVotingImageFilterTest ................................................. Passed 0.05 sec Start 1593: itkVotingBinaryHoleFillingImageFilterTest 1587/2822 Test #1592: itkBinaryMedianImageFilterTest ................................................ Passed 0.04 sec Start 1594: itkMultiLabelSTAPLEImageFilterTest 1588/2822 Test #1588: itkVotingBinaryImageFilterTest0 ............................................... Passed 0.13 sec Start 1595: itkThresholdSegmentationLevelSetImageFilterTest 1589/2822 Test #1589: itkVotingBinaryImageFilterTest1 ............................................... Passed 0.10 sec Start 1596: itkVectorThresholdSegmentationLevelSetImageFilterTest 1590/2822 Test #1591: itkVotingBinaryIterativeHoleFillingImageFilterTest ............................ Passed 0.06 sec Start 1597: itkAnisotropicFourthOrderLevelSetImageFilterTest 1591/2822 Test #1593: itkVotingBinaryHoleFillingImageFilterTest ..................................... Passed 0.05 sec Start 1598: itkReinitializeLevelSetImageFilterTest 1592/2822 Test #1594: itkMultiLabelSTAPLEImageFilterTest ............................................ Passed 0.05 sec Start 1599: itkLevelSetVelocityNeighborhoodExtractorTest 1593/2822 Test #1596: itkVectorThresholdSegmentationLevelSetImageFilterTest ......................... Passed 0.08 sec Start 1600: itkIsotropicFourthOrderLevelSetImageFilterTest 1594/2822 Test #1599: itkLevelSetVelocityNeighborhoodExtractorTest .................................. Passed 0.05 sec Start 1601: itkGeodesicActiveContourLevelSetImageFilterTest 1595/2822 Test #1598: itkReinitializeLevelSetImageFilterTest ........................................ Passed 0.09 sec Start 1602: itkGeodesicActiveContourShapePriorLevelSetImageFilterTest_2 1596/2822 Test #1597: itkAnisotropicFourthOrderLevelSetImageFilterTest .............................. Passed 0.13 sec Start 1603: itkParallelSparseFieldLevelSetImageFilterTest 1597/2822 Test #1601: itkGeodesicActiveContourLevelSetImageFilterTest ............................... Passed 0.11 sec Start 1604: itkShapeDetectionLevelSetImageFilterTest 1598/2822 Test #1595: itkThresholdSegmentationLevelSetImageFilterTest ............................... Passed 0.22 sec Start 1605: itkNarrowBandThresholdSegmentationLevelSetImageFilterTest 1599/2822 Test #1604: itkShapeDetectionLevelSetImageFilterTest ...................................... Passed 0.11 sec Start 1606: itkNarrowBandCurvesLevelSetImageFilterTest1 1600/2822 Test #1606: itkNarrowBandCurvesLevelSetImageFilterTest1 ................................... Passed 0.11 sec Start 1607: itkCollidingFrontsImageFilterTest 1601/2822 Test #1607: itkCollidingFrontsImageFilterTest ............................................. Passed 0.10 sec Start 1608: itkGeodesicActiveContourShapePriorLevelSetImageFilterTest 1602/2822 Test #1605: itkNarrowBandThresholdSegmentationLevelSetImageFilterTest ..................... Passed 0.41 sec Start 1609: itkLevelSetFunctionTest 1603/2822 Test #1427: itkImageToHistogramFilterTest ................................................. Passed 3.05 sec Start 1610: itkExtensionVelocitiesImageFilterTest 1604/2822 Test #1600: itkIsotropicFourthOrderLevelSetImageFilterTest ................................ Passed 0.61 sec Start 1611: itkCannySegmentationLevelSetImageFilterTest 1605/2822 Test #1603: itkParallelSparseFieldLevelSetImageFilterTest ................................. Passed 0.61 sec Start 1612: itkLevelSetNeighborhoodExtractorTest 1606/2822 Test #1610: itkExtensionVelocitiesImageFilterTest ......................................... Passed 0.10 sec Start 1613: itkShapePriorMAPCostFunctionTest 1607/2822 Test #1612: itkLevelSetNeighborhoodExtractorTest .......................................... Passed 0.05 sec Start 1614: itkImplicitManifoldNormalVectorFilterTest 1608/2822 Test #1613: itkShapePriorMAPCostFunctionTest .............................................. Passed 0.05 sec Start 1615: itkSparseFieldFourthOrderLevelSetImageFilterTest 1609/2822 Test #1608: itkGeodesicActiveContourShapePriorLevelSetImageFilterTest ..................... Passed 0.51 sec Start 1616: itkLaplacianSegmentationLevelSetImageFilterTest 1610/2822 Test #1615: itkSparseFieldFourthOrderLevelSetImageFilterTest .............................. Passed 0.27 sec Start 1617: itkShapePriorSegmentationLevelSetFunctionTest 1611/2822 Test #1614: itkImplicitManifoldNormalVectorFilterTest ..................................... Passed 0.46 sec Start 1618: itkGeodesicActiveContourLevelSetImageFilterZeroSigmaTest 1612/2822 Test #1616: itkLaplacianSegmentationLevelSetImageFilterTest ............................... Passed 0.30 sec Start 1619: itkUnsharpMaskLevelSetImageFilterTest 1613/2822 Test #1618: itkGeodesicActiveContourLevelSetImageFilterZeroSigmaTest ...................... Passed 0.16 sec Start 1620: itkCurvesLevelSetImageFilterTest 1614/2822 Test #1602: itkGeodesicActiveContourShapePriorLevelSetImageFilterTest_2 ................... Passed 1.30 sec Start 1621: itkCurvesLevelSetImageFilterZeroSigmaTest 1615/2822 Test #1619: itkUnsharpMaskLevelSetImageFilterTest ......................................... Passed 0.17 sec Start 1622: ITKLevelSetsv4InDoxygenGroup 1616/2822 Test #1620: itkCurvesLevelSetImageFilterTest .............................................. Passed 0.13 sec Start 1623: itkLevelSetsv4EquationBinaryMaskTermTest 1617/2822 Test #1621: itkCurvesLevelSetImageFilterZeroSigmaTest ..................................... Passed 0.15 sec Start 1624: itkLevelSetsv4EquationOverlapPenaltyTermTest 1618/2822 Test #1622: ITKLevelSetsv4InDoxygenGroup .................................................. Passed 0.06 sec Start 1625: itkLevelSetsv4DenseImageBaseTest 1619/2822 Test #1617: itkShapePriorSegmentationLevelSetFunctionTest ................................. Passed 0.50 sec Start 1626: itkWhitakerSparseLevelSetsv4BaseTest 1620/2822 Test #1623: itkLevelSetsv4EquationBinaryMaskTermTest ...................................... Passed 0.07 sec Start 1627: itkShiSparseLevelSetsv4BaseTest 1621/2822 Test #1624: itkLevelSetsv4EquationOverlapPenaltyTermTest .................................. Passed 0.04 sec Start 1628: itkMalcolmSparseLevelSetsv4BaseTest 1622/2822 Test #1625: itkLevelSetsv4DenseImageBaseTest .............................................. Passed 0.05 sec Start 1629: itkBinaryImageToWhitakerSparseLevelSetsv4AdaptorTest 1623/2822 Test #1627: itkShiSparseLevelSetsv4BaseTest ............................................... Passed 0.05 sec Start 1630: itkBinaryImageToMalcolmSparseLevelSetsv4AdaptorTest 1624/2822 Test #1626: itkWhitakerSparseLevelSetsv4BaseTest .......................................... Passed 0.07 sec Start 1631: itkBinaryImageToShiSparseLevelSetsv4AdaptorTest 1625/2822 Test #1628: itkMalcolmSparseLevelSetsv4BaseTest ........................................... Passed 0.05 sec Start 1632: itkLevelSetsv4DomainPartitionBaseTest 1626/2822 Test #1632: itkLevelSetsv4DomainPartitionBaseTest ......................................... Passed 0.06 sec Start 1633: itkLevelSetsv4DomainPartitionImageTest 1627/2822 Test #1631: itkBinaryImageToShiSparseLevelSetsv4AdaptorTest ............................... Passed 0.08 sec Start 1634: itkLevelSetsv4DomainPartitionImageWithKdTreeTest 1628/2822 Test #1629: itkBinaryImageToWhitakerSparseLevelSetsv4AdaptorTest .......................... Passed 0.14 sec Start 1635: itkLevelSetsv4DomainMapImageFilterTest 1629/2822 Test #1630: itkBinaryImageToMalcolmSparseLevelSetsv4AdaptorTest ........................... Passed 0.11 sec Start 1636: itkLevelSetsv4SparseLevelSetContainerTest 1630/2822 Test #1633: itkLevelSetsv4DomainPartitionImageTest ........................................ Passed 0.05 sec Start 1637: itkLevelSetsv4DenseLevelSetContainerTest 1631/2822 Test #1634: itkLevelSetsv4DomainPartitionImageWithKdTreeTest .............................. Passed 0.04 sec Start 1638: itkSingleLevelSetsv4DenseImage2DTest 1632/2822 Test #1636: itkLevelSetsv4SparseLevelSetContainerTest ..................................... Passed 0.04 sec Start 1639: itkSingleLevelSetsv4DenseAdvectionImage2DTest_5 1633/2822 Test #1635: itkLevelSetsv4DomainMapImageFilterTest ........................................ Passed 0.05 sec Start 1640: itkSingleLevelSetsv4WhitakerImage2DTest 1634/2822 Test #1637: itkLevelSetsv4DenseLevelSetContainerTest ...................................... Passed 0.04 sec Start 1641: itkSingleLevelSetsv4WhitakerImage2DTestThreads 1635/2822 Test #1639: itkSingleLevelSetsv4DenseAdvectionImage2DTest_5 ............................... Passed 0.07 sec Start 1642: itkSingleLevelSetsv4MalcolmImage2DTest 1636/2822 Test #1642: itkSingleLevelSetsv4MalcolmImage2DTest ........................................ Passed 0.08 sec Start 1643: itkSingleLevelSetsv4ShiImage2DTest 1637/2822 Test #1609: itkLevelSetFunctionTest ....................................................... Passed 1.39 sec Start 1644: itkSingleLevelSetsv4WhitakerImage2DWithCurvatureTest 1638/2822 Test #1643: itkSingleLevelSetsv4ShiImage2DTest ............................................ Passed 0.08 sec Start 1645: itkSingleLevelSetsv4WhitakerImage2DWithLaplacianTest 1639/2822 Test #1640: itkSingleLevelSetsv4WhitakerImage2DTest ....................................... Passed 0.23 sec Start 1646: itkSingleLevelSetsv4WhitakerImage2DWithPropagationTest 1640/2822 Test #1641: itkSingleLevelSetsv4WhitakerImage2DTestThreads ................................ Passed 0.26 sec Start 1647: itkLevelSetsv4EquationCurvatureTermTest 1641/2822 Test #1645: itkSingleLevelSetsv4WhitakerImage2DWithLaplacianTest .......................... Passed 0.05 sec Start 1648: itkLevelSetsv4EquationPropagationTermTest 1642/2822 Test #1646: itkSingleLevelSetsv4WhitakerImage2DWithPropagationTest ........................ Passed 0.04 sec Start 1649: itkLevelSetsv4EquationLaplacianTermTest 1643/2822 Test #1644: itkSingleLevelSetsv4WhitakerImage2DWithCurvatureTest .......................... Passed 0.07 sec Start 1650: itkTwoLevelSetsv4DenseImage2DTest 1644/2822 Test #1647: itkLevelSetsv4EquationCurvatureTermTest ....................................... Passed 0.04 sec Start 1651: itkTwoLevelSetsv4WhitakerImage2DTest 1645/2822 Test #1649: itkLevelSetsv4EquationLaplacianTermTest ....................................... Passed 0.04 sec Start 1652: itkTwoLevelSetsv4MalcolmImage2DTest 1646/2822 Test #1648: itkLevelSetsv4EquationPropagationTermTest ..................................... Passed 0.06 sec Start 1653: itkTwoLevelSetsv4ShiImage2DTest 1647/2822 Test #1652: itkTwoLevelSetsv4MalcolmImage2DTest ........................................... Passed 0.06 sec Start 1654: itkLevelSetsv4EvolutionNumberOfIterationsStoppingCriterionTest 1648/2822 Test #1651: itkTwoLevelSetsv4WhitakerImage2DTest .......................................... Passed 0.08 sec Start 1655: itkMultiLevelSetsv4DenseImageTest 1649/2822 Test #1653: itkTwoLevelSetsv4ShiImage2DTest ............................................... Passed 0.07 sec Start 1656: itkMultiLevelSetsv4DenseImageTwoThreadsTest 1650/2822 Test #1654: itkLevelSetsv4EvolutionNumberOfIterationsStoppingCriterionTest ................ Passed 0.05 sec Start 1657: itkMultiLevelSetsv4ChanAndVeseInternalTermTest 1651/2822 Test #1655: itkMultiLevelSetsv4DenseImageTest ............................................. Passed 0.05 sec Start 1658: itkMultiLevelSetsv4SetEvolutionTest 1652/2822 Test #1656: itkMultiLevelSetsv4DenseImageTwoThreadsTest ................................... Passed 0.04 sec Start 1659: itkMultiLevelSetsv4SetEvolutionTwoThreadsTest 1653/2822 Test #1657: itkMultiLevelSetsv4ChanAndVeseInternalTermTest ................................ Passed 0.04 sec Start 1660: itkMultiLevelSetsv4DenseImageSubset2DTest 1654/2822 Test #1659: itkMultiLevelSetsv4SetEvolutionTwoThreadsTest ................................. Passed 0.04 sec Start 1661: itkMultiLevelSetsv4WhitakerImageSubset2DTest 1655/2822 Test #1658: itkMultiLevelSetsv4SetEvolutionTest ........................................... Passed 0.07 sec Start 1662: itkMultiLevelSetsv4ShiImageSubset2DTest 1656/2822 Test #1650: itkTwoLevelSetsv4DenseImage2DTest ............................................. Passed 0.26 sec Start 1663: itkMultiLevelSetsv4MalcolmImageSubset2DTest 1657/2822 Test #1638: itkSingleLevelSetsv4DenseImage2DTest .......................................... Passed 0.65 sec Start 1664: itkMRFImageFilterTest 1658/2822 Test #1664: itkMRFImageFilterTest ......................................................... Passed 0.05 sec Start 1665: itkGibbsTest 1659/2822 Test #1665: itkGibbsTest .................................................................. Passed 0.03 sec Start 1666: itkClosingByReconstructionImageFilterTest 1660/2822 Test #1611: itkCannySegmentationLevelSetImageFilterTest ................................... Passed 1.92 sec Start 1667: itkClosingByReconstructionImageFilterTest2 1661/2822 Test #1666: itkClosingByReconstructionImageFilterTest ..................................... Passed 0.12 sec Start 1668: itkFlatStructuringElementTest 1662/2822 Test #1668: itkFlatStructuringElementTest ................................................. Passed 0.06 sec Start 1669: itkFlatStructuringElementTest2 1663/2822 Test #1667: itkClosingByReconstructionImageFilterTest2 .................................... Passed 0.11 sec Start 1670: itkFlatStructuringElementTest3_1 1664/2822 Test #1669: itkFlatStructuringElementTest2 ................................................ Passed 0.04 sec Start 1671: itkFlatStructuringElementTest3_2 1665/2822 Test #1671: itkFlatStructuringElementTest3_2 .............................................. Passed 0.04 sec Start 1672: itkGrayscaleConnectedClosingImageFilterTest 1666/2822 Test #1670: itkFlatStructuringElementTest3_1 .............................................. Passed 0.06 sec Start 1673: itkGrayscaleConnectedClosingImageFilterTest2 1667/2822 Test #1672: itkGrayscaleConnectedClosingImageFilterTest ................................... Passed 0.05 sec Start 1674: itkGrayscaleConnectedOpeningImageFilterTest 1668/2822 Test #1673: itkGrayscaleConnectedClosingImageFilterTest2 .................................. Passed 0.09 sec Start 1675: itkGrayscaleConnectedOpeningImageFilterTest2 1669/2822 Test #1674: itkGrayscaleConnectedOpeningImageFilterTest ................................... Passed 0.09 sec Start 1676: itkGrayscaleFillholeImageFilterTest 1670/2822 Test #1675: itkGrayscaleConnectedOpeningImageFilterTest2 .................................. Passed 0.07 sec Start 1677: itkGrayscaleFunctionDilateImageFilterTest 1671/2822 Test #1676: itkGrayscaleFillholeImageFilterTest ........................................... Passed 0.07 sec Start 1678: itkGrayscaleFunctionErodeImageFilterTest 1672/2822 Test #1677: itkGrayscaleFunctionDilateImageFilterTest ..................................... Passed 0.06 sec Start 1679: itkGrayscaleMorphologicalClosingImageFilterTest 1673/2822 Test #1678: itkGrayscaleFunctionErodeImageFilterTest ...................................... Passed 0.07 sec Start 1680: itkGrayscaleMorphologicalOpeningImageFilterTest 1674/2822 Test #1660: itkMultiLevelSetsv4DenseImageSubset2DTest ..................................... Passed 0.80 sec Start 1681: itkGrayscaleGeodesicErodeDilateImageFilterTest 1675/2822 Test #1679: itkGrayscaleMorphologicalClosingImageFilterTest ............................... Passed 0.09 sec Start 1682: itkHConcaveImageFilterTestFullyConnectedOff 1676/2822 Test #1682: itkHConcaveImageFilterTestFullyConnectedOff ................................... Passed 0.05 sec Start 1683: itkHConcaveImageFilterTestFullyConnectedOn 1677/2822 Test #1680: itkGrayscaleMorphologicalOpeningImageFilterTest ............................... Passed 0.08 sec Start 1684: itkHConvexImageFilterTestFullyConnectedOff 1678/2822 Test #1683: itkHConcaveImageFilterTestFullyConnectedOn .................................... Passed 0.05 sec Start 1685: itkHConvexImageFilterTestFullyConnectedOn 1679/2822 Test #1684: itkHConvexImageFilterTestFullyConnectedOff .................................... Passed 0.10 sec Start 1686: itkHConvexConcaveImageFilterTest 1680/2822 Test #1685: itkHConvexImageFilterTestFullyConnectedOn ..................................... Passed 0.05 sec Start 1687: itkHMaximaImageFilterTestFullyConnectedOff 1681/2822 Test #1681: itkGrayscaleGeodesicErodeDilateImageFilterTest ................................ Passed 0.21 sec Start 1688: itkHMaximaImageFilterTestFullyConnectedOn 1682/2822 Test #1687: itkHMaximaImageFilterTestFullyConnectedOff .................................... Passed 0.06 sec Start 1689: itkHMinimaImageFilterTestFullyConnectedOff 1683/2822 Test #1686: itkHConvexConcaveImageFilterTest .............................................. Passed 0.11 sec Start 1690: itkHMinimaImageFilterTestFullyConnectedOn 1684/2822 Test #1689: itkHMinimaImageFilterTestFullyConnectedOff .................................... Passed 0.05 sec Start 1691: itkHMaximaMinimaImageFilterTest 1685/2822 Test #1688: itkHMaximaImageFilterTestFullyConnectedOn ..................................... Passed 0.06 sec Start 1692: itkHMaximaMinimaImageFilterTest2 1686/2822 Test #1691: itkHMaximaMinimaImageFilterTest ............................................... Passed 0.05 sec Start 1693: itkMorphologicalGradientImageFilterTest 1687/2822 Test #1692: itkHMaximaMinimaImageFilterTest2 .............................................. Passed 0.05 sec Start 1694: itkMorphologicalGradientImageFilterTest2 1688/2822 Test #1690: itkHMinimaImageFilterTestFullyConnectedOn ..................................... Passed 0.07 sec Start 1695: itkOpeningByReconstructionImageFilterTest 1689/2822 Test #1693: itkMorphologicalGradientImageFilterTest ....................................... Passed 0.07 sec Start 1696: itkOpeningByReconstructionImageFilterTest2 1690/2822 Test #1694: itkMorphologicalGradientImageFilterTest2 ...................................... Passed 0.11 sec Start 1697: itkOpeningByReconstructionImageFilterTestNoInput 1691/2822 Test #1697: itkOpeningByReconstructionImageFilterTestNoInput .............................. Passed 0.05 sec Start 1698: itkOpeningByReconstructionImageFilterTestNoInput2 1692/2822 Test #1698: itkOpeningByReconstructionImageFilterTestNoInput2 ............................. Passed 0.05 sec Start 1699: itkDoubleThresholdImageFilterTest 1693/2822 Test #1662: itkMultiLevelSetsv4ShiImageSubset2DTest ....................................... Passed 1.33 sec Start 1700: itkDoubleThresholdImageFilterTest2 1694/2822 Test #1699: itkDoubleThresholdImageFilterTest ............................................. Passed 0.07 sec Start 1701: itkRemoveBoundaryObjectsTest 1695/2822 Test #1695: itkOpeningByReconstructionImageFilterTest ..................................... Passed 0.27 sec Start 1702: itkRemoveBoundaryObjectsTest2 1696/2822 Test #1700: itkDoubleThresholdImageFilterTest2 ............................................ Passed 0.05 sec Start 1703: itkShapedIteratorFromStructuringElementTest 1697/2822 Test #1702: itkRemoveBoundaryObjectsTest2 ................................................. Passed 0.05 sec Start 1704: itkBlackTopHatImageFilterTest 1698/2822 Test #1703: itkShapedIteratorFromStructuringElementTest ................................... Passed 0.05 sec Start 1705: itkWhiteTopHatImageFilterTest 1699/2822 Test #1696: itkOpeningByReconstructionImageFilterTest2 .................................... Passed 0.29 sec Start 1706: itkGrayscaleMorphologicalClosingImageFilterTest2 1700/2822 Test #1701: itkRemoveBoundaryObjectsTest .................................................. Passed 0.08 sec Start 1707: itkGrayscaleMorphologicalClosingImageFilterTest2SafeBorder 1701/2822 Test #1704: itkBlackTopHatImageFilterTest ................................................. Passed 0.08 sec Start 1708: itkGrayscaleMorphologicalOpeningImageFilterTest2 1702/2822 Test #1705: itkWhiteTopHatImageFilterTest ................................................. Passed 0.16 sec Start 1709: itkGrayscaleMorphologicalOpeningImageFilterTest2SafeBorder 1703/2822 Test #1707: itkGrayscaleMorphologicalClosingImageFilterTest2SafeBorder .................... Passed 1.91 sec Start 1710: itkGrayscaleDilateImageFilterTest 1704/2822 Test #1710: itkGrayscaleDilateImageFilterTest ............................................. Passed 0.29 sec Start 1711: itkGrayscaleErodeImageFilterTest 1705/2822 Test #1706: itkGrayscaleMorphologicalClosingImageFilterTest2 .............................. Passed 2.23 sec Start 1712: itkMapGrayscaleMorphologicalClosingImageFilterTest 1706/2822 Test #1709: itkGrayscaleMorphologicalOpeningImageFilterTest2SafeBorder .................... Passed 2.11 sec Start 1713: itkMapGrayscaleMorphologicalClosingImageFilterTestSafeBorder 1707/2822 Test #1708: itkGrayscaleMorphologicalOpeningImageFilterTest2 .............................. Passed 2.33 sec Start 1714: itkMapGrayscaleMorphologicalOpeningImageFilterTest 1708/2822 Test #1711: itkGrayscaleErodeImageFilterTest .............................................. Passed 0.20 sec Start 1715: itkMapGrayscaleMorphologicalOpeningImageFilterTestSafeBorder 1709/2822 Test #1715: itkMapGrayscaleMorphologicalOpeningImageFilterTestSafeBorder .................. Passed 2.13 sec Start 1716: itkMapGrayscaleDilateImageFilterTest 1710/2822 Test #1713: itkMapGrayscaleMorphologicalClosingImageFilterTestSafeBorder .................. Passed 2.31 sec Start 1717: itkMapGrayscaleErodeImageFilterTest 1711/2822 Test #1717: itkMapGrayscaleErodeImageFilterTest ........................................... Passed 0.27 sec Start 1718: itkRegionalMinimaImageFilterTest1 1712/2822 Test #1479: itkRegionGrow2DTest ........................................................... Passed 10.23 sec Start 1719: itkRegionalMinimaImageFilterTest2 1713/2822 Test #1716: itkMapGrayscaleDilateImageFilterTest .......................................... Passed 0.31 sec Start 1720: itkRegionalMaximaImageFilterTest1 1714/2822 Test #1712: itkMapGrayscaleMorphologicalClosingImageFilterTest ............................ Passed 2.63 sec Start 1721: itkRegionalMaximaImageFilterTest2 1715/2822 Test #1714: itkMapGrayscaleMorphologicalOpeningImageFilterTest ............................ Passed 2.49 sec Start 1722: itkValuedRegionalMaximaImageFilterTest 1716/2822 Test #1719: itkRegionalMinimaImageFilterTest2 ............................................. Passed 0.09 sec Start 1723: itkValuedRegionalMaximaImageFilterTest2 1717/2822 Test #1718: itkRegionalMinimaImageFilterTest1 ............................................. Passed 0.10 sec Start 1724: itkValuedRegionalMinimaImageFilterTest 1718/2822 Test #1721: itkRegionalMaximaImageFilterTest2 ............................................. Passed 0.09 sec Start 1725: itkValuedRegionalMinimaImageFilterTest2 1719/2822 Test #1720: itkRegionalMaximaImageFilterTest1 ............................................. Passed 0.10 sec Start 1726: itkMeshTest 1720/2822 Test #1722: itkValuedRegionalMaximaImageFilterTest ........................................ Passed 0.10 sec Start 1727: itkSimplexMeshTest 1721/2822 Test #1726: itkMeshTest ................................................................... Passed 0.05 sec Start 1728: itkAutomaticTopologyMeshSourceTest 1722/2822 Test #1723: itkValuedRegionalMaximaImageFilterTest2 ....................................... Passed 0.09 sec Start 1729: itkBinaryMask3DMeshSourceTest 1723/2822 Test #1725: itkValuedRegionalMinimaImageFilterTest2 ....................................... Passed 0.09 sec Start 1730: itkImageToParametricSpaceFilterTest 1724/2822 Test #1728: itkAutomaticTopologyMeshSourceTest ............................................ Passed 0.04 sec Start 1731: itkInteriorExteriorMeshFilterTest 1725/2822 Test #1724: itkValuedRegionalMinimaImageFilterTest ........................................ Passed 0.11 sec Start 1732: itkRegularSphereMeshSourceTest 1726/2822 Test #1727: itkSimplexMeshTest ............................................................ Passed 0.06 sec Start 1733: itkRegularSphereMeshSourceTest2 1727/2822 Test #1732: itkRegularSphereMeshSourceTest ................................................ Passed 0.03 sec Start 1734: itkSimplexMeshAdaptTopologyFilterTest 1728/2822 Test #1731: itkInteriorExteriorMeshFilterTest ............................................. Passed 0.04 sec Start 1735: itkSimplexMeshToTriangleMeshFilterTest 1729/2822 Test #1730: itkImageToParametricSpaceFilterTest ........................................... Passed 0.05 sec Start 1736: itkSimplexMeshVolumeCalculatorTest 1730/2822 Test #1733: itkRegularSphereMeshSourceTest2 ............................................... Passed 0.04 sec Start 1737: itkSphereMeshSourceTest 1731/2822 Test #1729: itkBinaryMask3DMeshSourceTest ................................................. Passed 0.11 sec Start 1738: itkTransformMeshFilterTest 1732/2822 Test #1735: itkSimplexMeshToTriangleMeshFilterTest ........................................ Passed 0.04 sec Start 1739: itkTriangleMeshToBinaryImageFilterTest 1733/2822 Test #1737: itkSphereMeshSourceTest ....................................................... Passed 0.04 sec Start 1740: itkTriangleMeshToBinaryImageFilterTest1 1734/2822 Test #1734: itkSimplexMeshAdaptTopologyFilterTest ......................................... Passed 0.07 sec Start 1741: itkTriangleMeshToBinaryImageFilterTest2 1735/2822 Test #1738: itkTransformMeshFilterTest .................................................... Passed 0.04 sec Start 1742: itkTriangleMeshToBinaryImageFilterTest3 1736/2822 Test #1739: itkTriangleMeshToBinaryImageFilterTest ........................................ Passed 0.05 sec Start 1743: itkTriangleMeshToBinaryImageFilterTest4 1737/2822 Test #1661: itkMultiLevelSetsv4WhitakerImageSubset2DTest .................................. Passed 6.69 sec Start 1744: itkTriangleMeshToSimplexMeshFilterTest 1738/2822 Test #1740: itkTriangleMeshToBinaryImageFilterTest1 ....................................... Passed 0.07 sec Start 1745: itkVTKPolyDataReaderTest 1739/2822 Test #1741: itkTriangleMeshToBinaryImageFilterTest2 ....................................... Passed 0.07 sec Start 1746: itkVTKPolyDataReaderTest2 1740/2822 Test #1744: itkTriangleMeshToSimplexMeshFilterTest ........................................ Passed 0.04 sec Start 1747: itkVTKPolyDataReaderBadTest0 1741/2822 Test #1745: itkVTKPolyDataReaderTest ...................................................... Passed 0.05 sec Start 1748: itkVTKPolyDataReaderBadTest1 1742/2822 Test #1748: itkVTKPolyDataReaderBadTest1 .................................................. Passed 0.03 sec Start 1749: itkVTKPolyDataReaderBadTest2 1743/2822 Test #1746: itkVTKPolyDataReaderTest2 ..................................................... Passed 0.06 sec Start 1750: itkVTKPolyDataReaderBadTest3 1744/2822 Test #1747: itkVTKPolyDataReaderBadTest0 .................................................. Passed 0.05 sec Start 1751: itkVTKPolyDataReaderBadTest4 1745/2822 Test #1742: itkTriangleMeshToBinaryImageFilterTest3 ....................................... Passed 0.14 sec Start 1752: itkVTKPolyDataReaderBadTest5 1746/2822 Test #1749: itkVTKPolyDataReaderBadTest2 .................................................. Passed 0.04 sec Start 1753: itkVTKPolyDataReaderBadTest6 1747/2822 Test #1750: itkVTKPolyDataReaderBadTest3 .................................................. Passed 0.04 sec Start 1754: itkVTKPolyDataReaderBadTest7 1748/2822 Test #1751: itkVTKPolyDataReaderBadTest4 .................................................. Passed 0.04 sec Start 1755: itkVTKPolyDataReaderBadTest8 1749/2822 Test #1743: itkTriangleMeshToBinaryImageFilterTest4 ....................................... Passed 0.16 sec Start 1756: itkVTKPolyDataReaderBadTest9 1750/2822 Test #1752: itkVTKPolyDataReaderBadTest5 .................................................. Passed 0.05 sec Start 1757: itkVTKPolyDataReaderBadTest10 1751/2822 Test #1754: itkVTKPolyDataReaderBadTest7 .................................................. Passed 0.05 sec Start 1758: itkVTKPolyDataReaderBadTest11 1752/2822 Test #1755: itkVTKPolyDataReaderBadTest8 .................................................. Passed 0.05 sec Start 1759: itkVTKPolyDataReaderBadTest12 1753/2822 Test #1756: itkVTKPolyDataReaderBadTest9 .................................................. Passed 0.05 sec Start 1760: itkVTKPolyDataReaderBadTest13 1754/2822 Test #1753: itkVTKPolyDataReaderBadTest6 .................................................. Passed 0.07 sec Start 1761: itkVTKPolyDataReaderBadTest14 1755/2822 Test #1757: itkVTKPolyDataReaderBadTest10 ................................................. Passed 0.05 sec Start 1762: itkVTKPolyDataReaderBadTest15 1756/2822 Test #1758: itkVTKPolyDataReaderBadTest11 ................................................. Passed 0.04 sec Start 1763: itkVTKPolyDataReaderBadTest16 1757/2822 Test #1759: itkVTKPolyDataReaderBadTest12 ................................................. Passed 0.04 sec Start 1764: itkVTKPolyDataReaderBadTest17 1758/2822 Test #1760: itkVTKPolyDataReaderBadTest13 ................................................. Passed 0.04 sec Start 1765: itkVTKPolyDataWriterTest01 1759/2822 Test #1761: itkVTKPolyDataReaderBadTest14 ................................................. Passed 0.05 sec Start 1766: itkVTKPolyDataWriterTest02 1760/2822 Test #1762: itkVTKPolyDataReaderBadTest15 ................................................. Passed 0.05 sec Start 1767: itkWarpMeshFilterTest 1761/2822 Test #1763: itkVTKPolyDataReaderBadTest16 ................................................. Passed 0.05 sec Start 1768: itkDynamicMeshTest 1762/2822 Test #1764: itkVTKPolyDataReaderBadTest17 ................................................. Passed 0.05 sec Start 1769: itkExtractMeshConnectedRegionsTest 1763/2822 Test #1766: itkVTKPolyDataWriterTest02 .................................................... Passed 0.04 sec Start 1770: itkMeshFstreamTest 1764/2822 Test #1765: itkVTKPolyDataWriterTest01 .................................................... Passed 0.04 sec Start 1771: itkMeshSourceGraftOutputTest 1765/2822 Test #1767: itkWarpMeshFilterTest ......................................................... Passed 0.05 sec Start 1772: itkMeshSpatialObjectIOTest 1766/2822 Test #1768: itkDynamicMeshTest ............................................................ Passed 0.04 sec Start 1773: itkMeshSpatialObjectIOTest1 1767/2822 Test #1736: itkSimplexMeshVolumeCalculatorTest ............................................ Passed 0.42 sec Start 1774: itkMeshSpatialObjectIOTest2 1768/2822 Test #1770: itkMeshFstreamTest ............................................................ Passed 0.04 sec Start 1775: itkParametricSpaceToImageSpaceMeshFilterTest 1769/2822 Test #1769: itkExtractMeshConnectedRegionsTest ............................................ Passed 0.05 sec Start 1776: itkTriangleMeshToSimplexMeshFilter2Test 1770/2822 Test #1771: itkMeshSourceGraftOutputTest .................................................. Passed 0.05 sec Start 1777: itkNewTest 1771/2822 Test #1772: itkMeshSpatialObjectIOTest .................................................... Passed 0.05 sec Start 1778: itkCellInterfaceTest 1772/2822 Test #1774: itkMeshSpatialObjectIOTest2 ................................................... Passed 0.04 sec Start 1779: itkTriangleCellTest 1773/2822 Test #1773: itkMeshSpatialObjectIOTest1 ................................................... Passed 0.05 sec Start 1780: itkQuadrilateralCellTest 1774/2822 Test #1777: itkNewTest .................................................................... Passed 0.04 sec Start 1781: ITKOptimizersv4InDoxygenGroup 1775/2822 Test #1778: itkCellInterfaceTest .......................................................... Passed 0.03 sec Start 1782: ITKMetricsv4InDoxygenGroup 1776/2822 Test #1779: itkTriangleCellTest ........................................................... Passed 0.05 sec Start 1783: itkEuclideanDistancePointSetMetricTest 1777/2822 Test #1775: itkParametricSpaceToImageSpaceMeshFilterTest .................................. Passed 0.08 sec Start 1784: itkEuclideanDistancePointSetMetricTest2 1778/2822 Test #1776: itkTriangleMeshToSimplexMeshFilter2Test ....................................... Passed 0.08 sec Start 1785: itkExpectationBasedPointSetMetricTest 1779/2822 Test #1780: itkQuadrilateralCellTest ...................................................... Passed 0.05 sec Start 1786: itkJensenHavrdaCharvatTsallisPointSetMetricTest 1780/2822 Test #1781: ITKOptimizersv4InDoxygenGroup ................................................. Passed 0.03 sec Start 1787: itkJensenHavrdaCharvatTsallisPointSetMetricRegistrationTest 1781/2822 Test #1782: ITKMetricsv4InDoxygenGroup .................................................... Passed 0.03 sec Start 1788: itkLabeledPointSetMetricTest 1782/2822 Test #1783: itkEuclideanDistancePointSetMetricTest ........................................ Passed 0.06 sec Start 1789: itkLabeledPointSetMetricRegistrationTest 1783/2822 Test #1785: itkExpectationBasedPointSetMetricTest ......................................... Passed 0.05 sec Start 1790: itkImageToImageMetricv4Test 1784/2822 Test #1788: itkLabeledPointSetMetricTest .................................................. Passed 0.05 sec Start 1791: itkJointHistogramMutualInformationImageToImageMetricv4Test 1785/2822 Test #1787: itkJensenHavrdaCharvatTsallisPointSetMetricRegistrationTest ................... Passed 0.07 sec Start 1792: itkJointHistogramMutualInformationImageToImageRegistrationTest 1786/2822 Test #1789: itkLabeledPointSetMetricRegistrationTest ...................................... Passed 0.06 sec Start 1793: itkJointHistogramMutualInformationImageToImageRegistrationTest2 1787/2822 Test #1791: itkJointHistogramMutualInformationImageToImageMetricv4Test .................... Passed 0.06 sec Start 1794: itkMeanSquaresImageToImageMetricv4Test 1788/2822 Test #1786: itkJensenHavrdaCharvatTsallisPointSetMetricTest ............................... Passed 0.12 sec Start 1795: itkCorrelationImageToImageMetricv4Test 1789/2822 Test #1784: itkEuclideanDistancePointSetMetricTest2 ....................................... Passed 0.15 sec Start 1796: itkMeanSquaresImageToImageMetricv4OnVectorTest 1790/2822 Test #1794: itkMeanSquaresImageToImageMetricv4Test ........................................ Passed 0.05 sec Start 1797: itkMeanSquaresImageToImageMetricv4OnVectorTest2 1791/2822 Test #1790: itkImageToImageMetricv4Test ................................................... Passed 0.13 sec Start 1798: itkANTSNeighborhoodCorrelationImageToImageMetricv4Test 1792/2822 Test #1796: itkMeanSquaresImageToImageMetricv4OnVectorTest ................................ Passed 0.07 sec Start 1799: itkANTSNeighborhoodCorrelationImageToImageRegistrationTest 1793/2822 Test #1797: itkMeanSquaresImageToImageMetricv4OnVectorTest2 ............................... Passed 0.06 sec Start 1800: itkMattesMutualInformationImageToImageMetricv4Test 1794/2822 Test #1798: itkANTSNeighborhoodCorrelationImageToImageMetricv4Test ........................ Passed 0.05 sec Start 1801: itkMattesMutualInformationImageToImageMetricv4RegistrationTest 1795/2822 Test #1795: itkCorrelationImageToImageMetricv4Test ........................................ Passed 0.12 sec Start 1802: itkMultiStartImageToImageMetricv4RegistrationTest 1796/2822 Test #1801: itkMattesMutualInformationImageToImageMetricv4RegistrationTest ................ Passed 0.20 sec Start 1803: itkMultiGradientImageToImageMetricv4RegistrationTest 1797/2822 Test #1803: itkMultiGradientImageToImageMetricv4RegistrationTest .......................... Passed 0.19 sec Start 1804: itkMetricImageGradientTest 1798/2822 Test #1793: itkJointHistogramMutualInformationImageToImageRegistrationTest2 ............... Passed 0.52 sec Start 1805: itkMeanSquaresImageToImageMetricv4RegistrationTest 1799/2822 Test #1792: itkJointHistogramMutualInformationImageToImageRegistrationTest ................ Passed 0.60 sec Start 1806: itkMeanSquaresImageToImageMetricv4RegistrationTest2 1800/2822 Test #1799: itkANTSNeighborhoodCorrelationImageToImageRegistrationTest .................... Passed 0.53 sec Start 1807: itkImageToImageMetricv4RegistrationTest 1801/2822 Test #1806: itkMeanSquaresImageToImageMetricv4RegistrationTest2 ........................... Passed 0.15 sec Start 1808: itkImageToImageMetricv4RegistrationTest2 1802/2822 Test #1805: itkMeanSquaresImageToImageMetricv4RegistrationTest ............................ Passed 0.35 sec Start 1809: itkImageToImageMetricv4RegistrationTest3 1803/2822 Test #1802: itkMultiStartImageToImageMetricv4RegistrationTest ............................. Passed 0.75 sec Start 1810: itkDemonsImageToImageMetricv4Test 1804/2822 Test #1810: itkDemonsImageToImageMetricv4Test ............................................. Passed 0.05 sec Start 1811: itkDemonsImageToImageMetricv4RegistrationTest 1805/2822 Test #1800: itkMattesMutualInformationImageToImageMetricv4Test ............................ Passed 1.78 sec Start 1812: itkDemonsImageToImageMetricv4RegistrationTest2 1806/2822 Test #1804: itkMetricImageGradientTest .................................................... Passed 1.71 sec Start 1813: itkDemonsImageToImageMetricv4RegistrationTest3 1807/2822 Test #1808: itkImageToImageMetricv4RegistrationTest2 ...................................... Passed 1.86 sec Start 1814: itkEuclideanDistancePointSetMetricRegistrationTest 1808/2822 Test #1814: itkEuclideanDistancePointSetMetricRegistrationTest ............................ Passed 0.27 sec Start 1815: itkExpectationBasedPointSetMetricRegistrationTest 1809/2822 Test #1815: itkExpectationBasedPointSetMetricRegistrationTest ............................. Passed 0.05 sec Start 1816: itkObjectToObjectMultiMetricv4Test 1810/2822 Test #1809: itkImageToImageMetricv4RegistrationTest3 ...................................... Passed 2.61 sec Start 1817: itkObjectToObjectMultiMetricv4RegistrationTest 1811/2822 Test #1807: itkImageToImageMetricv4RegistrationTest ....................................... Passed 3.95 sec Start 1818: itkMeanSquaresImageToImageMetricv4VectorRegistrationTest 1812/2822 Test #1817: itkObjectToObjectMultiMetricv4RegistrationTest ................................ Passed 2.27 sec Start 1819: itkNarrowBandTest 1813/2822 Test #1819: itkNarrowBandTest ............................................................. Passed 0.05 sec Start 1820: itkNarrowBandImageFilterBaseTest 1814/2822 Test #1812: itkDemonsImageToImageMetricv4RegistrationTest2 ................................ Passed 4.00 sec Start 1821: NNetClassifierTest1 1815/2822 Test #1820: itkNarrowBandImageFilterBaseTest .............................................. Passed 0.11 sec Start 1822: NNetClassifierTest2 1816/2822 Test #1822: NNetClassifierTest2 ........................................................... Passed 0.11 sec Start 1823: NNetClassifierTest3 1817/2822 Test #1823: NNetClassifierTest3 ........................................................... Passed 0.21 sec Start 1824: NNetClassifierTest4 1818/2822 Test #1811: itkDemonsImageToImageMetricv4RegistrationTest ................................. Passed 5.37 sec Start 1825: RBFTest1 1819/2822 Test #1825: RBFTest1 ...................................................................... Passed 0.06 sec Start 1826: QPropXORTest1 1820/2822 Test #1826: QPropXORTest1 ................................................................. Passed 0.05 sec Start 1827: XORTest1 1821/2822 Test #1827: XORTest1 ...................................................................... Passed 0.04 sec Start 1828: XORTest2 1822/2822 Test #1828: XORTest2 ...................................................................... Passed 0.18 sec Start 1829: itkLogSigmoidTransferFunctionTest 1823/2822 Test #1813: itkDemonsImageToImageMetricv4RegistrationTest3 ................................ Passed 4.44 sec Start 1830: itkSigmoidTransferFunctionTest 1824/2822 Test #1829: itkLogSigmoidTransferFunctionTest ............................................. Passed 0.04 sec Start 1831: itkOptimizersHierarchyTest 1825/2822 Test #1830: itkSigmoidTransferFunctionTest ................................................ Passed 0.04 sec Start 1832: itkFRPROptimizerTest 1826/2822 Test #1831: itkOptimizersHierarchyTest .................................................... Passed 0.05 sec Start 1833: itkPowellOptimizerTest 1827/2822 Test #1832: itkFRPROptimizerTest .......................................................... Passed 0.04 sec Start 1834: itkGradientDescentOptimizerTest 1828/2822 Test #1833: itkPowellOptimizerTest ........................................................ Passed 0.04 sec Start 1835: itkVersorTransformOptimizerTest 1829/2822 Test #1834: itkGradientDescentOptimizerTest ............................................... Passed 0.04 sec Start 1836: itkSPSAOptimizerTest 1830/2822 Test #1835: itkVersorTransformOptimizerTest ............................................... Passed 0.04 sec Start 1837: itkExhaustiveOptimizerTest 1831/2822 Test #1836: itkSPSAOptimizerTest .......................................................... Passed 0.05 sec Start 1838: itkLBFGSBOptimizerTest 1832/2822 Test #1837: itkExhaustiveOptimizerTest .................................................... Passed 0.04 sec Start 1839: itkConjugateGradientOptimizerTest 1833/2822 Test #1838: itkLBFGSBOptimizerTest ........................................................ Passed 0.05 sec Start 1840: itkLBFGSOptimizerTest 1834/2822 Test #1839: itkConjugateGradientOptimizerTest ............................................. Passed 0.04 sec Start 1841: itkCumulativeGaussianOptimizerTest 1835/2822 Test #1841: itkCumulativeGaussianOptimizerTest ............................................ Passed 0.04 sec Start 1842: itkRegularStepGradientDescentOptimizerTest 1836/2822 Test #1840: itkLBFGSOptimizerTest ......................................................... Passed 0.05 sec Start 1843: itkLevenbergMarquardtOptimizerTest 1837/2822 Test #1821: NNetClassifierTest1 ........................................................... Passed 1.07 sec Start 1844: itkVersorRigid3DTransformOptimizerTest 1838/2822 Test #1842: itkRegularStepGradientDescentOptimizerTest .................................... Passed 0.05 sec Start 1845: itkAmoebaOptimizerTest 1839/2822 Test #1843: itkLevenbergMarquardtOptimizerTest ............................................ Passed 0.05 sec Start 1846: itkParticleSwarmOptimizerTest 1840/2822 Test #1844: itkVersorRigid3DTransformOptimizerTest ........................................ Passed 0.04 sec Start 1847: itkInitializationBiasedParticleSwarmOptimizerTest 1841/2822 Test #1846: itkParticleSwarmOptimizerTest ................................................. Passed 0.05 sec Start 1848: itkOnePlusOneEvolutionaryOptimizerTest 1842/2822 Test #1845: itkAmoebaOptimizerTest ........................................................ Passed 0.06 sec Start 1849: itkWindowConvergenceMonitoringFunctionTest 1843/2822 Test #1848: itkOnePlusOneEvolutionaryOptimizerTest ........................................ Passed 0.04 sec Start 1850: itkObjectToObjectOptimizerBaseTest 1844/2822 Test #1850: itkObjectToObjectOptimizerBaseTest ............................................ Passed 0.04 sec Start 1851: itkGradientDescentOptimizerBasev4Test 1845/2822 Test #1849: itkWindowConvergenceMonitoringFunctionTest .................................... Passed 0.08 sec Start 1852: itkGradientDescentOptimizerv4Test 1846/2822 Test #1851: itkGradientDescentOptimizerBasev4Test ......................................... Passed 0.03 sec Start 1853: itkGradientDescentLineSearchOptimizerv4Test 1847/2822 Test #1853: itkGradientDescentLineSearchOptimizerv4Test ................................... Passed 0.03 sec Start 1854: itkConjugateGradientLineSearchOptimizerv4Test 1848/2822 Test #1847: itkInitializationBiasedParticleSwarmOptimizerTest ............................. Passed 0.19 sec Start 1855: itkMultiStartOptimizerv4Test 1849/2822 Test #1855: itkMultiStartOptimizerv4Test .................................................. Passed 0.03 sec Start 1856: itkMultiGradientOptimizerv4Test 1850/2822 Test #1854: itkConjugateGradientLineSearchOptimizerv4Test ................................. Passed 0.06 sec Start 1857: itkOptimizerParameterScalesEstimatorTest 1851/2822 Test #1856: itkMultiGradientOptimizerv4Test ............................................... Passed 0.05 sec Start 1858: itkRegistrationParameterScalesEstimatorTest 1852/2822 Test #1857: itkOptimizerParameterScalesEstimatorTest ...................................... Passed 0.04 sec Start 1859: itkRegistrationParameterScalesFromPhysicalShiftTest 1853/2822 Test #1858: itkRegistrationParameterScalesEstimatorTest ................................... Passed 0.04 sec Start 1860: itkRegistrationParameterScalesFromJacobianTest 1854/2822 Test #1859: itkRegistrationParameterScalesFromPhysicalShiftTest ........................... Passed 0.04 sec Start 1861: itkGradientDescentOptimizerv4Test2 1855/2822 Test #1860: itkRegistrationParameterScalesFromJacobianTest ................................ Passed 0.04 sec Start 1862: itkAutoScaledGradientDescentRegistrationTest 1856/2822 Test #1861: itkGradientDescentOptimizerv4Test2 ............................................ Passed 0.04 sec Start 1863: itkAutoScaledGradientDescentRegistrationTest2 1857/2822 Test #1852: itkGradientDescentOptimizerv4Test ............................................. Passed 0.26 sec Start 1864: itkAutoScaledGradientDescentRegistrationTest3 1858/2822 Test #1864: itkAutoScaledGradientDescentRegistrationTest3 ................................. Passed 0.25 sec Start 1865: itkAutoScaledGradientDescentRegistrationTest4 1859/2822 Test #1863: itkAutoScaledGradientDescentRegistrationTest2 ................................. Passed 0.27 sec Start 1866: itkQuasiNewtonOptimizerv4Test 1860/2822 Test #1862: itkAutoScaledGradientDescentRegistrationTest .................................. Passed 0.32 sec Start 1867: itkRegistrationParameterScalesFromIndexShiftTest 1861/2822 Test #1867: itkRegistrationParameterScalesFromIndexShiftTest .............................. Passed 0.04 sec Start 1868: itkRegistrationParameterScalesFromPhysicalShiftPointSetTest 1862/2822 Test #1868: itkRegistrationParameterScalesFromPhysicalShiftPointSetTest ................... Passed 0.04 sec Start 1869: itkObjectToObjectMetricBaseTest 1863/2822 Test #1869: itkObjectToObjectMetricBaseTest ............................................... Passed 0.04 sec Start 1870: itkLBFGSOptimizerv4Test 1864/2822 Test #1824: NNetClassifierTest4 ........................................................... Passed 1.57 sec Start 1871: itkLBFGSBOptimizerv4Test 1865/2822 Test #1866: itkQuasiNewtonOptimizerv4Test ................................................. Passed 0.15 sec Start 1872: itkAmoebaOptimizerv4Test 1866/2822 Test #1872: itkAmoebaOptimizerv4Test ...................................................... Passed 0.03 sec Start 1873: itkExhaustiveOptimizerv4Test 1867/2822 Test #1870: itkLBFGSOptimizerv4Test ....................................................... Passed 0.05 sec Start 1874: itkPowellOptimizerv4Test 1868/2822 Test #1871: itkLBFGSBOptimizerv4Test ...................................................... Passed 0.05 sec Start 1875: itkOnePlusOneEvolutionaryOptimizerv4Test 1869/2822 Test #1873: itkExhaustiveOptimizerv4Test .................................................. Passed 0.04 sec Start 1876: itkRegularStepGradientDescentOptimizerv4Test 1870/2822 Test #1874: itkPowellOptimizerv4Test ...................................................... Passed 0.04 sec Start 1877: itkDemonsRegistrationFilterTest 1871/2822 Test #1875: itkOnePlusOneEvolutionaryOptimizerv4Test ...................................... Passed 0.05 sec Start 1878: itkLevelSetMotionRegistrationFilterTest 1872/2822 Test #1865: itkAutoScaledGradientDescentRegistrationTest4 ................................. Passed 0.29 sec Start 1879: itkSymmetricForcesDemonsRegistrationFilterTest 1873/2822 Test #1876: itkRegularStepGradientDescentOptimizerv4Test .................................. Passed 0.05 sec Start 1880: itkMultiResolutionPDEDeformableRegistrationTestD 1874/2822 Test #1818: itkMeanSquaresImageToImageMetricv4VectorRegistrationTest ...................... Passed 3.73 sec Start 1881: itkPathIteratorTest 1875/2822 Test #1881: itkPathIteratorTest ........................................................... Passed 0.05 sec Start 1882: itkChainCodePathTest 1876/2822 Test #1882: itkChainCodePathTest .......................................................... Passed 0.03 sec Start 1883: itkChainCodePath2DTest 1877/2822 Test #1883: itkChainCodePath2DTest ........................................................ Passed 0.03 sec Start 1884: itkHilbertPathTest 1878/2822 Test #1884: itkHilbertPathTest ............................................................ Passed 0.07 sec Start 1885: itkOrthogonallyCorrected2DParametricPathTest 1879/2822 Test #1885: itkOrthogonallyCorrected2DParametricPathTest .................................. Passed 0.04 sec Start 1886: itkPathToImageFilterTest 1880/2822 Test #1886: itkPathToImageFilterTest ...................................................... Passed 0.04 sec Start 1887: itkPathToChainCodePathFilterTest 1881/2822 Test #1887: itkPathToChainCodePathFilterTest .............................................. Passed 0.04 sec Start 1888: itkFourierSeriesPathTest 1882/2822 Test #1888: itkFourierSeriesPathTest ...................................................... Passed 0.04 sec Start 1889: itkPathFunctionsTest 1883/2822 Test #1878: itkLevelSetMotionRegistrationFilterTest ....................................... Passed 0.78 sec Start 1890: itkPolyLineParametricPathTest 1884/2822 Test #1889: itkPathFunctionsTest .......................................................... Passed 0.04 sec Start 1891: itkChainCodeToFourierSeriesPathFilterTest 1885/2822 Test #1890: itkPolyLineParametricPathTest ................................................. Passed 0.04 sec Start 1892: itkExtractOrthogonalSwath2DImageFilterTest 1886/2822 Test #1891: itkChainCodeToFourierSeriesPathFilterTest ..................................... Passed 0.04 sec Start 1893: itkOrthogonalSwath2DPathFilterTest 1887/2822 Test #1892: itkExtractOrthogonalSwath2DImageFilterTest .................................... Passed 0.09 sec Start 1894: itkParametricPathPythonTest 1888/2822 Test #1893: itkOrthogonalSwath2DPathFilterTest ............................................ Passed 0.10 sec Start 1895: itkPolyLineParametricPathPythonTest 1889/2822 Test #1880: itkMultiResolutionPDEDeformableRegistrationTestD .............................. Passed 1.18 sec Start 1896: itkImageToPathPythonTest 1890/2822 Test #1877: itkDemonsRegistrationFilterTest ............................................... Passed 1.56 sec Start 1897: itkPathToImageFilterPythonTest 1891/2822 Test #1879: itkSymmetricForcesDemonsRegistrationFilterTest ................................ Passed 2.37 sec Start 1898: itkMultivariateLegendrePolynomialTest 1892/2822 Test #1898: itkMultivariateLegendrePolynomialTest ......................................... Passed 0.05 sec Start 1899: itkQuadEdgeMeshPointTest1 1893/2822 Test #1816: itkObjectToObjectMultiMetricv4Test ............................................ Passed 7.47 sec Start 1900: itkQuadEdgeMeshTest1 1894/2822 Test #1899: itkQuadEdgeMeshPointTest1 ..................................................... Passed 0.06 sec Start 1901: itkQuadEdgeMeshTest2 1895/2822 Test #1900: itkQuadEdgeMeshTest1 .......................................................... Passed 0.03 sec Start 1902: itkQuadEdgeMeshTest3 1896/2822 Test #1901: itkQuadEdgeMeshTest2 .......................................................... Passed 0.04 sec Start 1903: itkQuadEdgeMeshPolygonCellTest 1897/2822 Test #1902: itkQuadEdgeMeshTest3 .......................................................... Passed 0.04 sec Start 1904: itkQuadEdgeMeshFrontIteratorTest 1898/2822 Test #1903: itkQuadEdgeMeshPolygonCellTest ................................................ Passed 0.04 sec Start 1905: itkQuadEdgeMeshScalarDataVTKPolyDataWriterTest1 1899/2822 Test #1904: itkQuadEdgeMeshFrontIteratorTest .............................................. Passed 0.04 sec Start 1906: itkQuadEdgeTest1 1900/2822 Test #1906: itkQuadEdgeTest1 .............................................................. Passed 0.04 sec Start 1907: itkGeometricalQuadEdgeTest1 1901/2822 Test #1905: itkQuadEdgeMeshScalarDataVTKPolyDataWriterTest1 ............................... Passed 0.06 sec Start 1908: itkQuadEdgeMeshAddFaceTest1_0 1902/2822 Test #1907: itkGeometricalQuadEdgeTest1 ................................................... Passed 0.05 sec Start 1909: itkQuadEdgeMeshAddFaceTest1_1 1903/2822 Test #1908: itkQuadEdgeMeshAddFaceTest1_0 ................................................. Passed 0.04 sec Start 1910: itkQuadEdgeMeshAddFaceTest1_2 1904/2822 Test #1909: itkQuadEdgeMeshAddFaceTest1_1 ................................................. Passed 0.05 sec Start 1911: itkQuadEdgeMeshAddFaceTest1_3 1905/2822 Test #1910: itkQuadEdgeMeshAddFaceTest1_2 ................................................. Passed 0.04 sec Start 1912: itkQuadEdgeMeshAddFaceTest1_4 1906/2822 Test #1911: itkQuadEdgeMeshAddFaceTest1_3 ................................................. Passed 0.04 sec Start 1913: itkQuadEdgeMeshAddFaceTest1_5 1907/2822 Test #1912: itkQuadEdgeMeshAddFaceTest1_4 ................................................. Passed 0.04 sec Start 1914: itkQuadEdgeMeshAddFaceTest2 1908/2822 Test #1913: itkQuadEdgeMeshAddFaceTest1_5 ................................................. Passed 0.03 sec Start 1915: itkQuadEdgeMeshCellInterfaceTest 1909/2822 Test #1914: itkQuadEdgeMeshAddFaceTest2 ................................................... Passed 0.04 sec Start 1916: itkQuadEdgeMeshCountingCellsTest 1910/2822 Test #1915: itkQuadEdgeMeshCellInterfaceTest .............................................. Passed 0.04 sec Start 1917: itkQuadEdgeMeshDeleteEdgeTest 1911/2822 Test #1916: itkQuadEdgeMeshCountingCellsTest .............................................. Passed 0.04 sec Start 1918: itkQuadEdgeMeshDeletePointAndReorderIDsTest 1912/2822 Test #1917: itkQuadEdgeMeshDeleteEdgeTest ................................................. Passed 0.04 sec Start 1919: itkQuadEdgeMeshEulerOperatorCreateCenterVertexTest 1913/2822 Test #1918: itkQuadEdgeMeshDeletePointAndReorderIDsTest ................................... Passed 0.04 sec Start 1920: itkQuadEdgeMeshEulerOperatorDeleteCenterVertexTest 1914/2822 Test #1919: itkQuadEdgeMeshEulerOperatorCreateCenterVertexTest ............................ Passed 0.04 sec Start 1921: itkQuadEdgeMeshEulerOperatorFlipTest 1915/2822 Test #1920: itkQuadEdgeMeshEulerOperatorDeleteCenterVertexTest ............................ Passed 0.05 sec Start 1922: itkQuadEdgeMeshEulerOperatorJoinFacetTest 1916/2822 Test #1921: itkQuadEdgeMeshEulerOperatorFlipTest .......................................... Passed 0.03 sec Start 1923: itkQuadEdgeMeshEulerOperatorJoinVertexTest0 1917/2822 Test #1923: itkQuadEdgeMeshEulerOperatorJoinVertexTest0 ................................... Passed 0.03 sec Start 1924: itkQuadEdgeMeshEulerOperatorJoinVertexTest1 1918/2822 Test #1922: itkQuadEdgeMeshEulerOperatorJoinFacetTest ..................................... Passed 0.05 sec Start 1925: itkQuadEdgeMeshEulerOperatorJoinVertexTest2 1919/2822 Test #1924: itkQuadEdgeMeshEulerOperatorJoinVertexTest1 ................................... Passed 0.04 sec Start 1926: itkQuadEdgeMeshEulerOperatorJoinVertexTest3 1920/2822 Test #1925: itkQuadEdgeMeshEulerOperatorJoinVertexTest2 ................................... Passed 0.04 sec Start 1927: itkQuadEdgeMeshEulerOperatorJoinVertexTest4 1921/2822 Test #1926: itkQuadEdgeMeshEulerOperatorJoinVertexTest3 ................................... Passed 0.04 sec Start 1928: itkQuadEdgeMeshEulerOperatorSplitEdgeTest 1922/2822 Test #1927: itkQuadEdgeMeshEulerOperatorJoinVertexTest4 ................................... Passed 0.04 sec Start 1929: itkQuadEdgeMeshEulerOperatorSplitVertexTest 1923/2822 Test #1928: itkQuadEdgeMeshEulerOperatorSplitEdgeTest ..................................... Passed 0.04 sec Start 1930: itkQuadEdgeMeshIteratorTest 1924/2822 Test #1929: itkQuadEdgeMeshEulerOperatorSplitVertexTest ................................... Passed 0.04 sec Start 1931: itkQuadEdgeMeshNoPointConstTest 1925/2822 Test #1931: itkQuadEdgeMeshNoPointConstTest ............................................... Passed 0.04 sec Start 1932: itkVTKPolyDataIOQuadEdgeMeshTest 1926/2822 Test #1930: itkQuadEdgeMeshIteratorTest ................................................... Passed 0.05 sec Start 1933: itkVTKPolyDataReaderQuadEdgeMeshTest 1927/2822 Test #1933: itkVTKPolyDataReaderQuadEdgeMeshTest .......................................... Passed 0.07 sec Start 1934: itkDynamicQuadEdgeMeshTest 1928/2822 Test #1932: itkVTKPolyDataIOQuadEdgeMeshTest .............................................. Passed 0.09 sec Start 1935: itkBorderQuadEdgeMeshFilterTest_0_0 1929/2822 Test #1934: itkDynamicQuadEdgeMeshTest .................................................... Passed 0.05 sec Start 1936: itkBorderQuadEdgeMeshFilterTest_0_1 1930/2822 Test #1935: itkBorderQuadEdgeMeshFilterTest_0_0 ........................................... Passed 0.12 sec Start 1937: itkBorderQuadEdgeMeshFilterTest_1_0 1931/2822 Test #1936: itkBorderQuadEdgeMeshFilterTest_0_1 ........................................... Passed 0.10 sec Start 1938: itkBorderQuadEdgeMeshFilterTest_1_1 1932/2822 Test #1937: itkBorderQuadEdgeMeshFilterTest_1_0 ........................................... Passed 0.09 sec Start 1939: itkBorderQuadEdgeMeshFilterTest2_0 1933/2822 Test #1938: itkBorderQuadEdgeMeshFilterTest_1_1 ........................................... Passed 0.09 sec Start 1940: itkBorderQuadEdgeMeshFilterTest2_1 1934/2822 Test #1939: itkBorderQuadEdgeMeshFilterTest2_0 ............................................ Passed 0.05 sec Start 1941: itkSquaredEdgeLengthDecimationQuadEdgeMeshFilterTest 1935/2822 Test #1940: itkBorderQuadEdgeMeshFilterTest2_1 ............................................ Passed 0.04 sec Start 1942: itkSmoothingQuadEdgeMeshFilterTest0 1936/2822 Test #1942: itkSmoothingQuadEdgeMeshFilterTest0 ........................................... Passed 0.12 sec Start 1943: itkSmoothingQuadEdgeMeshFilterTest1 1937/2822 Test #1941: itkSquaredEdgeLengthDecimationQuadEdgeMeshFilterTest .......................... Passed 0.22 sec Start 1944: itkDiscreteGaussianCurvatureQuadEdgeMeshFilterTest 1938/2822 Test #1944: itkDiscreteGaussianCurvatureQuadEdgeMeshFilterTest ............................ Passed 0.17 sec Start 1945: itkDiscreteMaximumCurvatureQuadEdgeMeshFilterTest 1939/2822 Test #1943: itkSmoothingQuadEdgeMeshFilterTest1 ........................................... Passed 0.33 sec Start 1946: itkDiscreteMeanCurvatureQuadEdgeMeshFilterTest 1940/2822 Test #1945: itkDiscreteMaximumCurvatureQuadEdgeMeshFilterTest ............................. Passed 0.17 sec Start 1947: itkDiscreteMinimumCurvatureQuadEdgeMeshFilterTest 1941/2822 Test #1946: itkDiscreteMeanCurvatureQuadEdgeMeshFilterTest ................................ Passed 0.17 sec Start 1948: itkDelaunayConformingQuadEdgeMeshFilterTest 1942/2822 Test #1947: itkDiscreteMinimumCurvatureQuadEdgeMeshFilterTest ............................. Passed 0.17 sec Start 1949: itkCleanQuadEdgeMeshFilterTest 1943/2822 Test #1948: itkDelaunayConformingQuadEdgeMeshFilterTest ................................... Passed 0.15 sec Start 1950: itkQuadricDecimationQuadEdgeMeshFilterTest 1944/2822 Test #1663: itkMultiLevelSetsv4MalcolmImageSubset2DTest ................................... Passed 19.34 sec Start 1951: itkQuadEdgeMeshQuadricDecimationTetrahedronTest 1945/2822 Test #1951: itkQuadEdgeMeshQuadricDecimationTetrahedronTest ............................... Passed 0.05 sec Start 1952: itkAutomaticTopologyQuadEdgeMeshSourceTest 1946/2822 Test #1895: itkPolyLineParametricPathPythonTest ........................................... Passed 3.48 sec Start 1953: itkBinaryMask3DQuadEdgeMeshSourceTest 1947/2822 Test #1952: itkAutomaticTopologyQuadEdgeMeshSourceTest .................................... Passed 0.05 sec Start 1954: itkRegularSphereQuadEdgeMeshSourceTest 1948/2822 Test #1949: itkCleanQuadEdgeMeshFilterTest ................................................ Passed 0.20 sec Start 1955: itkNormalQuadEdgeMeshFilterTest0 1949/2822 Test #1954: itkRegularSphereQuadEdgeMeshSourceTest ........................................ Passed 0.08 sec Start 1956: itkNormalQuadEdgeMeshFilterTest1 1950/2822 Test #1894: itkParametricPathPythonTest ................................................... Passed 3.68 sec Start 1957: itkNormalQuadEdgeMeshFilterTest2 1951/2822 Test #1955: itkNormalQuadEdgeMeshFilterTest0 .............................................. Passed 0.15 sec Start 1958: itkLaplacianDeformationQuadEdgeMeshFilterWithSoftConstraintsArea0Test 1952/2822 Test #1956: itkNormalQuadEdgeMeshFilterTest1 .............................................. Passed 0.15 sec Start 1959: itkLaplacianDeformationQuadEdgeMeshFilterWithHardConstraintsArea0Test 1953/2822 Test #1957: itkNormalQuadEdgeMeshFilterTest2 .............................................. Passed 0.14 sec Start 1960: itkLaplacianDeformationQuadEdgeMeshFilterWithSoftConstraintsArea1Test 1954/2822 Test #1950: itkQuadricDecimationQuadEdgeMeshFilterTest .................................... Passed 0.47 sec Start 1961: itkLaplacianDeformationQuadEdgeMeshFilterWithHardConstraintsArea1Test 1955/2822 Test #1896: itkImageToPathPythonTest ...................................................... Passed 3.80 sec Start 1962: itkParameterizationQuadEdgeMeshFilterTestb0_c0_s0 1956/2822 Test #1958: itkLaplacianDeformationQuadEdgeMeshFilterWithSoftConstraintsArea0Test ......... Passed 0.56 sec Start 1963: itkParameterizationQuadEdgeMeshFilterTestb0_c0_s1 1957/2822 Test #1959: itkLaplacianDeformationQuadEdgeMeshFilterWithHardConstraintsArea0Test ......... Passed 0.55 sec Start 1964: itkParameterizationQuadEdgeMeshFilterTestb0_c1_s0 1958/2822 Test #1960: itkLaplacianDeformationQuadEdgeMeshFilterWithSoftConstraintsArea1Test ......... Passed 0.57 sec Start 1965: itkParameterizationQuadEdgeMeshFilterTestb0_c1_s1 1959/2822 Test #1961: itkLaplacianDeformationQuadEdgeMeshFilterWithHardConstraintsArea1Test ......... Passed 0.58 sec Start 1966: itkParameterizationQuadEdgeMeshFilterTestb0_c2_s0 1960/2822 Test #1897: itkPathToImageFilterPythonTest ................................................ Passed 3.79 sec Start 1967: itkParameterizationQuadEdgeMeshFilterTestb0_c2_s1 1961/2822 Test #1962: itkParameterizationQuadEdgeMeshFilterTestb0_c0_s0 ............................. Passed 0.62 sec Start 1968: itkParameterizationQuadEdgeMeshFilterTestb0_c3_s0 1962/2822 Test #1963: itkParameterizationQuadEdgeMeshFilterTestb0_c0_s1 ............................. Passed 0.61 sec Start 1969: itkParameterizationQuadEdgeMeshFilterTestb0_c3_s1 1963/2822 Test #1965: itkParameterizationQuadEdgeMeshFilterTestb0_c1_s1 ............................. Passed 0.62 sec Start 1970: itkParameterizationQuadEdgeMeshFilterTestb0_c4_s0 1964/2822 Test #1967: itkParameterizationQuadEdgeMeshFilterTestb0_c2_s1 ............................. Passed 0.62 sec Start 1971: itkParameterizationQuadEdgeMeshFilterTestb0_c4_s1 1965/2822 Test #1964: itkParameterizationQuadEdgeMeshFilterTestb0_c1_s0 ............................. Passed 1.13 sec Start 1972: itkParameterizationQuadEdgeMeshFilterTestb1_c0_s0 1966/2822 Test #1969: itkParameterizationQuadEdgeMeshFilterTestb0_c3_s1 ............................. Passed 0.61 sec Start 1973: itkParameterizationQuadEdgeMeshFilterTestb1_c0_s1 1967/2822 Test #1971: itkParameterizationQuadEdgeMeshFilterTestb0_c4_s1 ............................. Passed 0.59 sec Start 1974: itkParameterizationQuadEdgeMeshFilterTestb1_c1_s0 1968/2822 Test #1953: itkBinaryMask3DQuadEdgeMeshSourceTest ......................................... Passed 2.31 sec Start 1975: itkParameterizationQuadEdgeMeshFilterTestb1_c1_s1 1969/2822 Test #1972: itkParameterizationQuadEdgeMeshFilterTestb1_c0_s0 ............................. Passed 0.63 sec Start 1976: itkParameterizationQuadEdgeMeshFilterTestb1_c2_s0 1970/2822 Test #1973: itkParameterizationQuadEdgeMeshFilterTestb1_c0_s1 ............................. Passed 0.61 sec Start 1977: itkParameterizationQuadEdgeMeshFilterTestb1_c2_s1 1971/2822 Test #1966: itkParameterizationQuadEdgeMeshFilterTestb0_c2_s0 ............................. Passed 1.68 sec Start 1978: itkParameterizationQuadEdgeMeshFilterTestb1_c3_s0 1972/2822 Test #1975: itkParameterizationQuadEdgeMeshFilterTestb1_c1_s1 ............................. Passed 0.63 sec Start 1979: itkParameterizationQuadEdgeMeshFilterTestb1_c3_s1 1973/2822 Test #1977: itkParameterizationQuadEdgeMeshFilterTestb1_c2_s1 ............................. Passed 0.61 sec Start 1980: itkParameterizationQuadEdgeMeshFilterTestb1_c4_s0 1974/2822 Test #1970: itkParameterizationQuadEdgeMeshFilterTestb0_c4_s0 ............................. Passed 1.71 sec Start 1981: itkParameterizationQuadEdgeMeshFilterTestb1_c4_s1 1975/2822 Test #1974: itkParameterizationQuadEdgeMeshFilterTestb1_c1_s0 ............................. Passed 1.19 sec Start 1982: itkNeighborhoodConnectedImageFilterTest 1976/2822 Test #1982: itkNeighborhoodConnectedImageFilterTest ....................................... Passed 0.11 sec Start 1983: itkIsolatedConnectedImageFilterTest 1977/2822 Test #1983: itkIsolatedConnectedImageFilterTest ........................................... Passed 0.07 sec Start 1984: itkIsolatedConnectedImageFilterTest2 1978/2822 Test #1979: itkParameterizationQuadEdgeMeshFilterTestb1_c3_s1 ............................. Passed 0.62 sec Start 1985: itkConfidenceConnectedImageFilterTest 1979/2822 Test #1984: itkIsolatedConnectedImageFilterTest2 .......................................... Passed 0.07 sec Start 1986: itkConfidenceConnectedImageFilterTest2 1980/2822 Test #1985: itkConfidenceConnectedImageFilterTest ......................................... Passed 0.05 sec Start 1987: itkVectorConfidenceConnectedImageFilterTest 1981/2822 Test #1986: itkConfidenceConnectedImageFilterTest2 ........................................ Passed 0.06 sec Start 1988: itkVectorConfidenceConnectedImageFilterTest2 1982/2822 Test #1987: itkVectorConfidenceConnectedImageFilterTest ................................... Passed 0.05 sec Start 1989: itkConnectedThresholdImageFilterTest 1983/2822 Test #1988: itkVectorConfidenceConnectedImageFilterTest2 .................................. Passed 0.05 sec Start 1990: itkConnectedThresholdImageFilterTest2 1984/2822 Test #1989: itkConnectedThresholdImageFilterTest .......................................... Passed 0.05 sec Start 1991: itkBSplineTransformParametersAdaptorTest 1985/2822 Test #1990: itkConnectedThresholdImageFilterTest2 ......................................... Passed 0.05 sec Start 1992: itkDisplacementFieldTransformParametersAdaptorTest 1986/2822 Test #1991: itkBSplineTransformParametersAdaptorTest ...................................... Passed 0.11 sec Start 1993: itkBSplineSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest 1987/2822 Test #1981: itkParameterizationQuadEdgeMeshFilterTestb1_c4_s1 ............................. Passed 0.64 sec Start 1994: itkGaussianSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest 1988/2822 Test #1992: itkDisplacementFieldTransformParametersAdaptorTest ............................ Passed 0.21 sec Start 1995: itkBSplineExponentialDiffeomorphicTransformParametersAdaptorTest 1989/2822 Test #1994: itkGaussianSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest ... Passed 0.22 sec Start 1996: itkGaussianExponentialDiffeomorphicTransformParametersAdaptorTest 1990/2822 Test #1968: itkParameterizationQuadEdgeMeshFilterTestb0_c3_s0 ............................. Passed 2.86 sec Start 1997: itkCenteredTransformInitializerTest 1991/2822 Test #1993: itkBSplineSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest .... Passed 0.28 sec Start 1998: itkCenteredVersorTransformInitializerTest 1992/2822 Test #1997: itkCenteredTransformInitializerTest ........................................... Passed 0.14 sec Start 1999: itkMultiResolutionImageRegistrationMethodTest_1 1993/2822 Test #1976: itkParameterizationQuadEdgeMeshFilterTestb1_c2_s0 ............................. Passed 1.70 sec Start 2000: itkMultiResolutionImageRegistrationMethodTest_2 1994/2822 Test #1998: itkCenteredVersorTransformInitializerTest ..................................... Passed 0.28 sec Start 2001: itkImageRegistrationMethodTest_10 1995/2822 Test #2001: itkImageRegistrationMethodTest_10 ............................................. Passed 0.20 sec Start 2002: itkImageRegistrationMethodTest_11 1996/2822 Test #2002: itkImageRegistrationMethodTest_11 ............................................. Passed 0.06 sec Start 2003: itkImageRegistrationMethodTest_12 1997/2822 Test #2003: itkImageRegistrationMethodTest_12 ............................................. Passed 0.11 sec Start 2004: itkImageRegistrationMethodTest_13 1998/2822 Test #1980: itkParameterizationQuadEdgeMeshFilterTestb1_c4_s0 ............................. Passed 1.63 sec Start 2005: itkImageRegistrationMethodTest_14 1999/2822 Test #1978: itkParameterizationQuadEdgeMeshFilterTestb1_c3_s0 ............................. Passed 3.20 sec Start 2006: itkImageRegistrationMethodTest_15 2000/2822 Test #2000: itkMultiResolutionImageRegistrationMethodTest_2 ............................... Passed 1.70 sec Start 2007: itkImageRegistrationMethodTest_16 2001/2822 Test #2005: itkImageRegistrationMethodTest_14 ............................................. Passed 1.18 sec Start 2008: itkMeanSquaresPointSetToImageMetricTest 2002/2822 Test #2008: itkMeanSquaresPointSetToImageMetricTest ....................................... Passed 0.13 sec Start 2009: itkGradientDifferenceImageToImageMetricTest 2003/2822 Test #1174: itkGradientVectorFlowImageFilterPythonTest .................................... Passed 39.97 sec Start 2010: itkHistogramImageToImageMetricTest 2004/2822 Test #2006: itkImageRegistrationMethodTest_15 ............................................. Passed 1.36 sec Start 2011: itkMutualInformationHistogramImageToImageMetricTest 2005/2822 Test #2011: itkMutualInformationHistogramImageToImageMetricTest ........................... Passed 0.13 sec Start 2012: itkMeanReciprocalSquareDifferencePointSetToImageMetricTest 2006/2822 Test #2012: itkMeanReciprocalSquareDifferencePointSetToImageMetricTest .................... Passed 0.12 sec Start 2013: itkMultiResolutionImageRegistrationMethodTest 2007/2822 Test #1999: itkMultiResolutionImageRegistrationMethodTest_1 ............................... Passed 3.30 sec Start 2014: itkCompareHistogramImageToImageMetricTest 2008/2822 Test #2009: itkGradientDifferenceImageToImageMetricTest ................................... Passed 1.45 sec Start 2015: itkMeanSquaresHistogramImageToImageMetricTest 2009/2822 Test #2014: itkCompareHistogramImageToImageMetricTest ..................................... Passed 0.09 sec Start 2016: itkImageRegistrationMethodTest 2010/2822 Test #2010: itkHistogramImageToImageMetricTest ............................................ Passed 0.58 sec Start 2017: itkCorrelationCoefficientHistogramImageToImageMetricTest 2011/2822 Test #2016: itkImageRegistrationMethodTest ................................................ Passed 0.11 sec Start 2018: itkNormalizedCorrelationPointSetToImageMetricTest 2012/2822 Test #2013: itkMultiResolutionImageRegistrationMethodTest ................................. Passed 0.34 sec Start 2019: itkKullbackLeiblerCompareHistogramImageToImageMetricTest 2013/2822 Test #2015: itkMeanSquaresHistogramImageToImageMetricTest ................................. Passed 0.19 sec Start 2020: itkNormalizedMutualInformationHistogramImageToImageMetricTest 2014/2822 Test #2017: itkCorrelationCoefficientHistogramImageToImageMetricTest ...................... Passed 0.17 sec Start 2021: itkPointSetToSpatialObjectDemonsRegistrationTest 2015/2822 Test #2021: itkPointSetToSpatialObjectDemonsRegistrationTest .............................. Passed 0.05 sec Start 2022: itkPointSetToImageRegistrationTest 2016/2822 Test #2018: itkNormalizedCorrelationPointSetToImageMetricTest ............................. Passed 0.16 sec Start 2023: itkPointsLocatorTest 2017/2822 Test #2020: itkNormalizedMutualInformationHistogramImageToImageMetricTest ................. Passed 0.16 sec Start 2024: itkKappaStatisticImageToImageMetricTest 2018/2822 Test #2022: itkPointSetToImageRegistrationTest ............................................ Passed 0.14 sec Start 2025: itkMattesMutualInformationImageToImageMetricTest 2019/2822 Test #2023: itkPointsLocatorTest .......................................................... Passed 0.14 sec Start 2026: itkMattesMutualInformationImageToImageMetricTest2 2020/2822 Test #2024: itkKappaStatisticImageToImageMetricTest ....................................... Passed 0.14 sec Start 2027: itkMattesMutualInformationImageToImageMetricTest3 2021/2822 Test #1995: itkBSplineExponentialDiffeomorphicTransformParametersAdaptorTest .............. Passed 4.14 sec Start 2028: itkMattesMutualInformationImageToImageMetricTest4 2022/2822 Test #1996: itkGaussianExponentialDiffeomorphicTransformParametersAdaptorTest ............. Passed 4.02 sec Start 2029: itkMatchCardinalityImageToImageMetricTest 2023/2822 Test #2029: itkMatchCardinalityImageToImageMetricTest ..................................... Passed 0.10 sec Start 2030: itkMultiResolutionPyramidImageFilterWithResampleFilterTest 2024/2822 Test #2004: itkImageRegistrationMethodTest_13 ............................................. Passed 3.83 sec Start 2031: itkMultiResolutionPyramidImageFilterWithShrinkFilterTest 2025/2822 Test #2030: itkMultiResolutionPyramidImageFilterWithResampleFilterTest .................... Passed 0.94 sec Start 2032: itkRecursiveMultiResolutionPyramidImageFilterWithResampleFilterTest2 2026/2822 Test #2031: itkMultiResolutionPyramidImageFilterWithShrinkFilterTest ...................... Passed 0.96 sec Start 2033: itkRecursiveMultiResolutionPyramidImageFilterWithShrinkFilterTest2 2027/2822 Test #2032: itkRecursiveMultiResolutionPyramidImageFilterWithResampleFilterTest2 .......... Passed 0.54 sec Start 2034: itkImageRegistrationMethodTest_1 2028/2822 Test #2034: itkImageRegistrationMethodTest_1 .............................................. Passed 0.29 sec Start 2035: itkImageRegistrationMethodTest_2 2029/2822 Test #2035: itkImageRegistrationMethodTest_2 .............................................. Passed 0.09 sec Start 2036: itkImageRegistrationMethodTest_3 2030/2822 Test #2033: itkRecursiveMultiResolutionPyramidImageFilterWithShrinkFilterTest2 ............ Passed 0.59 sec Start 2037: itkImageRegistrationMethodTest_4 2031/2822 Test #2019: itkKullbackLeiblerCompareHistogramImageToImageMetricTest ...................... Passed 2.39 sec Start 2038: itkImageRegistrationMethodTest_5 2032/2822 Test #2037: itkImageRegistrationMethodTest_4 .............................................. Passed 0.08 sec Start 2039: itkImageRegistrationMethodTest_6 2033/2822 Test #2036: itkImageRegistrationMethodTest_3 .............................................. Passed 0.15 sec Start 2040: itkImageRegistrationMethodTest_7 2034/2822 Test #2039: itkImageRegistrationMethodTest_6 .............................................. Passed 0.10 sec Start 2041: itkImageRegistrationMethodTest_8 2035/2822 Test #2038: itkImageRegistrationMethodTest_5 .............................................. Passed 0.17 sec Start 2042: itkImageRegistrationMethodTest_9 2036/2822 Test #2040: itkImageRegistrationMethodTest_7 .............................................. Passed 0.10 sec Start 2043: itkRecursiveMultiResolutionPyramidImageFilterWithResampleFilterTest 2037/2822 Test #2007: itkImageRegistrationMethodTest_16 ............................................. Passed 4.42 sec Start 2044: itkRecursiveMultiResolutionPyramidImageFilterWithShrinkFilterTest 2038/2822 Test #2041: itkImageRegistrationMethodTest_8 .............................................. Passed 0.09 sec Start 2045: itkNormalizedCorrelationImageMetricTest 2039/2822 Test #2042: itkImageRegistrationMethodTest_9 .............................................. Passed 0.10 sec Start 2046: itkMeanReciprocalSquareDifferenceImageMetricTest 2040/2822 Test #2046: itkMeanReciprocalSquareDifferenceImageMetricTest .............................. Passed 0.30 sec Start 2047: itkMeanSquaresImageMetricTest 2041/2822 Test #2025: itkMattesMutualInformationImageToImageMetricTest .............................. Passed 2.70 sec Start 2048: itkMutualInformationMetricTest 2042/2822 Test #2026: itkMattesMutualInformationImageToImageMetricTest2 ............................. Passed 2.71 sec Start 2049: itkPointSetToPointSetRegistrationTest 2043/2822 Test #2044: itkRecursiveMultiResolutionPyramidImageFilterWithShrinkFilterTest ............. Passed 0.42 sec Start 2050: itkImageToSpatialObjectRegistrationTest 2044/2822 Test #2043: itkRecursiveMultiResolutionPyramidImageFilterWithResampleFilterTest ........... Passed 0.44 sec Start 2051: itkLandmarkBasedTransformInitializerTest 2045/2822 Test #2051: itkLandmarkBasedTransformInitializerTest ...................................... Passed 0.10 sec Start 2052: itkBlockMatchingImageFilterTest 2046/2822 Test #2045: itkNormalizedCorrelationImageMetricTest ....................................... Passed 0.47 sec Start 2053: itkImageRegistrationMethodTest_17 2047/2822 Test #2050: itkImageToSpatialObjectRegistrationTest ....................................... Passed 0.13 sec Start 2054: itkEuclideanDistancePointMetricTest 2048/2822 Test #2054: itkEuclideanDistancePointMetricTest ........................................... Passed 0.05 sec Start 2055: ITKRegistrationMethodsv4InDoxygenGroup 2049/2822 Test #2048: itkMutualInformationMetricTest ................................................ Passed 0.24 sec Start 2056: itkImageRegistrationSamplingTest 2050/2822 Test #2055: ITKRegistrationMethodsv4InDoxygenGroup ........................................ Passed 0.02 sec Start 2057: itkSimpleImageRegistrationTestDouble 2051/2822 Test #2049: itkPointSetToPointSetRegistrationTest ......................................... Passed 0.23 sec Start 2058: itkSimpleImageRegistrationTestFloat 2052/2822 Test #2056: itkImageRegistrationSamplingTest .............................................. Passed 0.10 sec Start 2059: itkSimpleImageRegistrationTestWithMaskAndSamplingDouble 2053/2822 Test #2052: itkBlockMatchingImageFilterTest ............................................... Passed 0.40 sec Start 2060: itkSimpleImageRegistrationTestWithMaskAndSamplingFloat 2054/2822 Test #2047: itkMeanSquaresImageMetricTest ................................................. Passed 0.70 sec Start 2061: itkSimpleImageRegistrationTest2 2055/2822 Test #2053: itkImageRegistrationMethodTest_17 ............................................. Passed 0.65 sec Start 2062: itkSimpleImageRegistrationTest3 2056/2822 Test #2027: itkMattesMutualInformationImageToImageMetricTest3 ............................. Passed 3.59 sec Start 2063: itkSimpleImageRegistrationTest4 2057/2822 Test #2061: itkSimpleImageRegistrationTest2 ............................................... Passed 0.37 sec Start 2064: itkSimplePointSetRegistrationTest 2058/2822 Test #2028: itkMattesMutualInformationImageToImageMetricTest4 ............................. Passed 3.71 sec Start 2065: itkSyNPointSetRegistrationTest 2059/2822 Test #2062: itkSimpleImageRegistrationTest3 ............................................... Passed 0.28 sec Start 2066: itkBSplineSyNPointSetRegistrationTest 2060/2822 Test #2064: itkSimplePointSetRegistrationTest ............................................. Passed 0.07 sec Start 2067: itkTimeVaryingBSplineVelocityFieldPointSetRegistrationTest 2061/2822 Test #2057: itkSimpleImageRegistrationTestDouble .......................................... Passed 1.04 sec Start 2068: itkExponentialImageRegistrationTest 2062/2822 Test #2058: itkSimpleImageRegistrationTestFloat ........................................... Passed 1.18 sec Start 2069: itkBSplineExponentialImageRegistrationTest 2063/2822 Test #2059: itkSimpleImageRegistrationTestWithMaskAndSamplingDouble ....................... Passed 1.11 sec Start 2070: itkTimeVaryingVelocityFieldImageRegistrationTest 2064/2822 Test #2060: itkSimpleImageRegistrationTestWithMaskAndSamplingFloat ........................ Passed 1.11 sec Start 2071: itkTimeVaryingBSplineVelocityFieldImageRegistrationTest 2065/2822 Test #2068: itkExponentialImageRegistrationTest ........................................... Passed 0.94 sec Start 2072: itkSyNImageRegistrationTest 2066/2822 Test #2069: itkBSplineExponentialImageRegistrationTest .................................... Passed 1.46 sec Start 2073: itkBSplineSyNImageRegistrationTest 2067/2822 Test #2066: itkBSplineSyNPointSetRegistrationTest ......................................... Passed 2.22 sec Start 2074: itkQuasiNewtonOptimizerv4RegistrationTest1 2068/2822 Test #2072: itkSyNImageRegistrationTest ................................................... Passed 2.60 sec Start 2075: itkQuasiNewtonOptimizerv4RegistrationTest2 2069/2822 Test #2074: itkQuasiNewtonOptimizerv4RegistrationTest1 .................................... Passed 1.75 sec Start 2076: itkQuasiNewtonOptimizerv4RegistrationTest3 2070/2822 Test #2063: itkSimpleImageRegistrationTest4 ............................................... Passed 4.53 sec Start 2077: itkBSplineImageRegistrationTest 2071/2822 Test #2073: itkBSplineSyNImageRegistrationTest ............................................ Passed 2.66 sec Start 2078: ITKReviewInDoxygenGroup 2072/2822 Test #2078: ITKReviewInDoxygenGroup ....................................................... Passed 0.05 sec Start 2079: itkAreaClosingImageFilterTest0 2073/2822 Test #2079: itkAreaClosingImageFilterTest0 ................................................ Passed 0.19 sec Start 2080: itkAreaOpeningImageFilterTest0 2074/2822 Test #2080: itkAreaOpeningImageFilterTest0 ................................................ Passed 0.16 sec Start 2081: itkBruker2DSEQImageIOTest1 2075/2822 Test #2081: itkBruker2DSEQImageIOTest1 .................................................... Passed 0.09 sec Start 2082: itkConformalFlatteningMeshFilterTest1 2076/2822 Test #2082: itkConformalFlatteningMeshFilterTest1 ......................................... Passed 0.18 sec Start 2083: itkConformalFlatteningMeshFilterTest2 2077/2822 Test #2083: itkConformalFlatteningMeshFilterTest2 ......................................... Passed 0.12 sec Start 2084: itkConformalFlatteningQuadEdgeMeshFilterTest1 2078/2822 Test #2084: itkConformalFlatteningQuadEdgeMeshFilterTest1 ................................. Passed 0.23 sec Start 2085: itkConformalFlatteningQuadEdgeMeshFilterTest2 2079/2822 Test #2075: itkQuasiNewtonOptimizerv4RegistrationTest2 .................................... Passed 1.89 sec Start 2086: itkContourExtractor2DImageFilterTest 2080/2822 Test #2085: itkConformalFlatteningQuadEdgeMeshFilterTest2 ................................. Passed 0.16 sec Start 2087: itkDiffeomorphicDemonsRegistrationFilterTest01 2081/2822 Test #2086: itkContourExtractor2DImageFilterTest .......................................... Passed 0.08 sec Start 2088: itkDiffeomorphicDemonsRegistrationFilterTest02 2082/2822 Test #2076: itkQuasiNewtonOptimizerv4RegistrationTest3 .................................... Passed 2.12 sec Start 2089: itkDiffeomorphicDemonsRegistrationFilterTest03 2083/2822 Test #2065: itkSyNPointSetRegistrationTest ................................................ Passed 7.90 sec Start 2090: itkDiffeomorphicDemonsRegistrationFilterTest04 2084/2822 Test #2071: itkTimeVaryingBSplineVelocityFieldImageRegistrationTest ....................... Passed 8.44 sec Start 2091: itkDiffeomorphicDemonsRegistrationFilterTest05 2085/2822 Test #2070: itkTimeVaryingVelocityFieldImageRegistrationTest .............................. Passed 15.14 sec Start 2092: itkDiffeomorphicDemonsRegistrationFilterTest06 2086/2822 Test #2067: itkTimeVaryingBSplineVelocityFieldPointSetRegistrationTest .................... Passed 16.50 sec Start 2093: itkDiffeomorphicDemonsRegistrationFilterTest07 2087/2822 Test #2091: itkDiffeomorphicDemonsRegistrationFilterTest05 ................................ Passed 8.10 sec Start 2094: itkDiffeomorphicDemonsRegistrationFilterTest08 2088/2822 Test #2090: itkDiffeomorphicDemonsRegistrationFilterTest04 ................................ Passed 9.37 sec Start 2095: itkDiffeomorphicDemonsRegistrationFilterTest09 2089/2822 Test #2089: itkDiffeomorphicDemonsRegistrationFilterTest03 ................................ Passed 11.47 sec Start 2096: itkDiffeomorphicDemonsRegistrationFilterTest10 2090/2822 Test #2087: itkDiffeomorphicDemonsRegistrationFilterTest01 ................................ Passed 12.21 sec Start 2097: itkDiffeomorphicDemonsRegistrationFilterTest11 2091/2822 Test #2094: itkDiffeomorphicDemonsRegistrationFilterTest08 ................................ Passed 2.93 sec Start 2098: itkDirectFourierReconstructionImageToImageFilterTest 2092/2822 Test #2088: itkDiffeomorphicDemonsRegistrationFilterTest02 ................................ Passed 14.53 sec Start 2099: itkDiscreteGaussianDerivativeImageFilterScaleSpaceTest 2093/2822 Test #2099: itkDiscreteGaussianDerivativeImageFilterScaleSpaceTest ........................ Passed 0.07 sec Start 2100: itkDiscreteGaussianDerivativeImageFilterTest01 2094/2822 Test #2100: itkDiscreteGaussianDerivativeImageFilterTest01 ................................ Passed 0.07 sec Start 2101: itkDiscreteGaussianDerivativeImageFilterTest10 2095/2822 Test #2101: itkDiscreteGaussianDerivativeImageFilterTest10 ................................ Passed 0.07 sec Start 2102: itkDiscreteGaussianDerivativeImageFilterTest11 2096/2822 Test #2098: itkDirectFourierReconstructionImageToImageFilterTest .......................... Passed 0.41 sec Start 2103: itkDiscreteGaussianDerivativeImageFilterTest20 2097/2822 Test #2102: itkDiscreteGaussianDerivativeImageFilterTest11 ................................ Passed 0.06 sec Start 2104: itkDiscreteGaussianDerivativeImageFilterTest02 2098/2822 Test #2103: itkDiscreteGaussianDerivativeImageFilterTest20 ................................ Passed 0.06 sec Start 2105: itkDiscreteGaussianDerivativeImageFilterTest21 2099/2822 Test #2105: itkDiscreteGaussianDerivativeImageFilterTest21 ................................ Passed 0.06 sec Start 2106: itkDiscreteGaussianDerivativeImageFilterTest12 2100/2822 Test #2104: itkDiscreteGaussianDerivativeImageFilterTest02 ................................ Passed 0.07 sec Start 2107: itkDiscreteGaussianDerivativeImageFilterTest30 2101/2822 Test #2106: itkDiscreteGaussianDerivativeImageFilterTest12 ................................ Passed 0.07 sec Start 2108: itkDiscreteGaussianDerivativeImageFilterTest03 2102/2822 Test #2107: itkDiscreteGaussianDerivativeImageFilterTest30 ................................ Passed 0.06 sec Start 2109: itkDiscreteGaussianDerivativeImageFunctionTest01 2103/2822 Test #2108: itkDiscreteGaussianDerivativeImageFilterTest03 ................................ Passed 0.06 sec Start 2110: itkDiscreteGaussianDerivativeImageFunctionTest02 2104/2822 Test #2110: itkDiscreteGaussianDerivativeImageFunctionTest02 .............................. Passed 0.18 sec Start 2111: itkDiscreteGradientMagnitudeGaussianImageFunctionTest01 2105/2822 Test #2109: itkDiscreteGaussianDerivativeImageFunctionTest01 .............................. Passed 0.33 sec Start 2112: itkDiscreteGradientMagnitudeGaussianImageFunctionTest02 2106/2822 Test #2095: itkDiffeomorphicDemonsRegistrationFilterTest09 ................................ Passed 3.73 sec Start 2113: itkDiscreteGradientMagnitudeGaussianImageFunctionTestUseImageSpacingOff 2107/2822 Test #2113: itkDiscreteGradientMagnitudeGaussianImageFunctionTestUseImageSpacingOff ....... Passed 0.28 sec Start 2114: itkDiscreteHessianGaussianImageFunctionTest 2108/2822 Test #2112: itkDiscreteGradientMagnitudeGaussianImageFunctionTest02 ....................... Passed 0.33 sec Start 2115: itkFastApproximateRankImageFilterTest3 2109/2822 Test #2115: itkFastApproximateRankImageFilterTest3 ........................................ Passed 0.09 sec Start 2116: itkFastApproximateRankImageFilterTest10 2110/2822 Test #2116: itkFastApproximateRankImageFilterTest10 ....................................... Passed 0.08 sec Start 2117: itkFastSymmetricForcesDemonsRegistrationFilterTest 2111/2822 Test #2111: itkDiscreteGradientMagnitudeGaussianImageFunctionTest01 ....................... Passed 0.62 sec Start 2118: itkGridForwardWarpImageFilterTest 2112/2822 Test #2118: itkGridForwardWarpImageFilterTest ............................................. Passed 0.04 sec Start 2119: itkImageFunctionTest 2113/2822 Test #2119: itkImageFunctionTest .......................................................... Passed 0.05 sec Start 2121: itkJPEG2000Test01 2114/2822 Test #2096: itkDiffeomorphicDemonsRegistrationFilterTest10 ................................ Passed 4.11 sec Start 2122: itkJPEG2000Test02 2115/2822 Test #2121: itkJPEG2000Test01 ............................................................. Passed 0.21 sec Start 2123: itkJPEG2000Test03 2116/2822 Test #2122: itkJPEG2000Test02 ............................................................. Passed 0.18 sec Start 2124: itkJPEG2000Test05 2117/2822 Test #2123: itkJPEG2000Test03 ............................................................. Passed 0.06 sec Start 2125: itkJPEG2000Test06 2118/2822 Test #2125: itkJPEG2000Test06 ............................................................. Passed 0.06 sec Start 2126: itkLabelGeometryImageFilterTest 2119/2822 Test #2124: itkJPEG2000Test05 ............................................................. Passed 0.11 sec Start 2127: itkLabelGeometryImageFilterTest3D 2120/2822 Test #2126: itkLabelGeometryImageFilterTest ............................................... Passed 0.07 sec Start 2128: itkMapMaskedRankImageFilterTest3 2121/2822 Test #2092: itkDiffeomorphicDemonsRegistrationFilterTest06 ................................ Passed 6.56 sec Start 2129: itkMapMaskedRankImageFilterTest10 2122/2822 Test #2128: itkMapMaskedRankImageFilterTest3 .............................................. Passed 0.09 sec Start 2130: itkMapRankImageFilterTest3 2123/2822 Test #2127: itkLabelGeometryImageFilterTest3D ............................................. Passed 0.15 sec Start 2131: itkMapRankImageFilterTest10 2124/2822 Test #2129: itkMapMaskedRankImageFilterTest10 ............................................. Passed 0.08 sec Start 2132: itkMaskedRankImageFilterTest3 2125/2822 Test #2130: itkMapRankImageFilterTest3 .................................................... Passed 0.11 sec Start 2133: itkMaskedRankImageFilterTest10 2126/2822 Test #2132: itkMaskedRankImageFilterTest3 ................................................. Passed 0.07 sec Start 2134: itkMultiphaseDenseFiniteDifferenceImageFilterTest 2127/2822 Test #2131: itkMapRankImageFilterTest10 ................................................... Passed 0.13 sec Start 2135: itkMultiphaseFiniteDifferenceImageFilterTest 2128/2822 Test #2134: itkMultiphaseDenseFiniteDifferenceImageFilterTest ............................. Passed 0.03 sec Start 2136: itkMultiphaseSparseFiniteDifferenceImageFilterTest 2129/2822 Test #2135: itkMultiphaseFiniteDifferenceImageFilterTest .................................. Passed 0.04 sec Start 2137: itkMultiScaleHessianBasedMeasureImageFilterTest 2130/2822 Test #2133: itkMaskedRankImageFilterTest10 ................................................ Passed 0.08 sec Start 2138: itkNeuralNetworkIOTest 2131/2822 Test #2136: itkMultiphaseSparseFiniteDifferenceImageFilterTest ............................ Passed 0.04 sec Start 2139: itkOptImageToImageMetricsTest01 2132/2822 Test #2138: itkNeuralNetworkIOTest ........................................................ Passed 0.06 sec Start 2140: itkOptImageToImageMetricsTest02 2133/2822 Test #2137: itkMultiScaleHessianBasedMeasureImageFilterTest ............................... Passed 0.45 sec Start 2141: itkOptImageToImageMetricsTest03 2134/2822 Test #2117: itkFastSymmetricForcesDemonsRegistrationFilterTest ............................ Passed 1.75 sec Start 2142: itkOptImageToImageMetricsTest04 2135/2822 Test #2142: itkOptImageToImageMetricsTest04 ............................................... Passed 0.11 sec Start 2143: itkOptMattesImageToImageMetricsTest01 2136/2822 Test #2143: itkOptMattesImageToImageMetricsTest01 ......................................... Passed 0.08 sec Start 2144: itkRankImageFilterTest3 2137/2822 Test #2144: itkRankImageFilterTest3 ....................................................... Passed 0.06 sec Start 2145: itkRankImageFilterTest10 2138/2822 Test #2145: itkRankImageFilterTest10 ...................................................... Passed 0.08 sec Start 2146: itkRegionBasedLevelSetFunctionTest 2139/2822 Test #2146: itkRegionBasedLevelSetFunctionTest ............................................ Passed 0.04 sec Start 2147: itkRobustAutomaticThresholdImageFilterTest 2140/2822 Test #2147: itkRobustAutomaticThresholdImageFilterTest .................................... Passed 0.06 sec Start 2148: itkRobustAutomaticThresholdCalculatorTest 2141/2822 Test #2148: itkRobustAutomaticThresholdCalculatorTest ..................................... Passed 0.07 sec Start 2149: itkScalarChanAndVeseDenseLevelSetImageFilterTest1 2142/2822 Test #2149: itkScalarChanAndVeseDenseLevelSetImageFilterTest1 ............................. Passed 0.04 sec Start 2150: itkScalarChanAndVeseDenseLevelSetImageFilterTest2_0 2143/2822 Test #2093: itkDiffeomorphicDemonsRegistrationFilterTest07 ................................ Passed 7.37 sec Start 2151: itkScalarChanAndVeseDenseLevelSetImageFilterTest2_1 2144/2822 Test #2151: itkScalarChanAndVeseDenseLevelSetImageFilterTest2_1 ........................... Passed 0.11 sec Start 2152: itkScalarChanAndVeseDenseLevelSetImageFilterTest2_2 2145/2822 Test #2140: itkOptImageToImageMetricsTest02 ............................................... Passed 2.55 sec Start 2153: itkScalarChanAndVeseDenseLevelSetImageFilterTest2_3 2146/2822 Test #2139: itkOptImageToImageMetricsTest01 ............................................... Passed 2.78 sec Start 2154: itkScalarChanAndVeseDenseLevelSetImageFilterTest3 2147/2822 Test #2154: itkScalarChanAndVeseDenseLevelSetImageFilterTest3 ............................. Passed 0.04 sec Start 2155: itkScalarChanAndVeseDenseLevelSetImageFilterTest4 2148/2822 Test #2141: itkOptImageToImageMetricsTest03 ............................................... Passed 2.80 sec Start 2156: itkScalarChanAndVeseLevelSetFunctionTest1 2149/2822 Test #2156: itkScalarChanAndVeseLevelSetFunctionTest1 ..................................... Passed 0.05 sec Start 2157: itkScalarChanAndVeseLevelSetFunctionTest2 2150/2822 Test #2157: itkScalarChanAndVeseLevelSetFunctionTest2 ..................................... Passed 0.04 sec Start 2158: itkScalarChanAndVeseSparseLevelSetImageFilterTest1 2151/2822 Test #2158: itkScalarChanAndVeseSparseLevelSetImageFilterTest1 ............................ Passed 0.05 sec Start 2159: itkScalarChanAndVeseSparseLevelSetImageFilterTest2 2152/2822 Test #2159: itkScalarChanAndVeseSparseLevelSetImageFilterTest2 ............................ Passed 0.14 sec Start 2160: itkScalarRegionBasedLevelSetFunctionTest 2153/2822 Test #2160: itkScalarRegionBasedLevelSetFunctionTest ...................................... Passed 0.04 sec Start 2161: itkShapedFloodFilledImageFunctionConditionalConstIteratorTest1 2154/2822 Test #2161: itkShapedFloodFilledImageFunctionConditionalConstIteratorTest1 ................ Passed 0.04 sec Start 2162: itkShapedFloodFilledImageFunctionConditionalConstIteratorTest2 2155/2822 Test #2162: itkShapedFloodFilledImageFunctionConditionalConstIteratorTest2 ................ Passed 0.04 sec Start 2163: itkShapedFloodFilledImageFunctionConditionalConstIteratorTest3 2156/2822 Test #2097: itkDiffeomorphicDemonsRegistrationFilterTest11 ................................ Passed 8.15 sec Start 2164: itkStochasticFractalDimensionImageFilterTest1 2157/2822 Test #2163: itkShapedFloodFilledImageFunctionConditionalConstIteratorTest3 ................ Passed 0.40 sec Start 2165: itkStochasticFractalDimensionImageFilterTest2 2158/2822 Test #2164: itkStochasticFractalDimensionImageFilterTest1 ................................. Passed 2.60 sec Start 2166: itkTimeAndMemoryProbeTest1 2159/2822 Test #2166: itkTimeAndMemoryProbeTest1 .................................................... Passed 0.05 sec Start 2167: itkVectorCentralDifferenceImageFunctionTest 2160/2822 Test #2167: itkVectorCentralDifferenceImageFunctionTest ................................... Passed 0.04 sec Start 2168: itkVoxBoCUBImageIOTest1 2161/2822 Test #2168: itkVoxBoCUBImageIOTest1 ....................................................... Passed 0.05 sec Start 2169: itkVoxBoCUBImageIOTest2 2162/2822 Test #2169: itkVoxBoCUBImageIOTest2 ....................................................... Passed 0.05 sec Start 2170: itkVoxBoCUBImageIOTest3 2163/2822 Test #2165: itkStochasticFractalDimensionImageFilterTest2 ................................. Passed 2.51 sec Start 2171: itkVoxBoCUBImageIOTest4 2164/2822 Test #2170: itkVoxBoCUBImageIOTest3 ....................................................... Passed 0.07 sec Start 2172: itkVoxBoCUBImageIOTest5 2165/2822 Test #2172: itkVoxBoCUBImageIOTest5 ....................................................... Passed 0.05 sec Start 2173: itkVoxBoCUBImageIOTest6 2166/2822 Test #2171: itkVoxBoCUBImageIOTest4 ....................................................... Passed 0.08 sec Start 2174: itkVoxBoCUBImageIOTest7 2167/2822 Test #2173: itkVoxBoCUBImageIOTest6 ....................................................... Passed 0.07 sec Start 2175: itkWarpHarmonicEnergyCalculatorTest 2168/2822 Test #2174: itkVoxBoCUBImageIOTest7 ....................................................... Passed 0.07 sec Start 2176: itkSphereSignedDistanceFunctionTest 2169/2822 Test #2175: itkWarpHarmonicEnergyCalculatorTest ........................................... Passed 0.04 sec Start 2177: itkPCAShapeSignedDistanceFunctionTest 2170/2822 Test #2176: itkSphereSignedDistanceFunctionTest ........................................... Passed 0.04 sec Start 2178: itkBoxMeanImageFilterTest3 2171/2822 Test #2177: itkPCAShapeSignedDistanceFunctionTest ......................................... Passed 0.05 sec Start 2179: itkBoxMeanImageFilterTest10 2172/2822 Test #2178: itkBoxMeanImageFilterTest3 .................................................... Passed 0.08 sec Start 2180: itkBoxSigmaImageFilterTest3 2173/2822 Test #2179: itkBoxMeanImageFilterTest10 ................................................... Passed 0.07 sec Start 2181: itkBoxSigmaImageFilterTest10 2174/2822 Test #2180: itkBoxSigmaImageFilterTest3 ................................................... Passed 0.06 sec Start 2182: itkDiscreteGaussianImageFilterTest2 2175/2822 Test #2181: itkBoxSigmaImageFilterTest10 .................................................. Passed 0.08 sec Start 2183: itkSmoothingRecursiveGaussianImageFilterTest 2176/2822 Test #2182: itkDiscreteGaussianImageFilterTest2 ........................................... Passed 0.07 sec Start 2184: itkSmoothingRecursiveGaussianImageFilterOnVectorImageTest 2177/2822 Test #2183: itkSmoothingRecursiveGaussianImageFilterTest .................................. Passed 0.05 sec Start 2185: itkSmoothingRecursiveGaussianImageFilterOnImageOfVectorTest 2178/2822 Test #2184: itkSmoothingRecursiveGaussianImageFilterOnVectorImageTest ..................... Passed 0.04 sec Start 2186: itkSmoothingRecursiveGaussianImageFilterOnImageAdaptorTest 2179/2822 Test #2185: itkSmoothingRecursiveGaussianImageFilterOnImageOfVectorTest ................... Passed 0.04 sec Start 2187: itkMeanImageFilterTest 2180/2822 Test #2186: itkSmoothingRecursiveGaussianImageFilterOnImageAdaptorTest .................... Passed 0.04 sec Start 2188: itkDiscreteGaussianImageFilterTest 2181/2822 Test #2187: itkMeanImageFilterTest ........................................................ Passed 0.04 sec Start 2189: itkMedianImageFilterTest 2182/2822 Test #2189: itkMedianImageFilterTest ...................................................... Passed 0.04 sec Start 2190: itkRecursiveGaussianImageFiltersOnTensorsTest 2183/2822 Test #2190: itkRecursiveGaussianImageFiltersOnTensorsTest ................................. Passed 0.04 sec Start 2191: itkRecursiveGaussianImageFiltersOnVectorImageTest 2184/2822 Test #2191: itkRecursiveGaussianImageFiltersOnVectorImageTest ............................. Passed 0.04 sec Start 2192: itkRecursiveGaussianImageFiltersTest 2185/2822 Test #2188: itkDiscreteGaussianImageFilterTest ............................................ Passed 0.16 sec Start 2193: itkRecursiveGaussianScaleSpaceTest1 2186/2822 Test #2193: itkRecursiveGaussianScaleSpaceTest1 ........................................... Passed 0.03 sec Start 2194: itkSpatialFunctionImageEvaluatorFilterTest 2187/2822 Test #2192: itkRecursiveGaussianImageFiltersTest .......................................... Passed 0.08 sec Start 2195: itkContourSpatialObjectPointTest 2188/2822 Test #2194: itkSpatialFunctionImageEvaluatorFilterTest .................................... Passed 0.05 sec Start 2196: itkSpatialObjectToImageFilterTest 2189/2822 Test #2195: itkContourSpatialObjectPointTest .............................................. Passed 0.06 sec Start 2197: itkLandmarkSpatialObjectTest 2190/2822 Test #2196: itkSpatialObjectToImageFilterTest ............................................. Passed 0.05 sec Start 2198: itkPolygonGroupSpatialObjectTest 2191/2822 Test #2197: itkLandmarkSpatialObjectTest .................................................. Passed 0.05 sec Start 2199: itkImageSpatialObjectTest 2192/2822 Test #2198: itkPolygonGroupSpatialObjectTest .............................................. Passed 0.06 sec Start 2200: itkSpatialObjectToImageStatisticsCalculatorTest 2193/2822 Test #2199: itkImageSpatialObjectTest ..................................................... Passed 0.05 sec Start 2201: itkImageMaskSpatialObjectTest 2194/2822 Test #2200: itkSpatialObjectToImageStatisticsCalculatorTest ............................... Passed 0.04 sec Start 2202: itkImageMaskSpatialObjectTest2 2195/2822 Test #2201: itkImageMaskSpatialObjectTest ................................................. Passed 0.04 sec Start 2203: itkImageMaskSpatialObjectTest3 2196/2822 Test #2203: itkImageMaskSpatialObjectTest3 ................................................ Passed 0.04 sec Start 2204: itkImageMaskSpatialObjectTest4 2197/2822 Test #2202: itkImageMaskSpatialObjectTest2 ................................................ Passed 0.06 sec Start 2205: itkBlobSpatialObjectTest 2198/2822 Test #2204: itkImageMaskSpatialObjectTest4 ................................................ Passed 0.04 sec Start 2206: itkContourSpatialObjectTest 2199/2822 Test #2205: itkBlobSpatialObjectTest ...................................................... Passed 0.04 sec Start 2207: itkSceneSpatialObjectTest 2200/2822 Test #2206: itkContourSpatialObjectTest ................................................... Passed 0.04 sec Start 2208: itkSurfaceSpatialObjectTest 2201/2822 Test #2207: itkSceneSpatialObjectTest ..................................................... Passed 0.04 sec Start 2209: itkMetaArrowConverterTest 2202/2822 Test #2209: itkMetaArrowConverterTest ..................................................... Passed 0.03 sec Start 2210: itkMetaGaussianConverterTest 2203/2822 Test #2208: itkSurfaceSpatialObjectTest ................................................... Passed 0.04 sec Start 2211: itkTubeSpatialObjectTest 2204/2822 Test #2211: itkTubeSpatialObjectTest ...................................................... Passed 0.04 sec Start 2212: itkSpatialObjectToPointSetFilterTest 2205/2822 Test #2210: itkMetaGaussianConverterTest .................................................. Passed 0.04 sec Start 2213: itkSpatialObjectDuplicatorTest 2206/2822 Test #2213: itkSpatialObjectDuplicatorTest ................................................ Passed 0.04 sec Start 2214: itkPlaneSpatialObjectTest 2207/2822 Test #2212: itkSpatialObjectToPointSetFilterTest .......................................... Passed 0.05 sec Start 2215: itkCylinderSpatialObjectTest 2208/2822 Test #2215: itkCylinderSpatialObjectTest .................................................. Passed 0.04 sec Start 2216: itkSpatialObjectTreeContainerTest 2209/2822 Test #2214: itkPlaneSpatialObjectTest ..................................................... Passed 0.05 sec Start 2217: itkAffineGeometryFrameTest 2210/2822 Test #2216: itkSpatialObjectTreeContainerTest ............................................. Passed 0.04 sec Start 2218: itkBoxSpatialObjectTest 2211/2822 Test #2217: itkAffineGeometryFrameTest .................................................... Passed 0.05 sec Start 2219: itkGaussianSpatialObjectTest 2212/2822 Test #2219: itkGaussianSpatialObjectTest .................................................. Passed 0.05 sec Start 2220: itkPolygonSpatialObjectTest 2213/2822 Test #2220: itkPolygonSpatialObjectTest ................................................... Passed 0.04 sec Start 2221: itkEllipseSpatialObjectTest 2214/2822 Test #2221: itkEllipseSpatialObjectTest ................................................... Passed 0.04 sec Start 2222: itkMeshSpatialObjectTest 2215/2822 Test #2218: itkBoxSpatialObjectTest ....................................................... Passed 0.17 sec Start 2223: itkArrowSpatialObjectTest 2216/2822 Test #2222: itkMeshSpatialObjectTest ...................................................... Passed 0.04 sec Start 2224: itkLineSpatialObjectTest 2217/2822 Test #2223: itkArrowSpatialObjectTest ..................................................... Passed 0.04 sec Start 2225: itkSpatialObjectTreeContainerIteratorTest 2218/2822 Test #2224: itkLineSpatialObjectTest ...................................................... Passed 0.04 sec Start 2226: itkNewMetaObjectTypeTest 2219/2822 Test #2225: itkSpatialObjectTreeContainerIteratorTest ..................................... Passed 0.05 sec Start 2227: itkDecisionRuleTest 2220/2822 Test #2226: itkNewMetaObjectTypeTest ...................................................... Passed 0.04 sec Start 2228: itkDenseFrequencyContainer2Test 2221/2822 Test #2228: itkDenseFrequencyContainer2Test ............................................... Passed 0.04 sec Start 2229: itkExpectationMaximizationMixtureModelEstimatorTest 2222/2822 Test #2227: itkDecisionRuleTest ........................................................... Passed 0.05 sec Start 2230: itkGaussianDistributionTest 2223/2822 Test #2230: itkGaussianDistributionTest ................................................... Passed 0.05 sec Start 2231: itkGaussianMembershipFunctionTest 2224/2822 Test #2229: itkExpectationMaximizationMixtureModelEstimatorTest ........................... Passed 0.06 sec Start 2232: itkGaussianMixtureModelComponentTest 2225/2822 Test #2231: itkGaussianMembershipFunctionTest ............................................. Passed 0.04 sec Start 2233: itkGaussianRandomSpatialNeighborSubsamplerTest 2226/2822 Test #2232: itkGaussianMixtureModelComponentTest .......................................... Passed 0.05 sec Start 2234: itkKalmanLinearEstimatorTest 2227/2822 Test #2233: itkGaussianRandomSpatialNeighborSubsamplerTest ................................ Passed 0.05 sec Start 2235: itkKdTreeBasedKmeansEstimatorTest 2228/2822 Test #2234: itkKalmanLinearEstimatorTest .................................................. Passed 0.06 sec Start 2236: itkKdTreeGeneratorTest 2229/2822 Test #2235: itkKdTreeBasedKmeansEstimatorTest ............................................. Passed 0.05 sec Start 2237: itkKdTreeTest1 2230/2822 Test #2236: itkKdTreeGeneratorTest ........................................................ Passed 0.05 sec Start 2238: itkKdTreeTest2 2231/2822 Test #2237: itkKdTreeTest1 ................................................................ Passed 0.04 sec Start 2239: itkKdTreeTest3 2232/2822 Test #2238: itkKdTreeTest2 ................................................................ Passed 0.06 sec Start 2240: itkKdTreeTest4 2233/2822 Test #2239: itkKdTreeTest3 ................................................................ Passed 0.05 sec Start 2241: itkKdTreeTest5 2234/2822 Test #2240: itkKdTreeTest4 ................................................................ Passed 0.07 sec Start 2242: itkKdTreeTest6 2235/2822 Test #2241: itkKdTreeTest5 ................................................................ Passed 0.07 sec Start 2243: itkKdTreeTest7 2236/2822 Test #2242: itkKdTreeTest6 ................................................................ Passed 0.07 sec Start 2244: itkKdTreeTest8 2237/2822 Test #2243: itkKdTreeTest7 ................................................................ Passed 0.08 sec Start 2245: itkKdTreeTest9 2238/2822 Test #2244: itkKdTreeTest8 ................................................................ Passed 0.07 sec Start 2246: itkKdTreeTest10 2239/2822 Test #2245: itkKdTreeTest9 ................................................................ Passed 0.07 sec Start 2247: itkKdTreeTest11 2240/2822 Test #2246: itkKdTreeTest10 ............................................................... Passed 0.07 sec Start 2248: itkKdTreeTestSamplePoints 2241/2822 Test #2247: itkKdTreeTest11 ............................................................... Passed 0.05 sec Start 2249: itkMaximumDecisionRuleTest 2242/2822 Test #2248: itkKdTreeTestSamplePoints ..................................................... Passed 0.04 sec Start 2250: itkMinimumDecisionRuleTest 2243/2822 Test #2249: itkMaximumDecisionRuleTest .................................................... Passed 0.04 sec Start 2251: itkMaximumRatioDecisionRuleTest 2244/2822 Test #2250: itkMinimumDecisionRuleTest .................................................... Passed 0.04 sec Start 2252: itkMeanSampleFilterTest 2245/2822 Test #2251: itkMaximumRatioDecisionRuleTest ............................................... Passed 0.03 sec Start 2253: itkMeanSampleFilterTest2 2246/2822 Test #2252: itkMeanSampleFilterTest ....................................................... Passed 0.04 sec Start 2254: itkMeanSampleFilterTest3 2247/2822 Test #2253: itkMeanSampleFilterTest2 ...................................................... Passed 0.04 sec Start 2255: itkHistogramTest 2248/2822 Test #2254: itkMeanSampleFilterTest3 ...................................................... Passed 0.11 sec Start 2256: itkHistogramToTextureFeaturesFilterTest 2249/2822 Test #2256: itkHistogramToTextureFeaturesFilterTest ....................................... Passed 0.04 sec Start 2257: itkHistogramToTextureFeaturesFilterNaNTest 2250/2822 Test #2257: itkHistogramToTextureFeaturesFilterNaNTest .................................... Passed 0.07 sec Start 2258: itkChiSquareDistributionTest 2251/2822 Test #2258: itkChiSquareDistributionTest .................................................. Passed 0.05 sec Start 2259: itkCovarianceSampleFilterTest 2252/2822 Test #2259: itkCovarianceSampleFilterTest ................................................. Passed 0.04 sec Start 2260: itkCovarianceSampleFilterTest2 2253/2822 Test #2260: itkCovarianceSampleFilterTest2 ................................................ Passed 0.04 sec Start 2261: itkCovarianceSampleFilterTest3 2254/2822 Test #2261: itkCovarianceSampleFilterTest3 ................................................ Passed 0.13 sec Start 2262: itkWeightedCentroidKdTreeGeneratorTest1 2255/2822 Test #2262: itkWeightedCentroidKdTreeGeneratorTest1 ....................................... Passed 0.07 sec Start 2263: itkWeightedCentroidKdTreeGeneratorTest2 2256/2822 Test #2263: itkWeightedCentroidKdTreeGeneratorTest2 ....................................... Passed 0.07 sec Start 2264: itkWeightedCentroidKdTreeGeneratorTest3 2257/2822 Test #2255: itkHistogramTest .............................................................. Passed 0.60 sec Start 2265: itkWeightedCentroidKdTreeGeneratorTest4 2258/2822 Test #2264: itkWeightedCentroidKdTreeGeneratorTest3 ....................................... Passed 0.06 sec Start 2266: itkWeightedCentroidKdTreeGeneratorTest5 2259/2822 Test #2265: itkWeightedCentroidKdTreeGeneratorTest4 ....................................... Passed 0.07 sec Start 2267: itkWeightedCentroidKdTreeGeneratorTest6 2260/2822 Test #2266: itkWeightedCentroidKdTreeGeneratorTest5 ....................................... Passed 0.07 sec Start 2268: itkWeightedCentroidKdTreeGeneratorTest7 2261/2822 Test #2267: itkWeightedCentroidKdTreeGeneratorTest6 ....................................... Passed 0.07 sec Start 2269: itkWeightedCentroidKdTreeGeneratorTest8 2262/2822 Test #2268: itkWeightedCentroidKdTreeGeneratorTest7 ....................................... Passed 0.07 sec Start 2270: itkWeightedCentroidKdTreeGeneratorTest9 2263/2822 Test #2269: itkWeightedCentroidKdTreeGeneratorTest8 ....................................... Passed 0.07 sec Start 2271: itkWeightedCovarianceSampleFilterTest 2264/2822 Test #2271: itkWeightedCovarianceSampleFilterTest ......................................... Passed 0.05 sec Start 2272: itkWeightedCovarianceSampleFilterTest2 2265/2822 Test #2270: itkWeightedCentroidKdTreeGeneratorTest9 ....................................... Passed 0.08 sec Start 2273: itkWeightedMeanSampleFilterTest 2266/2822 Test #2272: itkWeightedCovarianceSampleFilterTest2 ........................................ Passed 0.05 sec Start 2274: itkDistanceMetricTest 2267/2822 Test #2273: itkWeightedMeanSampleFilterTest ............................................... Passed 0.04 sec Start 2275: itkDistanceMetricTest2 2268/2822 Test #2274: itkDistanceMetricTest ......................................................... Passed 0.05 sec Start 2276: itkDistanceToCentroidMembershipFunctionTest 2269/2822 Test #2275: itkDistanceMetricTest2 ........................................................ Passed 0.04 sec Start 2277: itkEuclideanDistanceMetricTest 2270/2822 Test #2276: itkDistanceToCentroidMembershipFunctionTest ................................... Passed 0.04 sec Start 2278: itkEuclideanSquareDistanceMetricTest 2271/2822 Test #2277: itkEuclideanDistanceMetricTest ................................................ Passed 0.04 sec Start 2279: itkListSampleTest1 2272/2822 Test #2278: itkEuclideanSquareDistanceMetricTest .......................................... Passed 0.04 sec Start 2280: itkListSampleTest2 2273/2822 Test #2279: itkListSampleTest1 ............................................................ Passed 0.04 sec Start 2281: itkListSampleTest3 2274/2822 Test #2280: itkListSampleTest2 ............................................................ Passed 0.04 sec Start 2282: itkListSampleTest4 2275/2822 Test #2281: itkListSampleTest3 ............................................................ Passed 0.05 sec Start 2283: itkImageToListSampleAdaptorTest 2276/2822 Test #2282: itkListSampleTest4 ............................................................ Passed 0.04 sec Start 2284: itkImageToListSampleAdaptorTest2 2277/2822 Test #2283: itkImageToListSampleAdaptorTest ............................................... Passed 0.04 sec Start 2285: itkImageToListSampleFilterTest 2278/2822 Test #2284: itkImageToListSampleAdaptorTest2 .............................................. Passed 0.05 sec Start 2286: itkImageToListSampleFilterTest2 2279/2822 Test #2285: itkImageToListSampleFilterTest ................................................ Passed 0.05 sec Start 2287: itkImageToListSampleFilterTest3 2280/2822 Test #2287: itkImageToListSampleFilterTest3 ............................................... Passed 0.04 sec Start 2288: itkJointDomainImageToListSampleAdaptorTest 2281/2822 Test #2286: itkImageToListSampleFilterTest2 ............................................... Passed 0.05 sec Start 2289: itkPointSetToListSampleAdaptorTest 2282/2822 Test #2289: itkPointSetToListSampleAdaptorTest ............................................ Passed 0.04 sec Start 2290: itkProbabilityDistributionTest 2283/2822 Test #2288: itkJointDomainImageToListSampleAdaptorTest .................................... Passed 0.04 sec Start 2291: itkRandomVariateGeneratorBaseTest 2284/2822 Test #2290: itkProbabilityDistributionTest ................................................ Passed 0.04 sec Start 2292: itkMahalanobisDistanceMetricTest 2285/2822 Test #2291: itkRandomVariateGeneratorBaseTest ............................................. Passed 0.04 sec Start 2293: itkManhattanDistanceMetricTest 2286/2822 Test #2293: itkManhattanDistanceMetricTest ................................................ Passed 0.04 sec Start 2294: itkMembershipFunctionBaseTest 2287/2822 Test #2292: itkMahalanobisDistanceMetricTest .............................................. Passed 0.05 sec Start 2295: itkMembershipFunctionBaseTest2 2288/2822 Test #2294: itkMembershipFunctionBaseTest ................................................. Passed 0.04 sec Start 2296: itkMembershipSampleTest1 2289/2822 Test #2295: itkMembershipFunctionBaseTest2 ................................................ Passed 0.04 sec Start 2297: itkMembershipSampleTest2 2290/2822 Test #2297: itkMembershipSampleTest2 ...................................................... Passed 0.04 sec Start 2298: itkMembershipSampleTest3 2291/2822 Test #2296: itkMembershipSampleTest1 ...................................................... Passed 0.04 sec Start 2299: itkMembershipSampleTest4 2292/2822 Test #2298: itkMembershipSampleTest3 ...................................................... Passed 0.04 sec Start 2300: itkMeasurementVectorTraitsTest 2293/2822 Test #2299: itkMembershipSampleTest4 ...................................................... Passed 0.04 sec Start 2301: itkNeighborhoodSamplerTest1 2294/2822 Test #2300: itkMeasurementVectorTraitsTest ................................................ Passed 0.04 sec Start 2302: itkMixtureModelComponentBaseTest 2295/2822 Test #2301: itkNeighborhoodSamplerTest1 ................................................... Passed 0.04 sec Start 2303: itkNormalVariateGeneratorTest1 2296/2822 Test #2303: itkNormalVariateGeneratorTest1 ................................................ Passed 0.03 sec Start 2304: itkSampleTest 2297/2822 Test #2302: itkMixtureModelComponentBaseTest .............................................. Passed 0.05 sec Start 2305: itkSampleTest2 2298/2822 Test #2304: itkSampleTest ................................................................. Passed 0.04 sec Start 2306: itkSampleTest3 2299/2822 Test #2305: itkSampleTest2 ................................................................ Passed 0.04 sec Start 2307: itkSampleTest4 2300/2822 Test #2306: itkSampleTest3 ................................................................ Passed 0.04 sec Start 2308: itkSampleToHistogramFilterTest 2301/2822 Test #2307: itkSampleTest4 ................................................................ Passed 0.04 sec Start 2309: itkSampleToHistogramFilterTest2 2302/2822 Test #2309: itkSampleToHistogramFilterTest2 ............................................... Passed 0.10 sec Start 2310: itkSampleToHistogramFilterTest3 2303/2822 Test #2308: itkSampleToHistogramFilterTest ................................................ Passed 0.19 sec Start 2311: itkSampleToHistogramFilterTest4 2304/2822 Test #2310: itkSampleToHistogramFilterTest3 ............................................... Passed 0.11 sec Start 2312: itkSampleToHistogramFilterTest5 2305/2822 Test #2311: itkSampleToHistogramFilterTest4 ............................................... Passed 0.08 sec Start 2313: itkSampleToHistogramFilterTest6 2306/2822 Test #2313: itkSampleToHistogramFilterTest6 ............................................... Passed 0.08 sec Start 2314: itkSampleToHistogramFilterTest7 2307/2822 Test #2314: itkSampleToHistogramFilterTest7 ............................................... Passed 0.08 sec Start 2315: itkSampleToSubsampleFilterTest1 2308/2822 Test #2315: itkSampleToSubsampleFilterTest1 ............................................... Passed 0.05 sec Start 2316: itkScalarImageToCooccurrenceListSampleFilterTest 2309/2822 Test #2312: itkSampleToHistogramFilterTest5 ............................................... Passed 0.27 sec Start 2317: itkScalarImageToCooccurrenceMatrixFilterTest 2310/2822 Test #2316: itkScalarImageToCooccurrenceListSampleFilterTest .............................. Passed 0.04 sec Start 2318: itkScalarImageToCooccurrenceMatrixFilterTest2 2311/2822 Test #2317: itkScalarImageToCooccurrenceMatrixFilterTest .................................. Passed 0.04 sec Start 2319: itkScalarImageToTextureFeaturesFilterTest 2312/2822 Test #2318: itkScalarImageToCooccurrenceMatrixFilterTest2 ................................. Passed 0.04 sec Start 2320: itkScalarImageToRunLengthMatrixFilterTest 2313/2822 Test #2320: itkScalarImageToRunLengthMatrixFilterTest ..................................... Passed 0.04 sec Start 2321: itkScalarImageToRunLengthFeaturesFilterTest 2314/2822 Test #2321: itkScalarImageToRunLengthFeaturesFilterTest ................................... Passed 0.05 sec Start 2322: itkSparseFrequencyContainer2Test 2315/2822 Test #2319: itkScalarImageToTextureFeaturesFilterTest ..................................... Passed 0.12 sec Start 2323: itkSpatialNeighborSubsamplerTest 2316/2822 Test #2322: itkSparseFrequencyContainer2Test .............................................. Passed 0.04 sec Start 2324: itkStandardDeviationPerComponentSampleFilterTest 2317/2822 Test #2323: itkSpatialNeighborSubsamplerTest .............................................. Passed 0.04 sec Start 2325: itkStatisticsTypesTest 2318/2822 Test #2324: itkStandardDeviationPerComponentSampleFilterTest .............................. Passed 0.04 sec Start 2326: itkSubsampleTest 2319/2822 Test #2325: itkStatisticsTypesTest ........................................................ Passed 0.06 sec Start 2327: itkSubsampleTest2 2320/2822 Test #2326: itkSubsampleTest .............................................................. Passed 0.04 sec Start 2328: itkSubsampleTest3 2321/2822 Test #2327: itkSubsampleTest2 ............................................................. Passed 0.05 sec Start 2329: itkTDistributionTest 2322/2822 Test #2328: itkSubsampleTest3 ............................................................. Passed 0.04 sec Start 2330: itkStatisticsAlgorithmTest 2323/2822 Test #2330: itkStatisticsAlgorithmTest .................................................... Passed 0.04 sec Start 2331: itkStatisticsAlgorithmTest2 2324/2822 Test #2329: itkTDistributionTest .......................................................... Passed 0.05 sec Start 2332: itkUniformRandomSpatialNeighborSubsamplerTest 2325/2822 Test #2331: itkStatisticsAlgorithmTest2 ................................................... Passed 0.04 sec Start 2333: itkVectorContainerToListSampleAdaptorTest 2326/2822 Test #2332: itkUniformRandomSpatialNeighborSubsamplerTest ................................. Passed 0.05 sec Start 2334: itkNormalVariateGeneratorPythonTest 2327/2822 Test #2333: itkVectorContainerToListSampleAdaptorTest ..................................... Passed 0.04 sec Start 2335: itkTestingExtractSliceImageFilterTest 2328/2822 Test #2335: itkTestingExtractSliceImageFilterTest ......................................... Passed 0.06 sec Start 2336: itkTestingStretchIntensityImageFilterTest 2329/2822 Test #2336: itkTestingStretchIntensityImageFilterTest ..................................... Passed 0.04 sec Start 2337: itkOtsuThresholdCalculatorTest 2330/2822 Test #2337: itkOtsuThresholdCalculatorTest ................................................ Passed 0.06 sec Start 2338: itkOtsuMultipleThresholdsImageFilterTest 2331/2822 Test #2338: itkOtsuMultipleThresholdsImageFilterTest ...................................... Passed 0.10 sec Start 2339: itkThresholdLabelerImageFilterTest 2332/2822 Test #2339: itkThresholdLabelerImageFilterTest ............................................ Passed 0.05 sec Start 2340: itkBinaryThresholdImageFilterTest 2333/2822 Test #2340: itkBinaryThresholdImageFilterTest ............................................. Passed 0.04 sec Start 2341: itkThresholdImageFilterTest 2334/2822 Test #2341: itkThresholdImageFilterTest ................................................... Passed 0.04 sec Start 2342: itkOtsuMultipleThresholdsCalculatorTest 2335/2822 Test #2342: itkOtsuMultipleThresholdsCalculatorTest ....................................... Passed 0.05 sec Start 2343: itkBinaryThresholdImageFilterTest2 2336/2822 Test #2343: itkBinaryThresholdImageFilterTest2 ............................................ Passed 0.07 sec Start 2344: itkBinaryThresholdProjectionImageFilterTest 2337/2822 Test #2344: itkBinaryThresholdProjectionImageFilterTest ................................... Passed 0.06 sec Start 2345: itkBinaryThresholdSpatialFunctionTest 2338/2822 Test #2345: itkBinaryThresholdSpatialFunctionTest ......................................... Passed 0.06 sec Start 2346: itkHuangThresholdImageFilterTest 2339/2822 Test #2346: itkHuangThresholdImageFilterTest .............................................. Passed 0.07 sec Start 2347: itkHuangMaskedThresholdImageFilterTest 2340/2822 Test #2347: itkHuangMaskedThresholdImageFilterTest ........................................ Passed 0.07 sec Start 2348: itkIntermodesThresholdImageFilterTest 2341/2822 Test #2348: itkIntermodesThresholdImageFilterTest ......................................... Passed 0.07 sec Start 2349: itkIntermodesMaskedThresholdImageFilterTest 2342/2822 Test #2349: itkIntermodesMaskedThresholdImageFilterTest ................................... Passed 0.08 sec Start 2350: itkIsoDataThresholdImageFilterTest 2343/2822 Test #2350: itkIsoDataThresholdImageFilterTest ............................................ Passed 0.09 sec Start 2351: itkIsoDataMaskedThresholdImageFilterTest 2344/2822 Test #2351: itkIsoDataMaskedThresholdImageFilterTest ...................................... Passed 0.07 sec Start 2352: itkKittlerIllingworthThresholdImageFilterTest 2345/2822 Test #2352: itkKittlerIllingworthThresholdImageFilterTest ................................. Passed 0.08 sec Start 2353: itkKittlerIllingworthMaskedThresholdImageFilterTest 2346/2822 Test #2150: itkScalarChanAndVeseDenseLevelSetImageFilterTest2_0 ........................... Passed 11.14 sec Start 2354: itkLiThresholdImageFilterTest 2347/2822 Test #2353: itkKittlerIllingworthMaskedThresholdImageFilterTest ........................... Passed 0.07 sec Start 2355: itkLiMaskedThresholdImageFilterTest 2348/2822 Test #2354: itkLiThresholdImageFilterTest ................................................. Passed 0.07 sec Start 2356: itkMaximumEntropyThresholdImageFilterTest 2349/2822 Test #2355: itkLiMaskedThresholdImageFilterTest ........................................... Passed 0.07 sec Start 2357: itkMaximumEntropyMaskedThresholdImageFilterTest 2350/2822 Test #2356: itkMaximumEntropyThresholdImageFilterTest ..................................... Passed 0.07 sec Start 2358: itkMomentsThresholdImageFilterTest 2351/2822 Test #2357: itkMaximumEntropyMaskedThresholdImageFilterTest ............................... Passed 0.07 sec Start 2359: itkMomentsMaskedThresholdImageFilterTest 2352/2822 Test #2152: itkScalarChanAndVeseDenseLevelSetImageFilterTest2_2 ........................... Passed 11.06 sec Start 2360: itkOtsuThresholdImageFilterTest 2353/2822 Test #2358: itkMomentsThresholdImageFilterTest ............................................ Passed 0.07 sec Start 2361: itkOtsuMultipleThresholdsImageFilterTest2 2354/2822 Test #2359: itkMomentsMaskedThresholdImageFilterTest ...................................... Passed 0.07 sec Start 2362: itkOtsuMultipleThresholdsImageFilterTest3 2355/2822 Test #2360: itkOtsuThresholdImageFilterTest ............................................... Passed 0.06 sec Start 2363: itkOtsuMultipleThresholdsImageFilterTest4 2356/2822 Test #2361: itkOtsuMultipleThresholdsImageFilterTest2 ..................................... Passed 0.07 sec Start 2364: itkOtsuThresholdCalculatorVersusOtsuMultipleThresholdsCalculatorTest 2357/2822 Test #2363: itkOtsuMultipleThresholdsImageFilterTest4 ..................................... Passed 0.07 sec Start 2365: itkOtsuMaskedThresholdImageFilterTest 2358/2822 Test #2362: itkOtsuMultipleThresholdsImageFilterTest3 ..................................... Passed 0.09 sec Start 2366: itkRenyiEntropyThresholdImageFilterTest 2359/2822 Test #2364: itkOtsuThresholdCalculatorVersusOtsuMultipleThresholdsCalculatorTest .......... Passed 0.08 sec Start 2367: itkRenyiEntropyMaskedThresholdImageFilterTest 2360/2822 Test #2365: itkOtsuMaskedThresholdImageFilterTest ......................................... Passed 0.07 sec Start 2368: itkShanbhagThresholdImageFilterTest 2361/2822 Test #2366: itkRenyiEntropyThresholdImageFilterTest ....................................... Passed 0.07 sec Start 2369: itkShanbhagMaskedThresholdImageFilterTest 2362/2822 Test #2367: itkRenyiEntropyMaskedThresholdImageFilterTest ................................. Passed 0.07 sec Start 2370: itkTriangleThresholdImageFilterTest 2363/2822 Test #2369: itkShanbhagMaskedThresholdImageFilterTest ..................................... Passed 0.07 sec Start 2371: itkTriangleMaskedThresholdImageFilterTest 2364/2822 Test #2368: itkShanbhagThresholdImageFilterTest ........................................... Passed 0.09 sec Start 2372: itkYenThresholdImageFilterTest 2365/2822 Test #2371: itkTriangleMaskedThresholdImageFilterTest ..................................... Passed 0.06 sec Start 2373: itkYenMaskedThresholdImageFilterTest 2366/2822 Test #2370: itkTriangleThresholdImageFilterTest ........................................... Passed 0.10 sec Start 2374: itkHuangThresholdImageFilterTestShort 2367/2822 Test #2372: itkYenThresholdImageFilterTest ................................................ Passed 0.07 sec Start 2375: itkIntermodesThresholdImageFilterTestShort 2368/2822 Test #2373: itkYenMaskedThresholdImageFilterTest .......................................... Passed 0.06 sec Start 2376: itkIsoDataThresholdImageFilterTestShort 2369/2822 Test #2374: itkHuangThresholdImageFilterTestShort ......................................... Passed 0.07 sec Start 2377: itkKittlerIllingworthThresholdImageFilterTestShort 2370/2822 Test #2375: itkIntermodesThresholdImageFilterTestShort .................................... Passed 0.06 sec Start 2378: itkLiThresholdImageFilterTestShort 2371/2822 Test #2376: itkIsoDataThresholdImageFilterTestShort ....................................... Passed 0.06 sec Start 2379: itkMaximumEntropyThresholdImageFilterTestShort 2372/2822 Test #2377: itkKittlerIllingworthThresholdImageFilterTestShort ............................ Passed 0.07 sec Start 2380: itkMomentsThresholdImageFilterTestShort 2373/2822 Test #2378: itkLiThresholdImageFilterTestShort ............................................ Passed 0.06 sec Start 2381: itkOtsuThresholdImageFilterTestShort 2374/2822 Test #2380: itkMomentsThresholdImageFilterTestShort ....................................... Passed 0.06 sec Start 2382: itkRenyiEntropyThresholdImageFilterTestShort 2375/2822 Test #2381: itkOtsuThresholdImageFilterTestShort .......................................... Passed 0.06 sec Start 2383: itkShanbhagThresholdImageFilterTestShort 2376/2822 Test #2379: itkMaximumEntropyThresholdImageFilterTestShort ................................ Passed 0.08 sec Start 2384: itkTriangleThresholdImageFilterTestShort 2377/2822 Test #2383: itkShanbhagThresholdImageFilterTestShort ...................................... Passed 0.06 sec Start 2385: itkYenThresholdImageFilterTestShort 2378/2822 Test #2384: itkTriangleThresholdImageFilterTestShort ...................................... Passed 0.06 sec Start 2386: itkKappaSigmaThresholdImageCalculatorTest01 2379/2822 Test #2382: itkRenyiEntropyThresholdImageFilterTestShort .................................. Passed 0.07 sec Start 2387: itkKappaSigmaThresholdImageCalculatorTest02 2380/2822 Test #2334: itkNormalVariateGeneratorPythonTest ........................................... Passed 2.10 sec Start 2388: itkKappaSigmaThresholdImageFilterTest01 2381/2822 Test #2386: itkKappaSigmaThresholdImageCalculatorTest01 ................................... Passed 0.05 sec Start 2389: itkKappaSigmaThresholdImageFilterTest02 2382/2822 Test #2385: itkYenThresholdImageFilterTestShort ........................................... Passed 0.06 sec Start 2390: itkFixedCenterOfRotationAffineTransformTest 2383/2822 Test #2387: itkKappaSigmaThresholdImageCalculatorTest02 ................................... Passed 0.06 sec Start 2391: itkAffineTransformTest 2384/2822 Test #2388: itkKappaSigmaThresholdImageFilterTest01 ....................................... Passed 0.06 sec Start 2392: itkScaleSkewVersor3DTransformTest 2385/2822 Test #2389: itkKappaSigmaThresholdImageFilterTest02 ....................................... Passed 0.05 sec Start 2393: itkEuler3DTransformTest 2386/2822 Test #2390: itkFixedCenterOfRotationAffineTransformTest ................................... Passed 0.06 sec Start 2394: itkCenteredRigid2DTransformTest 2387/2822 Test #2391: itkAffineTransformTest ........................................................ Passed 0.08 sec Start 2395: itkEuler2DTransformTest 2388/2822 Test #2392: itkScaleSkewVersor3DTransformTest ............................................. Passed 0.04 sec Start 2396: itkRigid3DTransformTest 2389/2822 Test #2393: itkEuler3DTransformTest ....................................................... Passed 0.04 sec Start 2397: itkScaleVersor3DTransformTest 2390/2822 Test #2394: itkCenteredRigid2DTransformTest ............................................... Passed 0.04 sec Start 2398: itkTransformTest 2391/2822 Test #2153: itkScalarChanAndVeseDenseLevelSetImageFilterTest2_3 ........................... Passed 10.99 sec Start 2399: itkRigid3DPerspectiveTransformTest 2392/2822 Test #2395: itkEuler2DTransformTest ....................................................... Passed 0.04 sec Start 2400: itkSimilarity2DTransformTest 2393/2822 Test #2397: itkScaleVersor3DTransformTest ................................................. Passed 0.04 sec Start 2401: itkTranslationTransformTest 2394/2822 Test #2396: itkRigid3DTransformTest ....................................................... Passed 0.05 sec Start 2402: itkIdentityTransformTest 2395/2822 Test #2398: itkTransformTest .............................................................. Passed 0.04 sec Start 2403: itkv3Rigid3DTransformTest 2396/2822 Test #2399: itkRigid3DPerspectiveTransformTest ............................................ Passed 0.04 sec Start 2404: itkCenteredAffineTransformTest 2397/2822 Test #2401: itkTranslationTransformTest ................................................... Passed 0.04 sec Start 2405: itkRigid2DTransformTest 2398/2822 Test #2400: itkSimilarity2DTransformTest .................................................. Passed 0.05 sec Start 2406: itkScaleLogarithmicTransformTest 2399/2822 Test #2402: itkIdentityTransformTest ...................................................... Passed 0.04 sec Start 2407: itkQuaternionRigidTransformTest 2400/2822 Test #2403: itkv3Rigid3DTransformTest ..................................................... Passed 0.04 sec Start 2408: itkScaleTransformTest 2401/2822 Test #2404: itkCenteredAffineTransformTest ................................................ Passed 0.04 sec Start 2409: itkSimilarity3DTransformTest 2402/2822 Test #2406: itkScaleLogarithmicTransformTest .............................................. Passed 0.04 sec Start 2410: itkAzimuthElevationToCartesianTransformTest 2403/2822 Test #2405: itkRigid2DTransformTest ....................................................... Passed 0.05 sec Start 2411: itkCenteredEuler3DTransformTest 2404/2822 Test #2407: itkQuaternionRigidTransformTest ............................................... Passed 0.04 sec Start 2412: itkTransformsSetParametersTest 2405/2822 Test #2408: itkScaleTransformTest ......................................................... Passed 0.05 sec Start 2413: itkBSplineDeformableTransformTest 2406/2822 Test #2409: itkSimilarity3DTransformTest .................................................. Passed 0.04 sec Start 2414: itkBSplineDeformableTransformTest2 2407/2822 Test #2410: itkAzimuthElevationToCartesianTransformTest ................................... Passed 0.04 sec Start 2415: itkBSplineDeformableTransformTest3 2408/2822 Test #2411: itkCenteredEuler3DTransformTest ............................................... Passed 0.05 sec Start 2416: itkBSplineDeformableTransformTest4 2409/2822 Test #2412: itkTransformsSetParametersTest ................................................ Passed 0.06 sec Start 2417: itkBSplineDeformableTransformTest5 2410/2822 Test #2413: itkBSplineDeformableTransformTest ............................................. Passed 0.05 sec Start 2418: itkBSplineDeformableTransformTest6 2411/2822 Test #2414: itkBSplineDeformableTransformTest2 ............................................ Passed 0.13 sec Start 2419: itkBSplineDeformableTransformTest7 2412/2822 Test #2415: itkBSplineDeformableTransformTest3 ............................................ Passed 0.16 sec Start 2420: itkBSplineTransformTest 2413/2822 Test #2417: itkBSplineDeformableTransformTest5 ............................................ Passed 0.14 sec Start 2421: itkBSplineTransformTest2 2414/2822 Test #2416: itkBSplineDeformableTransformTest4 ............................................ Passed 0.18 sec Start 2422: itkBSplineTransformTest3 2415/2822 Test #2418: itkBSplineDeformableTransformTest6 ............................................ Passed 0.17 sec Start 2423: itkBSplineTransformTest4 2416/2822 Test #2420: itkBSplineTransformTest ....................................................... Passed 0.05 sec Start 2424: itkBSplineTransformTest5 2417/2822 Test #2419: itkBSplineDeformableTransformTest7 ............................................ Passed 0.15 sec Start 2425: itkBSplineTransformTest6 2418/2822 Test #2421: itkBSplineTransformTest2 ...................................................... Passed 0.13 sec Start 2426: itkBSplineTransformTest7 2419/2822 Test #2422: itkBSplineTransformTest3 ...................................................... Passed 0.13 sec Start 2427: itkBSplineTransformInitializerTest1 2420/2822 Test #2424: itkBSplineTransformTest5 ...................................................... Passed 0.15 sec Start 2428: itkBSplineTransformInitializerTest2 2421/2822 Test #2423: itkBSplineTransformTest4 ...................................................... Passed 0.17 sec Start 2429: itkVersorRigid3DTransformTest 2422/2822 Test #2429: itkVersorRigid3DTransformTest ................................................. Passed 0.04 sec Start 2430: itkVersorTransformTest 2423/2822 Test #2428: itkBSplineTransformInitializerTest2 ........................................... Passed 0.06 sec Start 2431: itkSplineKernelTransformTest 2424/2822 Test #2425: itkBSplineTransformTest6 ...................................................... Passed 0.17 sec Start 2432: itkCompositeTransformTest 2425/2822 Test #2426: itkBSplineTransformTest7 ...................................................... Passed 0.14 sec Start 2433: itkTransformCloneTest 2426/2822 Test #2430: itkVersorTransformTest ........................................................ Passed 0.04 sec Start 2434: itkMultiTransformTest 2427/2822 Test #2433: itkTransformCloneTest ......................................................... Passed 0.03 sec Start 2435: itkTestTransformGetInverse 2428/2822 Test #2427: itkBSplineTransformInitializerTest1 ........................................... Passed 0.16 sec Start 2436: itkTransformFactoryBaseTest 2429/2822 Test #2432: itkCompositeTransformTest ..................................................... Passed 0.05 sec Start 2437: itkDeformationFieldSourceTest 2430/2822 Test #2431: itkSplineKernelTransformTest .................................................. Passed 0.05 sec Start 2438: itkInverseDeformationFieldImageFilterTest 2431/2822 Test #2155: itkScalarChanAndVeseDenseLevelSetImageFilterTest4 ............................. Passed 11.45 sec Start 2439: itkIterativeInverseDeformationFieldImageFilterTest 2432/2822 Test #2434: itkMultiTransformTest ......................................................... Passed 0.10 sec Start 2440: itkDeformationFieldJacobianDeterminantFilterTest 2433/2822 Test #2436: itkTransformFactoryBaseTest ................................................... Passed 0.09 sec Start 2441: itkTransformToDeformationFieldSourceTest03 2434/2822 Test #2437: itkDeformationFieldSourceTest ................................................. Passed 0.10 sec Start 2442: itkTransformToDeformationFieldSourceTest01 2435/2822 Test #2438: itkInverseDeformationFieldImageFilterTest ..................................... Passed 0.14 sec Start 2443: itkTransformToDeformationFieldSourceTest02 2436/2822 Test #2439: itkIterativeInverseDeformationFieldImageFilterTest ............................ Passed 0.10 sec Start 2444: itkExponentialDeformationFieldImageFilterTest 2437/2822 Test #2442: itkTransformToDeformationFieldSourceTest01 .................................... Passed 0.09 sec Start 2445: itkOtsuThresholdImageCalculatorTest 2438/2822 Test #2441: itkTransformToDeformationFieldSourceTest03 .................................... Passed 0.12 sec Start 2446: V3CompatibilityAddConstantToImageFilterTest 2439/2822 Test #2443: itkTransformToDeformationFieldSourceTest02 .................................... Passed 0.12 sec Start 2447: V3CompatibilitySubtractConstantFromaImageFilterTest 2440/2822 Test #2444: itkExponentialDeformationFieldImageFilterTest ................................. Passed 0.11 sec Start 2448: V3CompatibilityMultiplyByConstantImageFilterTest 2441/2822 Test #2445: itkOtsuThresholdImageCalculatorTest ........................................... Passed 0.09 sec Start 2449: V3CompatibilityDivideByConstantImageFilterTest 2442/2822 Test #2446: V3CompatibilityAddConstantToImageFilterTest ................................... Passed 0.10 sec Start 2450: itkGradientToMagnitudeImageFilterTest 2443/2822 Test #2447: V3CompatibilitySubtractConstantFromaImageFilterTest ........................... Passed 0.05 sec Start 2451: ITKVideoCoreInDoxygenGroup 2444/2822 Test #2448: V3CompatibilityMultiplyByConstantImageFilterTest .............................. Passed 0.09 sec Start 2452: ITKVideoIOInDoxygenGroup 2445/2822 Test #2451: ITKVideoCoreInDoxygenGroup .................................................... Passed 0.07 sec Start 2453: VideoToVideoFilterTest 2446/2822 Test #2450: itkGradientToMagnitudeImageFilterTest ......................................... Passed 0.08 sec Start 2454: VideoSourceTest 2447/2822 Test #2452: ITKVideoIOInDoxygenGroup ...................................................... Passed 0.06 sec Start 2455: TemporalProcessObjectTest 2448/2822 Test #2449: V3CompatibilityDivideByConstantImageFilterTest ................................ Passed 0.14 sec Start 2456: RingBufferTest 2449/2822 Test #2453: VideoToVideoFilterTest ........................................................ Passed 0.08 sec Start 2457: TemporalRegionTest 2450/2822 Test #2455: TemporalProcessObjectTest ..................................................... Passed 0.07 sec Start 2458: TemporalDataObjectTest 2451/2822 Test #2456: RingBufferTest ................................................................ Passed 0.09 sec Start 2459: ITKVideoFilteringInDoxygenGroup 2452/2822 Test #2458: TemporalDataObjectTest ........................................................ Passed 0.04 sec Start 2460: FrameAverageVideoFilterTest 2453/2822 Test #2454: VideoSourceTest ............................................................... Passed 0.15 sec Start 2461: DecimateFramesVideoFilterTest 2454/2822 Test #2459: ITKVideoFilteringInDoxygenGroup ............................................... Passed 0.04 sec Start 2462: ImageFilterToVideoFilterWrapperTest 2455/2822 Test #2457: TemporalRegionTest ............................................................ Passed 0.14 sec Start 2463: FrameDifferenceVideoFilterTest 2456/2822 Test #2461: DecimateFramesVideoFilterTest ................................................. Passed 0.18 sec Start 2464: VideoFileReaderWriterTest 2457/2822 Test #2462: ImageFilterToVideoFilterWrapperTest ........................................... Passed 0.26 sec Start 2465: FileListVideoIOTest 2458/2822 Test #2464: VideoFileReaderWriterTest ..................................................... Passed 0.27 sec Start 2466: FileListVideoIOFactoryTest 2459/2822 Test #2466: FileListVideoIOFactoryTest .................................................... Passed 0.04 sec Start 2467: itkVoronoiSegmentationImageFilterTest 2460/2822 Test #2440: itkDeformationFieldJacobianDeterminantFilterTest .............................. Passed 0.99 sec Start 2468: itkVoronoiSegmentationRGBImageFilterTest 2461/2822 Test #2463: FrameDifferenceVideoFilterTest ................................................ Passed 0.47 sec Start 2469: itkVoronoiDiagram2DTest 2462/2822 Test #2465: FileListVideoIOTest ........................................................... Passed 0.27 sec Start 2470: itkVoronoiPartitioningImageFilterTest1 2463/2822 Test #2469: itkVoronoiDiagram2DTest ....................................................... Passed 0.05 sec Start 2471: itkVoronoiPartitioningImageFilterTest2 2464/2822 Test #2460: FrameAverageVideoFilterTest ................................................... Passed 0.62 sec Start 2472: itkTobogganImageFilterTest 2465/2822 Test #2467: itkVoronoiSegmentationImageFilterTest ......................................... Passed 0.14 sec Start 2473: itkIsolatedWatershedImageFilterTest 2466/2822 Test #2471: itkVoronoiPartitioningImageFilterTest2 ........................................ Passed 0.14 sec Start 2474: itkIsolatedWatershedImageFilterTestCloseThresholds 2467/2822 Test #2470: itkVoronoiPartitioningImageFilterTest1 ........................................ Passed 0.24 sec Start 2475: itkWatershedImageFilterTest 2468/2822 Test #2468: itkVoronoiSegmentationRGBImageFilterTest ...................................... Passed 0.31 sec Start 2476: itkMorphologicalWatershedFromMarkersImageFilterTestM0F0 2469/2822 Test #2474: itkIsolatedWatershedImageFilterTestCloseThresholds ............................ Passed 0.13 sec Start 2477: itkMorphologicalWatershedFromMarkersImageFilterTestM0F1 2470/2822 Test #2472: itkTobogganImageFilterTest .................................................... Passed 0.29 sec Start 2478: itkMorphologicalWatershedFromMarkersImageFilterTestM1F0 2471/2822 Test #2475: itkWatershedImageFilterTest ................................................... Passed 0.17 sec Start 2479: itkMorphologicalWatershedFromMarkersImageFilterTestM1F1 2472/2822 Test #2476: itkMorphologicalWatershedFromMarkersImageFilterTestM0F0 ....................... Passed 0.17 sec Start 2480: itkMorphologicalWatershedImageFilterTestButtonHoleM0F0 2473/2822 Test #2477: itkMorphologicalWatershedFromMarkersImageFilterTestM0F1 ....................... Passed 0.15 sec Start 2481: itkMorphologicalWatershedImageFilterTestPassValuesM0F0 2474/2822 Test #2478: itkMorphologicalWatershedFromMarkersImageFilterTestM1F0 ....................... Passed 0.13 sec Start 2482: itkMorphologicalWatershedImageFilterTestPlateauM0F0 2475/2822 Test #2473: itkIsolatedWatershedImageFilterTest ........................................... Passed 0.45 sec Start 2483: itkMorphologicalWatershedImageFilterTestThickLinesM0F0 2476/2822 Test #2479: itkMorphologicalWatershedFromMarkersImageFilterTestM1F1 ....................... Passed 0.14 sec Start 2484: itkMorphologicalWatershedImageFilterTestButtonHoleM0F1 2477/2822 Test #2480: itkMorphologicalWatershedImageFilterTestButtonHoleM0F0 ........................ Passed 0.11 sec Start 2485: itkMorphologicalWatershedImageFilterTestPassValuesM0F1 2478/2822 Test #2481: itkMorphologicalWatershedImageFilterTestPassValuesM0F0 ........................ Passed 0.14 sec Start 2486: itkMorphologicalWatershedImageFilterTestPlateauM0F1 2479/2822 Test #2482: itkMorphologicalWatershedImageFilterTestPlateauM0F0 ........................... Passed 0.14 sec Start 2487: itkMorphologicalWatershedImageFilterTestThickLinesM0F1 2480/2822 Test #2484: itkMorphologicalWatershedImageFilterTestButtonHoleM0F1 ........................ Passed 0.09 sec Start 2488: itkMorphologicalWatershedImageFilterTestButtonHoleM1F0 2481/2822 Test #2485: itkMorphologicalWatershedImageFilterTestPassValuesM0F1 ........................ Passed 0.09 sec Start 2489: itkMorphologicalWatershedImageFilterTestPassValuesM1F0 2482/2822 Test #2486: itkMorphologicalWatershedImageFilterTestPlateauM0F1 ........................... Passed 0.10 sec Start 2490: itkMorphologicalWatershedImageFilterTestPlateauM1F0 2483/2822 Test #2487: itkMorphologicalWatershedImageFilterTestThickLinesM0F1 ........................ Passed 0.08 sec Start 2491: itkMorphologicalWatershedImageFilterTestThickLinesM1F0 2484/2822 Test #2483: itkMorphologicalWatershedImageFilterTestThickLinesM0F0 ........................ Passed 0.18 sec Start 2492: itkMorphologicalWatershedImageFilterTestButtonHoleM1F1 2485/2822 Test #2489: itkMorphologicalWatershedImageFilterTestPassValuesM1F0 ........................ Passed 0.09 sec Start 2493: itkMorphologicalWatershedImageFilterTestPassValuesM1F1 2486/2822 Test #2490: itkMorphologicalWatershedImageFilterTestPlateauM1F0 ........................... Passed 0.08 sec Start 2494: itkMorphologicalWatershedImageFilterTestPlateauM1F1 2487/2822 Test #2492: itkMorphologicalWatershedImageFilterTestButtonHoleM1F1 ........................ Passed 0.07 sec Start 2495: itkMorphologicalWatershedImageFilterTestThickLinesM1F1 2488/2822 Test #2488: itkMorphologicalWatershedImageFilterTestButtonHoleM1F0 ........................ Passed 0.14 sec Start 2496: itkMorphologicalWatershedImageFilterTestLevel00 2489/2822 Test #2491: itkMorphologicalWatershedImageFilterTestThickLinesM1F0 ........................ Passed 0.10 sec Start 2497: itkMorphologicalWatershedImageFilterTestLevel10 2490/2822 Test #2493: itkMorphologicalWatershedImageFilterTestPassValuesM1F1 ........................ Passed 0.07 sec Start 2498: itkMorphologicalWatershedImageFilterTestLevel20 2491/2822 Test #2495: itkMorphologicalWatershedImageFilterTestThickLinesM1F1 ........................ Passed 0.07 sec Start 2499: itkMorphologicalWatershedImageFilterTestLevel30 2492/2822 Test #2497: itkMorphologicalWatershedImageFilterTestLevel10 ............................... Passed 0.06 sec Start 2500: itkMorphologicalWatershedImageFilterTestLevel40 2493/2822 Test #2494: itkMorphologicalWatershedImageFilterTestPlateauM1F1 ........................... Passed 0.12 sec Start 2501: itkMorphologicalWatershedImageFilterTestLevel50 2494/2822 Test #2496: itkMorphologicalWatershedImageFilterTestLevel00 ............................... Passed 0.14 sec Start 2502: NonBlockingPythonFilterCoverage 2495/2822 Test #2498: itkMorphologicalWatershedImageFilterTestLevel20 ............................... Passed 0.14 sec Start 2503: NonBlockingPythonSpatialObjectCoverage 2496/2822 Test #2500: itkMorphologicalWatershedImageFilterTestLevel40 ............................... Passed 0.11 sec Start 2504: NonBlockingPythonCostFunctionCoverage 2497/2822 Test #2501: itkMorphologicalWatershedImageFilterTestLevel50 ............................... Passed 0.09 sec Start 2505: PythonImageIOCoverage 2498/2822 Test #2499: itkMorphologicalWatershedImageFilterTestLevel30 ............................... Passed 0.16 sec Start 2506: PythonOptimizerCoverage 2499/2822 Test #2504: NonBlockingPythonCostFunctionCoverage ......................................... Passed 0.53 sec Start 2507: PythonTransformCoverage 2500/2822 Test #2502: NonBlockingPythonFilterCoverage ............................................... Passed 0.59 sec Start 2508: PythonComplex 2501/2822 Test #2506: PythonOptimizerCoverage ....................................................... Passed 0.53 sec Start 2509: PythonTypemaps 2502/2822 Test #2503: NonBlockingPythonSpatialObjectCoverage ........................................ Passed 0.65 sec Start 2510: PythonTemplate 2503/2822 Test #2505: PythonImageIOCoverage ......................................................... Passed 0.64 sec Start 2511: PythonModifiedTime 2504/2822 Test #2507: PythonTransformCoverage ....................................................... Passed 0.51 sec Start 2512: PythonAutoPipeline 2505/2822 Test #2435: itkTestTransformGetInverse .................................................... Passed 3.77 sec Start 2513: PythonTemplatedPipeline 2506/2822 Test #2508: PythonComplex ................................................................. Passed 2.15 sec Start 2514: PythonModuleToModule 2507/2822 Test #2077: itkBSplineImageRegistrationTest ............................................... Passed 38.53 sec Start 2515: PythonBinaryDilateImageFilter 2508/2822 Test #2509: PythonTypemaps ................................................................ Passed 4.71 sec Start 2516: PythonBinaryErodeImageFilter 2509/2822 Test #2512: PythonAutoPipeline ............................................................ Passed 5.09 sec Start 2517: PythonBinaryThresholdImageFilter 2510/2822 Test #2114: itkDiscreteHessianGaussianImageFunctionTest ................................... Passed 42.39 sec Start 2518: PythonCastImageFilter 2511/2822 Test #2518: PythonCastImageFilter ......................................................... Passed 3.39 sec Start 2519: PythonGrayscaleDilateImageFilter 2512/2822 Test #2511: PythonModifiedTime ............................................................ Passed 34.89 sec Start 2520: PythonBoxGrayscaleDilateImageFilter 2513/2822 Test #2517: PythonBinaryThresholdImageFilter .............................................. Passed 31.88 sec Start 2521: PythonGrayscaleErodeImageFilter 2514/2822 Test #2515: PythonBinaryDilateImageFilter ................................................. Passed 37.11 sec Start 2522: PythonMeanImageFilter 2515/2822 Test #2516: PythonBinaryErodeImageFilter .................................................. Passed 37.54 sec Start 2523: PythonMedianImageFilter 2516/2822 Test #2513: PythonTemplatedPipeline ....................................................... Passed 41.57 sec Start 2524: PythonSigmoidImageFilter 2517/2822 Test #2514: PythonModuleToModule .......................................................... Passed 40.98 sec Start 2525: PythonThresholdImageFilter 2518/2822 Test #2522: PythonMeanImageFilter ......................................................... Passed 4.94 sec Start 2526: PythonResampleImageFilterTest1 2519/2822 Test #2523: PythonMedianImageFilter ....................................................... Passed 5.08 sec Start 2527: PythonResampleImageFilterTest2 2520/2822 Test #2526: PythonResampleImageFilterTest1 ................................................ Passed 8.52 sec Start 2528: PythonResampleImageFilterTest3 2521/2822 Test #2510: PythonTemplate ................................................................ Passed 54.50 sec Start 2529: PythonResampleImageFilterTest4 2522/2822 Test #2527: PythonResampleImageFilterTest2 ................................................ Passed 8.49 sec Start 2530: PythonLazyLoadingImage 2523/2822 Test #2519: PythonGrayscaleDilateImageFilter .............................................. Passed 34.70 sec Start 2531: PythonCurvatureAnisotropicDiffusionImageFilter 2524/2822 Test #2528: PythonResampleImageFilterTest3 ................................................ Passed 8.39 sec Start 2532: PythonCurvatureFlowImageFilter 2525/2822 Test #2529: PythonResampleImageFilterTest4 ................................................ Passed 8.53 sec Start 2533: PythonSmoothingRecursiveGaussianImageFilter 2526/2822 Test #2533: PythonSmoothingRecursiveGaussianImageFilter ................................... Passed 4.94 sec Start 2534: PythonLaplacianImageFilter 2527/2822 Test #2520: PythonBoxGrayscaleDilateImageFilter ........................................... Passed 34.70 sec Start 2535: PythonFFTImageFilter 2528/2822 Test #2521: PythonGrayscaleErodeImageFilter ............................................... Passed 34.70 sec Start 2536: PythonGradientMagnitudeRecursiveGaussianImageFilterTest 2529/2822 Test #2524: PythonSigmoidImageFilter ...................................................... Passed 29.94 sec Start 2537: PythonGradientAnisotropicDiffusionImageFilterTest 2530/2822 Test #2525: PythonThresholdImageFilter .................................................... Passed 32.13 sec Start 2538: PythonGeodesicActiveContourLeftVentricleTest 2531/2822 Test #2532: PythonCurvatureFlowImageFilter ................................................ Passed 31.45 sec Start 2539: PythonFastMarchingLeftVentricleTest 2532/2822 Test #2531: PythonCurvatureAnisotropicDiffusionImageFilter ................................ Passed 32.89 sec Start 2540: PythonFastMarchingRightVentricleTest 2533/2822 Test #2534: PythonLaplacianImageFilter .................................................... Passed 32.52 sec Start 2541: PythonFastMarchingWhiteMatterTest 2534/2822 Test #2535: PythonFFTImageFilter .......................................................... Passed 32.36 sec Start 2542: PythonFastMarchingGrayMatterTest 2535/2822 Test #2536: PythonGradientMagnitudeRecursiveGaussianImageFilterTest ....................... Passed 31.23 sec Start 2543: PythonThresholdSegmentationLevelSetVentricleTest 2536/2822 Test #2537: PythonGradientAnisotropicDiffusionImageFilterTest ............................. Passed 33.16 sec Start 2544: PythonThresholdSegmentationLevelSetWhiteMatterTest 2537/2822 Test #2530: PythonLazyLoadingImage ........................................................ Passed 53.91 sec Start 2545: PythonThresholdSegmentationLevelSetGrayMatterTest 2538/2822 Test #2538: PythonGeodesicActiveContourLeftVentricleTest .................................. Passed 53.26 sec Start 2546: PythonCannyEdgeDetectionImageFilterTest 2539/2822 Test #2539: PythonFastMarchingLeftVentricleTest ........................................... Passed 39.18 sec Start 2547: PythonWatershedSegmentation1 2540/2822 Test #2540: PythonFastMarchingRightVentricleTest .......................................... Passed 39.29 sec Start 2548: PythonSpatialObject 2541/2822 Test #2541: PythonFastMarchingWhiteMatterTest ............................................. Passed 39.35 sec Start 2549: PythonReadDicomAndReadTag 2542/2822 Test #2542: PythonFastMarchingGrayMatterTest .............................................. Passed 38.98 sec Start 2550: PythonAntiAliasBinaryImageFilterTest 2543/2822 Test #2549: PythonReadDicomAndReadTag ..................................................... Passed 2.24 sec Start 2551: PythonSimplePipelineSS2 2544/2822 Test #2551: PythonSimplePipelineSS2 ....................................................... Passed 2.26 sec Start 2552: PythonSimplePipelineUC2 2545/2822 Test #2552: PythonSimplePipelineUC2 ....................................................... Passed 2.27 sec Start 2553: PythonSimplePipelineUL2 2546/2822 Test #2553: PythonSimplePipelineUL2 ....................................................... Passed 2.27 sec Start 2554: PythonSimplePipelineF2 2547/2822 Test #2554: PythonSimplePipelineF2 ........................................................ Passed 2.24 sec Start 2555: PythonSimplePipelineD2 2548/2822 Test #2555: PythonSimplePipelineD2 ........................................................ Passed 2.26 sec Start 2556: PythonSimplePipelineSS3 2549/2822 Test #2556: PythonSimplePipelineSS3 ....................................................... Passed 2.26 sec Start 2557: PythonSimplePipelineUC3 2550/2822 Test #2543: PythonThresholdSegmentationLevelSetVentricleTest .............................. Passed 52.92 sec Start 2558: PythonSimplePipelineUL3 2551/2822 Test #2557: PythonSimplePipelineUC3 ....................................................... Passed 2.34 sec Start 2559: PythonSimplePipelineF3 2552/2822 Test #2558: PythonSimplePipelineUL3 ....................................................... Passed 2.30 sec Start 2560: PythonSimplePipelineD3 2553/2822 Test #2559: PythonSimplePipelineF3 ........................................................ Passed 2.28 sec Start 2561: PythonSimplePipelineSS4 2554/2822 Test #2544: PythonThresholdSegmentationLevelSetWhiteMatterTest ............................ Passed 54.63 sec Start 2562: PythonSimplePipelineUC4 2555/2822 Test #2560: PythonSimplePipelineD3 ........................................................ Passed 2.32 sec Start 2563: PythonSimplePipelineUL4 2556/2822 Test #2546: PythonCannyEdgeDetectionImageFilterTest ....................................... Passed 32.50 sec Start 2564: PythonSimplePipelineF4 2557/2822 Test #2561: PythonSimplePipelineSS4 ....................................................... Passed 2.26 sec Start 2565: PythonSimplePipelineD4 2558/2822 Test #2562: PythonSimplePipelineUC4 ....................................................... Passed 2.31 sec Start 2566: ImageLinearIteratorWithIndexTest 2559/2822 Test #2566: ImageLinearIteratorWithIndexTest .............................................. Passed 0.12 sec Start 2567: ImageRegionIteratorWithIndexTest 2560/2822 Test #2567: ImageRegionIteratorWithIndexTest .............................................. Passed 0.12 sec Start 2568: ImageRegionIteratorTest 2561/2822 Test #2568: ImageRegionIteratorTest ....................................................... Passed 0.11 sec Start 2569: ImageSliceIteratorWithIndexTest 2562/2822 Test #2545: PythonThresholdSegmentationLevelSetGrayMatterTest ............................. Passed 53.39 sec Start 2570: ImageAdaptor2Test 2563/2822 Test #2569: ImageSliceIteratorWithIndexTest ............................................... Passed 0.11 sec Start 2571: ImageAdaptor3Test 2564/2822 Test #2570: ImageAdaptor2Test ............................................................. Passed 0.11 sec Start 2572: ImageAdaptor4Test 2565/2822 Test #2563: PythonSimplePipelineUL4 ....................................................... Passed 2.35 sec Start 2573: ImageAdaptor1Test 2566/2822 Test #2571: ImageAdaptor3Test ............................................................. Passed 0.10 sec Start 2574: Image1Test 2567/2822 Test #2564: PythonSimplePipelineF4 ........................................................ Passed 2.36 sec Start 2575: Image2Test 2568/2822 Test #2572: ImageAdaptor4Test ............................................................. Passed 0.10 sec Start 2576: Image3Test 2569/2822 Test #2574: Image1Test .................................................................... Passed 0.06 sec Start 2577: Image4Test 2570/2822 Test #2573: ImageAdaptor1Test ............................................................. Passed 0.09 sec Start 2578: Image5Test 2571/2822 Test #2576: Image3Test .................................................................... Passed 0.06 sec Start 2579: RGBImageTest 2572/2822 Test #2577: Image4Test .................................................................... Passed 0.06 sec Start 2580: VectorImageTest 2573/2822 Test #2575: Image2Test .................................................................... Passed 0.10 sec Start 2581: AutomaticMeshTest 2574/2822 Test #2578: Image5Test .................................................................... Passed 0.12 sec Start 2582: ImageToPointSetTest 2575/2822 Test #2581: AutomaticMeshTest ............................................................. Passed 0.05 sec Start 2583: Mesh1Test 2576/2822 Test #2579: RGBImageTest .................................................................. Passed 0.10 sec Start 2584: Mesh2Test 2577/2822 Test #2580: VectorImageTest ............................................................... Passed 0.12 sec Start 2585: Mesh3Test 2578/2822 Test #2583: Mesh1Test ..................................................................... Passed 0.05 sec Start 2586: MeshCellsIterationTest 2579/2822 Test #2584: Mesh2Test ..................................................................... Passed 0.05 sec Start 2587: MeshCellVisitorTest 2580/2822 Test #2585: Mesh3Test ..................................................................... Passed 0.05 sec Start 2588: MeshCellVisitor2Test 2581/2822 Test #2582: ImageToPointSetTest ........................................................... Passed 0.11 sec Start 2589: MeshKComplexTest 2582/2822 Test #2586: MeshCellsIterationTest ........................................................ Passed 0.05 sec Start 2590: MeshPolyLineTest 2583/2822 Test #2587: MeshCellVisitorTest ........................................................... Passed 0.04 sec Start 2591: MeshTraitsTest 2584/2822 Test #2589: MeshKComplexTest .............................................................. Passed 0.05 sec Start 2592: PointSet1Test 2585/2822 Test #2588: MeshCellVisitor2Test .......................................................... Passed 0.06 sec Start 2593: PointSet2Test 2586/2822 Test #2590: MeshPolyLineTest .............................................................. Passed 0.05 sec Start 2594: PointSet3Test 2587/2822 Test #2591: MeshTraitsTest ................................................................ Passed 0.05 sec Start 2595: PointSetWithCovariantVectorsTest 2588/2822 Test #2592: PointSet1Test ................................................................. Passed 0.05 sec Start 2596: PointSetWithVectorsTest 2589/2822 Test #2593: PointSet2Test ................................................................. Passed 0.05 sec Start 2597: RGBPointSetTest 2590/2822 Test #2594: PointSet3Test ................................................................. Passed 0.05 sec Start 2598: PolyLineParametricPath1 2591/2822 Test #2595: PointSetWithCovariantVectorsTest .............................................. Passed 0.05 sec Start 2599: BilateralImageFilterTest 2592/2822 Test #2596: PointSetWithVectorsTest ....................................................... Passed 0.05 sec Start 2600: BinaryMinMaxCurvatureFlowImageFilterTest 2593/2822 Test #2597: RGBPointSetTest ............................................................... Passed 0.05 sec Start 2601: BinaryThresholdImageFilterTest 2594/2822 Test #2598: PolyLineParametricPath1 ....................................................... Passed 0.05 sec Start 2602: BinaryMedianImageFilterTest1 2595/2822 Test #2601: BinaryThresholdImageFilterTest ................................................ Passed 0.10 sec Start 2603: BinaryMedianImageFilterTest2 2596/2822 Test #2602: BinaryMedianImageFilterTest1 .................................................. Passed 0.12 sec Start 2604: BinaryMedianImageFilterTest3 2597/2822 Test #2604: BinaryMedianImageFilterTest3 .................................................. Passed 0.15 sec Start 2605: VotingBinaryHoleFillingImageFilterTest1 2598/2822 Test #2603: BinaryMedianImageFilterTest2 .................................................. Passed 0.20 sec Start 2606: VotingBinaryHoleFillingImageFilterTest2 2599/2822 Test #2600: BinaryMinMaxCurvatureFlowImageFilterTest ...................................... Passed 0.37 sec Start 2607: VotingBinaryHoleFillingImageFilterTest3 2600/2822 Test #2599: BilateralImageFilterTest ...................................................... Passed 0.41 sec Start 2608: VotingBinaryIterativeHoleFillingImageFilterTest1 2601/2822 Test #2605: VotingBinaryHoleFillingImageFilterTest1 ....................................... Passed 0.14 sec Start 2609: VotingBinaryIterativeHoleFillingImageFilterTest2 2602/2822 Test #2606: VotingBinaryHoleFillingImageFilterTest2 ....................................... Passed 0.13 sec Start 2610: VotingBinaryIterativeHoleFillingImageFilterTest3 2603/2822 Test #2607: VotingBinaryHoleFillingImageFilterTest3 ....................................... Passed 0.12 sec Start 2611: BinomialBlurImageFilterTest 2604/2822 Test #2608: VotingBinaryIterativeHoleFillingImageFilterTest1 .............................. Passed 0.12 sec Start 2612: CompositeFilterExampleTest 2605/2822 Test #2610: VotingBinaryIterativeHoleFillingImageFilterTest3 .............................. Passed 0.19 sec Start 2613: CurvatureAnisotropicDiffusionImageFilterTest 2606/2822 Test #2612: CompositeFilterExampleTest .................................................... Passed 0.12 sec Start 2614: CurvatureFlowImageFilterTest 2607/2822 Test #2609: VotingBinaryIterativeHoleFillingImageFilterTest2 .............................. Passed 0.20 sec Start 2615: DanielssonDistanceMapImageFilterTest 2608/2822 Test #2611: BinomialBlurImageFilterTest ................................................... Passed 0.15 sec Start 2616: DiscreteGaussianImageFilterTest 2609/2822 Test #2548: PythonSpatialObject ........................................................... Passed 29.69 sec Start 2617: GradientAnisotropicDiffusionImageFilterTest 2610/2822 Test #2616: DiscreteGaussianImageFilterTest ............................................... Passed 0.13 sec Start 2618: GradientMagnitudeImageFilterTest 2611/2822 Test #2614: CurvatureFlowImageFilterTest .................................................. Passed 0.15 sec Start 2619: GradientMagnitudeRecursiveGaussianImageFilterTest 2612/2822 Test #2613: CurvatureAnisotropicDiffusionImageFilterTest .................................. Passed 0.23 sec Start 2621: GradientVectorFlowImageFilterTest 2613/2822 Test #2615: DanielssonDistanceMapImageFilterTest .......................................... Passed 0.25 sec Start 2622: DerivativeImageFilterTest 2614/2822 Test #2618: GradientMagnitudeImageFilterTest .............................................. Passed 0.12 sec Start 2623: LaplacianImageFilterTest 2615/2822 Test #2619: GradientMagnitudeRecursiveGaussianImageFilterTest ............................. Passed 0.12 sec Start 2624: LaplacianSharpeningImageFilterTest 2616/2822 Test #2617: GradientAnisotropicDiffusionImageFilterTest ................................... Passed 0.19 sec Start 2625: MathematicalMorphologyBinaryFiltersTest 2617/2822 Test #2622: DerivativeImageFilterTest ..................................................... Passed 0.13 sec Start 2626: MathematicalMorphologyGrayscaleFiltersTest 2618/2822 Test #2624: LaplacianSharpeningImageFilterTest ............................................ Passed 0.12 sec Start 2627: MeanImageFilterTest 2619/2822 Test #2623: LaplacianImageFilterTest ...................................................... Passed 0.14 sec Start 2628: MedianImageFilterTest 2620/2822 Test #2625: MathematicalMorphologyBinaryFiltersTest ....................................... Passed 0.14 sec Start 2629: ResampleImageFilterTest1 2621/2822 Test #2626: MathematicalMorphologyGrayscaleFiltersTest .................................... Passed 0.13 sec Start 2630: ResampleOrientedImageFilterTest 2622/2822 Test #2565: PythonSimplePipelineD4 ........................................................ Passed 2.29 sec Start 2631: ResampleImageFilterTest2 2623/2822 Test #2628: MedianImageFilterTest ......................................................... Passed 0.13 sec Start 2632: ResampleImageFilterTest3 2624/2822 Test #2627: MeanImageFilterTest ........................................................... Passed 0.14 sec Start 2633: ResampleImageFilterTest4 2625/2822 Test #2629: ResampleImageFilterTest1 ...................................................... Passed 0.16 sec Start 2634: ResampleImageFilter2Test1 2626/2822 Test #2630: ResampleOrientedImageFilterTest ............................................... Passed 0.14 sec Start 2635: ResampleImageFilter2Test2 2627/2822 Test #2631: ResampleImageFilterTest2 ...................................................... Passed 0.14 sec Start 2636: ResampleImageFilter2Test3 2628/2822 Test #2633: ResampleImageFilterTest4 ...................................................... Passed 0.13 sec Start 2637: ResampleImageFilter2Test4 2629/2822 Test #2632: ResampleImageFilterTest3 ...................................................... Passed 0.17 sec Start 2638: ResampleImageFilter2Test5 2630/2822 Test #2634: ResampleImageFilter2Test1 ..................................................... Passed 0.12 sec Start 2639: ResampleImageFilter3Test1 2631/2822 Test #2636: ResampleImageFilter2Test3 ..................................................... Passed 0.11 sec Start 2640: ResampleImageFilter4Test 2632/2822 Test #2635: ResampleImageFilter2Test2 ..................................................... Passed 0.14 sec Start 2641: ResampleImageFilter5Test 2633/2822 Test #2637: ResampleImageFilter2Test4 ..................................................... Passed 0.11 sec Start 2642: ResampleImageFilter8Test 2634/2822 Test #2621: GradientVectorFlowImageFilterTest ............................................. Passed 0.58 sec Start 2643: ResampleImageFilter9Test 2635/2822 Test #2638: ResampleImageFilter2Test5 ..................................................... Passed 0.12 sec Start 2644: SigmoidImageFilterTest 2636/2822 Test #2639: ResampleImageFilter3Test1 ..................................................... Passed 0.12 sec Start 2645: SmoothingRecursiveGaussianImageFilterTest 2637/2822 Test #2640: ResampleImageFilter4Test ...................................................... Passed 0.11 sec Start 2646: SmoothingRecursiveGaussianImageFilter2Test 2638/2822 Test #2641: ResampleImageFilter5Test ...................................................... Passed 0.12 sec Start 2647: ThresholdAboveBelowOutsideImageFilterTest 2639/2822 Test #2642: ResampleImageFilter8Test ...................................................... Passed 0.17 sec Start 2648: VectorGradientAnisotropicDiffusionImageFilterTest 2640/2822 Test #2644: SigmoidImageFilterTest ........................................................ Passed 0.17 sec Start 2649: VectorCurvatureAnisotropicDiffusionImageFilterTest 2641/2822 Test #2646: SmoothingRecursiveGaussianImageFilter2Test .................................... Passed 0.13 sec Start 2650: VectorIndexSelectionTest 2642/2822 Test #2643: ResampleImageFilter9Test ...................................................... Passed 0.21 sec Start 2651: ZeroCrossingBasedEdgeDetectionImageFilterTest 2643/2822 Test #2645: SmoothingRecursiveGaussianImageFilterTest ..................................... Passed 0.17 sec Start 2652: RGBGradientAnisotropicDiffusionImageFilterTest 2644/2822 Test #2647: ThresholdAboveBelowOutsideImageFilterTest ..................................... Passed 0.14 sec Start 2653: RGBCurvatureAnisotropicDiffusionImageFilterTest 2645/2822 Test #2648: VectorGradientAnisotropicDiffusionImageFilterTest ............................. Passed 0.14 sec Start 2654: MorphologicalImageEnhancementTest 2646/2822 Test #2650: VectorIndexSelectionTest ...................................................... Passed 0.12 sec Start 2655: OtsuThresholdImageFilterTest 2647/2822 Test #2649: VectorCurvatureAnisotropicDiffusionImageFilterTest ............................ Passed 0.13 sec Start 2656: OtsuMultipleThresholdImageFilterTest 2648/2822 Test #2652: RGBGradientAnisotropicDiffusionImageFilterTest ................................ Passed 0.11 sec Start 2657: DigitallyReconstructedRadiograph1Test 2649/2822 Test #2651: ZeroCrossingBasedEdgeDetectionImageFilterTest ................................. Passed 0.14 sec Start 2658: AntiAliasBinaryImageFilterTest 2650/2822 Test #2653: RGBCurvatureAnisotropicDiffusionImageFilterTest ............................... Passed 0.11 sec Start 2659: CannyEdgeDetectionImageFilterTest 2651/2822 Test #2655: OtsuThresholdImageFilterTest .................................................. Passed 0.13 sec Start 2660: CannyEdgeDetectionImageFilterTest2 2652/2822 Test #2656: OtsuMultipleThresholdImageFilterTest .......................................... Passed 0.16 sec Start 2661: FlipImageFilterTest1 2653/2822 Test #2658: AntiAliasBinaryImageFilterTest ................................................ Passed 0.19 sec Start 2662: FlipImageFilterTest2 2654/2822 Test #2659: CannyEdgeDetectionImageFilterTest ............................................. Passed 0.20 sec Start 2663: FlipImageFilterTest3 2655/2822 Test #2654: MorphologicalImageEnhancementTest ............................................. Passed 0.27 sec Start 2664: GaussianBlurImageFunctionTest 2656/2822 Test #2657: DigitallyReconstructedRadiograph1Test ......................................... Passed 0.24 sec Start 2665: FFTImageFilterTest 2657/2822 Test #2661: FlipImageFilterTest1 .......................................................... Passed 0.12 sec Start 2666: FFTDirectInverseTest 2658/2822 Test #2662: FlipImageFilterTest2 .......................................................... Passed 0.10 sec Start 2667: FFTDirectInverse2Test 2659/2822 Test #2660: CannyEdgeDetectionImageFilterTest2 ............................................ Passed 0.20 sec Start 2668: FFTImageFilterTest2 2660/2822 Test #2663: FlipImageFilterTest3 .......................................................... Passed 0.10 sec Start 2669: FFTImageFilterTest3 2661/2822 Test #2665: FFTImageFilterTest ............................................................ Passed 0.13 sec Start 2670: RGBToGrayscaleTest 2662/2822 Test #2666: FFTDirectInverseTest .......................................................... Passed 0.13 sec Start 2671: LaplacianRecursiveGaussianImageFilter1Test 2663/2822 Test #2667: FFTDirectInverse2Test ......................................................... Passed 0.12 sec Start 2672: LaplacianRecursiveGaussianImageFilter2Test 2664/2822 Test #2669: FFTImageFilterTest3 ........................................................... Passed 0.12 sec Start 2673: ResampleImageFilter6Test 2665/2822 Test #2668: FFTImageFilterTest2 ........................................................... Passed 0.13 sec Start 2674: ResampleImageFilter7Test 2666/2822 Test #2670: RGBToGrayscaleTest ............................................................ Passed 0.11 sec Start 2675: ResampleVolumesToBeIsotropicTest 2667/2822 Test #2671: LaplacianRecursiveGaussianImageFilter1Test .................................... Passed 0.10 sec Start 2676: ScaleSpaceGenerator2DTest 2668/2822 Test #2672: LaplacianRecursiveGaussianImageFilter2Test .................................... Passed 0.12 sec Start 2677: SubsampleVolumeTest 2669/2822 Test #2674: ResampleImageFilter7Test ...................................................... Passed 0.12 sec Start 2678: SpatialObjectToImage1 2670/2822 Test #2673: ResampleImageFilter6Test ...................................................... Passed 0.14 sec Start 2679: SpatialObjectToImage2 2671/2822 Test #2675: ResampleVolumesToBeIsotropicTest .............................................. Passed 0.12 sec Start 2680: SpatialObjectToImage3 2672/2822 Test #2677: SubsampleVolumeTest ........................................................... Passed 0.12 sec Start 2681: DiffusionTensor3DReconstructionImageFilterTest 2673/2822 Test #2664: GaussianBlurImageFunctionTest ................................................. Passed 0.45 sec Start 2682: DicomSliceReadPythonTest 2674/2822 Test #2680: SpatialObjectToImage3 ......................................................... Passed 0.10 sec Start 2683: ExampleIOPluginTest 2675/2822 Test #2676: ScaleSpaceGenerator2DTest ..................................................... Passed 0.28 sec Start 2684: ExampleIOPluginTest2 2676/2822 Test #2683: ExampleIOPluginTest ........................................................... Passed 0.10 sec Start 2685: ImageIOFactoryRegisterTest 2677/2822 Test #2685: ImageIOFactoryRegisterTest .................................................... Passed 0.09 sec Start 2686: TransformReadWriteTest 2678/2822 Test #2684: ExampleIOPluginTest2 .......................................................... Passed 0.11 sec Start 2687: ConfidenceConnectedWhiteTest 2679/2822 Test #2686: TransformReadWriteTest ........................................................ Passed 0.03 sec Start 2688: ConfidenceConnectedVentricleTest 2680/2822 Test #2678: SpatialObjectToImage1 ......................................................... Passed 0.40 sec Start 2689: ConfidenceConnectedGrayTest 2681/2822 Test #2688: ConfidenceConnectedVentricleTest .............................................. Passed 0.14 sec Start 2690: ConnectedThresholdWhiteTest 2682/2822 Test #2687: ConfidenceConnectedWhiteTest .................................................. Passed 0.17 sec Start 2691: ConnectedThresholdVentricleTest 2683/2822 Test #2689: ConfidenceConnectedGrayTest ................................................... Passed 0.19 sec Start 2692: ConnectedThresholdGrayTest 2684/2822 Test #2690: ConnectedThresholdWhiteTest ................................................... Passed 0.15 sec Start 2693: FastMarchingLeftVentricleTest 2685/2822 Test #2691: ConnectedThresholdVentricleTest ............................................... Passed 0.18 sec Start 2694: FastMarchingRightVentricleTest 2686/2822 Test #2692: ConnectedThresholdGrayTest .................................................... Passed 0.16 sec Start 2695: FastMarchingWhiteMatterTest 2687/2822 Test #2693: FastMarchingLeftVentricleTest ................................................. Passed 0.26 sec Start 2696: FastMarchingGrayMatterTest 2688/2822 Test #2694: FastMarchingRightVentricleTest ................................................ Passed 0.29 sec Start 2697: GeodesicActiveContourLeftVentricleTest 2689/2822 Test #2695: FastMarchingWhiteMatterTest ................................................... Passed 0.29 sec Start 2698: GeodesicActiveContourRightVentricleTest 2690/2822 Test #2696: FastMarchingGrayMatterTest .................................................... Passed 0.27 sec Start 2699: GeodesicActiveContourWhiteMatterTest 2691/2822 Test #2697: GeodesicActiveContourLeftVentricleTest ........................................ Passed 0.33 sec Start 2700: GeodesicActiveContourGrayMatterTest 2692/2822 Test #2698: GeodesicActiveContourRightVentricleTest ....................................... Passed 0.33 sec Start 2701: ShapeDetectionLevelSetLeftVentricleTest 2693/2822 Test #2700: GeodesicActiveContourGrayMatterTest ........................................... Passed 0.33 sec Start 2702: ShapeDetectionLevelSetRightVentricleTest 2694/2822 Test #2701: ShapeDetectionLevelSetLeftVentricleTest ....................................... Passed 0.29 sec Start 2703: ShapeDetectionLevelSetWhiteMatterTest 2695/2822 Test #2681: DiffusionTensor3DReconstructionImageFilterTest ................................ Passed 1.57 sec Start 2704: ShapeDetectionLevelSetGrayMatterTest 2696/2822 Test #2699: GeodesicActiveContourWhiteMatterTest .......................................... Passed 0.53 sec Start 2705: ThresholdSegmentationLevelSetVentricleTest 2697/2822 Test #2705: ThresholdSegmentationLevelSetVentricleTest .................................... Passed 0.18 sec Start 2706: ThresholdSegmentationLevelSetWhiteMatterTest 2698/2822 Test #2702: ShapeDetectionLevelSetRightVentricleTest ...................................... Passed 0.31 sec Start 2707: ThresholdSegmentationLevelSetGrayMatterTest 2699/2822 Test #2704: ShapeDetectionLevelSetGrayMatterTest .......................................... Passed 0.29 sec Start 2708: CellularSegmentation1Test 2700/2822 Test #2707: ThresholdSegmentationLevelSetGrayMatterTest ................................... Passed 0.22 sec Start 2709: VectorConfidenceConnectedTest1 2701/2822 Test #2703: ShapeDetectionLevelSetWhiteMatterTest ......................................... Passed 0.57 sec Start 2710: VectorConfidenceConnectedTest2 2702/2822 Test #2709: VectorConfidenceConnectedTest1 ................................................ Passed 0.09 sec Start 2711: VectorConfidenceConnectedTest3 2703/2822 Test #2710: VectorConfidenceConnectedTest2 ................................................ Passed 0.11 sec Start 2712: CannySegmentationLevelSetImageFilterTest 2704/2822 Test #2711: VectorConfidenceConnectedTest3 ................................................ Passed 0.11 sec Start 2713: GeodesicActiveContourShapePriorCallosumTest 2705/2822 Test #2712: CannySegmentationLevelSetImageFilterTest ...................................... Passed 0.29 sec Start 2714: NeighborhoodConnectedWhiteTest 2706/2822 Test #2714: NeighborhoodConnectedWhiteTest ................................................ Passed 0.16 sec Start 2715: NeighborhoodConnectedVentricleTest 2707/2822 Test #2706: ThresholdSegmentationLevelSetWhiteMatterTest .................................. Passed 1.01 sec Start 2716: NeighborhoodConnectedGrayTest 2708/2822 Test #2715: NeighborhoodConnectedVentricleTest ............................................ Passed 0.15 sec Start 2717: IsolatedConnectedTest 2709/2822 Test #2716: NeighborhoodConnectedGrayTest ................................................. Passed 0.18 sec Start 2718: RelabelComponentImageFilterTest 2710/2822 Test #2718: RelabelComponentImageFilterTest ............................................... Passed 0.10 sec Start 2719: WatershedSegmentation1Test1 2711/2822 Test #2717: IsolatedConnectedTest ......................................................... Passed 0.28 sec Start 2720: WatershedSegmentation1Test2 2712/2822 Test #2719: WatershedSegmentation1Test1 ................................................... Passed 0.47 sec Start 2721: CurvesLevelSetImageFilterTest 2713/2822 Test #2720: WatershedSegmentation1Test2 ................................................... Passed 0.52 sec Start 2722: HoughTransformTwo2DLinesTest 2714/2822 Test #2708: CellularSegmentation1Test ..................................................... Passed 1.93 sec Start 2723: HoughTransformTwo2DCirclesTest 2715/2822 Test #2722: HoughTransformTwo2DLinesTest .................................................. Passed 0.23 sec Start 2724: LaplacianSegmentationLevelSetImageFilterTest 2716/2822 Test #2721: CurvesLevelSetImageFilterTest ................................................. Passed 0.37 sec Start 2725: ScalarImageKmeansClassifierTest 2717/2822 Test #2723: HoughTransformTwo2DCirclesTest ................................................ Passed 0.16 sec Start 2726: ScalarImageMarkovRandomField1Test 2718/2822 Test #2725: ScalarImageKmeansClassifierTest ............................................... Passed 0.25 sec Start 2727: BayesianPluginClassifierTest 2719/2822 Test #2727: BayesianPluginClassifierTest .................................................. Passed 0.05 sec Start 2728: BayesianClassifierInitializerTest 2720/2822 Test #2724: LaplacianSegmentationLevelSetImageFilterTest .................................. Passed 0.36 sec Start 2729: BayesianClassifierTest 2721/2822 Test #2726: ScalarImageMarkovRandomField1Test ............................................. Passed 0.28 sec Start 2730: EuclideanDistanceTest 2722/2822 Test #2730: EuclideanDistanceTest ......................................................... Passed 0.05 sec Start 2731: GaussianDensityFunctionTest 2723/2822 Test #2731: GaussianDensityFunctionTest ................................................... Passed 0.05 sec Start 2732: MinimumDecisionRuleTest 2724/2822 Test #2732: MinimumDecisionRuleTest ....................................................... Passed 0.05 sec Start 2733: MaximumDecisionRuleTest 2725/2822 Test #2733: MaximumDecisionRuleTest ....................................................... Passed 0.06 sec Start 2734: MaximumRatioDecisionRuleTest 2726/2822 Test #2728: BayesianClassifierInitializerTest ............................................. Passed 0.25 sec Start 2735: KdTreeTest 2727/2822 Test #2734: MaximumRatioDecisionRuleTest .................................................. Passed 0.05 sec Start 2736: ImageRegistrationHistogramPlotterTest 2728/2822 Test #2735: KdTreeTest .................................................................... Passed 0.05 sec Start 2737: ImageRegistration1Test1 2729/2822 Test #2729: BayesianClassifierTest ........................................................ Passed 0.32 sec Start 2738: ImageRegistration1Test2 2730/2822 Test #2713: GeodesicActiveContourShapePriorCallosumTest ................................... Passed 2.42 sec Start 2739: ImageRegistration2Test 2731/2822 Test #2737: ImageRegistration1Test1 ....................................................... Passed 1.03 sec Start 2740: ImageRegistration3Test 2732/2822 Test #2738: ImageRegistration1Test2 ....................................................... Passed 1.69 sec Start 2741: ImageRegistration4Test 2733/2822 Test #2740: ImageRegistration3Test ........................................................ Passed 0.85 sec Start 2742: ImageRegistration4Test2 2734/2822 Test #2742: ImageRegistration4Test2 ....................................................... Passed 0.21 sec Start 2743: ImageRegistration5Test1 2735/2822 Test #2547: PythonWatershedSegmentation1 .................................................. Passed 39.71 sec Start 2744: ImageRegistration5Test2 2736/2822 Test #2741: ImageRegistration4Test ........................................................ Passed 0.81 sec Start 2745: ImageRegistration6Test 2737/2822 Test #2743: ImageRegistration5Test1 ....................................................... Passed 0.69 sec Start 2746: ImageRegistration7Test 2738/2822 Test #2745: ImageRegistration6Test ........................................................ Passed 0.90 sec Start 2747: ImageRegistration9Test 2739/2822 Test #2744: ImageRegistration5Test2 ....................................................... Passed 1.27 sec Start 2748: ImageRegistration10Test 2740/2822 Test #2748: ImageRegistration10Test ....................................................... Passed 0.43 sec Start 2749: ImageRegistration13Test 2741/2822 Test #2746: ImageRegistration7Test ........................................................ Passed 2.03 sec Start 2750: ImageRegistration14Test 2742/2822 Test #2747: ImageRegistration9Test ........................................................ Passed 3.12 sec Start 2751: ImageRegistration15Test 2743/2822 Test #2749: ImageRegistration13Test ....................................................... Passed 2.77 sec Start 2752: ImageRegistration16Test 2744/2822 Test #2752: ImageRegistration16Test ....................................................... Passed 0.38 sec Start 2753: ImageRegistration16Test2 2745/2822 Test #2753: ImageRegistration16Test2 ...................................................... Passed 0.41 sec Start 2754: ImageRegistration17Test 2746/2822 Test #2679: SpatialObjectToImage2 ......................................................... Passed 12.63 sec Start 2755: ImageRegistration18Test 2747/2822 Test #2754: ImageRegistration17Test ....................................................... Passed 0.88 sec Start 2756: ImageRegistration19Test 2748/2822 Test #2756: ImageRegistration19Test ....................................................... Passed 0.45 sec Start 2757: MultiResImageRegistration1Test 2749/2822 Test #2757: MultiResImageRegistration1Test ................................................ Passed 0.54 sec Start 2758: MultiResImageRegistration1Test2 2750/2822 Test #2758: MultiResImageRegistration1Test2 ............................................... Passed 0.44 sec Start 2759: MultiResImageRegistration2Test 2751/2822 Test #2755: ImageRegistration18Test ....................................................... Passed 3.54 sec Start 2760: MultiResImageRegistration2Test2 2752/2822 Test #2736: ImageRegistrationHistogramPlotterTest ......................................... Passed 12.41 sec Start 2761: MultiStageImageRegistration1Test 2753/2822 Test #2750: ImageRegistration14Test ....................................................... Passed 8.82 sec Start 2762: MultiStageImageRegistration2Test 2754/2822 Test #2759: MultiResImageRegistration2Test ................................................ Passed 4.74 sec Start 2763: DeformableRegistration2Test 2755/2822 Test #2763: DeformableRegistration2Test ................................................... Passed 1.59 sec Start 2764: DeformableRegistration3Test 2756/2822 Test #2751: ImageRegistration15Test ....................................................... Passed 11.55 sec Start 2765: DeformableRegistration4Test 2757/2822 Test #2739: ImageRegistration2Test ........................................................ Passed 18.05 sec Start 2766: DeformableRegistration5Test 2758/2822 Test #2764: DeformableRegistration3Test ................................................... Passed 2.22 sec Start 2767: DeformableRegistration6Test 2759/2822 Test #2760: MultiResImageRegistration2Test2 ............................................... Passed 7.33 sec Start 2768: BSplineWarping1Test 2760/2822 Test #2768: BSplineWarping1Test ........................................................... Passed 0.27 sec Start 2769: DeformableRegistration12Test 2761/2822 Test #2766: DeformableRegistration5Test ................................................... Passed 1.95 sec Start 2770: DeformableRegistration13Test1 2762/2822 Test #2765: DeformableRegistration4Test ................................................... Passed 5.42 sec Start 2771: DeformableRegistration13Test2 2763/2822 Test #2762: MultiStageImageRegistration2Test .............................................. Passed 12.12 sec Start 2772: DeformableRegistration13Test3 2764/2822 Test #2769: DeformableRegistration12Test .................................................. Passed 7.79 sec Start 2773: DeformableRegistration13Test4 2765/2822 Test #2550: PythonAntiAliasBinaryImageFilterTest .......................................... Passed 56.72 sec Start 2774: LandmarkWarping2Test 2766/2822 Test #2774: LandmarkWarping2Test .......................................................... Passed 0.28 sec Start 2775: ImageRegistration12Test 2767/2822 Test #2682: DicomSliceReadPythonTest ...................................................... Passed 32.86 sec Start 2776: ModelToImageRegistration2Test 2768/2822 Test #2775: ImageRegistration12Test ....................................................... Passed 1.23 sec Start 2777: ITKv3ImageRegistration1Test 2769/2822 Test #2776: ModelToImageRegistration2Test ................................................. Passed 0.38 sec Start 2778: ITKv3ImageRegistration2Test 2770/2822 Test #2777: ITKv3ImageRegistration1Test ................................................... Passed 0.71 sec Start 2779: ITKv3ImageRegistration3Test 2771/2822 Test #2779: ITKv3ImageRegistration3Test ................................................... Passed 0.64 sec Start 2780: ITKv3ImageRegistration4Test 2772/2822 Test #2780: ITKv3ImageRegistration4Test ................................................... Passed 1.51 sec Start 2781: ITKv3ImageRegistration4Test2 2773/2822 Test #2773: DeformableRegistration13Test4 ................................................. Passed 6.61 sec Start 2782: ITKv3ImageRegistration4Test3 2774/2822 Test #2781: ITKv3ImageRegistration4Test2 .................................................. Passed 2.43 sec Start 2783: ITKv3ImageRegistration5Test1 2775/2822 Test #2782: ITKv3ImageRegistration4Test3 .................................................. Passed 0.32 sec Start 2784: ITKv3ImageRegistration5Test2 2776/2822 Test #2771: DeformableRegistration13Test2 ................................................. Passed 10.44 sec Start 2785: ITKv3ImageRegistration6Test 2777/2822 Test #2783: ITKv3ImageRegistration5Test1 .................................................. Passed 0.69 sec Start 2786: ITKv3ImageRegistration7Test 2778/2822 Test #2785: ITKv3ImageRegistration6Test ................................................... Passed 0.82 sec Start 2787: ITKv3ImageRegistration9Test 2779/2822 Test #2770: DeformableRegistration13Test1 ................................................. Passed 16.27 sec Start 2788: ITKv3ImageRegistration10Test 2780/2822 Test #2772: DeformableRegistration13Test3 ................................................. Passed 11.11 sec Start 2789: ITKv3ImageRegistration13Test 2781/2822 Test #2786: ITKv3ImageRegistration7Test ................................................... Passed 2.32 sec Start 2790: ITKv3ImageRegistration13Test2 2782/2822 Test #2761: MultiStageImageRegistration1Test .............................................. Passed 24.66 sec Start 2791: ITKv3ImageRegistration13Test3 2783/2822 Test #2788: ITKv3ImageRegistration10Test .................................................. Passed 0.60 sec Start 2792: ITKv3ImageRegistration13Test4 2784/2822 Test #2767: DeformableRegistration6Test ................................................... Passed 18.77 sec Start 2793: ITKv3ImageRegistration13Test5 2785/2822 Test #2787: ITKv3ImageRegistration9Test ................................................... Passed 2.85 sec Start 2794: ITKv3ImageRegistration14Test 2786/2822 Test #2789: ITKv3ImageRegistration13Test .................................................. Passed 1.02 sec Start 2795: ITKv3ImageRegistration15Test 2787/2822 Test #2784: ITKv3ImageRegistration5Test2 .................................................. Passed 4.07 sec Start 2796: ITKv3ImageRegistration16Test 2788/2822 Test #2792: ITKv3ImageRegistration13Test4 ................................................. Passed 0.94 sec Start 2797: ITKv3ImageRegistration16Test2 2789/2822 Test #2793: ITKv3ImageRegistration13Test5 ................................................. Passed 0.83 sec Start 2798: ITKv3ImageRegistration17Test 2790/2822 Test #2797: ITKv3ImageRegistration16Test2 ................................................. Passed 0.31 sec Start 2799: ITKv3ImageRegistration18Test 2791/2822 Test #2796: ITKv3ImageRegistration16Test .................................................. Passed 0.38 sec Start 2800: ITKv3ImageRegistration19Test 2792/2822 Test #2790: ITKv3ImageRegistration13Test2 ................................................. Passed 1.66 sec Start 2801: ITKv3MultiResImageRegistration1Test 2793/2822 Test #2791: ITKv3ImageRegistration13Test3 ................................................. Passed 1.67 sec Start 2802: ITKv3MultiResImageRegistration1Test2 2794/2822 Test #2800: ITKv3ImageRegistration19Test .................................................. Passed 0.42 sec Start 2803: ITKv3MultiResImageRegistration2Test 2795/2822 Test #2798: ITKv3ImageRegistration17Test .................................................. Passed 0.96 sec Start 2804: ITKv3MultiResImageRegistration2Test2 2796/2822 Test #2799: ITKv3ImageRegistration18Test .................................................. Passed 3.58 sec Start 2805: ITKv3DeformableRegistration2Test 2797/2822 Test #2803: ITKv3MultiResImageRegistration2Test ........................................... Passed 4.87 sec Start 2806: ITKv3DeformableRegistration3Test 2798/2822 Test #2805: ITKv3DeformableRegistration2Test .............................................. Passed 1.96 sec Start 2807: ITKv3DeformableRegistration5Test 2799/2822 Test #2807: ITKv3DeformableRegistration5Test .............................................. Passed 1.58 sec Start 2808: ITKv3BSplineWarping1Test 2800/2822 Test #2808: ITKv3BSplineWarping1Test ...................................................... Passed 0.23 sec Start 2809: ITKv3DeformableRegistration12Test1 2801/2822 Test #2806: ITKv3DeformableRegistration3Test .............................................. Passed 2.79 sec Start 2810: ITKv3DeformableRegistration12Test2 2802/2822 Test #2801: ITKv3MultiResImageRegistration1Test ........................................... Passed 8.07 sec Start 2811: ITKv3DeformableRegistration12Test3 2803/2822 Test #2804: ITKv3MultiResImageRegistration2Test2 .......................................... Passed 7.80 sec Start 2812: ITKv3DeformableRegistration12Test4 2804/2822 Test #2794: ITKv3ImageRegistration14Test .................................................. Passed 10.27 sec Start 2813: ITKv3DeformableRegistration13Test1 2805/2822 Test #2812: ITKv3DeformableRegistration12Test4 ............................................ Passed 5.04 sec Start 2814: ITKv3DeformableRegistration13Test2 2806/2822 Test #2778: ITKv3ImageRegistration2Test ................................................... Passed 23.57 sec Start 2815: ITKv3DeformableRegistration13Test3 2807/2822 Test #2795: ITKv3ImageRegistration15Test .................................................. Passed 14.48 sec Start 2816: ITKv3DeformableRegistration13Test4 2808/2822 Test #2811: ITKv3DeformableRegistration12Test3 ............................................ Passed 6.32 sec Start 2817: LandmarkWarping2Test 2809/2822 Test #2817: LandmarkWarping2Test .......................................................... Passed 0.19 sec Start 2818: ITKv3ImageRegistration12Test 2810/2822 Test #2818: ITKv3ImageRegistration12Test .................................................. Passed 0.86 sec Start 2819: ITKv3ModelToImageRegistration2Test 2811/2822 Test #2810: ITKv3DeformableRegistration12Test2 ............................................ Passed 7.89 sec Start 2820: IterativeClosestPoint1Test 2812/2822 Test #2819: ITKv3ModelToImageRegistration2Test ............................................ Passed 0.39 sec Start 2821: IterativeClosestPoint2Test 2813/2822 Test #2820: IterativeClosestPoint1Test .................................................... Passed 0.08 sec Start 2822: IterativeClosestPoint3Test 2814/2822 Test #2822: IterativeClosestPoint3Test .................................................... Passed 0.12 sec 2815/2822 Test #2809: ITKv3DeformableRegistration12Test1 ............................................ Passed 9.27 sec 2816/2822 Test #2821: IterativeClosestPoint2Test .................................................... Passed 1.45 sec 2817/2822 Test #2802: ITKv3MultiResImageRegistration1Test2 .......................................... Passed 18.19 sec 2818/2822 Test #2816: ITKv3DeformableRegistration13Test4 ............................................ Passed 5.03 sec 2819/2822 Test #2814: ITKv3DeformableRegistration13Test2 ............................................ Passed 6.64 sec 2820/2822 Test #2813: ITKv3DeformableRegistration13Test1 ............................................ Passed 10.92 sec 2821/2822 Test #2815: ITKv3DeformableRegistration13Test3 ............................................ Passed 6.53 sec Start 351: itkObjectFactoryTest2 2822/2822 Test #351: itkObjectFactoryTest2 ......................................................... Passed 0.03 sec 99% tests passed, 1 tests failed out of 2822 Label Time Summary: ITKAnisotropicSmoothing = 0.65 sec*proc (6 tests) ITKAntiAlias = 0.21 sec*proc (2 tests) ITKBiasCorrection = 3.33 sec*proc (6 tests) ITKBinaryMathematicalMorphology = 2.95 sec*proc (27 tests) ITKBioCell = 0.26 sec*proc (6 tests) ITKClassifiers = 10.54 sec*proc (14 tests) ITKColormap = 1.40 sec*proc (15 tests) ITKCommon = 41.96 sec*proc (191 tests) ITKConnectedComponents = 1.11 sec*proc (15 tests) ITKConvolution = 5.73 sec*proc (34 tests) ITKCurvatureFlow = 1.16 sec*proc (3 tests) ITKDeconvolution = 3.48 sec*proc (16 tests) ITKDeformableMesh = 0.64 sec*proc (5 tests) ITKDenoising = 20.08 sec*proc (7 tests) ITKDeprecated = 5.63 sec*proc (37 tests) ITKDiffusionTensorImage = 0.35 sec*proc (5 tests) ITKDisplacementField = 8.29 sec*proc (21 tests) ITKDistanceMap = 8.78 sec*proc (27 tests) ITKEigen = 0.12 sec*proc (2 tests) ITKFEM = 4.38 sec*proc (71 tests) ITKFEMRegistration = 26.55 sec*proc (7 tests) ITKFFT = 118.11 sec*proc (43 tests) ITKFastMarching = 41.54 sec*proc (32 tests) ITKFiniteDifference = 0.02 sec*proc (1 test) ITKGPUAnisotropicSmoothing = 0.02 sec*proc (1 test) ITKGPUCommon = 0.04 sec*proc (1 test) ITKGPUFiniteDifference = 0.02 sec*proc (1 test) ITKGPUImageFilterBase = 0.02 sec*proc (1 test) ITKGPUPDEDeformableRegistration = 0.02 sec*proc (1 test) ITKGPURegistrationCommon = 0.02 sec*proc (1 test) ITKGPUSmoothing = 0.02 sec*proc (1 test) ITKGPUThresholding = 0.02 sec*proc (1 test) ITKIOBMP = 0.98 sec*proc (13 tests) ITKIOBioRad = 0.13 sec*proc (2 tests) ITKIOCSV = 0.18 sec*proc (4 tests) ITKIOGDCM = 1.31 sec*proc (17 tests) ITKIOGE = 0.86 sec*proc (13 tests) ITKIOGIPL = 0.20 sec*proc (4 tests) ITKIOHDF5 = 0.25 sec*proc (3 tests) ITKIOIPL = 0.04 sec*proc (1 test) ITKIOImageBase = 4.26 sec*proc (74 tests) ITKIOJPEG = 0.28 sec*proc (4 tests) ITKIOLSM = 0.12 sec*proc (2 tests) ITKIOMRC = 0.42 sec*proc (5 tests) ITKIOMesh = 2.83 sec*proc (17 tests) ITKIOMeta = 2.01 sec*proc (39 tests) ITKIONIFTI = 0.92 sec*proc (20 tests) ITKIONRRD = 1.75 sec*proc (31 tests) ITKIOPNG = 0.64 sec*proc (11 tests) ITKIORAW = 0.26 sec*proc (6 tests) ITKIOSiemens = 0.02 sec*proc (1 test) ITKIOSpatialObjects = 0.38 sec*proc (6 tests) ITKIOStimulate = 0.16 sec*proc (3 tests) ITKIOTIFF = 2.67 sec*proc (46 tests) ITKIOTransformBase = 0.16 sec*proc (3 tests) ITKIOTransformHDF5 = 0.49 sec*proc (3 tests) ITKIOTransformInsightLegacy = 0.14 sec*proc (3 tests) ITKIOTransformMatlab = 0.09 sec*proc (2 tests) ITKIOVTK = 0.50 sec*proc (7 tests) ITKIOXML = 1.52 sec*proc (33 tests) ITKImageAdaptors = 0.39 sec*proc (7 tests) ITKImageCompare = 0.43 sec*proc (8 tests) ITKImageCompose = 0.70 sec*proc (12 tests) ITKImageFeature = 43.73 sec*proc (30 tests) ITKImageFilterBase = 0.66 sec*proc (6 tests) ITKImageFunction = 1.81 sec*proc (29 tests) ITKImageFusion = 4.33 sec*proc (24 tests) ITKImageGradient = 1.07 sec*proc (15 tests) ITKImageGrid = 17.14 sec*proc (67 tests) ITKImageIntensity = 9.50 sec*proc (83 tests) ITKImageLabel = 0.52 sec*proc (6 tests) ITKImageNoise = 0.94 sec*proc (9 tests) ITKImageSources = 2.09 sec*proc (15 tests) ITKImageStatistics = 6.47 sec*proc (36 tests) ITKIntegratedTest = 0.60 sec*proc (12 tests) ITKKLMRegionGrowing = 10.28 sec*proc (2 tests) ITKLabelMap = 7.39 sec*proc (109 tests) ITKLabelVoting = 0.51 sec*proc (8 tests) ITKLevelSets = 10.11 sec*proc (28 tests) ITKLevelSetsv4 = 31.59 sec*proc (42 tests) ITKMarkovRandomFieldsClassifiers = 0.10 sec*proc (3 tests) ITKMathematicalMorphology = 23.40 sec*proc (61 tests) ITKMesh = 3.32 sec*proc (56 tests) ITKMetricsv4 = 43.97 sec*proc (37 tests) ITKModular = 1794.69 sec*proc (321 tests) ITKNarrowBand = 0.17 sec*proc (3 tests) ITKNeuralNetworks = 3.40 sec*proc (11 tests) ITKOptimizers = 0.98 sec*proc (19 tests) ITKOptimizersv4 = 2.52 sec*proc (29 tests) ITKPDEDeformableRegistration = 5.93 sec*proc (5 tests) ITKPath = 15.40 sec*proc (18 tests) ITKPolynomials = 0.09 sec*proc (2 tests) ITKQuadEdgeMesh = 1.65 sec*proc (37 tests) ITKQuadEdgeMeshFiltering = 30.37 sec*proc (48 tests) ITKRegionGrowing = 0.57 sec*proc (10 tests) ITKRegistrationCommon = 53.23 sec*proc (65 tests) ITKRegistrationMethodsv4 = 111.97 sec*proc (23 tests) ITKReview = 199.12 sec*proc (98 tests) ITKSignedDistanceFunction = 0.11 sec*proc (3 tests) ITKSmoothing = 1.01 sec*proc (17 tests) ITKSpatialFunction = 0.07 sec*proc (2 tests) ITKSpatialObjects = 1.62 sec*proc (33 tests) ITKStatistics = 8.72 sec*proc (109 tests) ITKTestKernel = 0.13 sec*proc (3 tests) ITKThresholding = 3.60 sec*proc (54 tests) ITKTransform = 7.32 sec*proc (47 tests) ITKTransformFactory = 0.11 sec*proc (2 tests) ITKV3Compatibility = 2.40 sec*proc (15 tests) ITKVTK = 0.02 sec*proc (1 test) ITKVideoCore = 0.65 sec*proc (7 tests) ITKVideoFiltering = 1.59 sec*proc (5 tests) ITKVideoIO = 0.63 sec*proc (4 tests) ITKVoronoi = 0.91 sec*proc (6 tests) ITKWatersheds = 4.04 sec*proc (31 tests) RUNS_LONG = 408.74 sec*proc (43 tests) Total Test time (real) = 354.44 sec The following tests FAILED: 1179 - itkCastImageFilterTest (Failed) Errors while running CTest make[2]: *** [Makefile:144: test] Error 8 make[2]: Leaving directory '/<>/BUILD' dh_auto_test: cd BUILD && make -j8 -Oline test ARGS\+=-j8 returned exit code 2 make[1]: *** [debian/rules:100: override_dh_auto_test] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:84: build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2018-05-02T14:43:34Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 33632984 Build-Time: 27887 Distribution: unstable Fail-Stage: build Host Architecture: amd64 Install-Time: 40 Job: insighttoolkit4_4.12.2-dfsg1-1 Machine Architecture: amd64 Package: insighttoolkit4 Package-Time: 27982 Source-Version: 4.12.2-dfsg1-1 Space: 33632984 Status: attempted Version: 4.12.2-dfsg1-1 -------------------------------------------------------------------------------- Finished at 2018-05-02T14:43:34Z Build needed 07:46:22, 33632984k disk space E: Build failure (dpkg-buildpackage died) DC-Status: Failed 27987.638764088s DC-Time-Estimation: 27987.638764088 versus expected 15004 (r/m: 0.8653451588968274 ; m: 15004.0)